View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6395_low_2 (Length: 734)

Name: NF6395_low_2
Description: NF6395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6395_low_2
NF6395_low_2
[»] chr7 (44 HSPs)
chr7 (13-717)||(21138400-21139101)
chr7 (44-186)||(1433434-1433578)
chr7 (72-186)||(5409771-5409887)
chr7 (74-186)||(9778510-9778624)
chr7 (44-127)||(15902802-15902887)
chr7 (44-186)||(32093954-32094100)
chr7 (26-124)||(25791615-25791714)
chr7 (41-119)||(20549768-20549848)
chr7 (44-126)||(22602705-22602789)
chr7 (51-187)||(21880139-21880272)
chr7 (44-119)||(22484005-22484082)
chr7 (44-127)||(26329376-26329461)
chr7 (59-185)||(32287404-32287527)
chr7 (72-186)||(43027404-43027520)
chr7 (41-118)||(3520345-3520424)
chr7 (65-130)||(5548677-5548744)
chr7 (50-127)||(32308106-32308185)
chr7 (65-130)||(33384573-33384640)
chr7 (45-125)||(21828401-21828483)
chr7 (44-119)||(26733284-26733361)
chr7 (44-186)||(598188-598327)
chr7 (72-126)||(7328686-7328742)
chr7 (51-186)||(7438693-7438836)
chr7 (72-130)||(16341504-16341564)
chr7 (65-119)||(19206051-19206107)
chr7 (44-125)||(5235966-5236049)
chr7 (44-125)||(27945021-27945104)
chr7 (26-119)||(37742485-37742580)
chr7 (56-117)||(38134410-38134473)
chr7 (70-130)||(5233635-5233697)
chr7 (27-119)||(7197299-7197393)
chr7 (75-127)||(17307904-17307958)
chr7 (72-124)||(23128658-23128712)
chr7 (69-117)||(27732243-27732293)
chr7 (27-107)||(29787383-29787464)
chr7 (72-127)||(3142072-3142129)
chr7 (72-119)||(5835255-5835304)
chr7 (49-124)||(6630909-6630986)
chr7 (89-163)||(13770718-13770792)
chr7 (27-114)||(22868006-22868094)
chr7 (44-118)||(2425736-2425812)
chr7 (143-188)||(5307332-5307377)
chr7 (70-136)||(11890904-11890972)
chr7 (137-186)||(28155624-28155673)
[»] chr5 (39 HSPs)
chr5 (27-184)||(43001763-43001922)
chr5 (27-127)||(6035446-6035547)
chr5 (46-135)||(38749549-38749640)
chr5 (29-125)||(3966467-3966566)
chr5 (27-90)||(7175052-7175115)
chr5 (64-184)||(30502330-30502447)
chr5 (64-184)||(30542673-30542790)
chr5 (50-186)||(30098312-30098456)
chr5 (73-163)||(26312778-26312865)
chr5 (50-187)||(31084309-31084448)
chr5 (74-186)||(14873527-14873641)
chr5 (45-125)||(32444747-32444829)
chr5 (69-184)||(23015926-23016043)
chr5 (50-119)||(11685925-11685996)
chr5 (27-116)||(14674232-14674323)
chr5 (44-187)||(19820327-19820473)
chr5 (43-115)||(5467984-5468058)
chr5 (72-132)||(6471878-6471940)
chr5 (50-114)||(12264836-12264902)
chr5 (44-184)||(21190998-21191135)
chr5 (33-124)||(36838512-36838605)
chr5 (27-186)||(39205849-39206004)
chr5 (44-119)||(16203797-16203874)
chr5 (51-88)||(4206313-4206350)
chr5 (44-126)||(15410443-15410527)
chr5 (44-114)||(27144443-27144515)
chr5 (121-186)||(27932289-27932354)
chr5 (65-119)||(28588676-28588732)
chr5 (65-188)||(32766870-32767001)
chr5 (72-121)||(23012408-23012459)
chr5 (51-127)||(18592060-18592138)
chr5 (62-130)||(43208265-43208335)
chr5 (136-186)||(2436980-2437030)
chr5 (27-114)||(9449432-9449521)
chr5 (72-127)||(22423806-22423863)
chr5 (54-121)||(23220973-23221042)
chr5 (67-125)||(17593718-17593778)
chr5 (89-182)||(30098982-30099070)
chr5 (65-119)||(32630737-32630793)
[»] scaffold0050 (1 HSPs)
scaffold0050 (35-183)||(70249-70394)
[»] chr4 (30 HSPs)
chr4 (45-185)||(3947702-3947844)
chr4 (65-186)||(18513175-18513299)
chr4 (50-190)||(36635310-36635453)
chr4 (44-185)||(847931-848080)
chr4 (44-163)||(21945483-21945599)
chr4 (65-112)||(22440609-22440658)
chr4 (50-119)||(35723386-35723458)
chr4 (45-112)||(44796971-44797040)
chr4 (65-119)||(5775360-5775416)
chr4 (63-129)||(15659752-15659820)
chr4 (137-186)||(20633541-20633590)
chr4 (121-186)||(23292926-23292991)
chr4 (66-111)||(903924-903971)
chr4 (65-114)||(3712516-3712567)
chr4 (72-186)||(24613630-24613752)
chr4 (27-130)||(7970484-7970587)
chr4 (51-119)||(33950123-33950193)
chr4 (65-163)||(56049878-56049972)
chr4 (44-127)||(7012046-7012131)
chr4 (63-118)||(16189708-16189765)
chr4 (27-121)||(29205409-29205503)
chr4 (121-187)||(34306743-34306809)
chr4 (44-119)||(40179638-40179715)
chr4 (65-116)||(40613451-40613504)
chr4 (68-127)||(46160900-46160961)
chr4 (65-119)||(8423720-8423776)
chr4 (138-187)||(11931362-11931411)
chr4 (65-113)||(12047396-12047445)
chr4 (50-115)||(20633471-20633535)
chr4 (65-127)||(40742592-40742656)
[»] chr1 (39 HSPs)
chr1 (72-184)||(1486646-1486760)
chr1 (27-125)||(6427314-6427413)
chr1 (27-119)||(52903212-52903306)
chr1 (44-119)||(9709800-9709877)
chr1 (24-186)||(46348323-46348482)
chr1 (63-185)||(10233252-10233374)
chr1 (65-121)||(1864880-1864938)
chr1 (44-186)||(9690213-9690351)
chr1 (35-119)||(36878432-36878518)
chr1 (70-173)||(6612113-6612224)
chr1 (48-121)||(13997867-13997942)
chr1 (27-184)||(29163323-29163476)
chr1 (74-127)||(44482240-44482295)
chr1 (72-188)||(34712321-34712434)
chr1 (52-130)||(20157341-20157421)
chr1 (27-186)||(37598794-37598950)
chr1 (65-119)||(38503321-38503377)
chr1 (72-125)||(7918207-7918262)
chr1 (51-124)||(10572586-10572661)
chr1 (74-127)||(25361896-25361951)
chr1 (50-127)||(40285648-40285727)
chr1 (51-186)||(19562556-19562693)
chr1 (27-90)||(23653318-23653380)
chr1 (44-119)||(25452152-25452227)
chr1 (44-119)||(5898268-5898345)
chr1 (44-127)||(17754291-17754376)
chr1 (44-115)||(22794084-22794157)
chr1 (64-119)||(28674800-28674857)
chr1 (65-124)||(34371715-34371775)
chr1 (50-125)||(36905983-36906060)
chr1 (72-163)||(40181879-40181967)
chr1 (44-114)||(398772-398844)
chr1 (45-119)||(2896123-2896199)
chr1 (43-121)||(14332388-14332467)
chr1 (50-148)||(15323149-15323249)
chr1 (53-119)||(31667414-31667482)
chr1 (121-186)||(32461393-32461458)
chr1 (71-185)||(40258874-40258985)
chr1 (121-186)||(51410079-51410144)
[»] chr6 (43 HSPs)
chr6 (44-127)||(34073341-34073426)
chr6 (50-119)||(7265595-7265666)
chr6 (44-184)||(12696304-12696446)
chr6 (78-186)||(17327590-17327700)
chr6 (27-186)||(28152062-28152217)
chr6 (44-115)||(13851716-13851789)
chr6 (44-130)||(7086775-7086863)
chr6 (72-130)||(9025485-9025545)
chr6 (44-130)||(9027158-9027246)
chr6 (44-185)||(9658859-9658998)
chr6 (44-177)||(3398599-3398733)
chr6 (50-119)||(5732512-5732583)
chr6 (50-119)||(7996380-7996451)
chr6 (50-119)||(8022350-8022421)
chr6 (63-116)||(30866149-30866204)
chr6 (67-119)||(9617437-9617491)
chr6 (72-119)||(30851610-30851657)
chr6 (72-188)||(34595142-34595255)
chr6 (72-147)||(24138434-24138511)
chr6 (65-119)||(7377980-7378036)
chr6 (73-119)||(9629392-9629440)
chr6 (74-156)||(13364675-13364754)
chr6 (65-119)||(19040353-19040409)
chr6 (27-92)||(677798-677865)
chr6 (50-125)||(21395304-21395380)
chr6 (63-119)||(31579229-31579285)
chr6 (65-126)||(32320664-32320727)
chr6 (65-109)||(5462687-5462733)
chr6 (136-195)||(7625185-7625244)
chr6 (72-124)||(9195751-9195805)
chr6 (44-124)||(10294087-10294169)
chr6 (44-124)||(25038068-25038150)
chr6 (45-92)||(34447389-34447436)
chr6 (50-186)||(10770607-10770747)
chr6 (51-126)||(15443682-15443759)
chr6 (44-119)||(20371112-20371189)
chr6 (72-119)||(21924937-21924986)
chr6 (76-127)||(26562701-26562754)
chr6 (27-124)||(28862084-28862184)
chr6 (65-119)||(14721242-14721298)
chr6 (52-114)||(17341671-17341735)
chr6 (116-185)||(31384979-31385048)
chr6 (72-186)||(33001229-33001340)
[»] scaffold0110 (1 HSPs)
scaffold0110 (65-131)||(28851-28919)
[»] chr2 (33 HSPs)
chr2 (27-187)||(37558940-37559097)
chr2 (54-121)||(39279665-39279734)
chr2 (42-115)||(37411250-37411325)
chr2 (47-119)||(18276504-18276578)
chr2 (43-163)||(18570952-18571068)
chr2 (65-124)||(44860321-44860382)
chr2 (44-162)||(30527554-30527674)
chr2 (44-114)||(35449493-35449565)
chr2 (27-120)||(44605140-44605235)
chr2 (53-125)||(18420430-18420504)
chr2 (137-187)||(10535684-10535734)
chr2 (52-123)||(14268731-14268804)
chr2 (44-107)||(28412330-28412395)
chr2 (44-118)||(23718006-23718082)
chr2 (44-118)||(24105678-24105754)
chr2 (121-186)||(37419808-37419873)
chr2 (101-186)||(41843480-41843565)
chr2 (121-181)||(12224277-12224337)
chr2 (44-113)||(21616742-21616813)
chr2 (47-108)||(23921236-23921299)
chr2 (65-125)||(24975321-24975383)
chr2 (67-119)||(34691807-34691861)
chr2 (67-119)||(34714219-34714273)
chr2 (44-124)||(36756341-36756423)
chr2 (72-119)||(5367200-5367249)
chr2 (62-92)||(22084863-22084893)
chr2 (121-187)||(24009349-24009415)
chr2 (124-194)||(26769579-26769649)
chr2 (65-120)||(28121550-28121607)
chr2 (31-106)||(39323231-39323308)
chr2 (90-127)||(22550246-22550283)
chr2 (90-127)||(35056896-35056933)
chr2 (65-119)||(42832278-42832334)
[»] scaffold0008 (1 HSPs)
scaffold0008 (44-127)||(263366-263451)
[»] chr3 (27 HSPs)
chr3 (27-193)||(20503429-20503591)
chr3 (30-90)||(6525713-6525773)
chr3 (72-184)||(29508452-29508567)
chr3 (27-186)||(40993275-40993431)
chr3 (63-127)||(8039829-8039895)
chr3 (44-115)||(11658795-11658868)
chr3 (65-127)||(16192744-16192808)
chr3 (63-186)||(17005548-17005679)
chr3 (89-186)||(27505273-27505370)
chr3 (41-130)||(25948878-25948969)
chr3 (56-162)||(7948950-7949059)
chr3 (27-119)||(22774072-22774166)
chr3 (44-119)||(8383237-8383314)
chr3 (55-114)||(32804547-32804608)
chr3 (27-114)||(37077321-37077410)
chr3 (65-119)||(7928451-7928507)
chr3 (53-131)||(18267995-18268075)
chr3 (72-184)||(28918009-28918120)
chr3 (89-186)||(35222965-35223057)
chr3 (136-184)||(25775576-25775624)
chr3 (72-129)||(49651778-49651837)
chr3 (44-186)||(5440967-5441110)
chr3 (65-121)||(24633401-24633459)
chr3 (135-186)||(40052380-40052431)
chr3 (72-119)||(20691327-20691376)
chr3 (44-119)||(25093482-25093559)
chr3 (121-186)||(55401129-55401194)
[»] chr8 (30 HSPs)
chr8 (45-184)||(44067497-44067644)
chr8 (27-119)||(14134662-14134756)
chr8 (47-119)||(20679397-20679471)
chr8 (27-186)||(36450694-36450850)
chr8 (65-127)||(4611535-4611599)
chr8 (29-119)||(13844598-13844689)
chr8 (50-119)||(4786340-4786411)
chr8 (50-115)||(34897071-34897138)
chr8 (72-185)||(29447040-29447161)
chr8 (27-90)||(31109551-31109614)
chr8 (65-124)||(11803260-11803321)
chr8 (65-124)||(11927083-11927144)
chr8 (72-119)||(12606831-12606880)
chr8 (44-127)||(24362196-24362281)
chr8 (44-119)||(24669413-24669490)
chr8 (44-119)||(28384996-28385073)
chr8 (72-118)||(31236580-31236628)
chr8 (72-121)||(7658471-7658522)
chr8 (90-125)||(4122245-4122280)
chr8 (72-116)||(27213555-27213601)
chr8 (70-186)||(33405324-33405437)
chr8 (51-162)||(41831899-41832012)
chr8 (65-124)||(11944666-11944727)
chr8 (104-186)||(16641909-16641991)
chr8 (64-119)||(33382021-33382078)
chr8 (64-114)||(8798838-8798890)
chr8 (47-92)||(12124091-12124136)
chr8 (45-90)||(13018262-13018307)
chr8 (89-186)||(24858039-24858135)
chr8 (121-186)||(34450961-34451026)
[»] scaffold0022 (2 HSPs)
scaffold0022 (44-115)||(90823-90896)
scaffold0022 (50-125)||(99879-99956)
[»] scaffold0306 (1 HSPs)
scaffold0306 (72-184)||(13408-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (72-184)||(21804-21919)
[»] scaffold0128 (1 HSPs)
scaffold0128 (27-119)||(32659-32751)
[»] scaffold0036 (1 HSPs)
scaffold0036 (72-124)||(9744-9798)
[»] scaffold0361 (1 HSPs)
scaffold0361 (121-187)||(14581-14647)
[»] scaffold0320 (1 HSPs)
scaffold0320 (65-120)||(17037-17094)
[»] scaffold0053 (1 HSPs)
scaffold0053 (44-195)||(8778-8926)
[»] scaffold0123 (1 HSPs)
scaffold0123 (65-127)||(44519-44583)
[»] scaffold0020 (2 HSPs)
scaffold0020 (72-130)||(135303-135363)
scaffold0020 (136-186)||(135263-135313)
[»] scaffold0007 (1 HSPs)
scaffold0007 (44-184)||(225199-225347)
[»] scaffold0003 (1 HSPs)
scaffold0003 (121-193)||(241659-241731)
[»] scaffold0085 (1 HSPs)
scaffold0085 (43-115)||(26372-26446)
[»] scaffold1528 (1 HSPs)
scaffold1528 (44-127)||(1015-1100)
[»] scaffold0376 (1 HSPs)
scaffold0376 (72-119)||(6320-6369)
[»] scaffold0168 (1 HSPs)
scaffold0168 (44-127)||(21023-21108)
[»] scaffold0027 (1 HSPs)
scaffold0027 (50-88)||(145906-145944)
[»] scaffold0044 (1 HSPs)
scaffold0044 (73-127)||(53189-53245)
[»] scaffold0004 (1 HSPs)
scaffold0004 (50-124)||(92793-92869)


Alignment Details
Target: chr7 (Bit Score: 650; Significance: 0; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 650; E-Value: 0
Query Start/End: Original strand, 13 - 717
Target Start/End: Complemental strand, 21139101 - 21138400
Alignment:
Q  13 aatatcacaagctatatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatcataattcactgtaattatatgtg 112  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21139101 aatatcacaagctat--gaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatcataatt-actgtaattatatgtg 21139005  T
Q  113 tcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatagatcacaactgcaattgcggccacatt 212  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21139004 tcggtgtcgtgtcggacatgatacgtgtccgacaccaggacacgcttaatcaagggagtgttcgtgcttcatagatcacaactgcaattgcggccacatt 21138905  T
Q  213 tttcgcaatatatgtaggttcacagcgttgctgcgactaccattacggccacatattagaaccatgacataaacactagaaatatatgaagcttgataat 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  21138904 tttcgcaatatatgtaggttcacagcgttgctgcgactaccattacgaccacatattagaaccatgacataaacactagaaacatacgaagcttgataat 21138805  T
Q  313 ctatgcattttatttttatcttattaaactatgaaactaacatttactaaaatatattcttgaaaacaaaacagtcatatccagtattcaaggacccaca 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21138804 ctatgcattttatttttatcttattaaactatgaaactaacatttactaaaatatattcttgaaaacaaaacagtcatatccagtattcaaggacccaca 21138705  T
Q  413 aagatatccagaattagcagatccaaaacttgaaggaaactttccaatgagatcattacatcaagcagtggcagtagcagctatgtgtctaaatgaagaa 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21138704 aagatatccagaattagcagatccaaaacttgaaggaaactttccaatgagatcattacatcaagcagtggcagtagcagctatgtgtctaaatgaagaa 21138605  T
Q  513 ccatcagtgagaccattgataagtgatgttgtaacagctcttagtttccttggaatagatccaatgaatcaagatccacagcttttgtcaccaattgaca 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  21138604 ccatcagtgagaccattgataagtgatgttgtaacagctcttagtttccttggaatagatccaatgaatcaagatccacaagttttgtcaccaattgaca 21138505  T
Q  613 tgccatcaccaacacaaaagaatgaagaaagtagtgcaaccttgagtcttctcgacgatgatagtgccattgaacgccaaaaagccgttgatgaagccat 712  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21138504 tgccatcaccaacacaaaagaatgaagaaagtagtgcaaccttgagtcttctcgacgatgatagtgccgttgaacgccaaaaagccgttgatgaagccat 21138405  T
Q  713 ggaat 717  Q
    |||||    
T  21138404 ggaat 21138400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 1433434 - 1433578
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    ||||| |||| ||||| | | |||||||||||||||||||||||||| |  |||   ||||||||||||||||||||| |||||||||| || | |||||    
T  1433434 gacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtc 1433533  T
Q  142 agacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
     |||||||||||||| ||||||   ||||||| ||||||||||||    
T  1433534 cgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 5409887 - 5409771
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggga 169  Q
    ||||||||||| |||||||  ||||||| || ||||| | |||||||||| |||||||||| || ||||||| |||||| ||||||||||||||   |||    
T  5409887 taataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagga 5409788  T
Q  170 gtgttcgtgcttcatag 186  Q
    |||| ||||||||||||    
T  5409787 gtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 9778510 - 9778624
Alignment:
Q  74 ataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagt 171  Q
    ||||||||| |||||||  ||||||| | |||||| | |||||||||| ||||||||||  | ||||||| |||||| |||||||||||||| | |||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagt 9778609  T
Q  172 gttcgtgcttcatag 186  Q
    || ||||||||||||    
T  9778610 gtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 15902802 - 15902887
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||||||||||||| | |||||  ||||||||||| |||||||  ||||| | |||||||||||||||||||||||||||||    
T  15902802 gacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcgg 15902887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 32094100 - 32093954
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat---cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgt 140  Q
    |||||| ||||| ||||| ||||||   ||||||||||| ||||    ||||||||| |||||||| |  ||||||||| |||||||||| || ||||||    
T  32094100 gacacaaacactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacgacacgtgt 32094001  T
Q  141 cagacaccagg-acacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    | |||||| || ||||||||||||   ||||||||||||||||||||    
T  32094000 ccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 25791615 - 25791714
Alignment:
Q  26 atatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatcata-attcactgtaattatatgtgtcggtgttgtgt 124  Q
    ||||||||||||||||| |||||||||||||||| | | |||||| |||| |||||||||| ||| | | ||| |||| |||||||||||||||| ||||    
T  25791615 atatgaagcacggatacggacacagacactgacacgccgacaccgctaattatttgagaaattcacataatcaatgtagttatatgtgtcggtgtcgtgt 25791714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 20549768 - 20549848
Alignment:
Q  41 acagacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||| |||||||||   | |||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  20549768 acagacacatacactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgt 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 22602789 - 22602705
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcg 126  Q
    ||||||| |||||||| | | ||||||| ||| ||||||||||||||  ||||||| ||||||||||||||||||||| ||||||    
T  22602789 gacacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 21880139 - 21880272
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacacc 148  Q
    ||||| ||||||  ||| || |||||||||||||||||  ||||||||| |||||||| | ||||||||||     |||||| || || |||| ||||||    
T  21880139 acactaacatgtggacatcgctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgt-----cggacacgacacatgtccgacacc 21880233  T
Q  149 aggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
    |||||||||||||||   | ||||| |||||||||||||    
T  21880234 aggacacgcctaatccgagaagtgtccgtgcttcataga 21880272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 22484005 - 22484082
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||| | | |||||| ||||||||| |||||||  ||||||||| | |||||||||||||||||||    
T  22484005 gacacagacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 26329461 - 26329376
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaa--tcataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||||||||||| | | ||| |||||||||||||||||||   || |||||| |||||||||||||||||| || |||||||    
T  26329461 gacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcgg 26329376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 32287527 - 32287404
Alignment:
Q  59 atgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacg 156  Q
    ||||| |||||| ||||||| |||||||||||  ||||||| || || |||||||||||||||     ||||||||| | ||||| |||||| ||||||     
T  32287527 atgtcgacaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgt-----cggacatgacaagtgtccgacaccgggacaca 32287433  T
Q  157 cctaatcaagggagtgttcgtgcttcata 185  Q
    |||||||   ||||||| |||||||||||    
T  32287432 cctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 43027520 - 43027404
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggga 169  Q
    ||||||||||| |||||||  |||| || ||||| || | |||||||||| ||||| |||| || ||||||| |||||| ||||||||||||||    ||    
T  43027520 taataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatga 43027421  T
Q  170 gtgttcgtgcttcatag 186  Q
    |||| ||||||||||||    
T  43027420 gtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 3520424 - 3520345
Alignment:
Q  41 acagacacagacactgacatgtcaacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtg 118  Q
    ||||||||||||| ||||| |   |||||| |||| ||||||||||||||||  ||||| ||||||||||||||||||||    
T  3520424 acagacacagacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 5548677 - 5548744
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    |||||| | |||||||||||||||||  ||||||| |||||||||||||||| |||| ||||||||||    
T  5548677 acaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcggaca 5548744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 32308106 - 32308185
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||||| | | |||||| |||||||||||||||||  ||||||||| ||||||| |||||||| |||| |||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcgg 32308185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 33384640 - 33384573
Alignment:
Q  65 acaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    |||||||||||||| ||||||||||  |||||| | ||||||||||||||| ||||| ||||||||||    
T  33384640 acaccgttaataatctgagaaaatcctataatttagtgtaattatatgtgttggtgtggtgtcggaca 33384573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 21828483 - 21828401
Alignment:
Q  45 acacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    |||| |||||||||| | | ||||||||| ||||||||||||||  |||||| || ||||||| |||||||| ||||||||||    
T  21828483 acacggacactgacacgccgacaccgttagtaatttgagaaaatcacataatccattgtaattgtatgtgtcagtgttgtgtc 21828401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 26733284 - 26733361
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||||||||| ||| |||||| ||||||||||| |||||  ||||||||| | |||||| ||||||||||||    
T  26733284 gacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgt 26733361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 598188 - 598327
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    ||||| ||||||||||  || |||||| ||||||||| |||||||||  ||||| | ||||||| || ||||||||||     | |||| || |||||||    
T  598188 gacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgt-----cagacacgacacgtgtc 598282  T
Q  142 agacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
     |||||| ||||||||||||||   | ||||| ||||||||||||    
T  598283 cgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 7328742 - 7328686
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcg 126  Q
    |||||||||||||||||  ||||||| | ||||||||||||||||||||| ||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 7438693 - 7438836
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg------acatgatacgtgtca 142  Q
    ||||||||||| | |||| ||||||||||||| |||||  ||||||||| |||||||| | ||||||||||  ||||||      ||| || || |||      
T  7438693 acactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgc 7438792  T
Q  143 gacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||| ||||||||||||||  | ||||||| ||||||||||||    
T  7438793 gacactaggacacgcctaattcaaggagtgtccgtgcttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 16341504 - 16341564
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    |||||||||||||||||||  ||||| | |||||||||||||| |||||| ||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcggaca 16341564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 19206051 - 19206107
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||| |||||||||||||||||||  ||||||| | |||||||||||||||||||    
T  19206051 acaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 5235966 - 5236049
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    |||||||||||||||| ||| |||||| ||||||||| |||||||   |||||| | ||||||||||| | ||||||| |||||    
T  5235966 gacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattatatatatcggtgtcgtgtc 5236049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 27945021 - 27945104
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    ||||| |||||||||| | | |||||  |||||||||||||||||  ||||||||| |||||||| | |||||||||| |||||    
T  27945021 gacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 37742485 - 37742580
Alignment:
Q  26 atatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaa--tcataattcactgtaattatatgtgtcggtgt 119  Q
    ||||||| ||||||||||||||| ||||||| || | | |||||  ||||||||| | ||||  |||| ||||| |||||| ||||||||||||||    
T  37742485 atatgaaacacggatacagacacggacactgccacgccgacaccactaataatttaacaaaatttcatgattcaatgtaataatatgtgtcggtgt 37742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 38134473 - 38134410
Alignment:
Q  56 gacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggt 117  Q
    |||||||  |||||| |||||||||||||||||  ||||||||| |||||| ||||||||||||    
T  38134473 gacatgttgacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 5233635 - 5233697
Alignment:
Q  70 gttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    |||||||||||||||||||||  ||||  | ||||||||||||||| ||||||||||| ||||    
T  5233635 gttaataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtccgaca 5233697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 7197393 - 7197299
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||||||||||  ||||||||| ||||| | | |||| | ||||||||| | |||||||  ||||||| |||||||| | ||||||||||    
T  7197393 tatgaagcacggatacgaacacagacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgt 7197299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 17307904 - 17307958
Alignment:
Q  75 taatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||||||||||  ||||||||| ||||||||||||||| ||||| |||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtcgg 17307958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 23128712 - 23128658
Alignment:
Q  72 taataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||| ||||  ||||| |||||| |||||||||||||||||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgt 23128658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 27732293 - 27732243
Alignment:
Q  69 cgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggt 117  Q
    |||||||||||| |||||||  ||||||||| |||||||||||||||||||    
T  27732293 cgttaataatttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 29787464 - 29787383
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattat 107  Q
    ||||||||||||||||| |||| |||| | ||| | | |||||| |||||||||||||||||  ||||||||| |||||||||    
T  29787464 tatgaagcacggataca-acacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 3142129 - 3142072
Alignment:
Q  72 taataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||| ||||| ||||||||  ||||| |||||| ||||||||||||||||||||||    
T  3142129 taataaattgagtaaatcatataattcaatgtaatcatatgtgtcggtgttgtgtcgg 3142072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 5835255 - 5835304
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||||||||||  ||||||||| |||||||||||||||||||||    
T  5835255 taatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgt 5835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 6630986 - 6630909
Alignment:
Q  49 agacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    ||||||||||| | | |||||  ||||||||||||||| |||  ||||||| ||||||||||||||||| ||| ||||    
T  6630986 agacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgt 6630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 13770718 - 13770792
Alignment:
Q  89 cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatc 163  Q
    ||||||||| |||||||| | |||||| ||| ||||||||||  | ||||||| |||||| | ||||||||||||    
T  13770718 cataattcagtgtaattacaagtgtcgttgtcgtgtcggacacaacacgtgtccgacaccggaacacgcctaatc 13770792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 22868006 - 22868094
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtc 114  Q
    |||||| |||||| ||| |||| |||||||||| | | |||||  ||||||| |||||||||||  ||||||| ||||||||||||||||    
T  22868006 tatgaaacacggacaca-acaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 2425812 - 2425736
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtg 118  Q
    |||||||| ||||||| | |  |||||||||||||||||||||||  ||||||| | || || ||||||||||||||    
T  2425812 gacacagatactgacacgccggcaccgttaataatttgagaaaatcacataattaagtggaactatatgtgtcggtg 2425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 5307332 - 5307377
Alignment:
Q  143 gacaccaggacacgcctaatcaagggagtgttcgtgcttcatagat 188  Q
    ||||| ||||||||||||||| | ||||||| ||||||||||||||    
T  5307332 gacactaggacacgcctaatccaaggagtgtacgtgcttcatagat 5307377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 11890972 - 11890904
Alignment:
Q  70 gttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgtcggacatgatac 136  Q
    ||||||||||||| ||||||  |||||||| |||||||||  |||| ||||| |||||||||| |||||    
T  11890972 gttaataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcgtgtcggacacgatac 11890904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 28155624 - 28155673
Alignment:
Q  137 gtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||| ||||||||||||||||||||| | ||| ||| ||||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcatag 28155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 6e-33; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 43001763 - 43001922
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||| |||||  ||||||||| |||||||| | |||| |||| |||||    
T  43001763 tatgaagcacggatacggacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgt 43001862  T
Q  125 cggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcat 184  Q
    |||||| || |||||||| ||||| ||||||||||||||   ||||||| ||||||||||    
T  43001863 cggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 6035446 - 6035547
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaa-atcataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    ||||||||||||||| ||||| ||||||||||| | | |||||| ||||||||||||||| |  |||||||| ||||||||||| ||||||||| |||||    
T  6035446 tatgaagcacggatatagacaaagacactgacacgccgacaccgctaataatttgagaaataatataattcagtgtaattatatttgtcggtgtcgtgtc 6035545  T
Q  126 gg 127  Q
    ||    
T  6035546 gg 6035547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 38749640 - 38749549
Alignment:
Q  46 cacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgata 135  Q
    |||| |||| |||||||| |||||| ||||||||||| |||||  ||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  38749640 cacaaacacggacatgtcgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcggacacgata 38749549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 3966467 - 3966566
Alignment:
Q  29 tgaagcacggatacagacacag-acactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    ||||||||||| || ||||| | ||||||||||| | |||||| |||||||||||||||||  || |||||| ||||||||||||||||||||| |||||    
T  3966467 tgaagcacggacacggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtc 3966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 7175115 - 7175052
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca 90  Q
    ||||||||| |||||||||||| ||||||||||  || ||||||||||||||||||||||||||    
T  7175115 tatgaagcatggatacagacacggacactgacacatcgacaccgttaataatttgagaaaatca 7175052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 30502447 - 30502330
Alignment:
Q  64 aacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaa 161  Q
    ||||||| |||||||||||||||||||  ||||||| |||||||||||||||||     |||||||||| || || |||| |||||  ||||| ||||||    
T  30502447 aacaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacactgggacatgcctaa 30502353  T
Q  162 tcaagggagtgttcgtgcttcat 184  Q
    || | ||| ||||||||||||||    
T  30502352 tccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 30542790 - 30542673
Alignment:
Q  64 aacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaa 161  Q
    ||||||| |||||||||||||||||||  ||||||| |||||||||||||||||     |||||||||| || || |||| |||||  ||||| ||||||    
T  30542790 aacaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacactgggacatgcctaa 30542696  T
Q  162 tcaagggagtgttcgtgcttcat 184  Q
    || | ||| ||||||||||||||    
T  30542695 tccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 30098312 - 30098456
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttg------tgtcggacatgatacgtgtc 141  Q
    |||||||||| | | | ||||||||||||||||||||||||  ||||||| ||||||||||  ||||||| | |      ||||||||| || |||||||    
T  30098312 gacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtc 30098411  T
Q  142 agacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||||||| |||||||   ||| ||| ||||||||||||    
T  30098412 agacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 26312778 - 26312865
Alignment:
Q  73 aataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatc 163  Q
    ||||||||||||||||||  ||||||| ||||||||||||| |||||||     |||||| |||||||||| ||||||||||||| |||||||    
T  26312778 aataatttgagaaaatcaattaattcagtgtaattatatgtatcggtgt-----cggacacgatacgtgtctgacaccaggacacacctaatc 26312865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 31084309 - 31084448
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacac 147  Q
    |||||||||| | | |||| | ||||||||||| |||||  ||||||||| |||||||| | |||||| ||| |||||||||| || ||||||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacac 31084408  T
Q  148 caggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
      ||||| ||||||||   ||||||| |||| ||||||||    
T  31084409 tgggacatgcctaatccgaggagtgtccgtggttcataga 31084448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 14873527 - 14873641
Alignment:
Q  74 ataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagt 171  Q
    |||||||||||||| ||  ||||| | |||||||||||||||||||||  ||||||||   | |||||||  ||||| ||||||||||||||   |||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagt 14873626  T
Q  172 gttcgtgcttcatag 186  Q
    || ||||||||||||    
T  14873627 gtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 32444747 - 32444829
Alignment:
Q  45 acacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    ||||||||||||||| ||||||||| |||| |||||||||| ||  ||||||||| |||||| | |||||||||||| |||||    
T  32444747 acacagacactgacacgtcaacaccattaacaatttgagaagatgacataattcaatgtaatcaaatgtgtcggtgtcgtgtc 32444829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 23016043 - 23015926
Alignment:
Q  69 cgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaag 166  Q
    ||||||| ||||||||||||||  ||||||| |||||||||| |||||| |||||| ||||||| || | ||||| ||||   ||||||||||||||       
T  23016043 cgttaatcatttgagaaaatcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccga 23015944  T
Q  167 ggagtgttcgtgcttcat 184  Q
    ||||||| || |||||||    
T  23015943 ggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 11685925 - 11685996
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||| | |||||| ||||||||||||||| |  ||||||| | |||||||||||||||||||||    
T  11685925 gacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgt 11685996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 14674232 - 14674323
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcgg 116  Q
    |||||||||||||||||||||| |||||||||| | | |||| | ||||||||||| |||||  ||||||| | |||||||| | |||||||    
T  14674232 tatgaagcacggatacagacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 19820473 - 19820327
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatcataattcactgtaattatatgtgtcggtgttg------tgtcggacatgatacg 137  Q
    ||||| ||||||||||   | |||||| |||||||||||||||||||||||| | |  ||||||| |||||||||| |      ||||||||| ||        
T  19820473 gacacggacactgacactccgacaccgctaataatttgagaaaatcataattaagtacaattataagtgtcggtgtcggacacctgtcggacacga---c 19820377  T
Q  138 tgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
    |||| |||||| |||||||||||||||  ||||||| |||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcataga 19820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 5468058 - 5467984
Alignment:
Q  43 agacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcg 115  Q
    ||||| ||||||||||| ||||| |||| ||||||||||| |||||  ||||||||| |||||||||| ||||||    
T  5468058 agacatagacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaattataggtgtcg 5467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 6471940 - 6471878
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatg 132  Q
    |||||||||||||||||||  ||||||| ||||||||||||||| ||||| |||| |||||||    
T  6471940 taataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgtgggacatg 6471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 12264902 - 12264836
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    |||||||||||| |||||||| |||| ||||||||||||  ||| ||||| ||||||||||||||||    
T  12264902 gacactgacatgccaacaccgctaattatttgagaaaattacatgattcagtgtaattatatgtgtc 12264836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 21191135 - 21190998
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    ||||| |||||||||||| | |||| | ||||||||||| |||||||  ||||||| |||||||| | ||||||||||     ||||||  | |||||||    
T  21191135 gacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt-----cggacacaacacgtgtc 21191041  T
Q  142 agacaccaggacacgcctaatcaagggagtgttcgtgcttcat 184  Q
     ||| || ||||||||||||||   ||||||| ||||||||||    
T  21191040 cgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 36838512 - 36838605
Alignment:
Q  33 gcacggatacagacacagacact-gacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||| |||| ||||||| |||| | || ||||| |||||||||||||||||  ||||||| | ||||||||||||||||||||| ||||    
T  36838512 gcacggataccgacagagacactagacacgaca-caccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 39205849 - 39206004
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||||||||| |||||      ||| |||| | ||||||||||||||||||  ||||||   ||||||||||||||| ||||| ||||    
T  39205849 tatgaagcacggatacagacacggacac------gtcgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgt 39205942  T
Q  125 cggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    | |||| || ||||| | |||||| ||| |||  ||||| | |||||||   ||||||||||    
T  39205943 ccgacacgacacgtgcccgacaccgggatacgtttaatccaaggagtgtctatgcttcatag 39206004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 16203874 - 16203797
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||||| ||||| | |||| | ||||||||||||||||||  |||||| | |||||||||||||||||||||    
T  16203874 gacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgt 16203797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 4206313 - 4206350
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaat 88  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  4206313 acactgacacgtcaacaccgttaataatttgagaaaat 4206350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 15410527 - 15410443
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcg 126  Q
    ||||| |||||||||| | | |||||| ||||||||| ||||||| |||  ||||| |||||| |||||||| ||||||||||||    
T  15410527 gacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgttgtgtcg 15410443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 27144443 - 27144515
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    |||||||||||||||| | | |||||| |||||||||||| ||||  ||||||| | ||||||||||||||||    
T  27144443 gacacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 27932289 - 27932354
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||| || ||||||| ||||||||||||||||||||    |||||||| |||||||||||    
T  27932289 gtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 28588732 - 28588676
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||| |||||||||||||||||  ||||||||| |||||||||| ||||||||||    
T  28588732 acaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 28588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 188
Target Start/End: Complemental strand, 32767001 - 32766870
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg------acatgatacgtgtcagacaccaggacacg 156  Q
    |||||| |||||||||||||||||  || |||||| |||||||||||||||  |||| |||||||      | | || ||||||| |||||||||| |||    
T  32767001 acaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacg 32766902  T
Q  157 cctaatcaagggagtgttcgtgcttcatagat 188  Q
     ||||||   ||||||| ||||||||||||||    
T  32766901 tctaatctgaggagtgtccgtgcttcatagat 32766870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 23012459 - 23012408
Alignment:
Q  72 taataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttg 121  Q
    |||||||||||||||||||||  ||| | |||||||||||||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttg 23012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 18592060 - 18592138
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||| ||| | |||||| ||||| ||| |||||||  ||||||||| |||||||||||||| |||||| |||||||    
T  18592060 acactgatatgccgacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcgg 18592138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 43208335 - 43208265
Alignment:
Q  62 tcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    ||||||||| || ||||||||||||||  ||||||||| |||||| |||| |||| |||||||||| ||||    
T  43208335 tcaacaccgatagtaatttgagaaaatgacataattcaatgtaatcatatctgtctgtgttgtgtcagaca 43208265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 2436980 - 2437030
Alignment:
Q  136 cgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||| ||||||| |||||||||||||   ||||||||||||||||||||    
T  2436980 cgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatag 2437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 9449432 - 9449521
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    ||||||||||| |||| ||||| ||||||| || | | |||||  |||||||||||||||||  ||||||||| ||||| ||| ||||||    
T  9449432 tatgaagcacgaataccgacacggacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgtaactatttgtgtc 9449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 22423863 - 22423806
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||||||||||||  ||||||||| | ||||||||| ||||||||| |||||||    
T  22423863 taataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcgg 22423806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 23220973 - 23221042
Alignment:
Q  54 ctgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttg 121  Q
    |||||||||| |||||| ||||||||||| |||||  ||||||| | ||| || ||||||||||||||||    
T  23220973 ctgacatgtcgacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcggtgttg 23221042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 17593778 - 17593718
Alignment:
Q  67 accgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    |||| |||||||||||||||||||  ||||||| ||||||||||| ||| |||| ||||||    
T  17593778 accgctaataatttgagaaaatcacgtaattcagtgtaattatatatgttggtggtgtgtc 17593718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 30099070 - 30098982
Alignment:
Q  89 cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttc 182  Q
    ||||||||  |||||||||||||||||||||     |||| | || ||||||| |||||  |||||||||| ||| | ||||||||||||||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgt-----cggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 32630793 - 32630737
Alignment:
Q  65 acaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgt 119  Q
    |||||| ||||||||||||||||| |||  ||||| |||||||||||||||| ||||    
T  32630793 acaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgt 32630737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 35 - 183
Target Start/End: Original strand, 70249 - 70394
Alignment:
Q  35 acggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatg 132  Q
    ||||| ||| |||||||||| |||||||| |||| ||||||||||||| |||||  ||||||||| |||||||||| ||||||     |||||||||| |    
T  70249 acggacacaaacacagacacagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcg-----gtgtcggacacg 70343  T
Q  133 atacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttca 183  Q
    | ||||||| |||||||||||| ||||||||    ||||||||||||||||    
T  70344 acacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 8e-23; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 3947844 - 3947702
Alignment:
Q  45 acacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtca 142  Q
    |||||||||| |||||| | |||| | ||||||||||| ||||||  |||||||| |||||||| | ||||| |||| |||||||||| || |||||||     
T  3947844 acacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtcc 3947745  T
Q  143 gacaccaggacacgcctaatcaagggagtgttcgtgcttcata 185  Q
    ||||||||||||| |||||||   ||||||| |||||||||||    
T  3947744 gacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 18513299 - 18513175
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggaca-tgatacgtgtcagacaccaggacacgcctaa 161  Q
    |||||| |||||||||||||||||  ||||||||| |||||| ||||||||| |||||||||||||||  ||   ||||| |||||||||||||||||||    
T  18513299 acaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgtcggacaccgacgtgtgtccgacaccaggacacgcctaa 18513200  T
Q  162 tcaagggagtgttcgtgcttcatag 186  Q
    ||   ||||||| ||||||||||||    
T  18513199 tctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 36635310 - 36635453
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt-tgtgtcggacatgatacgtgtcagaca 146  Q
    |||||||||| | |||||||  |||||||||||||||||  ||||||||| |||||||||||||||  ||||  ||||| |||| || ||| ||||||||    
T  36635310 gacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacgcgtcagaca 36635409  T
Q  147 ccaggacacgcctaatcaagggagtgttcgtgcttcatagatca 190  Q
    || ||||||||||||||    |||||| ||||||||||||||||    
T  36635410 ccgggacacgcctaatccgaagagtgtccgtgcttcatagatca 36635453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 847931 - 848080
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtg------ttgtgtcggacatgata 135  Q
    |||||||||||||||| | | |  ||| |||||||||||||||||  ||||||||||| |||||| | |||||||||      | |||||||||| || |    
T  847931 gacacagacactgacacgccgatgccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaa 848030  T
Q  136 cgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcata 185  Q
    ||||||  ||||| |||||| ||||||| | ||||||| |||| ||||||    
T  848031 cgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcata 848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 21945483 - 21945599
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    |||||||||||||||||| | |||| | ||||||||||| |||||  ||||||||| |||||||| | ||||||||||     ||||||||| || ||||    
T  21945483 gacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt-----cggacatgacacatgtc 21945577  T
Q  142 agacaccaggacacgcctaatc 163  Q
     ||||||   ||||||||||||    
T  21945578 cgacaccgcaacacgcctaatc 21945599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 22440658 - 22440609
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtg 112  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  22440658 acaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 35723458 - 35723386
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat---cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||| | | |||||| |||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgt 35723386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 44797040 - 44796971
Alignment:
Q  45 acacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtg 112  Q
    |||| ||||| |||||||||||||||  ||||||||||||||||  ||||||||| |||||||| |||||    
T  44797040 acacggacacagacatgtcaacaccgacaataatttgagaaaataacataattcaatgtaattacatgtg 44796971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 5775416 - 5775360
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    ||||| ||||||||||||||||||||  ||||| | |||||||||||||||||||||    
T  5775416 acaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 15659820 - 15659752
Alignment:
Q  63 caacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgtcggac 129  Q
    |||||| | ||||||||||||||||||  |||||||  ||||||||||||||| ||||| |||||||||    
T  15659820 caacactgctaataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtcggac 15659752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 20633541 - 20633590
Alignment:
Q  137 gtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||| ||||||| ||||||||||||| | ||||||||||||||||||||    
T  20633541 gtgtcggacaccaagacacgcctaatccaaggagtgttcgtgcttcatag 20633590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 23292991 - 23292926
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||| || ||||||| |||||| ||||||||||||||   ||||||| ||||||||||||    
T  23292991 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

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Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 903924 - 903971
Alignment:
Q  66 caccgttaataatttgagaaaat--cataattcactgtaattatatgt 111  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 3712567 - 3712516
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtc 114  Q
    |||||| |||||||||||||||||||  ||||||| ||||||||||||||||    
T  3712567 acaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 24613752 - 24613630
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcgg------acatgatacgtgtcagacaccaggacacgcctaatc 163  Q
    |||||||||||||||||||  ||||||| ||||| || | ||||||||||  ||||||      ||| || ||||||| |||||||||||||| ||||||    
T  24613752 taataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatc 24613653  T
Q  164 aagggagtgttcgtgcttcatag 186  Q
       ||||||| ||||||||||||    
T  24613652 ctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 7970484 - 7970587
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||| ||| | ||||||||||||||||||   ||||||  |||||  ||||||||||  |||||||| ||||||||||||| | ||||| ||||    
T  7970484 tatgaagcacagatccggacacagacactgacatgctgacaccgccaataa--tgagaaaatcatataattcagtgtaattatatgttttggtgtcgtgt 7970581  T
Q  125 cggaca 130  Q
    | ||||    
T  7970582 cagaca 7970587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 33950123 - 33950193
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||  ||||| ||| |||||||||||||||||  ||||||| | |||||| ||||||||||||||    
T  33950123 acactgacacttcaacgccgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgt 33950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 56049878 - 56049972
Alignment:
Q  65 acaccgttaataatttgagaaaat-cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatc 163  Q
    |||||| |||||||||||||||   |||| |||| |||||| ||||||||||||||     | |||||||||||| || ||||||||||||| |||||||    
T  56049878 acaccgataataatttgagaaatgacatagttcaatgtaatcatatgtgtcggtgt-----cagacatgatacgtatccgacaccaggacacacctaatc 56049972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 7012046 - 7012131
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||| ||||| |||| | | |||||| |||||||||||||||||  ||||||||| ||| || ||| || |||||||||||||||    
T  7012046 gacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcgg 7012131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 16189708 - 16189765
Alignment:
Q  63 caacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtg 118  Q
    |||||||| ||| |||||||||||||  ||||||||| ||||||||| ||||||||||    
T  16189708 caacaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 29205409 - 29205503
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttg 121  Q
    |||||||||||||||| ||||  ||||| ||||   |||||| | ||||||||||| |||||||  ||||||| |||||||| | ||||||||||||    
T  29205409 tatgaagcacggatacggacatggacacggacac--caacacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttg 29205503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 34306809 - 34306743
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
    |||||||||| || ||||||| ||||||  |||||||||||||   ||| |||||||||||||||||    
T  34306809 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcataga 34306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 40179715 - 40179638
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||||||||| ||  ||||| |||||| ||||| |||||||  ||||||| |||||||||||| ||||||||    
T  40179715 gacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgt 40179638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 40613451 - 40613504
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcgg 116  Q
    |||||| ||||| |||||||||||||  ||||||| ||||||||||||||||||    
T  40613451 acaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 46160900 - 46160961
Alignment:
Q  68 ccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||| ||| |||||||||  ||||||||| ||| ||||||||||||||||| |||||||    
T  46160900 ccgttaaaaatatgagaaaataacataattcagtgttattatatgtgtcggtgtcgtgtcgg 46160961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 8423776 - 8423720
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||| |||||||||||||||||  ||||||||| ||||||||||  |||||||||    
T  8423776 acaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgt 8423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 11931362 - 11931411
Alignment:
Q  138 tgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
    |||| ||||||||||||| ||||||| | ||||||| |||||||||||||    
T  11931362 tgtccgacaccaggacacacctaatccatggagtgtccgtgcttcataga 11931411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 12047445 - 12047396
Alignment:
Q  65 acaccgttaataatttgagaaa-atcataattcactgtaattatatgtgt 113  Q
    ||||||||||||||||||||||  | |||||||| |||||||||||||||    
T  12047445 acaccgttaataatttgagaaatcttataattcagtgtaattatatgtgt 12047396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 20633471 - 20633535
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaatcataattcactgtaattatatgtgtcg 115  Q
    |||||||||| ||| |||||| ||||||||||| |||| ||||||||| |||||||| | ||||||    
T  20633471 gacactgacacgtcgacaccgctaataatttga-aaaaacataattcaatgtaattacaagtgtcg 20633535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 40742592 - 40742656
Alignment:
Q  65 acaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||| |||||||||||||||||||  |||||  | ||||||||||||||||| ||| |||||||    
T  40742592 acaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcgg 40742656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 1486760 - 1486646
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggga 169  Q
    ||||||||||| |||||||  ||||||| |||||||||| |||||||||| |||||||||| || ||||||| |||||| ||||||||||||||   |||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagga 1486661  T
Q  170 gtgttcgtgcttcat 184  Q
    ||||  |||||||||    
T  1486660 gtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 6427314 - 6427413
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    ||||||||||||| || | ||| |||||||||| | |||||||| |||||||||||||||||  ||||||||| ||||||||||||||| ||||| ||||    
T  6427314 tatgaagcacggacacgg-cacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 52903212 - 52903306
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||| ||||||||||| |||||| ||| | | | |||||||||||||| | ||||||  |||||||| |||||||||||||||||||||    
T  52903212 tatgaagcacagatacagacacggacactaacacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgt 52903306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 9709800 - 9709877
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||  ||||||||  |||||||||||||||||||||    
T  9709800 gacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgt 9709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 46348482 - 46348323
Alignment:
Q  24 ctatatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttg 121  Q
    ||||||||||||||||||| ||||| |||||||||| | | |||| | ||||||||||| ||||||  |||||| | |||||||| | ||||||     |    
T  46348482 ctatatgaagcacggatacggacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg-----g 46348388  T
Q  122 tgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||||||| || ||||||| ||||||  ||||||||| |||   || |||| ||||||||||||    
T  46348387 tgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 10233252 - 10233374
Alignment:
Q  63 caacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgtt-gtgtcggacatgatacgtgtcagacaccaggacacgcct 159  Q
    |||||||  |||||| ||||||||||||  ||||||| |||||||||||||||| ||||| |||||||   ||  | ||||| ||||||||||||| |||    
T  10233252 caacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgttggtgtcgg---tgtcatgtgtccgacaccaggacacacct 10233348  T
Q  160 aatcaagggagtgttcgtgcttcata 185  Q
    |||||  ||||||| |||||||||||    
T  10233349 aatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 1864938 - 1864880
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttg 121  Q
    |||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  1864938 acacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttg 1864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 9690351 - 9690213
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatcataattcactgtaattatatgtgtcggtgttgtgtcggaca-tgatacgtgtca 142  Q
    |||||||||||||||| |   |||||| ||||||  ||||||||||| |||||| |||||| ||||||||||     | ||||| || ||| |||||||     
T  9690351 gacacagacactgacacgctgacaccgctaataaactgagaaaatcacaattcagtgtaatcatatgtgtcg-----gcgtcggccactgacacgtgtcc 9690257  T
Q  143 gacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||| ||||||||||||||  | ||||||| |||||||||||    
T  9690256 gacaccgggacacgcctaatccggagagtgtttgtgcttcatag 9690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 36878432 - 36878518
Alignment:
Q  35 acggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| || |||| ||||||||||| | | |||||| |||||||||||||||||  ||||||||| |||||||||| ||||||||||    
T  36878432 acggacacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 70 - 173
Target Start/End: Complemental strand, 6612224 - 6612113
Alignment:
Q  70 gttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcg------gacatgatacgtgtcagacaccaggacacgcctaa 161  Q
    ||||||||||||| |||||  ||||||||| |||||||| | |||||||||| ||||||      |||| |||| ||||| |||||||||||||||||||    
T  6612224 gttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaa 6612125  T
Q  162 tcaagggagtgt 173  Q
    || | |||||||    
T  6612124 tccaaggagtgt 6612113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 13997867 - 13997942
Alignment:
Q  48 cagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttg 121  Q
    |||||||||||| | | ||||||||||| |||| | |||||||  ||||||| |||||||||||||||||||||||    
T  13997867 cagacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgttg 13997942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 29163476 - 29163323
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||  |||||| |||| |||| | | |||||| ||| |||||  ||||||||  ||||||| | |||||||||||||||||||         
T  29163476 tatgaagcacggatatggacaca-acacagacacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgt----- 29163383  T
Q  125 cggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcat 184  Q
    |||||| || ||||| | |||||| ||||||| |||||||  | ||||||||||||||||    
T  29163382 cggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 44482240 - 44482295
Alignment:
Q  74 ataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcgg 44482295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 34712434 - 34712321
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggga 169  Q
    |||||||||||||||||  ||||||| | |||||||||||||||| |||| |||||||||     |||||||  ||||  ||||||| |||||  | |||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggac-----acgtgtcctacactgggacacgtctaattcaagga 34712340  T
Q  170 gtgttcgtgcttcatagat 188  Q
    |||| ||||||||||||||    
T  34712339 gtgtccgtgcttcatagat 34712321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 20157421 - 20157341
Alignment:
Q  52 cactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    ||||||||  || |||||| ||||||| |||||||||||  ||||||| |||||| |||||||||||||| ||||| ||||    
T  20157421 cactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgaca 20157341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 37598794 - 37598950
Alignment:
Q  27 tatgaagcacggatacagacacag-acactgacatgtcaacaccgttaataatttgagaaaatcataa-ttcactgtaattatatgtgtcggtgttgtgt 124  Q
    ||||| ||||||| |||||||| | ||||||||| | | ||||   ||||||||||| ||||||| || |||| |||||||||| ||||||||||         
T  37598794 tatgacgcacggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcacaaattcagtgtaattataagtgtcggtgt----- 37598888  T
Q  125 cggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||| || ||||||| ||||   ||||||||||||||   ||||||| ||||||||||||    
T  37598889 cggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 38503321 - 38503377
Alignment:
Q  65 acaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgt 119  Q
    |||||| ||||||||||||||||||  ||| |||| |||||||||||||||||||||    
T  38503321 acaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgt 38503377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 7918262 - 7918207
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    |||||||||||||||||||  ||||||| |||||||||||||||| |||| |||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 10572661 - 10572586
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    ||||||||| | | |||||  |||||||||||||||||||  ||||||  |||||||| |||||||||||||||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgt 10572586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 25361896 - 25361951
Alignment:
Q  74 ataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||||||||||||  ||||||| |||||||||||||||| |||| |||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcgg 25361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 40285727 - 40285648
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||||||   |||||||| |||||||||||||||||  ||||||||| |||| | |||||||||| ||| |||||||    
T  40285727 gacactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgtcgg 40285648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 186
Target Start/End: Complemental strand, 19562693 - 19562556
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgt-tgtgtcggacatgatacgtgtcagacac 147  Q
    ||||||||| | | |||| | ||||||||||||||||||  ||| |||| ||||||||||||||| |||||  |||||||| |  | ||||||| |||||    
T  19562693 acactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtcagtgtcggatacaacacgtgtccgacac 19562594  T
Q  148 caggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
      |||||| |||||||   |||||| |||||||||||||    
T  19562593 agggacacacctaatccgaggagtg-tcgtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 23653318 - 23653380
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca 90  Q
    |||||||||||||||||||||| ||||| ||||||   ||||||  ||||||||||||||||||    
T  23653318 tatgaagcacggatacagacacggacac-gacatgatgacaccgcaaataatttgagaaaatca 23653380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 25452227 - 25452152
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaa--tcataattcactgtaattatatgtgtcggtgt 119  Q
    |||| |||||| |||||| |||||| | ||||||||||||||||  |||||||||| ||||||  |||||||||||||    
T  25452227 gacaaagacaccgacatgccaacactgctaataatttgagaaaatctcataattcagtgtaat--tatgtgtcggtgt 25452152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 5898345 - 5898268
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||| | | | |||||| ||||||| ||| |||||||  ||||||| |||||||||||| ||||||||    
T  5898345 gacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgt 5898268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 17754291 - 17754376
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||||| ||||||   | |||||| ||||||||||| |||||  ||||||||| ||||| |||||||||| |||| |||||||    
T  17754291 gacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 17754376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 22794157 - 22794084
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcg 115  Q
    |||| ||||||||||| |||||||| | ||||||||||| |||||  |||||| || |||||||||| ||||||    
T  22794157 gacatagacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcg 22794084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 28674800 - 28674857
Alignment:
Q  64 aacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||||||||||||  ||||||||| | ||||||||| ||| |||||    
T  28674800 aacaccgttaataatttgagaaaattacataattcagtataattatatatgttggtgt 28674857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 34371715 - 34371775
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||| |||||||| ||||||||||  ||||||| ||||||||||||||||||||| ||||    
T  34371715 acaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 36905983 - 36906060
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    ||||||||||   |||||||| ||||||| |||||||||  |||||||||  |||||||||||||| || ||||||||    
T  36905983 gacactgacacaccaacaccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtc 36906060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 40181879 - 40181967
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatc 163  Q
    |||||||||||||||||||  ||||||| ||||||||||||| |||||||     ||||||  | |||||||  ||||| ||||||||||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgtatcggtgt-----cggacacaacacgtgtcctacaccgggacacgcctaatc 40181967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 398844 - 398772
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    ||||| |||||||||| | | |||||| ||||||||||| |||||  ||||||||| |||||||||| |||||    
T  398844 gacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 2896199 - 2896123
Alignment:
Q  45 acacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||| |||||||||| | | |||||| |||||||||||||||||  ||||||||| ||||  ||||| |||||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgt 2896123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 14332388 - 14332467
Alignment:
Q  43 agacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttg 121  Q
    ||||||||||||| ||| ||| |||||| ||| |||||||||||||  ||||||||| |||||| | || |||||||||||    
T  14332388 agacacagacactaacaagtcgacaccgataa-aatttgagaaaatgacataattcaatgtaatcacatatgtcggtgttg 14332467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 15323149 - 15323249
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacac 147  Q
    |||||||||||||| | || ||||||||||||| |||||  ||||||| | ||||||| || ||||| || | |||| ||| |||| ||||||| |||||    
T  15323149 gacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtctgtatcgtgttggatatgacacgtgtccgacac 15323248  T
Q  148 c 148  Q
    |    
T  15323249 c 15323249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 31667414 - 31667482
Alignment:
Q  53 actgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||| | ||||||||| |||||||  ||||||| | |||||| | ||||||||||||    
T  31667414 actgacatgtcaacactggtaataattttagaaaatgacataattaaatgtaatcacatgtgtcggtgt 31667482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 32461458 - 32461393
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||| || ||||||| |||||  |||||||||||||| | | ||||| ||||||||||||    
T  32461458 gtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 40258985 - 40258874
Alignment:
Q  71 ttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggg 168  Q
    |||||||||||| |||||||  ||||||| |||||||| | ||||||||||     | |||| || || |||| |||||||||||||||||||||   ||    
T  40258985 ttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt-----cagacacgacacctgtccgacaccaggacacgcctaatccgagg 40258891  T
Q  169 agtgttcgtgcttcata 185  Q
    ||||| | |||||||||    
T  40258890 agtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 51410079 - 51410144
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||| || |||| || ||||||  ||||||||||||| | ||||| ||||||||||||||    
T  51410079 gtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 34073426 - 34073341
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaa--tcataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||| |||||||||||| ||||| || ||||||||||||||||  |||||||||| |||||||||||| |||||||| |||||||    
T  34073426 gacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcgg 34073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 7265666 - 7265595
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||| | |||||||| |||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 7265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 12696304 - 12696446
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    ||||| |||||||||| | | |||| | ||||||||||| |||||  ||||||||| |||||||| | ||||| |||| |||||||||| || |||||||    
T  12696304 gacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtc 12696403  T
Q  142 agacaccaggacacgcctaatcaagggagtgttcgtgcttcat 184  Q
     |||||| |||||| ||| ||| | |||||||  |||||||||    
T  12696404 tgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 17327700 - 17327590
Alignment:
Q  78 tttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttc 175  Q
    |||||||||||||  ||||| | ||||| |||||||||| |||| |||||||||| || ||||||| |||||  ||||||||||||||   ||||||| |    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtcc 17327601  T
Q  176 gtgcttcatag 186  Q
    |||||||||||    
T  17327600 gtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 28152062 - 28152217
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||  ||||| |||||||||| | | |||  | ||||||||||| |||||||  ||||||| |||||||| | ||||||||||         
T  28152062 tatgaagcacggatatggacacggacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgt----- 28152155  T
Q  125 cggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||| || ||||||| |||||| ||||| ||||||||   ||||||||||||||||||||    
T  28152156 cggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 13851716 - 13851789
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcg 115  Q
    ||||| |||||||||| ||| |||||| |||||||||||||||||  | ||||||| |||||||||||||||||    
T  13851716 gacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 7086775 - 7086863
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    ||||||||||| |||| |||  ||| | |||||||||||||||||||  ||||| | ||||||||||||||||||||| ||||| ||||    
T  7086775 gacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtcagaca 7086863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 9025545 - 9025485
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||| ||||| ||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgaca 9025485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 9027158 - 9027246
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    ||||| |||||||||| | | |||||| ||||||||||||| |||||  ||||||  ||||||||||||||||||||| ||||| ||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgaca 9027246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 9658859 - 9658998
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    ||||| |||||||||| | | |||||| ||||||||| |||||||||  ||||||| ||||||||||| ||||||||||      |||| || |||||||    
T  9658859 gacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgtt-----agacacgacacgtgtc 9658953  T
Q  142 agacaccaggacacgcctaa-tcaagggagtgttcgtgcttcata 185  Q
     |||||| | |||||||||| || | ||||||| |||||||||||    
T  9658954 tgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 3398599 - 3398733
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    ||||| |||||||||| | | |||| | ||||||||||| |||||||||  ||||| |||||||||| || ||||||| |||| ||||| || || ||||    
T  3398599 gacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattataagtatcggtgtcgtgttggacacgacacatgtc 3398697  T
Q  142 agacaccaggacacgcctaatcaagggagtgttcgt 177  Q
     |||||| | ||||| |||||||  |||||||||||    
T  3398698 cgacaccggaacacgtctaatcagaggagtgttcgt 3398733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 5732583 - 5732512
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||| | | ||||||||||||||||||||||||  |||| || | |||||||||||||||||||||    
T  5732583 gacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgt 5732512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 7996451 - 7996380
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||| | |||| | ||||||||||||||||||  |||||||| |||||||||||| ||||||||    
T  7996451 gacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 7996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 8022350 - 8022421
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||| | |||| | ||||||||||||||||||  |||||||| |||||||||||| ||||||||    
T  8022350 gacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 8022421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 30866204 - 30866149
Alignment:
Q  63 caacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcgg 116  Q
    |||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||    
T  30866204 caacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 9617437 - 9617491
Alignment:
Q  67 accgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||| |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9617491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 30851610 - 30851657
Alignment:
Q  72 taataatttgagaaaatcataattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  30851610 taataatttaagaaaatcacaattcaatgtaattatatgtgtcggtgt 30851657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 34595142 - 34595255
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggga 169  Q
    ||||||||||| |||||||  ||||||| |||||||| | ||||||||||     |||||| || ||||||| |||||| |||||| |||||||   |||    
T  34595142 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt-----cggacacgacacgtgtctgacaccgggacacacctaatccgagga 34595236  T
Q  170 gtgttcgtgcttcatagat 188  Q
    |||| ||||||||||||||    
T  34595237 gtgtccgtgcttcatagat 34595255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 24138434 - 24138511
Alignment:
Q  72 taataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacac 147  Q
    ||||||||||| |||||||||  ||| | |||| |||||||| |||||||||||| |||||||| ||||||| |||||    
T  24138434 taataatttgaaaaaatcatataattaagtgtatttatatgtatcggtgttgtgttggacatgacacgtgtctgacac 24138511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 7377980 - 7378036
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||| ||| |||||||||||||||  ||||||| |||||||||||||||||||||    
T  7377980 acaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 7378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 9629392 - 9629440
Alignment:
Q  73 aataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 156
Target Start/End: Complemental strand, 13364754 - 13364675
Alignment:
Q  74 ataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacg 156  Q
    |||||||||||||||||||  ||||| |||||| |||||||||||||||     ||||| ||||| |||| ||||||||||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgtt-----ggacacgatacatgtctgacaccaggacacg 13364675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 19040353 - 19040409
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||| |||||||||||||||||||  ||||||| |||||||||||||||| ||||    
T  19040353 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgt 19040409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 677798 - 677865
Alignment:
Q  27 tatgaagcacggatacagacac--agacactgacatgtcaacaccgttaataatttgagaaaatcata 92  Q
    |||||||||  |||||||||||  ||||||||||| | | |||| |||||||||||||||||||||||    
T  677798 tatgaagcattgatacagacacacagacactgacacgccgacactgttaataatttgagaaaatcata 677865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 21395380 - 21395304
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat-cataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    ||||| |||| | |||||||| ||||||||||||||||| ||||||| | |||||||| | |||||||||| |||||    
T  21395380 gacaccgacacgccaacaccgctaataatttgagaaaatacataatttagtgtaattacaagtgtcggtgtcgtgtc 21395304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 31579285 - 31579229
Alignment:
Q  63 caacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||  |||||||||||||    
T  31579285 caacaccgttaataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 32320727 - 32320664
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcg 126  Q
    |||||||||||||||||| |||||  ||||||||| ||| ||||||||| ||||||| ||||||    
T  32320727 acaccgttaataatttgataaaatcacataattcaatgtcattatatgtatcggtgtcgtgtcg 32320664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 5462687 - 5462733
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatat 109  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||    
T  5462687 acaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 7625185 - 7625244
Alignment:
Q  136 cgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatagatcacaact 195  Q
    |||||| |||||| | |||||| ||||| | |||||||||||||||||||||| ||||||    
T  7625185 cgtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatagataacaact 7625244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 9195805 - 9195751
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||||  ||||||| | ||||||||||||||||||||| ||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 10294087 - 10294169
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    ||||| || ||||||||| | | |||| ||||||||||||| ||||  ||| |||| ||||||||||||||||||||| ||||    
T  10294087 gacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgt 10294169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 25038150 - 25038068
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||| ||||||| ||  ||||||||||||||||||||||||  ||||||| | |||||||| |  ||||||| ||||||    
T  25038150 gacacagatactgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgt 25038068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 34447436 - 34447389
Alignment:
Q  45 acacagacactgacatgtcaacaccgttaataatttgagaaaatcata 92  Q
    ||||||||| ||||| | |||||||||||||||||||| |||||||||    
T  34447436 acacagacaatgacacgccaacaccgttaataatttgataaaatcata 34447389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 186
Target Start/End: Complemental strand, 10770747 - 10770607
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatac--gtgtcagac 145  Q
    |||||||||| | ||||||   ||||||||||| |||||||  ||||||| |||||||| | |||||||||| ||||| |||| || ||  ||||| ||     
T  10770747 gacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacacgacacacgtgtccgat 10770648  T
Q  146 accaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
     || ||||| ||||||||   ||||||| ||||||||||||    
T  10770647 gccgggacatgcctaatctgaggagtgtccgtgcttcatag 10770607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 15443682 - 15443759
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcg 126  Q
    ||||||||| ||| ||| |  |||||||||||||||||  ||||||||| | ||||||||| ||| ||||||||||||    
T  15443682 acactgacacgtcgacatcaataataatttgagaaaataacataattcaatataattatatatgttggtgttgtgtcg 15443759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 20371189 - 20371112
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||| ||||| | | |||||| |||||||||||||||||  ||||| ||| ||| |||||||||||||||||    
T  20371189 gacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgt 20371112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 21924986 - 21924937
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  21924986 taataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgt 21924937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 26562701 - 26562754
Alignment:
Q  76 aatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||||||||||  ||||||| ||||||||||||||||| ||| |||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcgg 26562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 28862084 - 28862184
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca---taattcactgtaattatatgtgtcggtgttgtg 123  Q
    ||||||||||||| || ||||||||||| | || | | ||| || ||||||||||| ||||| |   ||||||| |||||| |||||||||||||| |||    
T  28862084 tatgaagcacggacacggacacagacaccggcacgccgacatcgataataatttgataaaatgacattaattcagtgtaatcatatgtgtcggtgtcgtg 28862183  T
Q  124 t 124  Q
    |    
T  28862184 t 28862184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 14721242 - 14721298
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||||||||| |||||||  ||||||||||| ||||||||||||| |||||    
T  14721242 acaccattaataatttaagaaaattacataattcactataattatatgtgttggtgt 14721298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 17341735 - 17341671
Alignment:
Q  52 cactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    |||||||| | | |||||||||||||||||| |||||  ||||||||| |||||||||| |||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 31384979 - 31385048
Alignment:
Q  116 gtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcata 185  Q
    |||| |||| ||||| || |||||||  ||||| |||||||||||||| | ||||||| |||||||||||    
T  31384979 gtgtagtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 33001340 - 33001229
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggga 169  Q
    ||||||||||| |||||||  ||||| | |||||||||||||||||     |||||||||| || ||||||| ||||||   | |||||||||| |  ||    
T  33001340 taataatttgaaaaaatcacataattaaatgtaattatatgtgtcg-----gtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaaga 33001246  T
Q  170 gtgttcgtgcttcatag 186  Q
    ||||| |||||||||||    
T  33001245 gtgtttgtgcttcatag 33001229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 28851 - 28919
Alignment:
Q  65 acaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgtcggacat 131  Q
    |||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||||||||| |||||    
T  28851 acaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtcagacat 28919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 187
Target Start/End: Original strand, 37558940 - 37559097
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||| ||||| |||||||||| | | |||| | ||||||||||  |||||  ||||||||| |||||||| | ||||||     ||||    
T  37558940 tatgaagcacggatacggacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcg-----gtgt 37559034  T
Q  125 cggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
    ||||| ||| ||||||| |||||| | |||||| |||||   ||||||| |||||||||||||    
T  37559035 cggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcataga 37559097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 39279665 - 39279734
Alignment:
Q  54 ctgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttg 121  Q
    |||||| | |||||||||||||||| |||||||||||  ||||||| |||||||||||||||||||||||    
T  39279665 ctgacacgccaacaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgttg 39279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 37411325 - 37411250
Alignment:
Q  42 cagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcg 115  Q
    ||||||||||| |||||||| | |||||| |||||||||||||||||  ||||||||| ||| |||||||||||||    
T  37411325 cagacacagacgctgacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 18276504 - 18276578
Alignment:
Q  47 acagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||||| ||| | |||||| |||||||||||||||||||  ||||||| ||||||||| |||||||||||    
T  18276504 acagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgt 18276578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 18570952 - 18571068
Alignment:
Q  43 agacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgt 140  Q
    |||||| ||||| ||| ||||||||||| |||||||||||||||||  ||||||||| |||||| |||||||||      |||||| ||| ||||| | |    
T  18570952 agacacggacacagac-tgtcaacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtc-----agtgtcgaacacgatacatat 18571045  T
Q  141 cagacaccaggacacgcctaatc 163  Q
    | |||||||||||||||||||||    
T  18571046 ccgacaccaggacacgcctaatc 18571068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 44860321 - 44860382
Alignment:
Q  65 acaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||    
T  44860321 acaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 30527674 - 30527554
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    ||||| ||||||||||   | |||| |||||||||||||||||||||||  ||| | ||||||||||||||||||| | |||||| |||||| || |||     
T  30527674 gacactgacactgacacacccacactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggtatcgtgtcgcacatgagacatgtt 30527575  T
Q  142 agacaccaggacacgcctaat 162  Q
     |||| |  ||||||||||||    
T  30527574 cgacatcgtgacacgcctaat 30527554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 35449493 - 35449565
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    |||||| ||||||||| | |||||| |||||||||||||||||||  || |||||| ||||||||||||||||    
T  35449493 gacacaaacactgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 44605235 - 44605140
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgtt 120  Q
    |||||||||| || ||| |||| || | ||||| |||||| ||  |||||||||||||||||  ||||||||| |||||||| |||||||||||||    
T  44605235 tatgaagcacagacacaaacaccgataatgacacgtcaacgccaataataatttgagaaaataacataattcaatgtaattacatgtgtcggtgtt 44605140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 18420504 - 18420430
Alignment:
Q  53 actgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    ||||||| | |||||| | |||||||||||||||||||  ||||||| || ||||||| ||||||||||||||||    
T  18420504 actgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtc 18420430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 10535734 - 10535684
Alignment:
Q  137 gtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
    ||||| |||||||||||||||||||||   |||||||||||||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcataga 10535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 14268804 - 14268731
Alignment:
Q  52 cactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtg 123  Q
    |||||||| |||||||||| |||||||||||||||||  | ||||| |  ||||| ||||||||||||||||||    
T  14268804 cactgacacgtcaacaccggtaataatttgagaaaatgacttaattgaacgtaatgatatgtgtcggtgttgtg 14268731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 28412330 - 28412395
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattat 107  Q
    ||||| |||||| ||| |||||||||||||||||||||| |||||  ||||||||| |||||||||    
T  28412330 gacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 23718006 - 23718082
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtg 118  Q
    ||||| ||||||||||   | |||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||    
T  23718006 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 24105678 - 24105754
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtg 118  Q
    ||||| ||||||||||   | |||||| ||||||||||||||| |||  ||||||| ||||||||||||||||||||    
T  24105678 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 37419808 - 37419873
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||| ||| |||||| |||||| ||||||||||||||   ||||||| ||||||||||||    
T  37419808 gtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 41843480 - 41843565
Alignment:
Q  101 taattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||||||||||||||||||||||  || ||||||| |||||  |||||||| | |||   |||||||  |||||||||||    
T  41843480 taattatatgtgtcggtgttgtgtcggacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 12224277 - 12224337
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgctt 181  Q
    |||||||||| |||||||||| |||||  |||||||||||||| | |||||||| ||||||    
T  12224277 gtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgtttgtgctt 12224337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 21616742 - 21616813
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgt 113  Q
    ||||| ||||| |||| | | |||||| |||||||||||||||||  ||||||||| |||||||||||||||    
T  21616742 gacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 23921236 - 23921299
Alignment:
Q  47 acagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattata 108  Q
    ||||||| ||||| ||| | ||||||||||||||||||||||  ||||||||| ||||||||||    
T  23921236 acagacattgacaggtcgataccgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 24975383 - 24975321
Alignment:
Q  65 acaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    |||||| ||||||||||||||||||  |||||||| ||||| |||||| |||||||| |||||    
T  24975383 acaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtc 24975321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 34691861 - 34691807
Alignment:
Q  67 accgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgt 119  Q
    |||| ||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  34691861 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34691807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 34714273 - 34714219
Alignment:
Q  67 accgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgt 119  Q
    |||| ||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  34714273 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgt 34714219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 36756423 - 36756341
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||| ||| ||||   |||||||||||  ||||  ||||||||| |||||||||| |||||||||| ||||    
T  36756423 gacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 5367200 - 5367249
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||| ||||||  ||||||| |||||||||||||||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgt 5367249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 22084893 - 22084863
Alignment:
Q  62 tcaacaccgttaataatttgagaaaatcata 92  Q
    |||||||||||||||||||||||||||||||    
T  22084893 tcaacaccgttaataatttgagaaaatcata 22084863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 24009349 - 24009415
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
    |||||||||| || ||||||| |||||  |||||||||| ||| | ||||||| |||||||||||||    
T  24009349 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataga 24009415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 26769579 - 26769649
Alignment:
Q  124 tcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatagatcacaac 194  Q
    ||||||| || ||||||| |||||  ||||||||||||||   ||||||| |||||||||||||| |||||    
T  26769579 tcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatagatgacaac 26769649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 28121607 - 28121550
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgtt 120  Q
    ||||| ||||||||||||||||||  ||||| ||| ||||||||||||||| ||||||    
T  28121607 acaccattaataatttgagaaaatggcataaatcaatgtaattatatgtgttggtgtt 28121550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 39323231 - 39323308
Alignment:
Q  31 aagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaatta 106  Q
    ||||||| |||| ||||| |||||||| | ||| |||||| ||||||||||| |||||  ||||||||| ||||||||    
T  39323231 aagcacgaatacggacacggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 22550283 - 22550246
Alignment:
Q  90 ataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  22550283 ataattcagtgtaattatatgtgtcagtgttgtgtcgg 22550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 35056896 - 35056933
Alignment:
Q  90 ataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcgg 35056933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 42832334 - 42832278
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||| |||||||||||||||||  |||| |||| |||||||||| ||||||||||    
T  42832334 acaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgt 42832278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 263451 - 263366
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaa--tcataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||   ||||||||| |||||||||| ||||| |||| |||||||    
T  263451 gacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcgg 263366  T

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Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 20503429 - 20503591
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||| ||||| |||||||||| | | ||||    |||||||||| |||||  ||||||||| |||||||| | ||||||||||||       
T  20503429 tatgaagcacggatacggacac-gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttg--- 20503524  T
Q  125 cggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatagatcacaa 193  Q
      |||| || || |||| |||||| ||||||||||||||   ||||||| |||||||||||||| ||||    
T  20503525 --gacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagattacaa 20503591  T

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Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 6525773 - 6525713
Alignment:
Q  30 gaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca 90  Q
    ||||||||||||| |||||  ||||||||||||| |||||| |||||||||||||||||||    
T  6525773 gaagcacggatacggacacgtacactgacatgtcgacaccgctaataatttgagaaaatca 6525713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 29508452 - 29508567
Alignment:
Q  72 taataatttgagaaaatcata--attcactgtaattatatgtgtcggtgtt-gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggg 168  Q
    ||||||||||| |||||||||  ||||| ||||||||||||||||| |||| |||||||||| || ||  ||| |||||| ||||||| |||||| | |     
T  29508452 taataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaaga 29508551  T
Q  169 agtgttcgtgcttcat 184  Q
    ||||| ||||||||||    
T  29508552 agtgtccgtgcttcat 29508567  T

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Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 40993431 - 40993275
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat---cataattcactgtaattatatgtgtcggtgttgtg 123  Q
    |||||||||||||||| ||||| ||||| ||||  || |||||| ||||||||| | ||||    ||||||||| |||||||||||||||||     |||    
T  40993431 tatgaagcacggatacggacac-gacacggacacctcgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcg-----gtg 40993338  T
Q  124 tcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||||| || || |||| |||||| ||||||||||||||   ||||||| | ||||||||||    
T  40993337 tcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

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Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 8039895 - 8039829
Alignment:
Q  63 caacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||||| ||||||||||||||||| |||  ||||| ||||||||||||||||||||| |||||||    
T  8039895 caacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcgg 8039829  T

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Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 11658795 - 11658868
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcg 115  Q
    ||||||||||||||||   ||||| ||||||||||||||||||||  ||||||||| ||| |||||||||||||    
T  11658795 gacacagacactgacacaccaacatcgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcg 11658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 16192808 - 16192744
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||| | ||| |||||||    
T  16192808 acaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcgg 16192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 17005679 - 17005548
Alignment:
Q  63 caacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgtt------gtgtcggacatgatacgtgtcagacaccaggaca 154  Q
    |||||||  ||||||||||| |||||||||  ||||| |||||||||| |||||||||||      ||||| ||||| | ||||||| ||||||||||||    
T  17005679 caacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggaca 17005580  T
Q  155 cgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |  ||||||   |||||||| |||||||||||    
T  17005579 cctctaatccgaggagtgtttgtgcttcatag 17005548  T

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Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 27505273 - 27505370
Alignment:
Q  89 cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||||| | |||||||| | |||||||||| ||||| |||| || ||||||| |||||| ||||| ||||||||   ||||||| ||||||||||||    
T  27505273 cataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

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Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 25948969 - 25948878
Alignment:
Q  41 acagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    |||||||| |||||||||||| | | || | ||||||||||| |||||  ||||||||| |||||||||| |||| ||||| ||||||||||    
T  25948969 acagacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggaca 25948878  T

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Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 7948950 - 7949059
Alignment:
Q  56 gacatgtcaacaccgttaataatttgagaaaat---cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccagga 152  Q
    ||||| ||||||||| ||||| ||||||||||    ||||||||| ||||||| |||||||| | || ||||||||||||||  || ||  |||||||||    
T  7948950 gacatatcaacaccgataatagtttgagaaaaatgacataattcaatgtaattgtatgtgtcagagtcgtgtcggacatgatttgtatccaacaccagga 7949049  T
Q  153 cacgcctaat 162  Q
    ||| ||||||    
T  7949050 cacacctaat 7949059  T

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Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 22774166 - 22774072
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||| ||||||||||| |||| ||| |||||  |||||||| || ||| |  |||| |||| |||||||||| ||||||||||    
T  22774166 tatgaagcacggatacggacacagacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgt 22774072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 8383237 - 8383314
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||| ||||| | | |||||| ||||||||||||||||||  |||||||| |||||||||| ||||||||||    
T  8383237 gacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgt 8383314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 32804608 - 32804547
Alignment:
Q  55 tgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    ||||||| | ||||||||||||||||||||||||  ||||||| | ||||||||||||||||    
T  32804608 tgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 37077321 - 37077410
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    ||||||||||||||| |||||| |||| ||||| | | |||||| |||||||||||||| ||  ||||||||| || ||| |||||||||    
T  37077321 tatgaagcacggataaagacacggacagtgacacgccgacaccgataataatttgagaatataacataattcaatggaatcatatgtgtc 37077410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 7928451 - 7928507
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||| ||||||||||| |||||||  ||||||| |||||||||||||||||||||    
T  7928451 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgt 7928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 18268075 - 18267995
Alignment:
Q  53 actgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacat 131  Q
    |||||||||||||||| | ||||||||||||||||| |  ||||| |  ||||| | ||||||||||||||||| ||||||    
T  18268075 actgacatgtcaacactgataataatttgagaaaatgaattaattgaacgtaatcacatgtgtcggtgttgtgttggacat 18267995  T

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Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 28918009 - 28918120
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggga 169  Q
    ||||||||||| |||||||  ||||||| |||||||| | |||||||||| |||   |||| || ||||||| |||||  |||||||||||||| | |||    
T  28918009 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg---gacacgacacgtgtccgacactgggacacgcctaatccaagga 28918105  T
Q  170 gtgttcgtgcttcat 184  Q
    |||| | ||||||||    
T  28918106 gtgtccctgcttcat 28918120  T

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Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 35222965 - 35223057
Alignment:
Q  89 cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||||||| |||||||||||||||||     ||||||||||||| ||||||| |||||  |||||||| | |||   ||||||| ||||||||||||    
T  35222965 cataattcaatgtaattatatgtgtcg-----gtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 25775576 - 25775624
Alignment:
Q  136 cgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcat 184  Q
    |||||| |||||||||||||||||||||   ||||||||||||||||||    
T  25775576 cgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 49651837 - 49651778
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggac 129  Q
    ||||||||||| |||||||  |||||||||||||||| | |||||||||| |||||||||    
T  49651837 taataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 5441110 - 5440967
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    |||||||||||||||| | |  ||||| ||| |||||||||||||  ||||||||| || |||  ||||||||||||||||||| |||| || || ||||    
T  5441110 gacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattcaatggaat--tatgtgtcggtgttgtgtcagacacgacacatgtc 5441013  T
Q  142 agacaccaggacac-gcctaatcaagggagtgttcgtgcttcatag 186  Q
      |||||  ||||| |||||||    ||||||| ||||||||||||    
T  5441012 caacaccgagacacggcctaattcgaggagtgtccgtgcttcatag 5440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 24633459 - 24633401
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttg 121  Q
    |||| ||||||||||||  |||||||  ||||||| |||||||||||||||||||||||    
T  24633459 acacagttaataatttggaaaaatcacgtaattcaatgtaattatatgtgtcggtgttg 24633401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 40052380 - 40052431
Alignment:
Q  135 acgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||||| |||||| ||||||||||||||   ||||||||||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 20691327 - 20691376
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||||  ||||||||| |||||| ||||||||||||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgt 20691376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 25093482 - 25093559
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||||| ||| | | |||| |||||| |||||||||||||| |  ||||| |||||||||||||||||||||    
T  25093482 gacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 25093559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 55401129 - 55401194
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||| || ||||||| ||||||  |||||||||||||   ||||||| ||||||||||||    
T  55401129 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 44067497 - 44067644
Alignment:
Q  45 acacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattata-----tgtgtcggtgttgtgtcggaca-tgatac 136  Q
    |||| |||||||||| | | |||| | |||||||||||||||||  |||||| || ||||||||||      |||||||||| |||||||||| |||| |    
T  44067497 acaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcgtgtcggacactgatgc 44067596  T
Q  137 gtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcat 184  Q
    ||||| ||||||||||||||||||||    ||||||| ||||||||||    
T  44067597 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 14134662 - 14134756
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||| ||||| ||||| |||| ||| |||    |||||||||||||||||||  ||||||| ||||||||||| |||||||||    
T  14134662 tatgaagcacggatacggacaccgacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 20679471 - 20679397
Alignment:
Q  47 acagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||||||||||| |||||  |||||||||||||||||  |||| |||| |||||||||| ||||||||||    
T  20679471 acagacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgt 20679397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 36450850 - 36450694
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||| ||||| |||||||||| | | ||||   ||||||||||| ||||||| |  ||||| |||||||| | |||| |||||         
T  36450850 tatgaagcacggatacggacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgt----- 36450756  T
Q  125 cggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||| ||  |||||| |||||||||||||||||||||   |||||||  |||||||||||    
T  36450755 cggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 4611535 - 4611599
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||| |||||||||||||||||  ||||||||| ||||||||||||| |||||| ||||||||    
T  4611535 acaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtcgg 4611599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 13844689 - 13844598
Alignment:
Q  29 tgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||| |||||||||| ||||| |||| | | |||| | |||||||||||||||||||  ||||| | |||||||||||||||||||||    
T  13844689 tgaagcacgaatacagacac-gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgt 13844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 4786411 - 4786340
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||| | | ||||| |||||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 34897071 - 34897138
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcg 115  Q
    ||||| |||| ||| |||||| |||||||||||||||||  ||||||||| |||||||||||||||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 29447161 - 29447040
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgtt------gtgtcggacatgatacgtgtcagacaccaggacacgcctaatc 163  Q
    |||||||||||||||||||  ||||||| ||||| || | ||||||||||       |||||||||| || | ||||| |||||||||||||||||||||    
T  29447161 taataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatc 29447062  T
Q  164 aagggagtgttcgtgcttcata 185  Q
       ||||||| |||||||||||    
T  29447061 ctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 31109614 - 31109551
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatca 90  Q
    |||||||||| ||||  ||||| |||||||||| | | ||||||||||||||||||||||||||    
T  31109614 tatgaagcactgatatggacacggacactgacacgccgacaccgttaataatttgagaaaatca 31109551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 11803260 - 11803321
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||| ||||||||||| |||||||||  ||||||| ||||||||||||||| ||||||||||    
T  11803260 acactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgt 11803321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 11927144 - 11927083
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||| ||||||||||||| |||||||  ||||||| ||||||||||||||||||||| ||||    
T  11927144 acactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 12606880 - 12606831
Alignment:
Q  72 taataatttgagaaaatcata--attcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  12606880 taataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgt 12606831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 24362281 - 24362196
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||||||| |||| | | |||||| ||||||||||||| |||||  ||||||| ||||||||||||||||  ||| |||||||    
T  24362281 gacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcgg 24362196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 24669413 - 24669490
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||| |   ||||||||||||||||||| ||||  ||||||||| |||||||| | ||||||||||    
T  24669413 gacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgt 24669490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 28385073 - 28384996
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcggtgt 119  Q
    ||||| |||||||||||  | |||||||||||||| |||  |||||  |||||||| |||||||||||||||||||||    
T  28385073 gacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgtcggtgt 28384996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 31236628 - 31236580
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtg 118  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 7658471 - 7658522
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttg 121  Q
    |||||||||||||||||  ||||||||| ||||||||||| |||||||||||    
T  7658471 taataatttgagaaaattacataattcagtgtaattatatttgtcggtgttg 7658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 4122280 - 4122245
Alignment:
Q  90 ataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    |||||||| |||||||||||||||||||||||||||    
T  4122280 ataattcattgtaattatatgtgtcggtgttgtgtc 4122245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 27213555 - 27213601
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcgg 116  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||    
T  27213555 taataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 33405437 - 33405324
Alignment:
Q  70 gttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagg 167  Q
    |||||||||||||||||| ||  ||||| | |||||||||||||||||     |||||||||| || || |||| |||||| ||||||| |||||| |      
T  33405437 gttaataatttgagaaaaacacataatttagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtctgacacctggacacggctaatccaat 33405343  T
Q  168 gagtgttcgtgcttcatag 186  Q
    |||||| |||||| |||||    
T  33405342 gagtgtccgtgctccatag 33405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 162
Target Start/End: Complemental strand, 41832012 - 41831899
Alignment:
Q  51 acactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgtt-gtgtcggacatgatacgtgtcagacac 147  Q
    |||| |||||| | |||| ||||||||||||| |||||  ||||||||| ||||| || | ||||| ||||| |||||||||| ||||||| || ||||     
T  41832012 acacagacatgccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtc-gtgttggtgtcggacacgatacgtatccgacaa 41831914  T
Q  148 caggacacgcctaat 162  Q
    ||||||||| |||||    
T  41831913 caggacacgtctaat 41831899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 11944666 - 11944727
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||| ||||||||||||| |||||||  ||| ||| ||||||||||||||||||||| ||||    
T  11944666 acactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 16641991 - 16641909
Alignment:
Q  104 ttatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||||||||| |||||||||| || | |||||  ||||| |||||| |||||||   |||||||  |||||||||||    
T  16641991 ttatatgtgtcggtgtcgtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 33382078 - 33382021
Alignment:
Q  64 aacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||||| ||||||||| |||||||  |||||||||  ||||||||||||||||||||    
T  33382078 aacaccgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtgt 33382021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 8798890 - 8798838
Alignment:
Q  64 aacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc 114  Q
    ||||| |||||||||||||||||||  ||||||||| | ||||||||||||||    
T  8798890 aacactgttaataatttgagaaaataacataattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 12124091 - 12124136
Alignment:
Q  47 acagacactgacatgtcaacaccgttaataatttgagaaaatcata 92  Q
    |||||||| |||| | |||||||| |||||||||||||||||||||    
T  12124091 acagacacggacaagccaacaccgctaataatttgagaaaatcata 12124136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 13018262 - 13018307
Alignment:
Q  45 acacagacactgacatgtcaacaccgttaataatttgagaaaatca 90  Q
    ||||||||||| ||| ||||| |||||||||||||||| |||||||    
T  13018262 acacagacactaacacgtcaataccgttaataatttgacaaaatca 13018307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 24858039 - 24858135
Alignment:
Q  89 cataattcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    ||||||||| |||||| | | |||||| ||| |||||||||| || | |||||  || || |||||||||||||||  |||||||| |||||||||||    
T  24858039 cataattcagtgtaat-acaagtgtcgttgtcgtgtcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgcttcatag 24858135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 34451026 - 34450961
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||||||| || ||||||| |||||  |||||||||| ||| | ||||||| ||||||||||||    
T  34451026 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 90823 - 90896
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatc--ataattcactgtaattatatgtgtcg 115  Q
    ||||||||||||||||   ||||||| |||||||||||||||||||  |||||||| ||||||||||| |||||    
T  90823 gacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 99879 - 99956
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtc 125  Q
    ||||| |||||||| |||||| ||||||||| |||||||  ||||||||| ||||||||||||||| ||||| |||||    
T  99879 gacacggacatgtcgacaccgataataattttagaaaataacataattcaatgtaattatatgtgttggtgtcgtgtc 99956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 13408 - 13523
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt-tgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggg 168  Q
    |||||||||||||||||  ||||||||| || ||||| | | ||||||||  |||||||||| || ||| ||| ||||| ||||||| ||||||| | ||    
T  13408 taataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaagg 13507  T
Q  169 agtgttcgtgcttcat 184  Q
    ||||| ||||||||||    
T  13508 agtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 21919 - 21804
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt-tgtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaaggg 168  Q
    |||||||||||||||||  ||||||||| || ||||| | | ||||||||  |||||||||| || ||| ||| ||||| ||||||| ||||||| | ||    
T  21919 taataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaagg 21820  T
Q  169 agtgttcgtgcttcat 184  Q
    ||||| ||||||||||    
T  21819 agtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 32659 - 32751
Alignment:
Q  27 tatgaagcacggatacagacacagacactgacatgtcaacaccgttaataatttgagaaaatcataattcactgtaattatatgtgtcggtgt 119  Q
    |||||||||||||||| ||||||||||| |||| | ||||||| ||||| ||| ||||| ||||| |||   ||||| |||||||||| ||||    
T  32659 tatgaagcacggatacggacacagacacggacaaggcaacaccattaattattggagaagatcatgattttgtgtaactatatgtgtcagtgt 32751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 9798 - 9744
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||| ||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgt 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 14581 - 14647
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcataga 187  Q
    |||||||||| || ||||||| ||||||  ||||||||||||| | ||||||| |||||||||||||    
T  14581 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcataga 14647  T

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Target: scaffold0320 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 17094 - 17037
Alignment:
Q  65 acaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgtt 120  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||||||| ||||||    
T  17094 acaccgttaataatttgagaaaatggcataaatcaatgtaattatatgtgttggtgtt 17037  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 195
Target Start/End: Original strand, 8778 - 8926
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaatcata--attcactgtaattatatgtgtcggtgttgtgtcggacatgatacgtgtc 141  Q
    ||||| |||||||||| | | |||| | ||||||||||| |||||||||  ||| | |||||||| | ||||||     |||||||||| || |||||||    
T  8778 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcg-----gtgtcggacacgacacgtgtc 8872  T
Q  142 agacaccaggacacgcctaatcaagggagtgttcgtgcttcatagatcacaact 195  Q
     ||||||  |||||||||||||   ||||| | |||||||||||||||| ||||    
T  8873 cgacaccgagacacgcctaatctgaggagtctccgtgcttcatagatcagaact 8926  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 44583 - 44519
Alignment:
Q  65 acaccgttaataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    |||||| ||| |||||||||||||||  ||||||| ||||||||||||||||||| | |||||||    
T  44583 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcgg 44519  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 135363 - 135303
Alignment:
Q  72 taataatttgagaaaatca--taattcactgtaattatatgtgtcggtgttgtgtcggaca 130  Q
    |||||||||||||||||||  ||||||  ||||||||||||||||||||| ||||| ||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgaca 135303  T

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Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 135313 - 135263
Alignment:
Q  136 cgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatag 186  Q
    |||||| |||||||||||||||||||||   || |||||||||||||||||    
T  135313 cgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 225347 - 225199
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtc-----ggtgttgtgtcggaca-tgata 135  Q
    ||||| |||||||||| | | |||| | |||||||||||||||||  |||||| || |||||||||| |||||     ||||| |||||||||| |||      
T  225347 gacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgtcgtgtcggacactgacg 225248  T
Q  136 cgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcat 184  Q
    |||||  ||||||||||||||||||||    ||||||| ||||||||||    
T  225247 cgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 241659 - 241731
Alignment:
Q  121 gtgtcggacatgatacgtgtcagacaccaggacacgcctaatcaagggagtgttcgtgcttcatagatcacaa 193  Q
    |||||||||| || ||||||| |||||| ||||||||||||||   | ||||| |||||||||||||| ||||    
T  241659 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagattacaa 241731  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 26372 - 26446
Alignment:
Q  43 agacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcg 115  Q
    ||||||||||| ||||| ||| |||||  |||||||||||||||||  ||||||||| |||  ||||||||||||    
T  26372 agacacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtgtcg 26446  T

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Target: scaffold1528 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 1015 - 1100
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||||| ||||||   | |||||| ||||||||||| |||||  ||||||||| ||||| |||||||||| |||| |||||||    
T  1015 gacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 1100  T

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Target: scaffold0376 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 6320 - 6369
Alignment:
Q  72 taataatttgagaaaat--cataattcactgtaattatatgtgtcggtgt 119  Q
    ||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  6320 taataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgt 6369  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 21023 - 21108
Alignment:
Q  44 gacacagacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||| ||||||||||||   |||| |||||||||||||||||||  ||||| ||  | ||||||||||||||||| | |||||||    
T  21023 gacacggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgtcgg 21108  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 145906 - 145944
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat 88  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  145906 gacactgacatgtcaacaccggtaatagtttgagaaaat 145944  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 53189 - 53245
Alignment:
Q  73 aataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgtcgg 127  Q
    ||||||||||||||||  ||||||||| |||||||||| |||||||||  |||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcgg 53245  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 92793 - 92869
Alignment:
Q  50 gacactgacatgtcaacaccgttaataatttgagaaaat--cataattcactgtaattatatgtgtcggtgttgtgt 124  Q
    |||||||||| | | |||||| |||||||||||||||||  ||||||||| |||||||| | ||||| || ||||||    
T  92793 gacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtcagttttgtgt 92869  T

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