View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6395_low_9 (Length: 368)

Name: NF6395_low_9
Description: NF6395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6395_low_9
NF6395_low_9
[»] chr7 (58 HSPs)
chr7 (159-333)||(26134749-26134923)
chr7 (172-271)||(23093295-23093394)
chr7 (34-108)||(26134628-26134702)
chr7 (163-262)||(4258891-4258990)
chr7 (160-262)||(15303623-15303725)
chr7 (185-255)||(2563819-2563889)
chr7 (183-271)||(10937587-10937676)
chr7 (201-260)||(6042457-6042516)
chr7 (185-271)||(7318259-7318345)
chr7 (213-271)||(5047442-5047500)
chr7 (185-260)||(4986551-4986627)
chr7 (185-260)||(4990649-4990725)
chr7 (190-254)||(7397198-7397262)
chr7 (185-244)||(9261216-9261276)
chr7 (160-255)||(11221166-11221262)
chr7 (160-271)||(18449227-18449339)
chr7 (160-271)||(2453718-2453829)
chr7 (160-270)||(9864328-9864438)
chr7 (185-255)||(18369007-18369078)
chr7 (185-255)||(5108567-5108637)
chr7 (182-271)||(9916551-9916641)
chr7 (182-271)||(9924463-9924553)
chr7 (160-244)||(9245193-9245278)
chr7 (184-260)||(10584512-10584589)
chr7 (160-248)||(21227187-21227276)
chr7 (185-260)||(10587051-10587127)
chr7 (185-260)||(23099979-23100055)
chr7 (190-260)||(2350779-2350850)
chr7 (185-255)||(8054085-8054156)
chr7 (160-255)||(9866543-9866638)
chr7 (190-260)||(16365701-16365772)
chr7 (160-246)||(21230322-21230409)
chr7 (190-248)||(6005845-6005903)
chr7 (190-255)||(31492931-31492997)
chr7 (191-271)||(8979039-8979119)
chr7 (203-271)||(9890168-9890237)
chr7 (184-239)||(3329684-3329740)
chr7 (160-271)||(5797497-5797608)
chr7 (160-271)||(16306680-16306791)
chr7 (160-271)||(17153156-17153267)
chr7 (160-264)||(20174564-20174668)
chr7 (160-271)||(33035458-33035569)
chr7 (160-254)||(13759862-13759957)
chr7 (202-260)||(15869591-15869650)
chr7 (201-255)||(18661591-18661646)
chr7 (201-247)||(2953582-2953628)
chr7 (160-234)||(9078189-9078263)
chr7 (190-271)||(12329668-12329749)
chr7 (160-260)||(9731629-9731730)
chr7 (185-244)||(13418545-13418606)
chr7 (185-245)||(39273202-39273263)
chr7 (191-254)||(3734598-3734662)
chr7 (204-255)||(8054535-8054587)
chr7 (161-221)||(8938242-8938302)
chr7 (204-260)||(9130902-9130958)
chr7 (185-260)||(16297847-16297923)
chr7 (185-260)||(17077124-17077200)
chr7 (160-255)||(18662442-18662538)
[»] chr1 (38 HSPs)
chr1 (160-271)||(26540881-26540992)
chr1 (185-260)||(21847630-21847705)
chr1 (184-260)||(16359867-16359943)
chr1 (160-271)||(17610258-17610369)
chr1 (160-271)||(27117720-27117831)
chr1 (160-263)||(10064573-10064676)
chr1 (160-230)||(24306958-24307028)
chr1 (160-271)||(17837503-17837614)
chr1 (185-255)||(21449090-21449161)
chr1 (160-270)||(24306308-24306417)
chr1 (161-260)||(12012803-12012903)
chr1 (160-255)||(12208602-12208698)
chr1 (160-255)||(13345338-13345434)
chr1 (185-260)||(23038039-23038114)
chr1 (193-260)||(26649006-26649073)
chr1 (160-255)||(29242520-29242616)
chr1 (160-271)||(33190663-33190774)
chr1 (201-255)||(15544009-15544064)
chr1 (160-219)||(17017719-17017778)
chr1 (193-260)||(17121515-17121582)
chr1 (160-253)||(9401511-9401602)
chr1 (160-260)||(24267784-24267885)
chr1 (185-260)||(9787906-9787982)
chr1 (185-260)||(17359158-17359234)
chr1 (190-248)||(51473908-51473965)
chr1 (185-255)||(18736267-18736338)
chr1 (160-242)||(21666610-21666693)
chr1 (185-255)||(25405657-25405728)
chr1 (190-271)||(3591685-3591766)
chr1 (185-260)||(15813551-15813628)
chr1 (160-260)||(147627-147728)
chr1 (201-253)||(16179010-16179063)
chr1 (160-248)||(22664214-22664303)
chr1 (160-245)||(25958120-25958205)
chr1 (184-260)||(34480965-34481042)
chr1 (191-242)||(24214558-24214610)
chr1 (193-248)||(24281285-24281341)
chr1 (224-260)||(32383065-32383101)
[»] chr5 (32 HSPs)
chr5 (160-271)||(15544036-15544147)
chr5 (160-271)||(28253266-28253377)
chr5 (185-271)||(18208276-18208361)
chr5 (160-267)||(23380259-23380367)
chr5 (160-271)||(32417358-32417469)
chr5 (186-260)||(24266983-24267057)
chr5 (186-260)||(24343614-24343688)
chr5 (201-271)||(26121367-26121436)
chr5 (160-254)||(34487640-34487734)
chr5 (185-256)||(36175134-36175205)
chr5 (160-220)||(23014612-23014671)
chr5 (185-271)||(15375909-15375996)
chr5 (160-254)||(17171555-17171650)
chr5 (160-270)||(17185449-17185560)
chr5 (185-271)||(22755507-22755593)
chr5 (160-271)||(27921404-27921514)
chr5 (186-255)||(19004254-19004324)
chr5 (191-260)||(19086212-19086282)
chr5 (209-271)||(26110513-26110574)
chr5 (185-260)||(25550531-25550607)
chr5 (224-271)||(17769462-17769509)
chr5 (201-271)||(19283898-19283968)
chr5 (160-245)||(24852174-24852260)
chr5 (160-244)||(24140454-24140539)
chr5 (185-260)||(15469932-15470008)
chr5 (184-271)||(17431869-17431956)
chr5 (162-246)||(20534057-20534141)
chr5 (160-257)||(39434462-39434559)
chr5 (160-244)||(20315432-20315517)
chr5 (185-257)||(23388865-23388937)
chr5 (160-220)||(23265191-23265251)
chr5 (185-260)||(25402364-25402440)
[»] chr2 (31 HSPs)
chr2 (160-271)||(8447052-8447163)
chr2 (162-271)||(12557713-12557822)
chr2 (160-265)||(25070119-25070224)
chr2 (164-271)||(8503076-8503184)
chr2 (163-271)||(25939143-25939251)
chr2 (160-255)||(17743478-17743574)
chr2 (159-271)||(18553908-18554020)
chr2 (160-260)||(25888226-25888323)
chr2 (160-271)||(32439999-32440110)
chr2 (160-262)||(18539980-18540082)
chr2 (160-260)||(12953296-12953397)
chr2 (160-245)||(17349368-17349453)
chr2 (190-255)||(23011795-23011860)
chr2 (160-260)||(29719233-29719334)
chr2 (160-232)||(15454732-15454804)
chr2 (196-255)||(27909157-27909217)
chr2 (160-255)||(29883225-29883325)
chr2 (160-271)||(25936907-25937018)
chr2 (185-271)||(32085449-32085535)
chr2 (173-271)||(18548071-18548169)
chr2 (185-254)||(20174662-20174732)
chr2 (185-260)||(15339234-15339310)
chr2 (160-271)||(45621883-45621994)
chr2 (160-238)||(25618574-25618653)
chr2 (185-271)||(30411664-30411750)
chr2 (185-271)||(17889923-17890008)
chr2 (160-233)||(27418389-27418463)
chr2 (201-254)||(31804943-31804997)
chr2 (201-237)||(13708183-13708219)
chr2 (185-260)||(26603377-26603453)
chr2 (203-271)||(27869784-27869852)
[»] chr8 (29 HSPs)
chr8 (182-271)||(31288343-31288432)
chr8 (160-271)||(26008008-26008120)
chr8 (180-271)||(24119791-24119882)
chr8 (160-260)||(29382363-29382464)
chr8 (160-271)||(5850927-5851038)
chr8 (163-234)||(17972193-17972264)
chr8 (185-248)||(44011051-44011114)
chr8 (162-255)||(26615246-26615339)
chr8 (184-271)||(17101919-17102006)
chr8 (160-239)||(15292748-15292827)
chr8 (160-239)||(15473117-15473196)
chr8 (185-260)||(24269594-24269669)
chr8 (164-239)||(28317431-28317506)
chr8 (193-239)||(24644855-24644901)
chr8 (186-260)||(30122183-30122257)
chr8 (160-260)||(15238795-15238896)
chr8 (160-271)||(14075579-14075691)
chr8 (185-260)||(24114309-24114385)
chr8 (204-271)||(12268182-12268249)
chr8 (185-271)||(25182455-25182541)
chr8 (190-248)||(30783773-30783832)
chr8 (159-271)||(17969399-17969512)
chr8 (201-260)||(5052964-5053024)
chr8 (160-239)||(14006112-14006192)
chr8 (185-260)||(14528145-14528221)
chr8 (160-246)||(2637608-2637695)
chr8 (224-271)||(19786717-19786763)
chr8 (201-255)||(24110698-24110753)
chr8 (199-246)||(34497125-34497173)
[»] chr6 (41 HSPs)
chr6 (160-270)||(9385941-9386051)
chr6 (163-248)||(34478533-34478618)
chr6 (160-260)||(15466366-15466466)
chr6 (160-267)||(26215389-26215495)
chr6 (173-271)||(20722192-20722289)
chr6 (160-271)||(9726008-9726119)
chr6 (160-271)||(28586032-28586144)
chr6 (193-260)||(21672470-21672538)
chr6 (172-271)||(31629127-31629227)
chr6 (185-255)||(12183358-12183429)
chr6 (160-257)||(9516784-9516882)
chr6 (193-260)||(21679886-21679954)
chr6 (185-248)||(23645794-23645858)
chr6 (160-271)||(23844467-23844578)
chr6 (160-254)||(21688797-21688892)
chr6 (185-271)||(21907418-21907504)
chr6 (193-271)||(25927338-25927416)
chr6 (204-270)||(8039178-8039243)
chr6 (201-260)||(9899001-9899062)
chr6 (201-254)||(17729154-17729208)
chr6 (193-257)||(20005914-20005979)
chr6 (184-240)||(22410353-22410410)
chr6 (191-271)||(22567826-22567906)
chr6 (201-260)||(4339731-4339791)
chr6 (186-232)||(9838380-9838427)
chr6 (185-271)||(11176936-11177022)
chr6 (192-271)||(15614218-15614297)
chr6 (160-271)||(33655903-33656013)
chr6 (160-230)||(9386070-9386140)
chr6 (159-271)||(7542961-7543073)
chr6 (190-246)||(17299863-17299920)
chr6 (214-271)||(20426551-20426608)
chr6 (160-248)||(22566164-22566253)
chr6 (160-260)||(27737691-27737792)
chr6 (182-270)||(28589454-28589543)
chr6 (209-248)||(5624648-5624688)
chr6 (201-260)||(8241273-8241333)
chr6 (209-260)||(14079495-14079547)
chr6 (160-255)||(17827094-17827190)
chr6 (209-260)||(21932103-21932155)
chr6 (185-260)||(23143718-23143794)
[»] chr4 (45 HSPs)
chr4 (190-271)||(10106996-10107077)
chr4 (160-260)||(13128876-13128977)
chr4 (160-271)||(15050085-15050196)
chr4 (160-271)||(15104228-15104339)
chr4 (160-260)||(17671998-17672099)
chr4 (160-271)||(9052660-9052770)
chr4 (160-263)||(19900573-19900676)
chr4 (160-260)||(13692671-13692772)
chr4 (191-255)||(17709758-17709823)
chr4 (201-260)||(19374856-19374915)
chr4 (160-266)||(1833599-1833702)
chr4 (186-255)||(22175990-22176060)
chr4 (160-254)||(25643465-25643559)
chr4 (160-255)||(13908855-13908951)
chr4 (160-255)||(19492702-19492798)
chr4 (160-247)||(25121228-25121315)
chr4 (221-271)||(11093949-11093999)
chr4 (190-268)||(22345009-22345087)
chr4 (190-271)||(20317810-20317891)
chr4 (201-260)||(11700612-11700672)
chr4 (201-260)||(14648891-14648951)
chr4 (160-271)||(15164753-15164864)
chr4 (200-271)||(17951338-17951409)
chr4 (200-271)||(17955190-17955261)
chr4 (160-271)||(19882626-19882737)
chr4 (203-260)||(5679201-5679259)
chr4 (193-254)||(13992911-13992973)
chr4 (191-271)||(7582283-7582363)
chr4 (160-272)||(11490517-11490629)
chr4 (190-255)||(26115936-26116001)
chr4 (183-254)||(12839805-12839877)
chr4 (185-248)||(17216825-17216889)
chr4 (160-255)||(20315001-20315097)
chr4 (160-271)||(21323877-21323988)
chr4 (224-271)||(9737576-9737622)
chr4 (184-254)||(19636612-19636682)
chr4 (185-255)||(19929702-19929773)
chr4 (182-248)||(22526372-22526439)
chr4 (160-271)||(40215320-40215431)
chr4 (185-254)||(11521218-11521288)
chr4 (191-260)||(20829772-20829841)
chr4 (199-245)||(22218642-22218688)
chr4 (160-260)||(23080337-23080438)
chr4 (191-271)||(3774811-3774890)
chr4 (212-260)||(8969776-8969824)
[»] chr3 (31 HSPs)
chr3 (160-260)||(21301914-21302015)
chr3 (160-271)||(20429696-20429807)
chr3 (173-271)||(27542930-27543028)
chr3 (183-271)||(12759372-12759461)
chr3 (160-271)||(12805892-12806003)
chr3 (160-246)||(20339766-20339852)
chr3 (182-271)||(7147974-7148062)
chr3 (160-260)||(16245731-16245832)
chr3 (193-254)||(21825904-21825965)
chr3 (163-271)||(28728929-28729038)
chr3 (160-271)||(6289889-6290000)
chr3 (191-271)||(31286048-31286127)
chr3 (187-270)||(23056200-23056283)
chr3 (191-260)||(10917914-10917984)
chr3 (201-254)||(8143617-8143670)
chr3 (203-260)||(18736717-18736774)
chr3 (193-248)||(821549-821605)
chr3 (185-248)||(10744910-10744974)
chr3 (160-271)||(25756660-25756772)
chr3 (209-271)||(12752192-12752254)
chr3 (201-260)||(2167660-2167719)
chr3 (185-233)||(8445846-8445894)
chr3 (160-239)||(8557131-8557211)
chr3 (201-260)||(18458467-18458527)
chr3 (160-254)||(17438433-17438527)
chr3 (201-255)||(19908308-19908363)
chr3 (201-255)||(22349410-22349465)
chr3 (178-248)||(21019616-21019686)
chr3 (162-248)||(21074542-21074628)
chr3 (160-260)||(3116421-3116521)
chr3 (201-260)||(21325336-21325396)
[»] scaffold0016 (2 HSPs)
scaffold0016 (160-267)||(12098-12206)
scaffold0016 (185-257)||(3531-3603)
[»] scaffold0042 (1 HSPs)
scaffold0042 (190-254)||(29909-29973)
[»] scaffold0008 (2 HSPs)
scaffold0008 (190-271)||(54846-54927)
scaffold0008 (189-246)||(48223-48279)
[»] scaffold0394 (1 HSPs)
scaffold0394 (160-271)||(13907-14021)
[»] scaffold0957 (1 HSPs)
scaffold0957 (184-260)||(3149-3225)
[»] scaffold0622 (1 HSPs)
scaffold0622 (185-260)||(724-800)
[»] scaffold0043 (1 HSPs)
scaffold0043 (160-260)||(89856-89956)
[»] scaffold0085 (1 HSPs)
scaffold0085 (173-248)||(22289-22364)
[»] scaffold0048 (1 HSPs)
scaffold0048 (160-270)||(78580-78691)
[»] scaffold0653 (1 HSPs)
scaffold0653 (160-244)||(4485-4570)
[»] scaffold0005 (1 HSPs)
scaffold0005 (201-260)||(168341-168401)
[»] scaffold0838 (1 HSPs)
scaffold0838 (185-255)||(2371-2442)
[»] scaffold0832 (1 HSPs)
scaffold0832 (185-255)||(2402-2473)
[»] scaffold0598 (1 HSPs)
scaffold0598 (204-271)||(5321-5387)
[»] scaffold0019 (1 HSPs)
scaffold0019 (160-271)||(11225-11337)
[»] scaffold0136 (1 HSPs)
scaffold0136 (190-271)||(15497-15578)
[»] scaffold0102 (1 HSPs)
scaffold0102 (160-244)||(35549-35634)


Alignment Details
Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 159 - 333
Target Start/End: Original strand, 26134749 - 26134923
Alignment:
Q  159 gaataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||| ||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26134749 gaataagtaacgtgaattgtctagttgaaatgacagtctatgtggatacgatactctacttacattttattacttggtaaacgatttggtacacttgtct 26134848  T
Q  259 aaatccgaccatcgcacacataacgatggtcggaattggatttgtaaaacaacaaccatcggagaccacatccga 333  Q
    |||||| |||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26134849 aaatccaaccatcacacacttaatgatggtcgaaattggatttgtaaaacaacaaccatcggagaccacatccga 26134923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 23093394 - 23093295
Alignment:
Q  172 gaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||||||||||| |||||||||  | |||||||||||||||||||| |||||||||| |||||||||||||| |||||| ||||||  |||||||    
T  23093394 gaattgcctagttgaaacgacaatccacgtagatacaatactctacttacactttattacttagtaaacgatttggtacacttgcctaaatatgaccatc 23093295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 26134628 - 26134702
Alignment:
Q  34 acattatgtaataaaaaataggttacttttagacactcactctgagaaaaccaatcaaatttccaaactcccccc 108  Q
    ||||| |||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||    
T  26134628 acattctgtaataaaaaataggttacttttagactcacactctgaaaaaaccaatcaaatttccaaactcccccc 26134702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 262
Target Start/End: Original strand, 4258891 - 4258990
Alignment:
Q  163 aagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaat 262  Q
    ||||||| | ||||||||||||||||  ||||||  ||||||||| |||||||| ||||||||||||| ||||||||||||||| | |||||||||||||    
T  4258891 aagtaacacaaattgcctagttgaaacaacaatcattatggatacgatactctagttacattttattatttggtaaacgatttgttacacttgtctaaat 4258990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 15303623 - 15303725
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||| ||||| |||||||| || |||||| | | | ||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||||    
T  15303623 aataagtaacgtgaatttcctagttggaacgacaattcgtgtagatacgatactttacttacactttattacctggtaaacgatttggtacacttgtcta 15303722  T
Q  260 aat 262  Q
    |||    
T  15303723 aat 15303725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 2563889 - 2563819
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  2563889 gaaacgacaatccttgtggatacgatactctacttacactttattacttggtaaacgatttggtacacttg 2563819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 10937676 - 10937587
Alignment:
Q  183 ttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||| |||||||||| ||||||| ||||| |||||| || ||||||||||||||||||||||| | |||||| |||||||| ||||||    
T  10937676 ttgaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaacgatttgatacacttgcctaaatccaaccatc 10937587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 6042516 - 6042457
Alignment:
Q  201 tggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||    
T  6042516 tggatacgatactctacttacattttattacatggtaaacgatttgatacacttgtctaa 6042457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 7318345 - 7318259
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||| |||| |||||| || ||||||||||||    
T  7318345 gaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatatggtacacttgcct-aatccgaccatc 7318259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 5047442 - 5047500
Alignment:
Q  213 tctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||||| |||||||||||||||| |||||||| |||||| |||||||||||||||    
T  5047442 tctacttacactttattacttggtaaatgatttggtacacttgcctaaatccgaccatc 5047500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 4986627 - 4986551
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||||| ||| ||| |||||||||| | || ||||||||||||||||||||||||| |||||||||||    
T  4986627 gaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacacttgtctaa 4986551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 4990725 - 4990649
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||||| ||| ||| |||||||||| | || ||||||||||||||||||||||||| |||||||||||    
T  4990725 gaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacacttgtctaa 4990649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 7397262 - 7397198
Alignment:
Q  190 gacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcactt 254  Q
    |||||||||| ||||||| |||||||| ||||| |||||||||||||||||| |||||| |||||    
T  7397262 gacaatccatgtggatacgatactctagttacactttattacttggtaaacggtttggtacactt 7397198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 9261276 - 9261216
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatt 244  Q
    ||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||    
T  9261276 gaaatgacaatccatatggatacgatactctgcttatcatttttttacttggtaaacgatt 9261216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 11221166 - 11221262
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||||||| |||||  ||   |||| |||||||| | |||||||||||||||||||| || |||||||||| |||||||||||||| ||||||    
T  11221166 aataagtaacgcaaattgtttacacgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatttggtacacttg 11221262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 18449339 - 18449227
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||  | | ||||| |||||||| ||||||||| ||| | |||||  || ||||||||||||||||| ||||| | |||||| ||    
T  18449339 aataagtaacgccaattgtttggctgaaacgacaatccctatggatacgatattatacttctcactttattacttggtaaacaatttgatacacttgcct 18449240  T
Q  259 aaatccgaccatc 271  Q
    |||||||||||||    
T  18449239 aaatccgaccatc 18449227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 2453829 - 2453718
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||| ||||||| ||||||| ||  | |||| || || |||| |||||||||||| ||||||||||||| ||||| ||||  | |||||| |||    
T  2453829 aataagtaacacgaattgtctagttggaacaataatctatgtgaatacgatactctacttaaattttattacttgataaacaatttaatacacttgccta 2453730  T
Q  260 aatccgaccatc 271  Q
    ||||| ||||||    
T  2453729 aatccaaccatc 2453718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 270
Target Start/End: Original strand, 9864328 - 9864438
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||  |||  |||| |||||||| | ||||||  |||||||||||| || ||||||||||||||||| ||||||| |||||| ||    
T  9864328 aataagtaacgcaaattgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgcct 9864427  T
Q  259 aaatccgaccat 270  Q
     |||||||||||    
T  9864428 -aatccgaccat 9864438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 18369007 - 18369078
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||| |||||||||||||||||||||| || ||||||||||||||||| |||| || ||||||    
T  18369007 gaaacgacaatccctatggatacaatactctacttatcactttattacttggtaaactatttagtacacttg 18369078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 5108637 - 5108567
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||| | ||||||| |||||||||||||| ||||||||||||||||  ||||||| ||||||    
T  5108637 gaaacgacaatccttgtggatacgatactctacttacactttattacttggtaaataatttggtacacttg 5108567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 9916641 - 9916551
Alignment:
Q  182 gttgaaatgacaatccatatggatacaatactctacttac-attttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||  ||||||||| ||||||| ||||||||||||  | |||||||| ||||||| ||||||||  ||||| |||||||||||||||    
T  9916641 gttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgcctaaatccgaccatc 9916551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 9924553 - 9924463
Alignment:
Q  182 gttgaaatgacaatccatatggatacaatactctacttac-attttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||  ||||||||| ||||||| ||||||||||||  | |||||||| ||||||| ||||||||  ||||| |||||||||||||||    
T  9924553 gttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgcctaaatccgaccatc 9924463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 9245278 - 9245193
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatt 244  Q
    |||||||||| |||||||  ||   ||||||||||||||| ||||||| ||||||| |||| |||||| |||||||||||||||||    
T  9245278 aataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgatt 9245193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 10584512 - 10584589
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||| |||||||||| ||||||| ||||| | |||| || ||||||||||| ||||||||||||| |||||||||||    
T  10584512 tgaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatttggtacacttgtctaa 10584589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 21227276 - 21227187
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    |||||||||||||||||||||||||  || || ||| ||| | ||||| |||||||||||| || |||||||||| ||||| ||||||||    
T  21227276 aataagtaacgcgaattgcctagttagaacgagaattcatgtagatacgatactctacttatcactttattactttgtaaatgatttggt 21227187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 10587051 - 10587127
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||| | | ||||| |||||||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  10587051 gaaacgacaatccctgtagatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaa 10587127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 23099979 - 23100055
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| ||||||| || ||||||| |||||||||||| || ||||||| ||||||||||||||||| |||||| ||||    
T  23099979 gaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaa 23100055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 2350779 - 2350850
Alignment:
Q  190 gacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||| ||||||| ||| |||||||| || |||||||||||||||| |||||||| |||||| ||||    
T  2350779 gacaatccatgtggatacgataatctacttagcagtttattacttggtaaatgatttggtacacttgcctaa 2350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 8054085 - 8054156
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||| ||| ||||||| |||||||| ||| || ||||||||||||||||||||||||| ||||||    
T  8054085 gaaacgacaattcatgtggatacgatactctaattatcactttattacttggtaaacgatttggtacacttg 8054156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 9866543 - 9866638
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||||||| |||||| ||||||  || ||||||   | ||||||  |||||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  9866543 aataagtaacgtgaattgtctagttagaacgacaattattgtggatatgatactctacttacactttattatttggtaaacaatttggtacacttg 9866638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 16365772 - 16365701
Alignment:
Q  190 gacaatccatatggatacaatactctacttac-attttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||| ||||||| |||||||||||   | ||||||||||||||||||||||||| ||||| |||||    
T  16365772 gacaatccatgtggatacgatactctactttttactttattacttggtaaacgatttggtacacttttctaa 16365701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 21230409 - 21230322
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttg 246  Q
    |||||||||| | |||||| |||  |||| || ||||| |||| |||| |||||||||||| |||||||||| |||||||||||||||    
T  21230409 aataagtaacacaaattgcttagacgaaacgataatccctatgaatacgatactctacttatcattttattatttggtaaacgatttg 21230322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 6005903 - 6005845
Alignment:
Q  190 gacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggt 248  Q
    |||||||||| |||||||||||||||  ||||| ||||||| ||||||||| |||||||    
T  6005903 gacaatccatgtggatacaatactctggttacaatttattaattggtaaacaatttggt 6005845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 31492997 - 31492931
Alignment:
Q  190 gacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||||| ||||||| |||||||||||| || |||||||| |||||||||||||| | ||||||    
T  31492997 gacaatccatgtggatacgatactctacttatcactttattacctggtaaacgatttgatacacttg 31492931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 8979039 - 8979119
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||| ||||||  |||||||||||| || |||||||||||||||| |||||||| ||||| || | |||||||||||    
T  8979039 acaatccatgtggatatgatactctacttatcactttattacttggtaaatgatttggtacactt-tccatatccgaccatc 8979119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 9890237 - 9890168
Alignment:
Q  203 gatacaatactctacttac-attttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||| ||||||||||||| | ||||||||| |||||||||||| || ||||||  ||||||||||||||    
T  9890237 gatacgatactctacttactactttattactcggtaaacgatttagtacacttgcttaaatccgaccatc 9890168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 3329684 - 3329740
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaa 239  Q
    ||||| |||||||||| ||||||| |||||||||||| || ||||||||||||||||    
T  3329684 tgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaa 3329740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 5797608 - 5797497
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttac-attttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||| | |||||  | |||||  ||||||| ||| ||||||| ||||||||||||  | ||||||||||||||| ||||||| | |||||| ||    
T  5797608 aataagtaacacaaattgtttggttgatttgacaattcatgtggatacgatactctacttattactttattacttggtaagcgatttgttacacttgcct 5797509  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  5797508 -aatccgaccatc 5797497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 16306791 - 16306680
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||| || |||||  ||| |||||||| ||||| | | ||||| |||||||||||| || ||||||||||| |||| |||||  | |||||||||    
T  16306791 aataagtaatgcaaattgtttagatgaaatgataatccttgtagatacgatactctacttatcactttattacttgttaaaggattttatacacttgtct 16306692  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  16306691 -aatccgaccatc 16306680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 17153156 - 17153267
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||  ||  |||  |||| ||||||| || ||||||| |||||||||||| || ||| ||||||||||||| ||||| | ||||| |||    
T  17153156 aataagtaacgcgagctgtttagacgaaacgacaatctatgtggatacgatactctacttatcactttcttacttggtaaactatttgatacacttttct 17153255  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  17153256 -aatccgaccatc 17153267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 264
Target Start/End: Complemental strand, 20174668 - 20174564
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||||||| || ||| |||  || || ||||||| |  || | |||||||| ||||| |||||||| | ||||||||||||||  |||||||||    
T  20174668 aataagtaacgcgagtttcctcgttagaacgaaaatccatgttaatgcgatactctagttacactttattacctagtaaacgatttggtatacttgtcta 20174569  T
Q  260 aatcc 264  Q
    |||||    
T  20174568 aatcc 20174564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 33035569 - 33035458
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||| | ||||||||||||||  | ||||| |||  | ||| | ||||||||| || || ||||||||| ||||||||||||| | |||||| ||    
T  33035569 aataagtaatgtgaattgcctagttggtacgacaagccacgtagatgcgatactctacctatcactttattact-ggtaaacgatttgatacacttgcct 33035471  T
Q  259 aaatccgaccatc 271  Q
    |||||||||||||    
T  33035470 aaatccgaccatc 33035458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 13759862 - 13759957
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    ||||||||||||||| ||  | |  |||| |||||||| | ||||||  |||||||||||| || ||||||| ||||||||||||||||| |||||    
T  13759862 aataagtaacgcgaactgtttggacgaaacgacaatccttgtggatatgatactctacttatcactttattaattggtaaacgatttggtacactt 13759957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 15869650 - 15869591
Alignment:
Q  202 ggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||| |||||||||||| || ||||||||||||||||||||||| | |||||| ||||    
T  15869650 ggatacgatactctacttatcactttattacttggtaaacgatttgatacacttgcctaa 15869591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 18661646 - 18661591
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||||||||||||||| || ||||||  ||||||||||||||||| ||||||    
T  18661646 tggatacaatactctacttatcactttattgtttggtaaacgatttggtacacttg 18661591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 2953628 - 2953582
Alignment:
Q  201 tggatacaatactctacttacattttattacttggtaaacgatttgg 247  Q
    ||||||| |||||||||||||| ||||||| ||| ||||||||||||    
T  2953628 tggatacgatactctacttacactttattatttgataaacgatttgg 2953582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 9078263 - 9078189
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttg 234  Q
    |||||||||||| |||||| |||||  || || ||||| | ||||||| ||| |||||||||||| |||||||||    
T  9078263 aataagtaacgcaaattgcttagtttgaacgataatccctgtggatacgataatctacttacattctattacttg 9078189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 12329749 - 12329668
Alignment:
Q  190 gacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||| | ||||||| |||||||| ||| || ||| ||||||||||||||||||||| || ||| || ||||||||||||    
T  12329749 gacaatccttgtggatactatactctatttatcaatttcttacttggtaaacgatttggtacatttgcct-aatccgaccatc 12329668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 9731629 - 9731730
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  | |  |||| |||||||| | ||| ||| |||||||||||| || |||| |||||  ||||||||||||| |||||| ||    
T  9731629 aataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcactttactactttttaaacgatttggtacacttgcct 9731728  T
Q  259 aa 260  Q
    ||    
T  9731729 aa 9731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 13418606 - 13418545
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-ca-ttttattacttggtaaacgatt 244  Q
    |||| |||||||| ||||||||| |||||||||||| || |||||||||||||| |||||||    
T  13418606 gaaaggacaatccctatggatacgatactctacttatcacttttattacttggttaacgatt 13418545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 39273202 - 39273263
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgattt 245  Q
    |||| ||||||||||||| |||| |||||||||||| || |||||||||| |||||| ||||    
T  39273202 gaaacgacaatccatatgaatacgatactctacttatcactttattacttagtaaacaattt 39273263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 3734662 - 3734598
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    ||||| ||| ||||||| |||||||||||| || ||||||||||||||||  ||||||| |||||    
T  3734662 acaattcatgtggatacgatactctacttatcactttattacttggtaaaaaatttggtacactt 3734598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 8054535 - 8054587
Alignment:
Q  204 atacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||||||| || ||||||| ||||||||||||||||| ||||||    
T  8054535 atacgatactctacttatcactttattatttggtaaacgatttggtacacttg 8054587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 8938242 - 8938302
Alignment:
Q  161 ataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttac 221  Q
    |||||||| | |||||||||||||| || |||||||||| |||||   |||||||||||||    
T  8938242 ataagtaatgtgaattgcctagttggaacgacaatccatttggatttgatactctacttac 8938302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 9130958 - 9130902
Alignment:
Q  204 atacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||| |||||||| ||||||||||| ||||| ||||| | |||||| ||||    
T  9130958 atacaatactatacttacactttattacttgataaacaatttgatacacttgcctaa 9130902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 16297847 - 16297923
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||||||||||| || |||| ||| |||||||| ||  |||||||||||||||  ||||||| |||||| ||||    
T  16297847 gaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaattatttggtacacttgcctaa 16297923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 17077200 - 17077124
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| ||||||||  |||||||||||||||||| || || ||||||| ||| ||||| ||||||| || ||||||||    
T  17077200 gaaacgacaatccccatggatacaatactctacctatcactttattatttgataaacaatttggtacatttgtctaa 17077124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 18662538 - 18662442
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||||||| ||||||  | |  |||| |||||||| | ||||||| |||||||||||| || |||| | |||||||||||||||| | ||||||    
T  18662538 aataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttagtgcttggtaaacgatttgatacacttg 18662442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 26540992 - 26540881
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||||| ||||| ||||||| ||||| ||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||| |||    
T  26540992 aataagtaacgcaaattgtctagttggaatgataatccttgtggatacgatactctacttacactttattacttggtaaacgatttggtacacttgccta 26540893  T
Q  260 aatccgaccatc 271  Q
    ||||||||||||    
T  26540892 aatccgaccatc 26540881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 21847705 - 21847630
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||    
T  21847705 gaaacgacaatccatgtggatacaatactctacttagactttattacttggtaaacgatttggtacacttgcctaa 21847630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 16359943 - 16359867
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||| |||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  16359943 tgaaacgacagtacatgtggatacaatactatacttacattttattacttggtaaacgatttggtacacttgcctaa 16359867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 17610258 - 17610369
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacat-tttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||| ||||||  | |  |||| |||||||||| ||||||| |||||||||||| |  ||||||||||||||||||||||||| ||||||||     
T  17610258 aataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttattacttggtaaacgatttggtacacttgtc- 17610356  T
Q  259 aaatccgaccatc 271  Q
    | |||||||||||    
T  17610357 atatccgaccatc 17610369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 27117720 - 27117831
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||  ||||  | ||||||| |||||| ||| || ||||||||||||||||| || |||||||||||||||||||||||||  ||||| ||    
T  27117720 aataagtaacgcagattgtttggttgaaacgacaattcatgtgaatacaatactctacttatcactttattacttggtaaacgatttggtaaacttgcct 27117819  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  27117820 -aatccgaccatc 27117831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 263
Target Start/End: Original strand, 10064573 - 10064676
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||| | |||||||||||||  || || ||||| | ||||||  ||| ||||| | |||||||||||||||||||||||||||| ||||||| ||    
T  10064573 aataagtaatgagaattgcctagtttgaacgaaaatccttgtggatatgatattctacctgcattttattacttggtaaacgatttggtacacttgttta 10064672  T
Q  260 aatc 263  Q
    ||||    
T  10064673 aatc 10064676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 24306958 - 24307028
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttatta 230  Q
    ||||||||||| ||||||| ||||||||| |||||||| |||| |||| |||||||||||||| |||||||    
T  24306958 aataagtaacgtgaattgcttagttgaaacgacaatccctatgaatacgatactctacttacactttatta 24307028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 17837614 - 17837503
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacat-tttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  |||   |||||||||||| | ||||||  |||||||||||| |  ||||||||||||||||| ||||||| |||||| ||    
T  17837614 aataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttggtaaacaatttggtacacttgcct 17837515  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  17837514 -aatccgaccatc 17837503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 21449161 - 21449090
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||| | ||||||| |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  21449161 gaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 21449090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 270
Target Start/End: Original strand, 24306308 - 24306417
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||||||||   | ||||||| | |||||| | ||||||| |||||||||||| || ||||||||||||||||||| ||||| |||||| |     
T  24306308 aataagtaacgcgaattatttggttgaaacg-caatccctgtggatacgatactctacttatcactttattacttggtaaacgacttggtacacttg-cc 24306405  T
Q  259 aaatccgaccat 270  Q
    ||||||||||||    
T  24306406 aaatccgaccat 24306417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 12012803 - 12012903
Alignment:
Q  161 ataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||||||| |  ||| | ||| |||||| ||| |||||||||||||||||||| || |||| |||||| ||||||||||| | |||||| |||    
T  12012803 ataagtaacgcgaatagtttagataaaacgacaattcatgtggatacaatactctacttatcactttaatacttgataaacgatttgatacacttgccta 12012902  T
Q  260 a 260  Q
    |    
T  12012903 a 12012903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 12208698 - 12208602
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||||||||||||||  | |  |||| |||||||||| ||||||  ||| |||||||| || |||||||||||||||||||||| || ||||||    
T  12208698 aataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctacttatcactttattacttggtaaacgatttagtacacttg 12208602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 13345338 - 13345434
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||||||||||||||  | |   ||| |||||||||| ||||||  |||||||||||| || ||||||||||||||||| ||||||| ||||||    
T  13345338 aataagtaacgcgaattgtttggacaaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttg 13345434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 23038039 - 23038114
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||||| ||||||| |||||| ||||| || ||||||||||||||||||||||||| |||||| ||||    
T  23038039 gaaacgacaatccatgtggatacgatactc-acttatcactttattacttggtaaacgatttggtacacttgcctaa 23038114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 26649006 - 26649073
Alignment:
Q  193 aatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| ||||||||||| || ||||| |||||||||||||||||||||||||| | |||||||||||    
T  26649006 aatccatgtggatacaatattc-acttatcattttattacttggtaaacgatttgatacacttgtctaa 26649073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 29242616 - 29242520
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||||||||  | | ||||| |||||||  ||||||||| |||||||||||| || ||||||||||| ||||| ||||||| ||||||    
T  29242616 aatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattacttgataaacaatttggtacacttg 29242520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 33190774 - 33190663
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||| ||| |||  ||| ||||| ||||||   | ||||||  |||||||||||| |||||||||||||| ||||||||||||| ||| |||||    
T  33190774 aataagtaacacgagttgtttagatgaaacgacaattgttgtggatattatactctacttatcattttattacttgataaacgatttggtacacctgtct 33190675  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  33190674 -aatccgaccatc 33190663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 15544009 - 15544064
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  15544009 tggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 15544064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 17017719 - 17017778
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactt 219  Q
    ||||||||||| |||||||||||||| ||||| ||||||| | ||||| |||||||||||    
T  17017719 aataagtaacgtgaattgcctagttggaatgaaaatccatgtcgatacgatactctactt 17017778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 17121515 - 17121582
Alignment:
Q  193 aatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||| ||||||||  |||||||||||||| ||||||||||| ||||| ||||| | |||||||||||    
T  17121515 aatccttatggatatgatactctacttacactttattacttgataaacaatttgatacacttgtctaa 17121582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 9401602 - 9401511
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcact 253  Q
    ||||||||||||||||||  | |  |||| |||||| ||| ||||||| |||||||||||||  |||||||| |||||||| ||||||| ||||    
T  9401602 aataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctacttac--tttattacctggtaaactatttggtacact 9401511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 24267784 - 24267885
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||| ||||||  |||  ||||  |||||| |||||||||  ||||| |||||| |||||||||||||| |||| |||||| | |||||||||    
T  24267784 aataagtaacgtgaattgattagacgaaacaacaatctatatggatatgatactatacttatcattttattacttgataaatgatttgatacacttgtct 24267883  T
Q  259 aa 260  Q
    ||    
T  24267884 aa 24267885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 9787906 - 9787982
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| ||||||  |||||||||| |||||||||||| || ||||||||||| |||| |||||||| |||||| ||||    
T  9787906 gaaacgacaatttatatggatacgatactctacttatcactttattacttgctaaatgatttggtacacttgcctaa 9787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 17359234 - 17359158
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||  ||||||||  |||||| ||||| || ||||||||||||||||||||||||| |||||| ||||    
T  17359234 gaaacgacaatctttatggatatgatactcaacttatcactttattacttggtaaacgatttggtacacttgcctaa 17359158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 51473908 - 51473965
Alignment:
Q  190 gacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    |||||||||||||||||| |||||||||||| || ||||||||  |||||||||||||||    
T  51473908 gacaatccatatggatacgatactctacttatcactttattac--ggtaaacgatttggt 51473965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 18736267 - 18736338
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||| | ||||||| |||| ||||||| || ||||||||||| ||||||||||||| ||||||    
T  18736267 gaaacgacaatccctgtggatacgatacactacttatcactttattacttgttaaacgatttggtacacttg 18736338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 21666610 - 21666693
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacga 242  Q
    ||||||||||| ||||||  | |  |||| |||||||||| ||||||| |||||||||||| || ||||||||||||| |||||    
T  21666610 aataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttattacttggttaacga 21666693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 25405657 - 25405728
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||| | ||||||| ||||| |||||| || ||||||||||||||||||| ||||| ||||||    
T  25405657 gaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaacgacttggtacacttg 25405728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 3591685 - 3591766
Alignment:
Q  190 gacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||| || ||||||| |||||||| ||| || ||||||||||| |||||||||| || |||||| || ||||||||||||    
T  3591685 gacaatctatgtggatacgatactctatttatcactttattacttgataaacgattttgtacacttgcct-aatccgaccatc 3591766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 15813551 - 15813628
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactt--acattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||| | |||||||||||||||||||   || ||||||  ||| ||||||||||||| |||||||||||    
T  15813551 gaaacgacaatccttgtggatacaatactctactttatcactttattttttgataaacgatttggtacacttgtctaa 15813628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 147728 - 147627
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||  ||  |||  ||||||||||||||| || |||  |||||| ||||| || |||||||||||  |||||||||| | |||||||||    
T  147728 aataagtaacgcgagctgtttagacgaaatgacaatccatgtgaatatgatactccacttatcactttattacttgtgaaacgatttgatacacttgtct 147629  T
Q  259 aa 260  Q
    ||    
T  147628 aa 147627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 16179063 - 16179010
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcact 253  Q
    ||||||| |||||||||||| || ||||||||||| ||||||||||||| ||||    
T  16179063 tggatacgatactctacttatcagtttattacttgttaaacgatttggtacact 16179010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 22664303 - 22664214
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    |||||| ||||||| |||  |||  ||||||| |||||   ||||||  |||||||||||| || |||||||||||||||||||||||||    
T  22664303 aataagcaacgcgagttgtttagacgaaatgaaaatcccagtggataagatactctacttatcactttattacttggtaaacgatttggt 22664214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 25958205 - 25958120
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgattt 245  Q
    ||||||||||   ||||| || |||| || |||||||||| ||||||  |||||||| ||||| || ||||||| |||||||||||    
T  25958205 aataagtaacataaattgtctggttggaacgacaatccatgtggatatgatactctatttacacttcattactttgtaaacgattt 25958120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 34481042 - 34480965
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||| ||  | |||||| |||| |||||||| || |||||||||||||||||||||| || || ||||||||    
T  34481042 tgaaatgacagtcattgtggatataatattctacttatcactttattacttggtaaacgattttgtacatttgtctaa 34480965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 24214610 - 24214558
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacga 242  Q
    ||||||||| |||||||| |||| |||||| || |||||||||||||||||||    
T  24214610 acaatccatgtggatacagtactgtacttatcactttattacttggtaaacga 24214558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 24281341 - 24281285
Alignment:
Q  193 aatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    ||||||| ||||||  ||| |||||||| || |||||||||||||||||||||||||    
T  24281341 aatccatgtggatatgataatctacttatcactttattacttggtaaacgatttggt 24281285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 32383065 - 32383101
Alignment:
Q  224 tttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  32383065 tttattacttggtaaacgatttggtacacttgcctaa 32383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 15544147 - 15544036
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||||| |||||||||||  || || ||||| |||| |||| |||||||||| ||| ||||||||||||||||||||||||| |||||| |||    
T  15544147 aataagtaacgcggattgcctagtttgaacgataatccctatgtatacgatactctactgacagtttattacttggtaaacgatttggtacacttgccta 15544048  T
Q  260 aatccgaccatc 271  Q
    ||||||||||||    
T  15544047 aatccgaccatc 15544036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 28253377 - 28253266
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||||||||| |||| ||| || || ||||| | || |||| ||| |||||||||| ||||||||||||||||||||||||| || |||  ||    
T  28253377 aataagtaacgcgaatttcctacttggaacgataatccctgtgaatacgatattctacttacactttattacttggtaaacgatttggtacatttgcata 28253278  T
Q  260 aatccgaccatc 271  Q
    ||||||||||||    
T  28253277 aatccgaccatc 28253266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 18208276 - 18208361
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| |||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||| |||||| || ||||||||||||    
T  18208276 gaaaggacaatccatgtggatacgatactctacttacactttattactttgtaaacgatttggtacacttgcct-aatccgaccatc 18208361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 23380259 - 23380367
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||| ||| | ||| || ||||||||||||||||||||| |||| ||| | |||||| || ||||||||||||||||| ||||||| |||||| ||    
T  23380259 aataagtagcgcaagttgtcttgttgaaatgacaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgcct 23380358  T
Q  259 aaatccgac 267  Q
    |||||||||    
T  23380359 aaatccgac 23380367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 32417358 - 32417469
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||   |||||||||| ||||| |  ||||||| | |||| ||||||||||||||| ||||||||||| ||||||||||||| |||||  |||    
T  32417358 aataagtaacagaaattgcctaggtgaaacgtaaatccatgtcgatataatactctacttacactttattacttgataaacgatttggtacacttaccta 32417457  T
Q  260 aatccgaccatc 271  Q
    ||| ||||||||    
T  32417458 aattcgaccatc 32417469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 24266983 - 24267057
Alignment:
Q  186 aaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||| ||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  24266983 aaatgataatccttgtggatacgatactctacttacactttattacttggtaaacgatttggtacacttgcctaa 24267057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 24343614 - 24343688
Alignment:
Q  186 aaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||| ||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  24343614 aaatgataatccttgtggatacgatactctacttacactttattacttggtaaacgatttggtacacttgcctaa 24343688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 26121367 - 26121436
Alignment:
Q  201 tggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||    
T  26121367 tggatactatactctacttacattttattacttgctaaacgatttggtacacttgcct-aatccgaccatc 26121436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 34487734 - 34487640
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcactt 254  Q
    ||||||||||||||||||  |||  |||| |||||||||| ||||||  ||| |||||||||| ||||||||||||||||| ||||||| |||||    
T  34487734 aataagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctacttacactttattacttggtaaacaatttggtacactt 34487640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 36175205 - 36175134
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgt 256  Q
    |||| |||||||| ||||||||| |||||||||  ||| ||||||||||||||||||||||||| |||||||    
T  36175205 gaaacgacaatccttatggatacgatactctacaaacactttattacttggtaaacgatttggtacacttgt 36175134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 23014612 - 23014671
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta 220  Q
    ||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||    
T  23014612 aataagtaacgtgaattgcctagttgaaacgacaatcctta-ggatacaatactctactta 23014671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 15375909 - 15375996
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| |||||||| | ||||||  |||||||||||| |||||||||| ||||||||||||||||| |||||| |  ||||||||||||    
T  15375909 gaaacgacaatccctgtggataggatactctacttatcattttattatttggtaaacgatttggtacacttgccataatccgaccatc 15375996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 17171555 - 17171650
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    ||||| ||||||||||||| |||  |||| |||||||||| ||||||| || ||||||||| || ||||||||||| |||| |||||||| |||||    
T  17171555 aataattaacgcgaattgcttagacgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatttggtacactt 17171650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 17185560 - 17185449
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||| |||||| ||||||  | ||||||| |||||||| | | ||||| |||||||||||| || ||||||| |||||||| ||||| || |||||||||    
T  17185560 aatacgtaacgtgaattgtttggttgaaacgacaatccctgtagatacgatactctacttatcactttattatttggtaaatgatttagtacacttgtct 17185461  T
Q  259 aaatccgaccat 270  Q
    ||||||| ||||    
T  17185460 aaatccggccat 17185449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 22755593 - 22755507
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacatttt-attacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| |||||||| ||||||||| ||||||||||||  | || |||||||||||||||||| ||| ||||||||| ||||||||||||    
T  22755593 gaaacgacaatccttatggatacgatactctacttatctcttcattacttggtaaacgattcggtacacttgtct-aatccgaccatc 22755507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 27921404 - 27921514
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||| |||||||||||||||||  |||| |||| |  |||| |||| ||||||||| |||||||||||  |||| |||| || |||||| |||    
T  27921404 aataagtaacgtgaattgcctagttgaaacaacaacccatgtatatacgatacactacttacactttattacttgacaaacaattt-gtacacttgccta 27921502  T
Q  260 aatccgaccatc 271  Q
    |||| |||||||    
T  27921503 aatctgaccatc 27921514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 19004254 - 19004324
Alignment:
Q  186 aaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||||| || ||||||    
T  19004254 aaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaacgatttagtacacttg 19004324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 19086212 - 19086282
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||| ||| |||||| ||||||||||||| || ||||||||||||||||||||||||| ||||| |||||    
T  19086212 acaattcatgtggatataatactctacttatcactttattacttggtaaacgatttggtacacttatctaa 19086282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 26110513 - 26110574
Alignment:
Q  209 atactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||||||||||||||||||||| ||||||||| ||| |||||| || ||||||||||||    
T  26110513 atactctacttacattttattacttgataaacgattcggtacacttgcct-aatccgaccatc 26110574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 25550531 - 25550607
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||||||||| | ||||||  |||||||||||| || ||||||||||||||||||||||| | |||||| ||||    
T  25550531 gaaatgacaatccctgtggatatgatactctacttatcactttattacttggtaaacgatttgatacacttgcctaa 25550607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 17769462 - 17769509
Alignment:
Q  224 tttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  17769462 tttattacttggtaaacgatttggtacacttgcataaatccgaccatc 17769509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 19283898 - 19283968
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||||||||||||||| || ||||||| |||||||||||||| |||||||| ||  ||||||||||||    
T  19283898 tggatacaatactctacttatcactttattatttggtaaacgatttagtgcactt-tcctaatccgaccatc 19283968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 24852174 - 24852260
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgattt 245  Q
    ||||||||||| ||||||  |||  ||||  ||||||||| ||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  24852174 aataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaatcgattt 24852260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 24140539 - 24140454
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatt 244  Q
    |||| |||||||||||||  | |  |||| ||||||||   |||||||||||||||||||| || |||||||||||||||||||||    
T  24140539 aatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaaacgatt 24140454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 15470008 - 15469932
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||| ||| ||||||| |||||| || || || ||||||||||||||||||||||||| |||||| ||||    
T  15470008 gaaacgacaattcatgtggatacgatactcgacctatcactttattacttggtaaacgatttggtacacttgcctaa 15469932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 17431956 - 17431869
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctacttac-attttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||| |||||||  | ||||||| ||||||||||| | | |||||||||||||||||||||| || |||||||| | |||||||||||    
T  17431956 tgaaacgacaatctctgtggatacgatactctactttccactttattacttggtaaacgatttagtacacttgtc-atatccgaccatc 17431869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 20534057 - 20534141
Alignment:
Q  162 taagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttg 246  Q
    |||||||| | |||||| |||||| || || ||||| || | |||| ||||| |||||||| |||||||||||||||| ||||||    
T  20534057 taagtaacactaattgcgtagttggaacgaaaatccctaggcatacgatactttacttacactttattacttggtaaaagatttg 20534141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 39434559 - 39434462
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtc 257  Q
    ||||||||||||||||||  | |   ||| |||||||||| ||||||| ||  |||||||| || ||||||||||||||||||| ||||| ||||||||    
T  39434559 aataagtaacgcgaattgtttggacaaaaggacaatccatgtggatacgattttctacttatcaatttattacttggtaaacga-ttggtacacttgtc 39434462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 20315432 - 20315517
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatt 244  Q
    ||||||| ||||||||||  | |  |||| || ||||||| ||||||| |||||||||||| ||  ||||||||||||||||||||    
T  20315432 aataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattacttggtaaacgatt 20315517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 23388865 - 23388937
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtc 257  Q
    |||| |||||||||| ||||||| |||||||||||| || ||||||||||||| ||| | ||||| ||||||||    
T  23388865 gaaaggacaatccatgtggatacgatactctacttatcactttattacttggttaac-aattggtacacttgtc 23388937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 23265251 - 23265191
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta 220  Q
    ||||||||||| ||||||  | |||||||||| ||||||||||||||| ||| | ||||||    
T  23265251 aataagtaacgtgaattgtttggttgaaatgaaaatccatatggatacgatattttactta 23265191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 25402364 - 25402440
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||| | |||||||||||||||||||| || ||  |||||||| |||| ||||||| |||||| ||||    
T  25402364 gaaacgacaatccctgtggatacaatactctacttatcacttccttacttggcaaacaatttggtacacttgcctaa 25402440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 7e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 8447052 - 8447163
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||||||| ||| ||||||| || |||||||||| ||||||| ||| |||||||| | ||||||||||||||||||||||||| |||||| |||    
T  8447052 aataagtaacgcgagttgtctagttggaacgacaatccatgtggatacgataatctacttatactttattacttggtaaacgatttggtacacttgccta 8447151  T
Q  260 aatccgaccatc 271  Q
    ||| ||||||||    
T  8447152 aattcgaccatc 8447163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 12557713 - 12557822
Alignment:
Q  162 taagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaa 261  Q
    |||||||| | ||||||||| |||||| | |||||| | ||||| | ||| |||||||||| |||||||||||||||| |||||||| |||||| |||||    
T  12557713 taagtaacacaaattgcctaattgaaacggcaatccttgtggattcgatattctacttacactttattacttggtaaaagatttggtacacttgcctaaa 12557812  T
Q  262 tccgaccatc 271  Q
    ||||||||||    
T  12557813 tccgaccatc 12557822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 25070224 - 25070119
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||| |||||| ||||||| || |||||||| | ||||| | |||||||||||||| ||||||| ||| ||||||||||| |  |||||||||    
T  25070224 aataagtaacgtgaattgtctagttggaacgacaatccttgtggatgcgatactctacttacactttattatttgataaacgatttgatatacttgtcta 25070125  T
Q  260 aatccg 265  Q
    ||||||    
T  25070124 aatccg 25070119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 8503076 - 8503184
Alignment:
Q  164 agtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaat 262  Q
    |||||||| |||||  | |||||||||||||||||| ||||||  || ||||||||| ||  |||||||||||||||||||||||| |||||| ||||||    
T  8503076 agtaacgcaaattgtttggttgaaatgacaatccatgtggatatgatcctctacttatcacgttattacttggtaaacgatttggtacacttgcctaaat 8503175  T
Q  263 ccgaccatc 271  Q
     ||||||||    
T  8503176 acgaccatc 8503184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 25939251 - 25939143
Alignment:
Q  163 aagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaat 262  Q
    |||||||| ||||||  | ||||||| || ||||| ||||||||| ||||| |||||||| ||||||||||| |||| ||| |||| |||| ||||||||    
T  25939251 aagtaacgtgaattgtttggttgaaacgaaaatccttatggatacgatactttacttacactttattacttgataaatgatgtggtacactagtctaaat 25939152  T
Q  263 ccgaccatc 271  Q
    |||||||||    
T  25939151 ccgaccatc 25939143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 17743478 - 17743574
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||||| |||||||  | |  |||| || ||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  17743478 aataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 17743574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 18553908 - 18554020
Alignment:
Q  159 gaataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||| ||||||| ||||||||||| | | ||||  |||||||| ||| | |||| |||||| ||| | |||| || |||||| ||    
T  18553908 gaataagtaacgtgaattgtctagttggaatgacaatccctgtagatatgatactctaattatactttactacttgataaccaattttgtacacttgcct 18554007  T
Q  259 aaatccgaccatc 271  Q
    |||||||||||||    
T  18554008 aaatccgaccatc 18554020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 25888226 - 25888323
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||     |||||| |||||||||| ||||||| ||||| |||||| || ||||||||||||||||| ||||||| |||||| ||    
T  25888226 aataagtaacgcgaattgt----ttgaaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacacttgcct 25888321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 32439999 - 32440110
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||| | ||||||||| |||||| || |||||   ||||||| ||||| || ||||| |||||| |||||||||| ||||||| ||||||  |     
T  32439999 aataagtaacacaaattgcctaattgaaacgataatcctcgtggatacgatactttatttacactttatttcttggtaaacaatttggtacacttgcatg 32440098  T
Q  260 aatccgaccatc 271  Q
    ||||||||||||    
T  32440099 aatccgaccatc 32440110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 18539980 - 18540082
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||  ||||||||||||||||| | |||||| |||  |||  |||||||||||||| || | |||||| ||||| |||| || ||||||||||    
T  18539980 aataagtaacttgaattgcctagttgaaacgtcaatccctataaatatgatactctacttacacttcactacttgataaacaattttgtacacttgtcta 18540079  T
Q  260 aat 262  Q
    |||    
T  18540080 aat 18540082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 12953296 - 12953397
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  | |  |||| |||||||||| |||| |||||||||||||||  | ||||||||||| |||| |||||||| |||||| ||    
T  12953296 aataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaatgatttggtacacttgcct 12953395  T
Q  259 aa 260  Q
    ||    
T  12953396 aa 12953397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 17349453 - 17349368
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgattt 245  Q
    ||||||||||||||| ||  | |  |||| |||||||  | ||||||| |||||||||||||| ||||||||||||||||||||||    
T  17349453 aataagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgatactctacttacactttattacttggtaaacgattt 17349368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 23011795 - 23011860
Alignment:
Q  190 gacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||| | ||||||||||| |||||||||| ||||||||||||||||  ||||||| ||||||    
T  23011795 gacaatccttgtggatacaataatctacttacactttattacttggtaaaaaatttggtacacttg 23011860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 29719233 - 29719334
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  |    |||| |||||||| | ||||||| ||| |||||||| || ||||||||||||||||||||||||| |||||| ||    
T  29719233 aataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcactttattacttggtaaacgatttggtacacttgcct 29719332  T
Q  259 aa 260  Q
    ||    
T  29719333 aa 29719334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 15454804 - 15454732
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattact 232  Q
    ||||||||||  |||||||||||||| ||||||||||   |||||||  |||||||||||||| |||||||||    
T  15454804 aataagtaacatgaattgcctagttggaatgacaatctcgatggatatgatactctacttacactttattact 15454732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 27909157 - 27909217
Alignment:
Q  196 ccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| ||||||| |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  27909157 ccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 27909217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 29883325 - 29883225
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggata-----caatactctacttacattttattacttggtaaacgatttggtgcactt 254  Q
    ||||||||||| |||||| |||||||||| |||||| | | ||||||     ||||| | |||||||||||||||||||||||||| |||| || |||||    
T  29883325 aataagtaacgtgaattgtctagttgaaacgacaattcttgtggatatgatacaatattttacttacattttattacttggtaaacaatttagtacactt 29883226  T
Q  255 g 255  Q
    |    
T  29883225 g 29883225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 25937018 - 25936907
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||| | ||||||||||||| ||  |  || ||| ||||||  || ||||||||||| ||||||||||  |||||||| |||| |||| |||||    
T  25937018 aataagtaacacaaattgcctagttggaacaatcatacatgtggatatgattctctacttacactttattacttaataaacgatgtggtacactagtcta 25936919  T
Q  260 aatccgaccatc 271  Q
    ||||| ||||||    
T  25936918 aatccaaccatc 25936907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 32085535 - 32085449
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| |||||||||| ||||||  |||||||||||| || ||||||||||||||||| ||||||| |||||  || ||||||||||||    
T  32085535 gaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttacct-aatccgaccatc 32085449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 18548071 - 18548169
Alignment:
Q  173 aattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||| ||||||| ||| ||||||||| | ||||  |||||||||||||| |||| || | | ||||| |||| | ||||||| |||||||||||||||    
T  18548071 aattgtctagttggaataacaatccatgtagatatgatactctacttacaatttactattcgataaacaattttgcgcacttgcctaaatccgaccatc 18548169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 20174662 - 20174732
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    |||| |||||||||| |||| |  |||||||||||| || ||||||||||||||||||||||||| |||||    
T  20174662 gaaacgacaatccatgtggaaatgatactctacttatcactttattacttggtaaacgatttggtacactt 20174732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 15339310 - 15339234
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||||| ||||||  |||||||||||  || |||||||||||||||| |||||||| |||||| ||||    
T  15339310 gaaacgacaatccatgtggatatgatactctacttttcactttattacttggtaaatgatttggtacacttgcctaa 15339234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 45621883 - 45621994
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||| |||||||  | |  |||| |||||||| | | ||||| |||||||||||  || |||||||||||||||||||||| || ||||| |||    
T  45621883 aataagtaacacgaattgtttggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaaacgattttgtacactt-tct 45621981  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  45621982 taatccgaccatc 45621994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 25618653 - 25618574
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaa 238  Q
    ||||||| ||||||||||  |||  |||| |||||||||| ||||||  |||||||||||| || |||||||||||||||    
T  25618653 aataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaa 25618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 30411750 - 30411664
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||||||| | | ||||| |||||||||||| || |||||||| ||||||| ||||| || |||||||| | |||||||||||    
T  30411750 gaaatgacaatccctgttgatacgatactctacttatcactttattacatggtaaaagatttcgtacacttgtc-atatccgaccatc 30411664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 17890008 - 17889923
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| |||||||| |||| |||  |||| ||||||||| | ||||| || |||||||||||||| ||||||| | ||||||||||||    
T  17890008 gaaacgacaatccctatgaatatgataccctacttacactgtattatttagtaaacgatttggtacacttgtat-aatccgaccatc 17889923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 27418463 - 27418389
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattactt 233  Q
    |||||||||| |||||||  | |||||||||| ||||||| ||||||  |||||||||||| || ||||||||||    
T  27418463 aataagtaacacgaattgtttggttgaaatgataatccatgtggatatgatactctacttatcactttattactt 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 31804943 - 31804997
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    |||||||||||||||||||| || ||||||| ||||||||| ||||||| |||||    
T  31804943 tggatacaatactctacttatcactttattatttggtaaacaatttggtacactt 31804997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 13708183 - 13708219
Alignment:
Q  201 tggatacaatactctacttacattttattacttggta 237  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  13708183 tggatacgatactctacttacattttattatttggta 13708219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 26603377 - 26603453
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| ||||||||||||  |||| |||||||||||| || ||| ||||||| ||||| ||||||| |||||| ||||    
T  26603377 gaaaagacaatccatataaatacgatactctacttatcacttttttacttgataaacaatttggtacacttgcctaa 26603453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 27869852 - 27869784
Alignment:
Q  203 gatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||| |||||||||| |||  |||||||||  ||||| ||||||| ||||||||||||| ||| ||||    
T  27869852 gatacgatactctactaacacattattacttaataaacaatttggtacacttgtctaaattcgatcatc 27869784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 31288432 - 31288343
Alignment:
Q  182 gttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||| |||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||    
T  31288432 gttgaaaagacaatccctatggatacgatactttacttacactttattacttggtaaacgatttggtacactttcctaaatccgaccatc 31288343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 26008120 - 26008008
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||||||||  ||||||| ||||||||||| | | ||||| |||||||||||| || |||||||||||||||| |||||||| |||||| ||    
T  26008120 aataagtaacgcgaattttctagttggaatgacaatccctcttgataccatactctacttatcactttattacttggtaaatgatttggtacacttgcct 26008021  T
Q  259 aaatccgaccatc 271  Q
    |||| ||||||||    
T  26008020 aaattcgaccatc 26008008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 24119791 - 24119882
Alignment:
Q  180 tagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||| || || ||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||| ||||||||    
T  24119791 tagttggaacgaaaatccatgtggatacaatactctacttacactttataacttggtaaacgatttggcacacttgtctaaattcgaccatc 24119882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 29382363 - 29382464
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||  | | ||||| |||||||| | ||||||| |||||||||||| || ||||||||||||||||||||||||| |||||| ||    
T  29382363 aataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcct 29382462  T
Q  259 aa 260  Q
    ||    
T  29382463 aa 29382464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 5851038 - 5850927
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||| || ||||  | ||||||| ||||||| || ||||||| |||||||||||| || ||||||||||||||||||||| ||| |||||| ||    
T  5851038 aataagtaacacggattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacacttgact 5850939  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  5850938 -aatccgaccatc 5850927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 17972264 - 17972193
Alignment:
Q  163 aagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttg 234  Q
    |||||||| |||||||||||||  |||||||||||||  |||||| |||||||||||||| |||||||||||    
T  17972264 aagtaacgtgaattgcctagttagaatgacaatccatgcggatacgatactctacttacactttattacttg 17972193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 44011051 - 44011114
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggt 248  Q
    |||| |||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  44011051 gaaacgacaatccatgtggatacgatactctacttacactttattacttcgtaaacgatttggt 44011114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 26615246 - 26615339
Alignment:
Q  162 taagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||||| ||||||| || |||||| |||||| |||||||||||||||||||||||| || ||||||| ||||| ||||||||| | ||||||    
T  26615246 taagtaacgtgaattgcttaattgaaacgacaattcatatggatacaatactctacttatcactttattagttggt-aacgatttgatacacttg 26615339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 17101919 - 17102006
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||| |||||||| ||||||||| |||||||||||| || ||||||||||||||||||||||| | ||||| || | |||||||||||    
T  17101919 tgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttgatacactt-tccatatccgaccatc 17102006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 15292827 - 15292748
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaa 239  Q
    ||||||||||| |||||||||| ||| || |||||||||| || || | | |||||||||||| ||||||||||||||||    
T  15292827 aataagtaacgtgaattgcctaattggaacgacaatccatgtgaatccgaaactctacttacactttattacttggtaaa 15292748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 15473196 - 15473117
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaa 239  Q
    ||||||||||| |||||||||| ||| || |||||||||| || || | | |||||||||||| ||||||||||||||||    
T  15473196 aataagtaacgtgaattgcctaattggaacgacaatccatgtgaatccgaaactctacttacactttattacttggtaaa 15473117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 24269669 - 24269594
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||| | ||||||| |||||||||||||| ||||||||||||||||  ||||||| |||||| ||||    
T  24269669 gaaacgacaatccctgtggatacgatactctacttacactttattacttggtaaataatttggtacacttgcctaa 24269594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 28317506 - 28317431
Alignment:
Q  164 agtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaa 239  Q
    ||||||| |||||||||||||||||  ||||| ||| | ||||  |||||||||||||| ||||||||||||||||    
T  28317506 agtaacgtgaattgcctagttgaaacaacaatacatgttgatatgatactctacttacactttattacttggtaaa 28317431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 24644901 - 24644855
Alignment:
Q  193 aatccatatggatacaatactctacttacattttattacttggtaaa 239  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  24644901 aatccatgtggatacaatactctacttacactttattacttggtaaa 24644855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 30122183 - 30122257
Alignment:
Q  186 aaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||||||| ||||||  |||||||||||||| |||||||||||| ||  |||||||| |||||| ||||    
T  30122183 aaatgacaatccatgtggatatgatactctacttacactttattacttggaaagtgatttggtacacttgcctaa 30122257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 15238896 - 15238795
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  |||  |||| |||||| ||| ||||||| ||| |||||||| |||||| ||||||||||||| ||||| | |||||| ||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatttgatacacttgcct 15238797  T
Q  259 aa 260  Q
    ||    
T  15238796 aa 15238795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 14075691 - 14075579
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||  ||||  | ||||||| |||||||||| ||||||| ||| |||||||| || ||| |||||||||||| |||||||| || ||  ||    
T  14075691 aataagtaacgcacattgtttggttgaaacgacaatccatgtggatacgatagtctacttatcactttcttacttggtaaaagatttggtacaatttcct 14075592  T
Q  259 aaatccgaccatc 271  Q
    |||||| ||||||    
T  14075591 aaatccaaccatc 14075579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 24114309 - 24114385
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||| |  |||||| |||||||||||| |||||||||||||||||||| ||||||| |||||| ||||    
T  24114309 gaaacgacaatccctgcggatacgatactctacttatcattttattacttggtaaacaatttggtacacttgcctaa 24114385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 12268249 - 12268182
Alignment:
Q  204 atacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| |||||||  ||||| ||||||||||| ||||  |||||||||||||| |||||||||||||||    
T  12268249 atacgatactctgtttacactttattacttgataaattatttggtgcacttgcctaaatccgaccatc 12268182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 25182455 - 25182541
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactt-acattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||||||||| || |||| |||||||||||  || ||||||| ||||||||  ||||||| ||||||||| ||||||||||||    
T  25182455 gaaatgacaatccatgtgaatacgatactctacttgtcactttattatttggtaaataatttggtccacttgtct-aatccgaccatc 25182541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 30783773 - 30783832
Alignment:
Q  190 gacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    ||||||| || ||||||| |||||||||||| || |||||||||||||||||||||||||    
T  30783773 gacaatctatgtggatacgatactctacttatcactttattacttggtaaacgatttggt 30783832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 17969512 - 17969399
Alignment:
Q  159 gaataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtc 257  Q
    ||||||||||| || ||||| |||||| ||||||||||  ||| ||||| ||||| || ||| || ||||||||||| |||| |||| ||  |||||| |    
T  17969512 gaataagtaacacggattgcttagttggaatgacaatcactatagatacgatactatatttatcactttattacttgataaatgattcggcacacttgcc 17969413  T
Q  258 taaatccgaccatc 271  Q
     |||||||||||||    
T  17969412 aaaatccgaccatc 17969399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 5052964 - 5053024
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||||||||||||| || ||||||||  ||||||||||||||| |||||| ||||    
T  5052964 tggatacaatactctacttagcactttattacccggtaaacgatttggtacacttgcctaa 5053024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 14006192 - 14006112
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaa 239  Q
    ||||||||| || ||||||||||||| ||  ||||| ||| || |||  |||||||||||| |||||||||||||||||||    
T  14006192 aataagtaatgcaaattgcctagttggaacaacaattcatgtgaatatgatactctacttatcattttattacttggtaaa 14006112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 14528221 - 14528145
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| ||||||| || ||||||| ||||||||| || || ||||||||||||||||||||||||  |||||| ||||    
T  14528221 gaaacgacaatctatgtggatacgatactctacgtatcactttattacttggtaaacgatttggcacacttgcctaa 14528145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 2637695 - 2637608
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttg 246  Q
    ||||||||||| || |||  |||  |||| |||||||||| ||||||| |||||||||||| || ||||||||||| ||||| |||||    
T  2637695 aataagtaacgggagttgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaacaatttg 2637608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 19786763 - 19786717
Alignment:
Q  224 tttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||    
T  19786763 tttattacttggtaaacgatttggtatacttgtct-aatccgaccatc 19786717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 24110698 - 24110753
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||| |||||||||||| ||||||||||||||||||| |||||| | ||||||    
T  24110698 tggatacgatactctacttatcattttattacttggtaaatgatttgatacacttg 24110753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 34497173 - 34497125
Alignment:
Q  199 tatggatacaatactctactta-cattttattacttggtaaacgatttg 246  Q
    ||||||||| |||||||||| | || |||||||||||||||||||||||    
T  34497173 tatggatacgatactctactaatcactttattacttggtaaacgatttg 34497125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 9386051 - 9385941
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||| | ||||||||||||||||| |||||||||| |||||||   ||||||||| || ||||||||||||||| | ||||||| |||||||| |    
T  9386051 aataagtaatgtgaattgcctagttgaaacgacaatccatgtggatacgcgactctacttgcactttattacttggtaaccaatttggtacacttgtcaa 9385952  T
Q  260 aatccgaccat 270  Q
    | |||||||||    
T  9385951 agtccgaccat 9385941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 34478618 - 34478533
Alignment:
Q  163 aagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggt 248  Q
    |||||||  ||||||||||||||||||| |||||| | ||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  34478618 aagtaacatgaattgcctagttgaaatgtcaatccttgtggatacgatactctacttacactttattatttggtaaacgatttggt 34478533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 15466466 - 15466366
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||| ||||||||||||  |||  ||||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||||||||||||| |||||| |||    
T  15466466 aataactaacgcgaattgtttagacgaaatgacaatccctattgatacgatactctacgtacactttattacttggtaaacgatttggtacacttgccta 15466367  T
Q  260 a 260  Q
    |    
T  15466366 a 15466366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 26215389 - 26215495
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||| |||||||||| |||||| ||||||| |||||||||| |||||||||||||| ||||||| |||| ||| |||||||| |  ||| |||    
T  26215389 aataagtaacgtgaattgcctaattgaaacgacaatctatatggatacgatactctacttacactttattatttgg-aaatgatttggtactattgccta 26215487  T
Q  260 aatccgac 267  Q
    ||||||||    
T  26215488 aatccgac 26215495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 20722192 - 20722289
Alignment:
Q  173 aattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||||||| || |||||||| | ||||||  |||||||||||| | ||||||||||||||||||||||||| || ||| |||||||||||||||    
T  20722192 aattgcctagttggaaagacaatccttgtggatattatactctactta-actttattacttggtaaacgatttggtacatttgcctaaatccgaccatc 20722289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 9726119 - 9726008
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||  | |  |||| |||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||| |||||| ||    
T  9726119 aataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcct 9726020  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  9726019 -aatccgaccatc 9726008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 28586032 - 28586144
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||| | ||||  | ||||||| |||||||||| | ||||  |||||||||||| || ||||||||| |||||||||||||||  ||||||||    
T  28586032 aataagtaacgtggattgttttgttgaaacgacaatccatgtcgatatgatactctacttatcaatttattactcggtaaacgatttggtatacttgtct 28586131  T
Q  259 aaatccgaccatc 271  Q
    |||||||||||||    
T  28586132 aaatccgaccatc 28586144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 21672470 - 21672538
Alignment:
Q  193 aatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| ||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  21672470 aatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtgcacttgcctaa 21672538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 31629127 - 31629227
Alignment:
Q  172 gaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccat 270  Q
    |||||||||||||| || |||||||||| || ||||| || ||||| || |||||||||||||||||||||||||  | || |||||||||| |||||||    
T  31629127 gaattgcctagttggaacgacaatccatgtgaatacattattctacctatcattttattacttggtaaacgatttcatacaattgtctaaattcgaccat 31629226  T
Q  271 c 271  Q
    |    
T  31629227 c 31629227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 12183358 - 12183429
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||||||||||| ||||||| ||||| |||||| || ||||||||||||||||||||||||| ||||||    
T  12183358 gaaatgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacgatttggtacacttg 12183429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 9516882 - 9516784
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtc 257  Q
    |||||||||||||| |||  | |  |||| |||||||||| ||||||| |||||||||||| || ||||||||| ||||||||||||||| ||||||||    
T  9516882 aataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaacgatttggtacacttgtc 9516784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 21679886 - 21679954
Alignment:
Q  193 aatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| ||||||| |||||||||||| || |||||||||| ||||||||||||||||||||| ||||    
T  21679886 aatccatgtggatacgatactctacttatcactttattacttagtaaacgatttggtgcacttgcctaa 21679954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 23645794 - 23645858
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    |||| |||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  23645794 gaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttggt 23645858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 23844467 - 23844578
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||||| |||  | |  |||| |||||||| | | ||||  |||||||||||| |||||||||||||||||||||||||||| ||||| ||     
T  23844467 aataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattacttggtaaacgatttggtacacttatc- 23844565  T
Q  259 aaatccgaccatc 271  Q
    | |||||||||||    
T  23844566 atatccgaccatc 23844578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 21688797 - 21688892
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    |||||||||||||||||   | | || || |||||||| |||||||||||||||||||||| || || ||||||| |||||||||| ||| |||||    
T  21688797 aataagtaacgcgaattttttggatgtaacgacaatccctatggatacaatactctacttatcacttgattacttagtaaacgattgggtacactt 21688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 21907504 - 21907418
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| |||||||| | ||||||| ||||| |||||| || |||||||||||||||||||||||||  ||||| || ||||||||||||    
T  21907504 gaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaacgatttggtatacttgcct-aatccgaccatc 21907418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 25927338 - 25927416
Alignment:
Q  193 aatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||| ||||||| ||| |||||||| || |||||||||||||||||| |||||| |||||| || ||||||||||||    
T  25927338 aatccatgtggatacgatattctacttatcactttattacttggtaaacgttttggtacacttgcct-aatccgaccatc 25927416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 8039178 - 8039243
Alignment:
Q  204 atacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccat 270  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||  |||||| || |||||||||||    
T  8039178 atacgatactccacttacactttattacttggtaaacgatttggcacacttgcct-aatccgaccat 8039243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 9899001 - 9899062
Alignment:
Q  201 tggatacaatactctactt--acattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||||||||||||  | | ||||||||||||||||| ||||||| |||||||||||    
T  9899001 tggatacaatactctacttttagactttattacttggtaaacaatttggtacacttgtctaa 9899062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 17729208 - 17729154
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||| |||||    
T  17729208 tggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 17729154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 20005914 - 20005979
Alignment:
Q  193 aatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtc 257  Q
    ||||||| | ||||| ||||||| |||| || ||||||||||||||||||||||||| ||||||||    
T  20005914 aatccatgtagatacgatactctgcttatcactttattacttggtaaacgatttggtacacttgtc 20005979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 22410353 - 22410410
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaac 240  Q
    ||||| |||||||| | ||||||| |||||||||||| ||||||||||||||||||||    
T  22410353 tgaaacgacaatccctgtggatacgatactctacttatcattttattacttggtaaac 22410410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 22567906 - 22567826
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||| ||||||||||||| |||||  ||  |||||||||||||||| ||||||| |||||| || ||||||||||||    
T  22567906 acaatccatgtggatacaatactatacttttcacgttattacttggtaaacaatttggtacacttgcct-aatccgaccatc 22567826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 4339791 - 4339731
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||||||||||||| || ||||||| ||| ||||| ||||||| |||||||||||    
T  4339791 tggatacaatactctacttatcactttattatttgataaacaatttggtacacttgtctaa 4339731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 9838427 - 9838380
Alignment:
Q  186 aaatgacaatccatatggatacaatactctactta-cattttattact 232  Q
    |||||||||||||| |||||||||||||||||||| || |||||||||    
T  9838427 aaatgacaatccatgtggatacaatactctacttatcactttattact 9838380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 11177022 - 11176936
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||| ||||| |||| ||||||| |||||||||||| || |||| |||| ||||||||||| ||| |||||| || ||||||||||||    
T  11177022 gaaacgacaacccatgtggatacgatactctacttatcactttagtactcggtaaacgattgggtacacttgcct-aatccgaccatc 11176936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 15614218 - 15614297
Alignment:
Q  192 caatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||| ||||||  ||| |||||||| | ||||||||| | |||||||||| || || || ||||||||||||||||    
T  15614218 caatccatgtggatattataatctacttatactttattactggataaacgatttagtacatttttctaaatccgaccatc 15614297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 33655903 - 33656013
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||| | || ||| |||||| ||| |||||| ||| ||||||||||| | ||| || | ||||||||||||||||| ||||||| || | | |||    
T  33655903 aataagtaatgtgagttgtctagtttaaacgacaattcatgtggatacaatattttacgtatactttattacttggtaaac-atttggtacagtcgccta 33656001  T
Q  260 aatccgaccatc 271  Q
    ||||| ||||||    
T  33656002 aatccaaccatc 33656013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 9386140 - 9386070
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttatta 230  Q
    ||||||||||  ||||| ||||||||||  || |||| || ||||||| |||||||||||||| |||||||    
T  9386140 aataagtaacttgaatttcctagttgaatcgataatctatgtggatacgatactctacttacactttatta 9386070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 7542961 - 7543073
Alignment:
Q  159 gaataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtc 257  Q
    |||||||||||||||||||  | | |||||  ||| |||| || ||||| ||||| |||||| || ||||||||||||||||| ||||| | || ||| |    
T  7542961 gaataagtaacgcgaattgtttggatgaaactacagtccacattgatacgatactttacttatcactttattacttggtaaacaatttgatacatttgcc 7543060  T
Q  258 taaatccgaccatc 271  Q
    | ||||||||||||    
T  7543061 t-aatccgaccatc 7543073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 17299863 - 17299920
Alignment:
Q  190 gacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttg 246  Q
    ||||||||  ||| |||| |||||||||||| || |||||||||||||||||||||||    
T  17299863 gacaatcccgatgaatacgatactctacttatcactttattacttggtaaacgatttg 17299920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 20426551 - 20426608
Alignment:
Q  214 ctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||||||||| |||||||| ||| ||||||| ||||||  ||||| ||||||||    
T  20426551 ctacttacattttactacttggttaacaatttggtacacttgcttaaattcgaccatc 20426608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 22566164 - 22566253
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    ||||||||||||||||||| |||  |||  |||||| | | ||||||  |||||||||||| || ||||||||||||||||  |||||||    
T  22566164 aataagtaacgcgaattgcttagacgaagcgacaattcttgtggatatgatactctacttatcactttattacttggtaaataatttggt 22566253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 27737691 - 27737792
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  | |  ||||  ||||||| | ||| ||  |||||||||||| || |||||||||||||||||||||| || |||||| ||    
T  27737691 aataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactctacttatcactttattacttggtaaacgatttagtacacttgcct 27737790  T
Q  259 aa 260  Q
    ||    
T  27737791 aa 27737792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 28589454 - 28589543
Alignment:
Q  182 gttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccat 270  Q
    ||||||| || ||||||| ||| ||| ||||| |||||| || ||| ||| ||| ||||||||||||| |||||| |||||| |||||||    
T  28589454 gttgaaacgaaaatccatgtggctacgatactttacttatcactttgttatttgataaacgatttggtacacttgcctaaattcgaccat 28589543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 5624688 - 5624648
Alignment:
Q  209 atactctactta-cattttattacttggtaaacgatttggt 248  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  5624688 atactctacttatcactttattacttggtaaacgatttggt 5624648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 8241333 - 8241273
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| |||||||||||| || ||| |||||| |||||||||||||| |||||| ||||    
T  8241333 tggatacgatactctacttatcactttcttacttcgtaaacgatttggtacacttgcctaa 8241273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 14079495 - 14079547
Alignment:
Q  209 atactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||||| || ||||| ||||||||||||||||||| |||||| ||||    
T  14079495 atactctacttatcactttataacttggtaaacgatttggtacacttgcctaa 14079547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 17827094 - 17827190
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||||||||||||||  | |  |||| |||||||||| ||||||| |||||||| |||  | ||||||||||  ||||||| ||||| ||||||    
T  17827094 aataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttataactttattacttattaaacgagttggtacacttg 17827190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 21932103 - 21932155
Alignment:
Q  209 atactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||||| || ||||||||||||||||| ||||||| |||||| ||||    
T  21932103 atactctacttatcactttattacttggtaaacaatttggtacacttgcctaa 21932155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 23143794 - 23143718
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||| | ||||||  |||||||||||| || ||||||| |||||||| |||||||| |||||| ||||    
T  23143794 gaaacgacaatccctgtggatatgatactctacttatcactttattaattggtaaatgatttggtacacttgcctaa 23143718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 10107077 - 10106996
Alignment:
Q  190 gacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||| |||||||| |||||||||||| || ||||||||||||||||||||||| | |||||| |||||||||||||||    
T  10107077 gacaatccctatggatagaatactctacttgcaatttattacttggtaaacgatttgctacacttgcctaaatccgaccatc 10106996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 13128876 - 13128977
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||||| |||  | |  |||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||    
T  13128876 aataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttggtaaacgatttggtacacttgcct 13128975  T
Q  259 aa 260  Q
    ||    
T  13128976 aa 13128977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 15050085 - 15050196
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||||| ||||| ||||||| ||||||||||||| ||   ||  || |||||||||| |||||||||||||||| |||||| | |||||| |||    
T  15050085 aataagtaacgcaaattgtctagttggaatgacaatccatgtgttcacggtattctacttacactttattacttggtaaatgatttgatacacttgccta 15050184  T
Q  260 aatccgaccatc 271  Q
    ||||||||||||    
T  15050185 aatccgaccatc 15050196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 15104339 - 15104228
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||||| ||||| ||||||| ||||||||||||| ||   ||  || |||||||||| |||||||||||||||| |||||| | |||||| |||    
T  15104339 aataagtaacgcaaattgtctagttggaatgacaatccatgtgttcacggtattctacttacactttattacttggtaaatgatttgatacacttgccta 15104240  T
Q  260 aatccgaccatc 271  Q
    ||||||||||||    
T  15104239 aatccgaccatc 15104228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 17672099 - 17671998
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||||| |||  |||  ||||  ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| |||||| ||    
T  17672099 aataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattacttggtaaacgatttggtacacttgcct 17672000  T
Q  259 aa 260  Q
    ||    
T  17671999 aa 17671998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 9052770 - 9052660
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||||| ||||||  | |||||||  ||||||  |  |||||| ||||||||||||||||||||||||||||||| |||||||| |||||| ||     
T  9052770 aataagtaacgtgaattgtttggttgaaacaacaatctttgcggatacgatactctacttacattttattacttggtaaatgatttggtacacttgcct- 9052672  T
Q  260 aatccgaccatc 271  Q
    ||||||||||||    
T  9052671 aatccgaccatc 9052660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 263
Target Start/End: Complemental strand, 19900676 - 19900573
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||| | |||||||||||||| || |||||||  | || |||  |||||||||||||| ||||||||||||||||| ||||||| |||||| |||    
T  19900676 aataagtaatgtgaattgcctagttggaacgacaatctttgtgaatatgatactctacttacactttattacttggtaaacaatttggtacacttgccta 19900577  T
Q  260 aatc 263  Q
    ||||    
T  19900576 aatc 19900573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 13692671 - 13692772
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||| |||||||  | || |||| |||||||||| ||||||  |||||||||||| || ||||||||||||||||||||||||| |||||| ||    
T  13692671 aataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacgatttggtacacttgcct 13692770  T
Q  259 aa 260  Q
    ||    
T  13692771 aa 13692772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 17709823 - 17709758
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  17709823 acaatccctatggatacaatactctacttatcactttattacttggtaaacgatttggtacacttg 17709758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 19374856 - 19374915
Alignment:
Q  201 tggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  19374856 tggatacgatactctacttacattttattacttgataaacgatttggtacacttatctaa 19374915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 1833599 - 1833702
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||| ||||||||   |||||||| |||||||||| ||||||||    |||||||| || ||||||||||||||||||||||| || ||||| ||    
T  1833599 aataagtaatgcgaattgttcagttgaaacgacaatccatgtggataca----tctacttatcactttattacttggtaaacgatttgatgtacttgcct 1833694  T
Q  259 aaatccga 266  Q
    ||||||||    
T  1833695 aaatccga 1833702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 22175990 - 22176060
Alignment:
Q  186 aaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||||||  |||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||    
T  22175990 aaatgacaatctctatggatacaatactctacttatcactttattacttgataaacgatttggtacacttg 22176060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 25643559 - 25643465
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcactt 254  Q
    |||||||||||  ||||||||| |||||||||||| || | ||||||| |||||||| ||||| |||||||||||  ||||||||| || |||||    
T  25643559 aataagtaacgtaaattgcctaattgaaatgacaacccctgtggatacgatactctagttacactttattacttgacaaacgatttagtacactt 25643465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 13908951 - 13908855
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||||| |||||||  | |  |||| |||||||| | ||||||| |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  13908951 aataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttg 13908855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 255
Target Start/End: Original strand, 19492702 - 19492798
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||||||||||||||  | | ||||| |||||| | | ||||||| |||||||||||| |  ||||||||||||||||||||||||| ||||||    
T  19492702 aataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttattacttggtaaacgatttggtacacttg 19492798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 25121228 - 25121315
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttgg 247  Q
    ||||||||||||||||||  | |  ||||  ||||||| | ||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  25121228 aataagtaacgcgaattgtttggacgaaaccacaatccttgtggatacgatactatacttacactttattacttggtaaacgatttgg 25121315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 11093999 - 11093949
Alignment:
Q  221 cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  11093999 cattttattacttggtaaacgatttgatacacttatctaaatccgaccatc 11093949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 22345087 - 22345009
Alignment:
Q  190 gacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgacc 268  Q
    |||||||||| ||||||| ||||||||| |||  ||||||||||| |||| |||| |||||| ||| ||||||||||||    
T  22345087 gacaatccatgtggatacgatactctacatactctttattacttgataaatgattaggtgcatttgcctaaatccgacc 22345009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 20317810 - 20317891
Alignment:
Q  190 gacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||| ||| || |||| ||||||||||||||||||||||| |||||||| |||| ||  |||||  ||||||||||||||    
T  20317810 gacaattcatgtgaatacgatactctacttacattttattacatggtaaacaatttagtatacttgcttaaatccgaccatc 20317891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 11700612 - 11700672
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| |||||||| ||| |||||||||||||||||||| ||||||| |||||||||||    
T  11700612 tggatacgatactctatttatcattttattacttggtaaacaatttggtacacttgtctaa 11700672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 14648951 - 14648891
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  14648951 tggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaa 14648891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 15164864 - 15164753
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttac-attttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||  | |  ||||||||||||| | ||||||| ||||||| ||||  | || |||||||||||||||||||||| ||||||||     
T  15164864 aataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatactctgcttattaattgattacttggtaaacgatttggtacacttgtc- 15164766  T
Q  259 aaatccgaccatc 271  Q
    | |||||||||||    
T  15164765 atatccgaccatc 15164753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 17951338 - 17951409
Alignment:
Q  200 atggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||| ||||| |||||| || |||| |||||||||||||||||||| ||||||||| ||||||||||||    
T  17951338 atggatacgatactttacttatcactttagtacttggtaaacgatttggtacacttgtct-aatccgaccatc 17951409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 17955190 - 17955261
Alignment:
Q  200 atggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||| ||||| |||||| || |||| |||||||||||||||||||| ||||||||| ||||||||||||    
T  17955190 atggatacgatactttacttatcactttagtacttggtaaacgatttggtacacttgtct-aatccgaccatc 17955261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 19882737 - 19882626
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  | |  |||| |||||||||| | ||||| |||||||||| | || ||||||||||| |||||||||| || |||||| ||    
T  19882737 aataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaacgattttgtacacttgcct 19882638  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  19882637 -aatccgaccatc 19882626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 5679259 - 5679201
Alignment:
Q  203 gatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||| |||||||||| | || ||||||||||||||||||||||||| |||||||||||    
T  5679259 gatacgatactctactaatcactttattacttggtaaacgatttggtacacttgtctaa 5679201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 13992911 - 13992973
Alignment:
Q  193 aatccatatggatacaatactctacttac-attttattacttggtaaacgatttggtgcactt 254  Q
    ||||||| ||||||| ||||||||||||| | ||||||||||||||||| ||||||| |||||    
T  13992911 aatccatgtggatacgatactctacttaccactttattacttggtaaacaatttggtacactt 13992973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 7582363 - 7582283
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||| ||||||  |||||||||||| || |||||||||||||||| |||||||| ||||| || | |||||||||||    
T  7582363 acaatccatgtggatatgatactctacttatcactttattacttggtaaatgatttggtacactt-tccatatccgaccatc 7582283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 11490629 - 11490517
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  | |  ||||  ||||||| | ||||||| |||||||||||| || ||||||||||| ||||| ||||||| ||||| ||     
T  11490629 aataagtaacgcgaattgtttggaagaaactacaatccctgtggatacgatactctacttatcactttattacttgataaacaatttggtacactt-tcc 11490531  T
Q  259 aaatccgaccatcg 272  Q
     |||||||||||||    
T  11490530 taatccgaccatcg 11490517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 26115936 - 26116001
Alignment:
Q  190 gacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||| ||||||||| ||||| || |||||  |||||||||| ||||||||||||| ||||||    
T  26115936 gacaatccttatggatacgatactttaattacacgttattacttgataaacgatttggtacacttg 26116001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 12839805 - 12839877
Alignment:
Q  183 ttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    ||||||||||||||| | ||||||| ||||||||| || |||||||||| ||||||| |||||| || |||||    
T  12839805 ttgaaatgacaatccttgtggatacgatactctacctatcattttattaattggtaagcgattttgtacactt 12839877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 17216889 - 17216825
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    |||| |||||||||| ||||||  |||||||||||| || |||||| ||||||||||||||||||    
T  17216889 gaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaacgatttggt 17216825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 20315097 - 20315001
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||||||||| |||||  | |  |||| |||||||| | ||||||  ||| |||||||| || ||||||||||||||||||||||||| ||||||    
T  20315097 aataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatttggtacacttg 20315001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 21323877 - 21323988
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  | |  |||| ||||||| || ||||||| |||||||||| | ||  |||||| |||||||||||||| || |||||| ||    
T  21323877 aataagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatttagtacacttgcct 21323976  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  21323977 -aatccgaccatc 21323988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 9737576 - 9737622
Alignment:
Q  224 tttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||    
T  9737576 tttattacttggtaaacgatttggtacacttgcct-aatccgaccatc 9737622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 19636612 - 19636682
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    ||||| |||||||| ||| |||||||||||||||||| || |||||||||| || ||||||||||| |||||    
T  19636612 tgaaacgacaatccctatagatacaatactctacttaccactttattactttgt-aacgatttggtacactt 19636682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 19929702 - 19929773
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||| |||||||||| ||||||| |||||||| ||| || ||| |||||||||||| |||||||| ||||||    
T  19929702 gaaacgacaatccatgtggatacgatactctatttatcactttgttacttggtaaatgatttggtacacttg 19929773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 22526439 - 22526372
Alignment:
Q  182 gttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    ||||||| |||||| ||| ||||||| |||||||||||| || ||||||| ||| |||||||||||||    
T  22526439 gttgaaacgacaattcatgtggatacgatactctacttatcactttattatttgataaacgatttggt 22526372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 40215320 - 40215431
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    ||||||||| | |||||||||||||| ||   | |||  | ||||||| ||| |||||||| | ||||||| ||||||||| || |||| ||||| |||     
T  40215320 aataagtaatgtgaattgcctagttggaacatctatctttgtggatacgataatctacttaaactttattatttggtaaacaatctggtacacttatctg 40215419  T
Q  260 aatccgaccatc 271  Q
    ||||||||||||    
T  40215420 aatccgaccatc 40215431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 11521218 - 11521288
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    |||| |||||||||| || |||| |||||||||||| || ||||||| ||| ||||||||||||| |||||    
T  11521218 gaaacgacaatccatgtgtatacgatactctacttatcactttattatttgataaacgatttggtacactt 11521288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 20829772 - 20829841
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| | |||||||||||||| | ||| || ||||||||||||||||||||||||| |||||| ||||    
T  20829772 acaatccttgtggatacaatactc-agttatcactttattacttggtaaacgatttggtacacttgcctaa 20829841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 22218642 - 22218688
Alignment:
Q  199 tatggatacaatactctacttacattttattacttggtaaacgattt 245  Q
    ||||||||| |||||||||||||| ||||||||||| ||||| ||||    
T  22218642 tatggatacgatactctacttacactttattacttgataaacaattt 22218688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 23080438 - 23080337
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||  | ||||||| |||||||||| || |||||||| |||||||| ||  |||||| ||||||||  |||| || ||||| |||    
T  23080438 aataagtaacgcaaattgtttggttgaaacgacaatccatgtgaatacaatattctacttatcaccttattatttggtaaattatttagtacacttatct 23080339  T
Q  259 aa 260  Q
    ||    
T  23080338 aa 23080337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 3774890 - 3774811
Alignment:
Q  191 acaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||| ||| ||||||  ||||||||||| || |||||||||| |||||| ||||| | |||||| || ||||||||||||    
T  3774890 acaattcatgtggatatgatactctacttgcactttattacttagtaaacaatttgatacacttgcct-aatccgaccatc 3774811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 8969776 - 8969824
Alignment:
Q  212 ctctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||||||| |||||||||| |||||  ||||||| |||||||||||    
T  8969776 ctctacttacactttattactttgtaaataatttggtacacttgtctaa 8969824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 21302015 - 21301914
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||| |||||||  | |  ||||||||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||| |||||| ||    
T  21302015 aataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcct 21301916  T
Q  259 aa 260  Q
    ||    
T  21301915 aa 21301914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 20429807 - 20429696
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||||||||  | | |||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||| |||| || ||| || ||    
T  20429807 aataagtaacgcgaattgtgtggatgaaatgacaatccttatagatacgatactctacttatcattttattacttggtaaacaatttagtacacatgcct 20429708  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  20429707 -aatccgaccatc 20429696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 27542930 - 27543028
Alignment:
Q  173 aattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||||||| ||  ||||| ||| ||||||| |||||||||||| | |||||| |||||||||||||||| | ||||| ||||||| ||||||||    
T  27542930 aattgcctagttggaacaacaattcatgtggatacgatactctacttatactttatttcttggtaaacgatttgatacacttatctaaattcgaccatc 27543028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 12759461 - 12759372
Alignment:
Q  183 ttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||| |||||| | | ||||||| |||||||||||| || ||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  12759461 ttgaaacgacaatacttgtggatacgatactctacttatcactttattacttggtaaacaatttggtacacttgtctaaatcagaccatc 12759372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 12805892 - 12806003
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||||| |||||  | | ||||| |||||||||| ||||||  |||||||||||| || |||||||||||||||| |||||||| |||||| ||    
T  12805892 aataagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaatgatttggtacacttgcct 12805991  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  12805992 -aatccgaccatc 12806003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 20339766 - 20339852
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttg 246  Q
    ||||||||||   |||||||| |||||||  ||||  ||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  20339766 aataagtaacatcaattgcctggttgaaacaacaacacatgtgaatacgatactctacttacattttattacttggtaaacgatttg 20339852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 7148062 - 7147974
Alignment:
Q  182 gttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||| |||||||||| |||| || ||||||||||||  ||||| |||||||||||||||||||| || ||| || ||||||||||||    
T  7148062 gttgaaacgacaatccatgtggagacgatactctacttattttttagtacttggtaaacgatttggtacatttgcct-aatccgaccatc 7147974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 16245731 - 16245832
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||| ||||||  | |  ||||||| ||||||| ||||||  |||||||||||| || ||||||||||||||||||| ||||| |||||||||    
T  16245731 aataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaacgagttggtacacttgtct 16245830  T
Q  259 aa 260  Q
    ||    
T  16245831 aa 16245832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 21825904 - 21825965
Alignment:
Q  193 aatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcactt 254  Q
    ||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||    
T  21825904 aatccatgtggatacgatactctacttacactttattactcggtaaacgatttggtacactt 21825965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 28729038 - 28728929
Alignment:
Q  163 aagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaa 261  Q
    |||||||||||||||  | ||||||| ||||||| || ||||||| |||||||||||| || ||||||||||| ||||  |||||   |||||| |||||    
T  28729038 aagtaacgcgaattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaattatttgacacacttgcctaaa 28728939  T
Q  262 tccgaccatc 271  Q
    ||||||||||    
T  28728938 tccgaccatc 28728929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 6290000 - 6289889
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||| |||||||| |||   ||||||| ||||||| ||||||  |||||||||||| || ||||||||||||||||||||||| | || ||| ||    
T  6290000 aataagtaatgcgaattgtctacacgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaacgatttgatacatttgcct 6289901  T
Q  259 aaatccgaccatc 271  Q
     ||||||||||||    
T  6289900 -aatccgaccatc 6289889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 31286048 - 31286127
Alignment:
Q  191 acaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||| | ||||||| ||| |||| ||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  31286048 acaatccctgtggatacgatattctagttacactttattacttggtaaatgatttggtacacttgtct-aatccgaccatc 31286127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 23056200 - 23056283
Alignment:
Q  187 aatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccat 270  Q
    |||||||| |||||||||||| |||||| ||||||| || ||||||||||||||| |||| | ||||||  ||||| |||||||    
T  23056200 aatgacaacccatatggatacgatactcaacttacacttcattacttggtaaacgttttgatacacttgcataaattcgaccat 23056283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 10917984 - 10917914
Alignment:
Q  191 acaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||||| ||||||| |||||||||||| || ||||||| ||||||||||||||||| |||||| ||||    
T  10917984 acaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaa 10917914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 8143670 - 8143617
Alignment:
Q  201 tggatacaatactctacttacattttattacttggtaaacgatttggtgcactt 254  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||| |||||    
T  8143670 tggatacaatactctacttacactttattgcttagtaaacgatttggtacactt 8143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 18736717 - 18736774
Alignment:
Q  203 gatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||| ||| |||||||| | ||||||||||||||||||||||||| |||||||||||    
T  18736717 gatacgatattctacttatactttattacttggtaaacgatttggtacacttgtctaa 18736774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 821549 - 821605
Alignment:
Q  193 aatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    ||||||| ||||||| |||||||||||| || |||||||||||||||||||||||||    
T  821549 aatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggt 821605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 10744974 - 10744910
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggt 248  Q
    |||| |||||||| |||||| || |||||||||||| || |||||||||||||||||||||||||    
T  10744974 gaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaacgatttggt 10744910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 25756772 - 25756660
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacat-tttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||||| | ||||||||||||  || ||||||   | ||||||| ||||||||||||| | ||||||| ||| |||| ||||| || |||||| ||    
T  25756772 aataagtaacacaaattgcctagttagaacgacaatttttgtggatacgatactctacttacttctttattatttgataaatgattttgtacacttgcct 25756673  T
Q  259 aaatccgaccatc 271  Q
    |||||||||||||    
T  25756672 aaatccgaccatc 25756660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 12752254 - 12752192
Alignment:
Q  209 atactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||| ||||||| || |||||||||||||||||||||| |||||| ||||||  |||||||    
T  12752254 atactccacttacacttcattacttggtaaacgatttggtacacttggctaaatatgaccatc 12752192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 2167660 - 2167719
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| |||||||||||| || ||||||||||||||| ||||||||| |||||||||||    
T  2167660 tggatacgatactctacttatcactttattacttggtaa-cgatttggtacacttgtctaa 2167719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 8445894 - 8445846
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctacttacattttattactt 233  Q
    |||| |||||||||| |||| ||||||||||||||||| ||||||||||    
T  8445894 gaaacgacaatccatgtggacacaatactctacttacactttattactt 8445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 8557131 - 8557211
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaa 239  Q
    |||||||||||| |||||  ||  ||||| |||||||||| ||||||| |||||||||||| || ||||||||| ||||||    
T  8557131 aataagtaacgcaaattgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttattactcggtaaa 8557211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 18458467 - 18458527
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| |||||||||||| || ||||||||||| ||||| ||||||| |||||||||||    
T  18458467 tggatacgatactctacttatcactttattacttgataaacaatttggtacacttgtctaa 18458527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 17438433 - 17438527
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcactt 254  Q
    ||||||||||| ||||||  | |  |||| |||||||||| ||||||  |||||||||||| |||||||| ||||||| ||||||||||| |||||    
T  17438433 aataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcattttataacttggt-aacgatttggtacactt 17438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 19908363 - 19908308
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  19908363 tggatacgatactatacttatcattttattatttggtaaacgatttggtacacttg 19908308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 22349465 - 22349410
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    ||||||| |||||||||||| || ||||||| ||||||||||||||||| ||||||    
T  22349465 tggatacgatactctacttatcactttattatttggtaaacgatttggtacacttg 22349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 21019616 - 21019686
Alignment:
Q  178 cctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggt 248  Q
    |||||||| || |||||||| | ||||||  |||||||||||| | |||||||||||||| | ||||||||    
T  21019616 cctagttggaacgacaatccttgtggataagatactctacttatactttattacttggtagatgatttggt 21019686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 21074542 - 21074628
Alignment:
Q  162 taagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggt 248  Q
    ||||||||| ||||| | |||||| || |||||| |   ||||||| |||||||||||||| ||||||||||| || | ||||||||    
T  21074542 taagtaacgtgaattacatagttggaacgacaattctggtggatacgatactctacttacactttattacttgatagatgatttggt 21074628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 3116421 - 3116521
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||| ||||||  | |  |||| |||||||| | ||||||| |||||| ||||| || ||||||||||||||||| ||||||| |||||| ||    
T  3116421 aataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaacaatttggtacacttgcct 3116519  T
Q  259 aa 260  Q
    ||    
T  3116520 aa 3116521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 21325396 - 21325336
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| ||||| |||||| || ||||||||||||||||| ||||||| |||||| ||||    
T  21325396 tggatacgatactatacttatcagtttattacttggtaaacaatttggtacacttgcctaa 21325336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 12206 - 12098
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    |||||||| ||| | ||| || ||||||||||||||||||||| |||| ||| | |||||| || ||||||||||||||||| ||||||| |||||| ||    
T  12206 aataagtagcgcaagttgtcttgttgaaatgacaatccatatgaatacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgcct 12107  T
Q  259 aaatccgac 267  Q
    |||||||||    
T  12106 aaatccgac 12098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 3603 - 3531
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtc 257  Q
    |||| |||||||||| ||||||| |||||||||||| || ||||||||||||| ||| | ||||| ||||||||    
T  3603 gaaaggacaatccatgtggatacgatactctacttatcactttattacttggttaac-aattggtacacttgtc 3531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 29973 - 29909
Alignment:
Q  190 gacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcactt 254  Q
    |||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  29973 gacaatctctatggataccatactctacttacactttattacttggtaaacgatttggtacactt 29909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 54927 - 54846
Alignment:
Q  190 gacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||| | |||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||  ||||||||||||    
T  54927 gacaatccctgtggatacaatactctacttatcactttattacttggtaaacgatttggtacactt-tcctaatccgaccatc 54846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 48223 - 48279
Alignment:
Q  189 tgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttg 246  Q
    ||||||||||||  ||||| |||||||||||| || |||||||||||||||||||||||    
T  48223 tgacaatccata--gatacgatactctacttatcactttattacttggtaaacgatttg 48279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 160 - 271
Target Start/End: Original strand, 13907 - 14021
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatg-----gatacaatactctacttacattttattacttggtaaacgatttggtgcactt 254  Q
    |||||||||||| ||||| ||||||| ||||||||||||| ||     |||| |||  |||||||||| || |||||||||||||||||||| | |||||    
T  13907 aataagtaacgctaattgtctagttggaatgacaatccatgtgttcacgatataat--tctacttacacttaattacttggtaaacgatttgatacactt 14004  T
Q  255 gtctaaatccgaccatc 271  Q
    | ||||||| |||||||    
T  14005 gcctaaatctgaccatc 14021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 3225 - 3149
Alignment:
Q  184 tgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||||||||||||| | ||||||| ||||||||| |||| ||||||||||||||||| |||| || |||||| ||||    
T  3225 tgaaatgacaatccgtgtggatacgatactctacatacactttattacttggtaaacaattttgtacacttgcctaa 3149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 800 - 724
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    |||| |||||||| | | |||||||||||||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  800 gaaacgacaatccttgttgatacaatactctacttatcactttattacttggtaaacgatttggtacacttgcctaa 724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 89856 - 89956
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggtgcacttgtcta 259  Q
    |||||||||||||| |||  |||  |||| |||||| | | | ||||  |||||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  89856 aataagtaacgcgagttgtttagacgaaacgacaatacttgtagatatgatactctacttacactttattacttggtaaacgatttgatacacttgtcta 89955  T
Q  260 a 260  Q
    |    
T  89956 a 89956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 22364 - 22289
Alignment:
Q  173 aattgcctagttgaaatgacaatccatatggatacaatactctacttacattttattacttggtaaacgatttggt 248  Q
    |||||||||||||| | ||||||||   || |||| ||||||||||||||||| |||| |||||||||||||||||    
T  22364 aattgcctagttgatacgacaatcctcgtgcataccatactctacttacatttcattaattggtaaacgatttggt 22289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 78691 - 78580
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||||||| ||||  | ||||||| |||||||| ||||||||| || ||  ||||| || |||||||||||||||||||| |||| |||||| ||    
T  78691 aataagtaacgcggattggtttgttgaaacgacaatccttatggatacgatgcttaacttatcagtttattacttggtaaacgatatggtacacttgcct 78592  T
Q  259 aaatccgaccat 270  Q
    || | |||||||    
T  78591 aatttcgaccat 78580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 4485 - 4570
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatt 244  Q
    |||||||||| |||||||  ||   ||||||||||||||| ||||||| ||||||| |||| |||||| |||||||||||||||||    
T  4485 aataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgatt 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 168341 - 168401
Alignment:
Q  201 tggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtctaa 260  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  168341 tggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaa 168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 2442 - 2371
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||| |||||||| ||||||| |||||||||||| |  ||||||| ||||||||||||||||| ||||||    
T  2442 gaaatgtcaatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacacttg 2371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 2473 - 2402
Alignment:
Q  185 gaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttg 255  Q
    |||||| |||||||| ||||||| |||||||||||| |  ||||||| ||||||||||||||||| ||||||    
T  2473 gaaatgtcaatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacacttg 2402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 5321 - 5387
Alignment:
Q  204 atacaatactctacttacattttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| | ||||| ||| ||||| ||||||    
T  5321 atacaatactctagttacattttattacttgataaacgatttgatacactt-tcttaatccaaccatc 5387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 11337 - 11225
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatttggtgcacttgtct 258  Q
    ||||||||| || |||||  | |||||||  ||||||||| | ||||  |||||||||||| || ||||||| ||| ||||| |||| || |||||||||    
T  11337 aataagtaatgcaaattgtttggttgaaacaacaatccatgtagatatgatactctacttatcactttattatttgataaacaatttagtacacttgtct 11238  T
Q  259 aaatccgaccatc 271  Q
    |||||| ||||||    
T  11237 aaatccaaccatc 11225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 15497 - 15578
Alignment:
Q  190 gacaatccatatggatacaatactctacttac-attttattacttggtaaacgatttggtgcacttgtctaaatccgaccatc 271  Q
    |||||||||| ||||||| ||||||||| ||  | |||||||||||||||| |||||| | |||||| || ||||||||||||    
T  15497 gacaatccatgtggatacgatactctacatattactttattacttggtaaatgatttgatacacttgcct-aatccgaccatc 15578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 35634 - 35549
Alignment:
Q  160 aataagtaacgcgaattgcctagttgaaatgacaatccatatggatacaatactctactta-cattttattacttggtaaacgatt 244  Q
    ||||||||| ||||||||  | |  |||| || ||||||| |||||||||||||||| ||| || ||||||||||| |||||||||    
T  35634 aataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttattacttgataaacgatt 35549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University