View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6399_high_16 (Length: 350)

Name: NF6399_high_16
Description: NF6399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6399_high_16
NF6399_high_16
[»] chr7 (40 HSPs)
chr7 (1-341)||(26605993-26606354)
chr7 (90-143)||(5228137-5228190)
chr7 (90-201)||(23602271-23602394)
chr7 (90-143)||(28914852-28914905)
chr7 (91-136)||(33342795-33342840)
chr7 (92-143)||(15025223-15025274)
chr7 (90-143)||(4956067-4956120)
chr7 (90-143)||(14707359-14707412)
chr7 (94-143)||(46243358-46243407)
chr7 (90-143)||(48433685-48433738)
chr7 (91-139)||(10624774-10624821)
chr7 (91-143)||(37563227-37563279)
chr7 (154-204)||(29357795-29357845)
chr7 (97-143)||(43440756-43440802)
chr7 (90-143)||(12166149-12166202)
chr7 (90-143)||(24030052-24030104)
chr7 (90-143)||(32376506-32376559)
chr7 (94-143)||(37665811-37665860)
chr7 (154-199)||(46570022-46570067)
chr7 (91-143)||(20529963-20530015)
chr7 (92-136)||(26455982-26456026)
chr7 (91-143)||(38378286-38378338)
chr7 (90-141)||(3961383-3961434)
chr7 (154-204)||(9668866-9668915)
chr7 (91-133)||(13295351-13295393)
chr7 (90-143)||(27454078-27454132)
chr7 (159-201)||(46243288-46243330)
chr7 (106-143)||(1576373-1576410)
chr7 (106-143)||(10091448-10091485)
chr7 (90-143)||(31793535-31793588)
chr7 (106-143)||(40273888-40273925)
chr7 (91-143)||(6548688-6548740)
chr7 (154-198)||(8133846-8133890)
chr7 (154-198)||(8249705-8249749)
chr7 (101-141)||(20013650-20013690)
chr7 (91-143)||(22156164-22156216)
chr7 (91-143)||(22212079-22212131)
chr7 (152-196)||(32376442-32376486)
chr7 (91-143)||(46195985-46196037)
chr7 (91-143)||(48258160-48258212)
[»] chr4 (36 HSPs)
chr4 (94-201)||(49607561-49607666)
chr4 (94-200)||(49607888-49607992)
chr4 (94-198)||(38690666-38690782)
chr4 (91-154)||(49811384-49811447)
chr4 (90-143)||(37574339-37574392)
chr4 (92-139)||(37889583-37889630)
chr4 (93-143)||(35733441-35733491)
chr4 (90-143)||(11491194-11491247)
chr4 (94-143)||(21200597-21200645)
chr4 (91-136)||(35305056-35305101)
chr4 (90-143)||(46283189-46283242)
chr4 (90-143)||(56555615-56555668)
chr4 (91-143)||(16556518-16556570)
chr4 (94-142)||(29889757-29889805)
chr4 (94-141)||(2931133-2931180)
chr4 (91-141)||(45355694-45355744)
chr4 (91-141)||(45369435-45369485)
chr4 (90-143)||(40406935-40406988)
chr4 (91-143)||(22525455-22525507)
chr4 (92-143)||(25234835-25234886)
chr4 (154-201)||(29889829-29889876)
chr4 (93-144)||(43084513-43084564)
chr4 (154-205)||(43271740-43271790)
chr4 (91-133)||(2766734-2766776)
chr4 (154-204)||(13539890-13539939)
chr4 (110-143)||(22096386-22096419)
chr4 (90-143)||(45847901-45847954)
chr4 (90-143)||(50815774-50815827)
chr4 (91-143)||(22341838-22341890)
chr4 (97-141)||(32037636-32037680)
chr4 (91-143)||(36993108-36993160)
chr4 (91-127)||(42154649-42154685)
chr4 (91-143)||(44251303-44251355)
chr4 (91-139)||(48404113-48404161)
chr4 (90-142)||(54593737-54593788)
chr4 (91-139)||(56360632-56360680)
[»] chr1 (45 HSPs)
chr1 (90-200)||(35195586-35195708)
chr1 (90-194)||(19424050-19424166)
chr1 (90-143)||(29332351-29332404)
chr1 (158-199)||(1862894-1862935)
chr1 (94-139)||(40288310-40288355)
chr1 (91-136)||(41618736-41618781)
chr1 (90-143)||(42946442-42946495)
chr1 (91-143)||(2350351-2350403)
chr1 (91-143)||(10123029-10123081)
chr1 (90-143)||(4126966-4127019)
chr1 (90-143)||(7438688-7438741)
chr1 (90-143)||(24134599-24134652)
chr1 (90-143)||(25031472-25031525)
chr1 (90-143)||(49620039-49620092)
chr1 (91-143)||(2017661-2017712)
chr1 (154-206)||(12662683-12662735)
chr1 (91-143)||(12973254-12973306)
chr1 (91-127)||(22386224-22386260)
chr1 (91-143)||(23368708-23368760)
chr1 (154-198)||(24253694-24253738)
chr1 (91-139)||(27054767-27054815)
chr1 (91-143)||(40061510-40061562)
chr1 (94-138)||(50302830-50302874)
chr1 (91-154)||(3347679-3347742)
chr1 (92-143)||(22779290-22779341)
chr1 (154-193)||(34940467-34940506)
chr1 (91-145)||(4684153-4684207)
chr1 (97-143)||(20267873-20267919)
chr1 (153-199)||(22779222-22779268)
chr1 (90-136)||(43109213-43109259)
chr1 (91-141)||(47651941-47651990)
chr1 (91-141)||(50011576-50011626)
chr1 (90-143)||(12148548-12148601)
chr1 (90-143)||(15417792-15417845)
chr1 (94-139)||(22853740-22853785)
chr1 (90-154)||(25819241-25819303)
chr1 (106-143)||(27980124-27980161)
chr1 (92-133)||(40209892-40209933)
chr1 (160-201)||(40513234-40513275)
chr1 (90-143)||(49239822-49239875)
chr1 (106-143)||(50065077-50065114)
chr1 (90-138)||(16985910-16985958)
chr1 (91-139)||(34702289-34702337)
chr1 (158-198)||(40209970-40210010)
chr1 (91-143)||(46532471-46532523)
[»] chr6 (25 HSPs)
chr6 (91-143)||(5641666-5641718)
chr6 (92-143)||(7164761-7164812)
chr6 (90-143)||(6228235-6228288)
chr6 (90-143)||(18903342-18903395)
chr6 (91-139)||(5757847-5757895)
chr6 (91-143)||(17217025-17217077)
chr6 (91-141)||(29321952-29322002)
chr6 (90-143)||(9763502-9763554)
chr6 (90-143)||(20415537-20415590)
chr6 (106-142)||(1183943-1183979)
chr6 (104-140)||(8330480-8330516)
chr6 (91-143)||(19221767-19221819)
chr6 (91-139)||(31703704-31703752)
chr6 (91-143)||(34884133-34884185)
chr6 (90-143)||(3338282-3338335)
chr6 (94-143)||(32344706-32344755)
chr6 (91-127)||(1128392-1128428)
chr6 (107-143)||(1194696-1194731)
chr6 (155-199)||(1194754-1194798)
chr6 (91-143)||(4854282-4854334)
chr6 (91-143)||(11552938-11552990)
chr6 (91-139)||(15716984-15717031)
chr6 (91-143)||(19748166-19748217)
chr6 (97-141)||(24794877-24794921)
chr6 (102-138)||(35065477-35065513)
[»] chr3 (41 HSPs)
chr3 (90-143)||(1102671-1102724)
chr3 (91-143)||(27394574-27394626)
chr3 (91-154)||(50271785-50271848)
chr3 (90-143)||(8930952-8931005)
chr3 (90-143)||(38668195-38668248)
chr3 (90-139)||(40415537-40415586)
chr3 (91-143)||(29645803-29645855)
chr3 (91-143)||(38414950-38415002)
chr3 (91-143)||(50676843-50676895)
chr3 (91-143)||(54457220-54457272)
chr3 (91-141)||(31435477-31435527)
chr3 (92-138)||(50332935-50332981)
chr3 (90-143)||(11483680-11483733)
chr3 (90-143)||(33528180-33528233)
chr3 (90-143)||(43897669-43897722)
chr3 (94-143)||(45431694-45431743)
chr3 (90-143)||(47864703-47864756)
chr3 (102-143)||(49429527-49429568)
chr3 (91-143)||(27471571-27471623)
chr3 (91-139)||(39739345-39739393)
chr3 (91-143)||(44062018-44062070)
chr3 (90-145)||(24651189-24651244)
chr3 (90-139)||(166859-166908)
chr3 (91-140)||(9738426-9738475)
chr3 (90-139)||(22602178-22602227)
chr3 (91-143)||(985895-985947)
chr3 (91-139)||(36590467-36590514)
chr3 (92-143)||(33830345-33830396)
chr3 (90-141)||(40412336-40412387)
chr3 (92-143)||(48717480-48717531)
chr3 (154-200)||(38414882-38414927)
chr3 (102-136)||(41768447-41768481)
chr3 (154-199)||(166787-166832)
chr3 (109-154)||(29226382-29226427)
chr3 (94-143)||(37756392-37756441)
chr3 (153-206)||(48251568-48251620)
chr3 (106-143)||(50381781-50381818)
chr3 (90-127)||(55426193-55426230)
chr3 (91-143)||(27817044-27817096)
chr3 (154-210)||(34898790-34898845)
chr3 (153-201)||(37133960-37134008)
[»] chr2 (24 HSPs)
chr2 (90-143)||(41541515-41541568)
chr2 (91-143)||(37592198-37592250)
chr2 (90-143)||(42541222-42541275)
chr2 (90-143)||(43027222-43027275)
chr2 (94-143)||(37886204-37886253)
chr2 (92-145)||(40203256-40203309)
chr2 (94-139)||(45201665-45201710)
chr2 (91-143)||(5207159-5207211)
chr2 (91-143)||(34107561-34107613)
chr2 (91-141)||(41750015-41750065)
chr2 (91-141)||(42998704-42998754)
chr2 (90-143)||(33065232-33065285)
chr2 (91-143)||(18949661-18949712)
chr2 (91-139)||(29090486-29090534)
chr2 (91-143)||(42678300-42678352)
chr2 (153-200)||(3192733-3192780)
chr2 (94-141)||(18424131-18424178)
chr2 (90-143)||(5207065-5207118)
chr2 (90-143)||(24202217-24202270)
chr2 (91-136)||(31605572-31605617)
chr2 (91-143)||(1962893-1962944)
chr2 (154-206)||(6635990-6636041)
chr2 (107-143)||(33613597-33613633)
chr2 (111-143)||(43684345-43684377)
[»] chr8 (30 HSPs)
chr8 (94-201)||(19957300-19957419)
chr8 (90-143)||(43413861-43413914)
chr8 (91-143)||(8145840-8145892)
chr8 (91-142)||(4259927-4259978)
chr8 (94-136)||(279976-280018)
chr8 (94-136)||(635834-635876)
chr8 (94-136)||(821637-821679)
chr8 (91-141)||(39104675-39104725)
chr8 (90-143)||(1032637-1032690)
chr8 (90-143)||(17855716-17855769)
chr8 (154-199)||(40444704-40444749)
chr8 (91-143)||(11052560-11052612)
chr8 (91-143)||(38064044-38064096)
chr8 (91-143)||(38289211-38289263)
chr8 (97-136)||(3956727-3956766)
chr8 (154-188)||(18080949-18080983)
chr8 (93-143)||(27102310-27102360)
chr8 (90-139)||(44828407-44828457)
chr8 (91-143)||(8350503-8350556)
chr8 (154-199)||(31220343-31220388)
chr8 (92-141)||(32822184-32822233)
chr8 (153-206)||(42006774-42006826)
chr8 (91-143)||(1360111-1360162)
chr8 (91-143)||(8349459-8349511)
chr8 (91-139)||(10162041-10162088)
chr8 (166-198)||(10621438-10621470)
chr8 (91-139)||(13906597-13906644)
chr8 (153-201)||(23435255-23435302)
chr8 (154-206)||(27077120-27077171)
chr8 (91-139)||(38402739-38402786)
[»] chr5 (26 HSPs)
chr5 (91-143)||(15680877-15680929)
chr5 (90-143)||(38503232-38503285)
chr5 (91-143)||(5039747-5039799)
chr5 (91-143)||(34729538-34729590)
chr5 (93-136)||(12256474-12256517)
chr5 (92-142)||(1572178-1572228)
chr5 (91-140)||(20191511-20191560)
chr5 (90-143)||(31250214-31250267)
chr5 (91-143)||(15470597-15470649)
chr5 (154-194)||(16174873-16174913)
chr5 (92-143)||(26671649-26671701)
chr5 (92-143)||(26943246-26943298)
chr5 (90-137)||(33545362-33545409)
chr5 (91-141)||(3294152-3294202)
chr5 (91-145)||(16303849-16303903)
chr5 (154-204)||(20191436-20191485)
chr5 (154-188)||(34729482-34729516)
chr5 (154-199)||(35112985-35113029)
chr5 (91-140)||(42902041-42902090)
chr5 (106-143)||(43227933-43227970)
chr5 (91-139)||(12375383-12375430)
chr5 (91-139)||(15696283-15696330)
chr5 (91-143)||(17077428-17077480)
chr5 (92-143)||(29413539-29413591)
chr5 (154-198)||(31991812-31991856)
chr5 (91-139)||(42208987-42209035)
[»] scaffold0001 (1 HSPs)
scaffold0001 (91-143)||(419779-419831)
[»] scaffold0087 (1 HSPs)
scaffold0087 (91-139)||(44331-44379)
[»] scaffold0015 (1 HSPs)
scaffold0015 (93-141)||(63840-63889)


Alignment Details
Target: chr7 (Bit Score: 143; Significance: 4e-75; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 341
Target Start/End: Original strand, 26605993 - 26606354
Alignment:
Q  1 aaatgtgtgtctctatcctaaagttagtctgtgcatttggtggtactgtacttgcgtaacagttaagtagaannnnnnnnnnnnnnnnng--gtcaagta 98  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||                    ||||||||    
T  26605993 aaatgtgtgtctctatcctaaagttagtctttgcatttggtggtactgtacttgcgtaacagttaagtagaaattttttattttttttttttgtcaagta 26606092  T
Q  99 gtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggttc------------ctgcatataatatgcattatcccttatcaagt 186  Q
    | | ||||||||||||||||||||||||| |||||||||||| || | | ||||||            || ||||| || |||||||| |||||||||||    
T  26606093 gccaagcggctagagaaattcaccttaaaggtgaataagtggagtgtccagggttcaaaccccggcccctacatatgatttgcattattccttatcaagt 26606192  T
Q  187 gaactaagctcacagaga--------tagaaaaatttatatgaatgatatgatgatattgctcttatagttttatgattatttgctaccttatttctttt 278  Q
    |||||||||||| || ||        |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26606193 gaactaagctcatagggacagttaagtagaaaaatttatatgaacgttatgatgatattgctcttatagttttatgattatttgctatcttatttctttt 26606292  T
Q  279 ctacttttaaattctttctcaggcatagaagtgtacgattggggcacttttcattcttcatct 341  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  26606293 ctacttttaaattctttcgcaggcatagaagtgtacgattggggcac-cttcattcttcatct 26606354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 5228190 - 5228137
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  5228190 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggt 5228137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 23602394 - 23602271
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggttc------------ctgcatataatatgcattatccc 177  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||| | | ||||||            |||||||||||||||||||| ||    
T  23602394 ggtcaagtagtctagtggctaaagaaattcaccttaaaggtgaataagtgaggtgtccggggttcgaactccggtcactgcatataatatgcattattcc 23602295  T
Q  178 ttatcaagtgaactaagctcacag 201  Q
    ||||||| ||| ||||||||||||    
T  23602294 ttatcaaatgagctaagctcacag 23602271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 28914852 - 28914905
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  28914852 ggtcaagtagcctagtggctagagaaattcacctttaaagtgaataagtggggt 28914905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 33342795 - 33342840
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  33342795 gtcaagtagtctagcggctagagaaattcaccttaacagtgaataa 33342840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 15025274 - 15025223
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  15025274 tcaagtagcctagcgggtagagaaattcaccttaaaggtgaataagtggggt 15025223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 4956067 - 4956120
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  4956067 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 4956120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 14707412 - 14707359
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| |||||||||||||||||  |||| |||||||||||||||    
T  14707412 ggtcaagtagtctaacggctagagaaattcactataaaggtgaataagtggggt 14707359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 46243407 - 46243358
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  46243407 aagtattctagcggttagagaaattcaccttaaaggtgaataagtggggt 46243358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 48433685 - 48433738
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  48433685 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 48433738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 10624774 - 10624821
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  10624774 gtcaagtagtcaagcggctagagaaattcacctt-aaagtgaataagtg 10624821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 37563227 - 37563279
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||    
T  37563227 gtcaagtagtctagcggttagagaaattcatcttaaaaatgaataagtagggt 37563279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 29357845 - 29357795
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagaga 204  Q
    ||||||||||  ||||||||||||||||||||||| |||||||||| ||||    
T  29357845 cctgcatatataatgcattatcccttatcaagtgagctaagctcacggaga 29357795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 43440802 - 43440756
Alignment:
Q  97 tagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||||    
T  43440802 tagtctagtggctagagaaattcaccttaaagatgaataagtggggt 43440756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 12166202 - 12166149
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||| |||  |||||||||||||||||||||  ||||||||||||||    
T  12166202 ggtcaagtagtttagtagctagagaaattcaccttaaagatgaataagtggggt 12166149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 24030104 - 24030052
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||    
T  24030104 ggtcaagtagtctag-ggctagagaaattcaccttaaagatgaataaatggggt 24030052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 32376559 - 32376506
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||| ||||||||| ||||||||||||||||  ||||||| ||||||    
T  32376559 ggtcaagtagtttagcggctaaagaaattcaccttaaagttgaataaatggggt 32376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 37665860 - 37665811
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||| ||||| |||||||||||||||| | |||||||||||||    
T  37665860 aagtagtctagtggctaaagaaattcaccttaaaggcgaataagtggggt 37665811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 46570022 - 46570067
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcac 199  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||    
T  46570022 cctgcataaactatgcattatcccttatcaagtgagctaagctcac 46570067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 20530015 - 20529963
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| | | || |||||||||||||||||||| |||||||||||||||    
T  20530015 gtcaagtagcccaacgactagagaaattcaccttaaaggtgaataagtggggt 20529963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 26455982 - 26456026
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||    
T  26455982 tcaagtagtctagtggctagagaaattcacctttaaggtgaataa 26456026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 38378338 - 38378286
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||  ||| || |||||||||||||||||||| ||||||||||||||    
T  38378338 gtcaagtagcttagtgggtagagaaattcaccttaaaaatgaataagtggggt 38378286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 3961383 - 3961434
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||||||||| ||||  |||||||||||||||||| ||| ||||||||||||    
T  3961383 ggtcaagtagcctagtagctagagaaattcacctttaaaatgaataagtggg 3961434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 9668866 - 9668915
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagaga 204  Q
    |||||||| |||||||||||||||||| ||||||| |||||||||| ||||    
T  9668866 cctgcata-aatatgcattatcccttaccaagtgagctaagctcacggaga 9668915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 13295351 - 13295393
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaa 133  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||    
T  13295351 gtcaagtagcctagcggctggagaaattcaccttaaaggtgaa 13295393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 27454132 - 27454078
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaag-tgaataagtggggt 143  Q
    |||||||||| |||| |||||||||||||||||||  ||| ||||||||||||||    
T  27454132 ggtcaagtagcctagtggctagagaaattcaccttttaagatgaataagtggggt 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 46243330 - 46243288
Alignment:
Q  159 atataatatgcattatcccttatcaagtgaactaagctcacag 201  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||    
T  46243330 atataatatgcattatcccttaccaaatgagctaagctcacag 46243288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 1576410 - 1576373
Alignment:
Q  106 ggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||||||||||||  |||||||||||||    
T  1576410 ggctagagaaattcaccttaaaaacgaataagtggggt 1576373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 10091448 - 10091485
Alignment:
Q  106 ggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  10091448 ggctagagaaattcaccttaaaggtgaataagttgggt 10091485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 31793588 - 31793535
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||  |||| |||||||||||| |||||||||  ||||||||||||||    
T  31793588 ggtcaagtaacctagtggctagagaaatccaccttaaagatgaataagtggggt 31793535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 40273925 - 40273888
Alignment:
Q  106 ggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  40273925 ggctagagaaattcaccttaaagatgaataagtggggt 40273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 6548688 - 6548740
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| ||||||||  ||||||||||||||||| |||||  ||||||||    
T  6548688 gtcaagtagcctagcggccggagaaattcaccttaaaggtgaaatagtggggt 6548740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 8133846 - 8133890
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctca 198  Q
    |||||||| | |||||||||||| ||||||||||| |||||||||    
T  8133846 cctgcataaattatgcattatccattatcaagtgagctaagctca 8133890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 8249749 - 8249705
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctca 198  Q
    |||||||||| |||||||||||| ||| ||||||| |||||||||    
T  8249749 cctgcatatattatgcattatcctttaccaagtgagctaagctca 8249705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 20013690 - 20013650
Alignment:
Q  101 ctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||||||||||||||||||| |||||| ||| |||||||||    
T  20013690 ctagcggctagagaaattcatcttaaaggtggataagtggg 20013650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 22156216 - 22156164
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| || |||||||||||| |||| |  ||||||||||||||    
T  22156216 gtcaagtagtctagtggttagagaaattcatcttatagatgaataagtggggt 22156164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 22212131 - 22212079
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| || |||||||||||| |||| |  ||||||||||||||    
T  22212131 gtcaagtagtctagtggttagagaaattcatcttatagatgaataagtggggt 22212079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 32376486 - 32376442
Alignment:
Q  152 ttcctgcatataatatgcattatcccttatcaagtgaactaagct 196  Q
    ||||||||||||||||||||| ||||||| ||||| | |||||||    
T  32376486 ttcctgcatataatatgcattgtcccttaccaagtaagctaagct 32376442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 46196037 - 46195985
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||| || ||||||||| ||||||||||||||||| |||||  ||||||||    
T  46196037 gtcaagcagactagcggctggagaaattcaccttaaaggtgaaatagtggggt 46195985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 48258160 - 48258212
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||| |||| |||||||||||| |||||||| ||||| |||||||| ||||||    
T  48258160 gtcaggtagcctagcggctagacaaattcactttaaaggtgaataaatggggt 48258212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 49607666 - 49607561
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggttcctgcatataatatgcattatcccttatcaagtgaactaa 193  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||| |   |||||  ||||||||||||||||||||||||| ||||| | ||||    
T  49607666 aagtagtctatcggctagagaaattcaccttaaaggtgaataagtggggtgtctggggtt--tgcatataatatgcattatcccttaccaagtaagctaa 49607569  T
Q  194 gctcacag 201  Q
    ||||||||    
T  49607568 gctcacag 49607561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 49607992 - 49607888
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggttcctgcatataatatgcattatcccttatcaagtgaactaa 193  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||||| | ||||| |  ||||||||||||||||||||||||| ||||| | ||||    
T  49607992 aagtagtctagtggctagagaaattcaccttaaaggtaaataagtggggtgt-ctgggat-ttgcatataatatgcattatcccttaccaagtaagctaa 49607895  T
Q  194 gctcaca 200  Q
    |||||||    
T  49607894 gctcaca 49607888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 38690782 - 38690666
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggtt------------cctgcatataatatgcattatcccttat 181  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||| | | |||||            |||||||||||||||||||||||||||     
T  38690782 aagtagcctagcggctagagaaattcaccttaaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttac 38690683  T
Q  182 caagtgaactaagctca 198  Q
    ||||||| |||||||||    
T  38690682 caagtgagctaagctca 38690666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 49811384 - 49811447
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggttc 154  Q
    ||||||||| |||||||||||||||||||| |||||| |||||||||||||||||  |||||||    
T  49811384 gtcaagtagcctagcggctagagaaattcatcttaaaggtgaataagtggggtattatgggttc 49811447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 37574392 - 37574339
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  37574392 ggtcaagtagcctagtggctagagaaattcaccttaaaggtgaataagtggggt 37574339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 37889583 - 37889630
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  37889583 tcaagtagcctagtggctagagaaattcaccttaaaagtgaataagtg 37889630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 35733491 - 35733441
Alignment:
Q  93 caagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  35733491 caagtagtctagcggctaaagaaactcaccttaaaggtgaataagtggggt 35733441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 11491194 - 11491247
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  11491194 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 11491247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 21200645 - 21200597
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  21200645 aagtagtctaacggctagagaaattcacctt-aaagtgaataagtggggt 21200597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 35305101 - 35305056
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  35305101 gtcaagtagcctagcggctagagaaaatcaccttaaaagtgaataa 35305056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 46283242 - 46283189
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||| | ||||||||||||||||||||  ||||||||||||||    
T  46283242 ggtcaagtagtctagtgactagagaaattcaccttaaagatgaataagtggggt 46283189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 56555668 - 56555615
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  56555668 ggtcaggtagcctaacggctagagaaattcaccttaaaggtgaataagtggggt 56555615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 16556570 - 16556518
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  16556570 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 16556518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 29889757 - 29889805
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtgggg 142  Q
    |||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  29889757 aagtagcctagcggctagagaaattcaccttaaatgtgaataaatgggg 29889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 2931180 - 2931133
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  2931180 aagtagtctagtggctagagaaattcaccttaaagatgaataagtggg 2931133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 45355694 - 45355744
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||||    
T  45355694 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggg 45355744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 45369435 - 45369485
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||||    
T  45369435 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggg 45369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 40406935 - 40406988
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| || |||| ||||||||||||||||||||||  ||||||||||||||    
T  40406935 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggt 40406988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 22525507 - 22525455
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||| ||||| ||||| |||||||||||| |||||| |||||||||||||||    
T  22525507 gtcaaatagtccagcggttagagaaattcatcttaaaggtgaataagtggggt 22525455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 25234835 - 25234886
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||| || |||||||||||||||||||  ||||||| ||||||    
T  25234835 tcaagtagtctagtggttagagaaattcaccttaaagatgaataactggggt 25234886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 29889829 - 29889876
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacag 201  Q
    |||||||||||||||||||||||||||   ||||| ||||||||||||    
T  29889829 cctgcatataatatgcattatcccttacatagtgagctaagctcacag 29889876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 43084564 - 43084513
Alignment:
Q  93 caagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggta 144  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||||||    
T  43084564 caagtagtttaatggctagagaaattcaccttaaagatgaataagtggggta 43084513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 43271740 - 43271790
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagagat 205  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||| |||||    
T  43271740 cctgcatataatatgcaatatccc-tatcaactgaactaagctcacggagat 43271790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 2766734 - 2766776
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaa 133  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||    
T  2766734 gtcaagtagcctagcggctggagaaattcaccttaaaggtgaa 2766776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 13539890 - 13539939
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagaga 204  Q
    |||||||| |||||||||||||||||| ||||||| |||||||||| ||||    
T  13539890 cctgcata-aatatgcattatcccttaccaagtgagctaagctcacggaga 13539939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 22096386 - 22096419
Alignment:
Q  110 agagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||||| ||||||||||||||    
T  22096386 agagaaattcaccttaaaaatgaataagtggggt 22096419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 45847901 - 45847954
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| || |||| ||||| ||||||||||||||||  ||||||||||||||    
T  45847901 ggtcaagcagcctaggggctaaagaaattcaccttaaagatgaataagtggggt 45847954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 50815827 - 50815774
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||| ||  |||||| |||||||    
T  50815827 ggtcaagtagcctagtggctagagaaattcacctttaagatgaatatgtggggt 50815774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 22341838 - 22341890
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| ||||||| |||||||||||||||| ||  |||| |||||||||    
T  22341838 gtcaagtagcctagcggttagagaaattcacctttaagatgaacaagtggggt 22341890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 32037680 - 32037636
Alignment:
Q  97 tagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||| |||||||||||||||||||| ||||| |||||||| ||||    
T  32037680 tagtttagcggctagagaaattcactttaaatgtgaataaatggg 32037636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 36993160 - 36993108
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||| |||| |||| ||||||||||||||||||||||  ||||||| ||||||    
T  36993160 gtcaggtagcctagtggctagagaaattcaccttaaagatgaataattggggt 36993108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 42154685 - 42154649
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaa 127  Q
    ||||||||| | |||||||||||||||||||||||||    
T  42154685 gtcaagtagcccagcggctagagaaattcaccttaaa 42154649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 44251303 - 44251355
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||| ||| |||||||||||| ||||||||||||||  ||||||| ||||||    
T  44251303 gtcaaatagcctagcggctagaaaaattcaccttaaagatgaataaatggggt 44251355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 48404113 - 48404161
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||| |||| ||||| ||||||||||||||||  ||||||||||    
T  48404113 gtcaagtagcctagtggctaaagaaattcaccttaaagatgaataagtg 48404161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 54593737 - 54593788
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtgggg 142  Q
    |||||||||| ||||| ||| |||||||||||||||||| ||| |||||||||    
T  54593737 ggtcaagtagcctagcagcttgagaaattcaccttaaaa-tgattaagtgggg 54593788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 56360680 - 56360632
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||| ||||||| | | ||||||||||||||||||| |||||||||||    
T  56360680 gtcaaatagtctaacagttagagaaattcaccttaaaggtgaataagtg 56360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 35195586 - 35195708
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggtt------------cctgcatataatatgcattatccc 177  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||||||| || ||| |||||            ||||||||||||||||||||||||    
T  35195586 ggtcaagtagcctagcggctagagaaatttaccttaaaggtgaataagtggagtgtacggggttcgaaccctggtccctgcatataatatgcattatccc 35195685  T
Q  178 ttatcaagtgaactaagctcaca 200  Q
    |||| |||||| |||||||||||    
T  35195686 ttattaagtgagctaagctcaca 35195708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 194
Target Start/End: Complemental strand, 19424166 - 19424050
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggtt------------cctgcatataatatgcattatccc 177  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||||            ||||||||||||||||||||||||    
T  19424166 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatccc 19424067  T
Q  178 ttatcaagtgaactaag 194  Q
    ||||||| ||| |||||    
T  19424066 ttatcaaatgagctaag 19424050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 29332404 - 29332351
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  29332404 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggt 29332351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 1862894 - 1862935
Alignment:
Q  158 catataatatgcattatcccttatcaagtgaactaagctcac 199  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  1862894 catataatatgcattatcccttatcaagtgagctaagctcac 1862935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 40288355 - 40288310
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  40288355 aagtagtctagcggttagagaaattcatcttaaaagtgaataagtg 40288310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 41618736 - 41618781
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||    
T  41618736 gtcaagtagtctggcggctagagaaattcaccttaaatgtgaataa 41618781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 42946442 - 42946495
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||| |||||||||||||||||||| || |||||||||||||||    
T  42946442 ggtcaagtagcctaacggctagagaaattcacctttaaggtgaataagtggggt 42946495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 2350351 - 2350403
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||||||||| |||||||||| ||||| |||||||||||||||    
T  2350351 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtggggt 2350403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 10123029 - 10123081
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  10123029 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 10123081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 4127019 - 4126966
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||| ||||||| ||||||||||||||  ||||||| ||||||    
T  4127019 ggtcaagtagtctagtggctagataaattcaccttaaagatgaataaatggggt 4126966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 7438741 - 7438688
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||| ||||| ||||||||||||| ||  ||||||||||||||    
T  7438741 ggtcaagtagtctagtggctaaagaaattcacctttaagatgaataagtggggt 7438688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 24134599 - 24134652
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| || |||| ||||||||||||||||||||||  ||||||||||||||    
T  24134599 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggt 24134652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 25031472 - 25031525
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| || |||| ||||||||||||||||||||||  ||||||||||||||    
T  25031472 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggt 25031525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 49620092 - 49620039
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| |||||||||||||||| |||||  ||||||||||||||    
T  49620092 ggtcaagtagcctagtggctagagaaattcactttaaagatgaataagtggggt 49620039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 2017661 - 2017712
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||| ||||||||||||||||||||||| |||| |||||||||    
T  2017661 gtcaagtagtttagtggctagagaaattcaccttaaaa-tgaacaagtggggt 2017712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 12662735 - 12662683
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagagata 206  Q
    ||||||||||||||||| |||||||||| || ||| |||||||||| ||||||    
T  12662735 cctgcatataatatgcaatatcccttattaactgagctaagctcacggagata 12662683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 12973254 - 12973306
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| ||||| ||||||| ||||||||  ||||||||||||||    
T  12973254 gtcaagtagtctagtggctaaagaaatttaccttaaagatgaataagtggggt 12973306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 22386224 - 22386260
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaa 127  Q
    |||||||||||||| ||||||||||||||||||||||    
T  22386224 gtcaagtagtctagtggctagagaaattcaccttaaa 22386260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 23368708 - 23368760
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||| ||||||||||| || |||||||||||||||    
T  23368708 gtcaagtagactagtggctagataaattcacctttaatgtgaataagtggggt 23368760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 24253694 - 24253738
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctca 198  Q
    |||||||| | |||||||||||||||||||||||| |||||||||    
T  24253694 cctgcataaattatgcattatcccttatcaagtgagctaagctca 24253738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 27054815 - 27054767
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||    
T  27054815 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtg 27054767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 40061562 - 40061510
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| |||||||||||| |||||||||  ||||||||||||||    
T  40061562 gtcaagtagcctagtggctagagaaatccaccttaaagatgaataagtggggt 40061510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 50302830 - 50302874
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagt 138  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||    
T  50302830 aagtagtctagtggctagagaaattcaccttaaagatgaataagt 50302874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 3347679 - 3347742
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggttc 154  Q
    |||||| || |||| | ||||||||||||||||||||  |||||||||||||| ||| ||||||    
T  3347679 gtcaagcagcctagtgactagagaaattcaccttaaagatgaataagtggggtgtacggggttc 3347742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 22779341 - 22779290
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||  |||||||||||||||  ||||| |||||||||||||||    
T  22779341 tcaagtagtctattggctagagaaattcattttaaaggtgaataagtggggt 22779290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 34940467 - 34940506
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaa 193  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  34940467 cctgcatataatatgcattatcccttaccaagtgagctaa 34940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 4684153 - 4684207
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtat 145  Q
    |||||||||| ||| |||||||| |||||||||||||  ||||||| ||||||||    
T  4684153 gtcaagtagtttagtggctagagtaattcaccttaaagatgaataaatggggtat 4684207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 20267873 - 20267919
Alignment:
Q  97 tagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||| || ||||||||||||||||||| || ||||||||||||    
T  20267873 tagtctagtggttagagaaattcaccttaaaggtaaataagtggggt 20267919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 22779268 - 22779222
Alignment:
Q  153 tcctgcatataatatgcattatcccttatcaagtgaactaagctcac 199  Q
    ||||| ||| |||||||||||||||||| ||||||| ||||||||||    
T  22779268 tcctgtataaaatatgcattatcccttaccaagtgagctaagctcac 22779222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 43109213 - 43109259
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    |||||||||| |||| ||||||||||||||||||||||  |||||||    
T  43109213 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataa 43109259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 47651990 - 47651941
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||| | || ||||||||||||||||||||||| ||||||||||||    
T  47651990 gtcaagtagcccagtggctagagaaattcaccttaaaa-tgaataagtggg 47651941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 50011626 - 50011576
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||||| ||  |||||||||||||||||||||  ||||||||||||    
T  50011626 gtcaagtagtccagtagctagagaaattcaccttaaagatgaataagtggg 50011576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 12148548 - 12148601
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| ||||||| | | ||||||||||||||||||  ||||||||||||||    
T  12148548 ggtcaagcagtctagtgtccagagaaattcaccttaaagatgaataagtggggt 12148601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 15417792 - 15417845
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| | ||||||||||||| ||||||  ||||||||||||||    
T  15417792 ggtcaagtagcctagtgactagagaaattcatcttaaagatgaataagtggggt 15417845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 22853740 - 22853785
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||| ||||| ||||||||||||| |||||||| |||||||||    
T  22853740 aagtagtatagcgtctagagaaattcatcttaaaagagaataagtg 22853785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 25819303 - 25819241
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggttc 154  Q
    ||||| ||||||||| |||||||  ||||||| || |||||||||||||||||||| | ||||||    
T  25819303 ggtcaggtagtctagtggctaga--aattcacttttaaagtgaataagtggggtatccggggttc 25819241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 27980124 - 27980161
Alignment:
Q  106 ggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  27980124 ggctagagaaatttaccttaaaggtgaataagtggggt 27980161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 40209892 - 40209933
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaa 133  Q
    ||||||||||||| ||| |||||||||||||||||| |||||    
T  40209892 tcaagtagtctagtggccagagaaattcaccttaaaggtgaa 40209933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 40513275 - 40513234
Alignment:
Q  160 tataatatgcattatcccttatcaagtgaactaagctcacag 201  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||    
T  40513275 tataatatgcattatcccttaccaaatgagctaagctcacag 40513234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 49239822 - 49239875
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||  ||| ||||||||||||| ||||||||  ||||||||||||||    
T  49239822 ggtcaagtagcttagtggctagagaaatttaccttaaagatgaataagtggggt 49239875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 50065114 - 50065077
Alignment:
Q  106 ggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  50065114 ggctagagaaattcaccttaaagatgaataagtggggt 50065077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 16985910 - 16985958
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagt 138  Q
    |||||||||  |||| ||||||||||||||||||||||  |||||||||    
T  16985910 ggtcaagtaacctagtggctagagaaattcaccttaaagatgaataagt 16985958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 34702289 - 34702337
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||||||||| ||||| ||||||||| ||||||  ||||||||||    
T  34702289 gtcaagtagtctagtggctaaagaaattcatcttaaagatgaataagtg 34702337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 40209970 - 40210010
Alignment:
Q  158 catataatatgcattatcccttatcaagtgaactaagctca 198  Q
    ||||||||||||||| ||||||| ||||||| |||||||||    
T  40209970 catataatatgcattgtcccttaccaagtgatctaagctca 40210010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 46532471 - 46532523
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||  |||||| ||||||||||||||||||| |||||  ||||||||    
T  46532471 gtcaagtagcttagcggttagagaaattcaccttaaaggtgaaatagtggggt 46532523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 5641666 - 5641718
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5641666 gtcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggt 5641718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 7164812 - 7164761
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7164812 tcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggt 7164761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 6228235 - 6228288
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  6228235 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 6228288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 18903342 - 18903395
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  18903342 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 18903395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 5757847 - 5757895
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||    
T  5757847 gtcaagtagcctggcggctagagaaattcaccttaaatgtgaataagtg 5757895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 17217077 - 17217025
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  17217077 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 17217025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 29321952 - 29322002
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||||||||||||| ||||||||||||||||||||||  | ||||||||||    
T  29321952 gtcaagtagtctagtggctagagaaattcaccttaaagataaataagtggg 29322002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 9763554 - 9763502
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||    
T  9763554 ggtcaagtagcatagtggctagagaaattcacctt-aaagtgaataagtggggt 9763502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 20415537 - 20415590
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| || |||| ||||||||||||||||||||||  ||||||||||||||    
T  20415537 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggt 20415590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 1183943 - 1183979
Alignment:
Q  106 ggctagagaaattcaccttaaaagtgaataagtgggg 142  Q
    |||||||||||||||||||||| ||||||||||||||    
T  1183943 ggctagagaaattcaccttaaaggtgaataagtgggg 1183979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 8330480 - 8330516
Alignment:
Q  104 gcggctagagaaattcaccttaaaagtgaataagtgg 140  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8330480 gcggctagagaaattcaccttaaaggtgaataagtgg 8330516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 19221819 - 19221767
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| || ||||||    
T  19221819 gtcaagtaatctagtggctagagaaattcaccttaaaaatgaacaaatggggt 19221767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 31703704 - 31703752
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||  |||||||||| ||||||||| ||||||||||||||||||    
T  31703704 gtcaagtaacctagcggctaaagaaattcatcttaaaagtgaataagtg 31703752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 34884133 - 34884185
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||||||||||| ||||| |||||||  ||||||| |||||||    
T  34884133 gtcaagtagtctagcggctagataaatttaccttaatggtgaatatgtggggt 34884185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 3338282 - 3338335
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||| ||| |||||| ||| |||||||||||||||| |||||||||| ||||    
T  3338282 ggtcaaatagcctagcgactatagaaattcaccttaaatgtgaataagtagggt 3338335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 32344755 - 32344706
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||||||  ||||||||| ||||| |||||||||||||||    
T  32344755 aagtagtctaacggctaaggaaattcactttaaaggtgaataagtggggt 32344706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 1128392 - 1128428
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaa 127  Q
    |||||||||||||| | ||||||||||||||||||||    
T  1128392 gtcaagtagtctagtgactagagaaattcaccttaaa 1128428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 1194696 - 1194731
Alignment:
Q  107 gctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||||||| ||||||||||||||||||    
T  1194696 gctagagaaattcacctt-aaagtgaataagtggggt 1194731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 1194754 - 1194798
Alignment:
Q  155 ctgcatataatatgcattatcccttatcaagtgaactaagctcac 199  Q
    ||||||||| ||| |||||||||||||||||| | ||||||||||    
T  1194754 ctgcatatattatacattatcccttatcaagtaagctaagctcac 1194798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 4854282 - 4854334
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| || |||||||||| ||||||||  ||||||||||||||    
T  4854282 gtcaagtaggctagtggttagagaaatttaccttaaagatgaataagtggggt 4854334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 11552990 - 11552938
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||| ||||| ||||||||  ||||||||||||||    
T  11552990 gtcaagtagactagtggctagaaaaatttaccttaaagatgaataagtggggt 11552938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 15716984 - 15717031
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||| ||| |||| ||||||||||||||||||||||| ||||||||||    
T  15716984 gtcaaatagcctagtggctagagaaattcaccttaaaa-tgaataagtg 15717031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 19748217 - 19748166
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||  ||||||||||||||||||| ||||||||||||||    
T  19748217 gtcaagtagcctagtggtcagagaaattcaccttaaaa-tgaataagtggggt 19748166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 24794877 - 24794921
Alignment:
Q  97 tagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||    
T  24794877 tagtctagtggctagagaaattcatcttaaatatgaataagtggg 24794921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 35065477 - 35065513
Alignment:
Q  102 tagcggctagagaaattcaccttaaaagtgaataagt 138  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  35065477 tagcggctagagaaattcactttaaatgtgaataagt 35065513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 1102671 - 1102724
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  1102671 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggt 1102724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 27394626 - 27394574
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  27394626 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggt 27394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 50271848 - 50271785
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggttc 154  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  50271848 gtcaagtagtctagcggttagagaaattcaccttaaaggtgaataagtgggatgtacggggttc 50271785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 8930952 - 8931005
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  8930952 ggtcaagtagcctagcggctagagaaattcactttaaaggtgaataagtggggt 8931005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 38668248 - 38668195
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  38668248 ggtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggt 38668195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 40415537 - 40415586
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  40415537 ggtcaagtagtctagctgttagagaaattcaccttaaaagtgaataagtg 40415586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 29645803 - 29645855
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  29645803 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggt 29645855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 38415002 - 38414950
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  38415002 gtcaagtagcctagcggccagagaaattcaccttaaaggtgaataagtggggt 38414950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 50676843 - 50676895
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  50676843 gtcaagtagtctagtggttagagaaattcaccttaaaggtgaataagtggggt 50676895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 54457272 - 54457220
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  54457272 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataaatggggt 54457220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 31435477 - 31435527
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  31435477 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggg 31435527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 50332935 - 50332981
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagt 138  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  50332935 tcaagtagtctagcggctagagaaattcatcttaaaggtgaataagt 50332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 11483733 - 11483680
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||||  |||||||||||||||||||||  ||||||||||||||    
T  11483733 ggtcaagtagtctagttgctagagaaattcaccttaaagatgaataagtggggt 11483680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 33528180 - 33528233
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  33528180 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 33528233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 43897722 - 43897669
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||    
T  43897722 ggtcaagtagcctaacggttagagaaattcaccttaaaggtgaataagtggggt 43897669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 45431743 - 45431694
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  45431743 aagtagcctagcggctagggaaattcaccttaaaggtgaataagtggggt 45431694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 47864756 - 47864703
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  47864756 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 47864703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 49429568 - 49429527
Alignment:
Q  102 tagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  49429568 tagcggctagagaaattcaccttaaaggtgaataagtggggt 49429527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 27471623 - 27471571
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| ||||||||||||| ||||||||  ||||||||||||||    
T  27471623 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggt 27471571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 39739393 - 39739345
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  39739393 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtg 39739345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 44062018 - 44062070
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| ||||||||| ||||||||||||  ||||||||||||||    
T  44062018 gtcaagtagtctagtggctagagacattcaccttaaagatgaataagtggggt 44062070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 24651244 - 24651189
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtat 145  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||||||||||| |||||    
T  24651244 ggtcaaatagtccagcggttagagaaattcaccttaaaggtgaataagtgaggtat 24651189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 166908 - 166859
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||||| |||||||||| |||||||||| ||||| |||||||||||    
T  166908 ggtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtg 166859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 9738475 - 9738426
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtgg 140  Q
    |||||||| ||||||||||| ||||||||||||||||  |||||||||||    
T  9738475 gtcaagtaatctagcggctaaagaaattcaccttaaagatgaataagtgg 9738426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 22602178 - 22602227
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||    
T  22602178 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtg 22602227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 985895 - 985947
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||| ||||| ||||||||||||||||||| ||  ||||||||||||||    
T  985895 gtcaagtaatctagtggctagagaaattcacctttaagatgaataagtggggt 985947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 36590514 - 36590467
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  36590514 gtcaaatagtctagtggctagagaaattcaccttaaaa-tgaataagtg 36590467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 33830345 - 33830396
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| ||  || |||||||||||||||||||| ||||||||||||||    
T  33830345 tcaagtagtttattggttagagaaattcaccttaaaaatgaataagtggggt 33830396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 40412387 - 40412336
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||| |||| ||| ||||||||||||| ||||| |||||||||||||    
T  40412387 ggtcaagtactctaacggttagagaaattcactttaaaggtgaataagtggg 40412336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 48717531 - 48717480
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||||||| |||||||||||||||||  |||| |||||||||    
T  48717531 tcaagtagtttagcggctggagaaattcaccttaaagatgaaaaagtggggt 48717480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 38414927 - 38414882
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcaca 200  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||||    
T  38414927 cctgcatataatatgcattatcccttaccaagtg-gctaagctcaca 38414882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Complemental strand, 41768481 - 41768447
Alignment:
Q  102 tagcggctagagaaattcaccttaaaagtgaataa 136  Q
    |||||||||||||||||||||||||| ||||||||    
T  41768481 tagcggctagagaaattcaccttaaaggtgaataa 41768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 166832 - 166787
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcac 199  Q
    |||||||| | |||||||||||||||| ||||||| ||||||||||    
T  166832 cctgcataaattatgcattatcccttaccaagtgagctaagctcac 166787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 29226427 - 29226382
Alignment:
Q  109 tagagaaattcaccttaaaagtgaataagtggggtatactgggttc 154  Q
    |||||||||||||||||||  |||||||||||||| ||| ||||||    
T  29226427 tagagaaattcaccttaaagatgaataagtggggtgtacggggttc 29226382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 37756392 - 37756441
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||| |||||||| ||||||| |||| ||||| |||||||||||||||    
T  37756392 aagtagcctagcggcgagagaaactcacgttaaaggtgaataagtggggt 37756441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 48251620 - 48251568
Alignment:
Q  153 tcctgcatataatatgcattatcccttatcaagtgaactaagctcacagagata 206  Q
    |||||||||||||||||| |||||| |||||| ||| |||||||||||| ||||    
T  48251620 tcctgcatataatatgcaatatccc-tatcaactgagctaagctcacagggata 48251568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 50381818 - 50381781
Alignment:
Q  106 ggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  50381818 ggctagagaaattcaccttaaagatgaataagtggggt 50381781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 55426230 - 55426193
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaa 127  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  55426230 ggtcaagtagcctagtggctagagaaattcaccttaaa 55426193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 27817044 - 27817096
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||||||||||| ||||||  ||||||| ||||||    
T  27817044 gtcaagtagcctagtggctagagaaattcaacttaaagatgaataaatggggt 27817096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 34898790 - 34898845
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagagatagaaa 210  Q
    ||||||||||||||||| |||||| || ||| |||||||||||||| | ||||||||    
T  34898790 cctgcatataatatgcaatatccc-taccaactgaactaagctcacggggatagaaa 34898845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 37133960 - 37134008
Alignment:
Q  153 tcctgcatataatatgcattatcccttatcaagtgaactaagctcacag 201  Q
    ||||| |||||| ||||||||||| ||| ||||||| ||||||||||||    
T  37133960 tcctgtatataacatgcattatcctttaccaagtgagctaagctcacag 37134008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 41541515 - 41541568
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  41541515 ggtcaagtagcctagcggccagagaaattcaccttaaaagtgaataagtggggt 41541568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 37592198 - 37592250
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  37592198 gtcaagtagtctagcggctagagaaattcaccttaaaggtaaataagtggggt 37592250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 42541275 - 42541222
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  42541275 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgagtaagtggggt 42541222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 43027275 - 43027222
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  43027275 ggtcaagtagtctagtggctagagaaattcaccttaaaggtgaataaatggggt 43027222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 37886204 - 37886253
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  37886204 aagtagtctaacggttagagaaattcaccttaaaggtgaataagtggggt 37886253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 40203256 - 40203309
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtat 145  Q
    ||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||    
T  40203256 tcaagtagtctagtggctagagaaatctaccttaaaaatgaataagtggggtat 40203309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 45201710 - 45201665
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||    
T  45201710 aagtagtctagcagctagaaaaattcaccttaaaagtgaataagtg 45201665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 5207211 - 5207159
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||    
T  5207211 gtcaagtagtctagtggctaaagaaattcatcttaaaggtgaataagtggggt 5207159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 34107613 - 34107561
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  34107613 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 34107561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 41750065 - 41750015
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||||    
T  41750065 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggg 41750015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 42998754 - 42998704
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||| ||||||||||||||||||||||||||| || |||| |||||    
T  42998754 gtcaagtagcctagcggctagagaaattcaccttaaaggtaaatatgtggg 42998704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 33065232 - 33065285
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||| ||||    
T  33065232 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtagggt 33065285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 18949661 - 18949712
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||| ||||    
T  18949661 gtcaagtagtctagtggctagagaaattcacattaaaa-tgaataagttgggt 18949712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 29090534 - 29090486
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||| ||||||||| |||||||||||||||||  ||||||||||    
T  29090534 gtcaagtagcctagcggctggagaaattcaccttaaagatgaataagtg 29090486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 42678300 - 42678352
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||| ||||| || |||||||||||||||||||  ||||||||||||||    
T  42678300 gtcaagtaatctagtggttagagaaattcaccttaaagatgaataagtggggt 42678352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 3192780 - 3192733
Alignment:
Q  153 tcctgcatataatatgcattatcccttatcaagtgaactaagctcaca 200  Q
    |||||||||||||||| ||||||| || ||||||||||||| ||||||    
T  3192780 tcctgcatataatatgtattatccattgtcaagtgaactaaactcaca 3192733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 18424131 - 18424178
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||||| |||| ||||||||||||||||||||||  ||||||||||||    
T  18424131 aagtagcctagtggctagagaaattcaccttaaagatgaataagtggg 18424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 5207118 - 5207065
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||||| ||||| |||||||  |||||||| ||||||||||||    
T  5207118 ggtcaagtagcctagcgactagaaaaattcattttaaaagtaaataagtggggt 5207065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 24202270 - 24202217
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| || ||||||||| ||||||||||||||||| |||||  ||||||||    
T  24202270 ggtcaagcagcctagcggctggagaaattcaccttaaaggtgaaatagtggggt 24202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 31605617 - 31605572
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    |||||||||||||| || |||||||||||| |||||| ||||||||    
T  31605617 gtcaagtagtctagtgggtagagaaattcatcttaaatgtgaataa 31605572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 1962944 - 1962893
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||||| |||||||| |||||||||||  ||||||||||||||    
T  1962944 gtcaagtagcctagcgactagagaa-ttcaccttaaagatgaataagtggggt 1962893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 6635990 - 6636041
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagagata 206  Q
    ||||||||||||||||| |||||| || ||| ||| |||||||||||||||||    
T  6635990 cctgcatataatatgcaatatccc-taccaactgagctaagctcacagagata 6636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 33613597 - 33613633
Alignment:
Q  107 gctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| |||||| |||||||||||||||    
T  33613597 gctagagaaattcaacttaaaggtgaataagtggggt 33613633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 43684377 - 43684345
Alignment:
Q  111 gagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||| |||||||||||||||    
T  43684377 gagaaattcaccttaaaggtgaataagtggggt 43684345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 19957300 - 19957419
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtatactgggtt------------cctgcatataatatgcattatcccttat 181  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||||||| | | |||||            |||||||||||||||||||||||||||     
T  19957300 aagtagcctagctgctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatcccttac 19957399  T
Q  182 caagtgaactaagctcacag 201  Q
    ||||||| ||||| ||||||    
T  19957400 caagtgagctaagttcacag 19957419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 43413861 - 43413914
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  43413861 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 43413914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 8145892 - 8145840
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||  |||||| ||||||||||||||||||| |||||||||||||||    
T  8145892 gtcaagtagcgtagcggttagagaaattcaccttaaaggtgaataagtggggt 8145840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 4259978 - 4259927
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtgggg 142  Q
    ||||||||| |||| ||||||||||||||||||||||  |||||||||||||    
T  4259978 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgggg 4259927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 279976 - 280018
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  279976 aagtagtctagcgactagagaaattcaccttaaaaatgaataa 280018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 635876 - 635834
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  635876 aagtagtctagcgactagagaaattcaccttaaaaatgaataa 635834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 821679 - 821637
Alignment:
Q  94 aagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  821679 aagtagtctagcgactagagaaattcaccttaaaaatgaataa 821637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 39104725 - 39104675
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||||||||||||| |||||||||||| |||||||||  ||||||||||||    
T  39104725 gtcaagtagtctagtggctagagaaatccaccttaaagatgaataagtggg 39104675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 1032690 - 1032637
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| |||| || ||||||||||||||||||||||  ||||||||||||||    
T  1032690 ggtcaagcagtccagtggctagagaaattcaccttaaagatgaataagtggggt 1032637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 17855769 - 17855716
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||  |||||||||||| |||||||| ||||| |||||||||||||||    
T  17855769 ggtcaagtaacctagcggctagaaaaattcactttaaatgtgaataagtggggt 17855716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 40444749 - 40444704
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcac 199  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||    
T  40444749 cctgcatatattatgcattatcccttaccaagtgagctaagctcac 40444704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 11052560 - 11052612
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||  |||| ||||||||||||||||||||||  ||||||||||||||    
T  11052560 gtcaagtaacctagtggctagagaaattcaccttaaagatgaataagtggggt 11052612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 38064096 - 38064044
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||| || || |||||||||||||||||||  ||||||||||||||    
T  38064096 gtcaagtagtccagtggttagagaaattcaccttaaagatgaataagtggggt 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 38289211 - 38289263
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||  ||| ||||||||||||||||||||||  ||||||||||||||    
T  38289211 gtcaagtagcttagtggctagagaaattcaccttaaagatgaataagtggggt 38289263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 3956727 - 3956766
Alignment:
Q  97 tagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  3956727 tagtctagtggctagagaaattcaccttaaaggtgaataa 3956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 18080983 - 18080949
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtga 188  Q
    ||||||||||||||||||||||||||| |||||||    
T  18080983 cctgcatataatatgcattatcccttaccaagtga 18080949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 27102310 - 27102360
Alignment:
Q  93 caagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||| ||||||||||||||||||| ||  |||| |||||||||    
T  27102310 caagtagtctagtggctagagaaattcacctttaacatgaaaaagtggggt 27102360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 44828407 - 44828457
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaag-tgaataagtg 139  Q
    ||||||||||||||  ||||| |||||||||||||||||| ||||||||||    
T  44828407 ggtcaagtagtctaatggctaaagaaattcaccttaaaagatgaataagtg 44828457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 8350556 - 8350503
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaag-tgaataagtggggt 143  Q
    |||||||||||||| || |||| ||||||| |||||||| ||||||||||||||    
T  8350556 gtcaagtagtctagtggttagataaattcatcttaaaagatgaataagtggggt 8350503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 31220388 - 31220343
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcac 199  Q
    ||||||||||  ||||||||||||||| ||||||| ||||||||||    
T  31220388 cctgcatatataatgcattatcccttaccaagtgagctaagctcac 31220343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 32822233 - 32822184
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    ||||||||  |||| || ||||||||||||||||||||||||| ||||||    
T  32822233 tcaagtagcatagctgccagagaaattcaccttaaaagtgaatgagtggg 32822184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 42006826 - 42006774
Alignment:
Q  153 tcctgcatataatatgcattatcccttatcaagtgaactaagctcacagagata 206  Q
    |||||||||||||||||| |||||| || ||| ||| |||||||||||||||||    
T  42006826 tcctgcatataatatgcaatatccc-taccaactgagctaagctcacagagata 42006774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 1360111 - 1360162
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| || ||||||||||||| |||||| ||||||||||||||    
T  1360111 gtcaagtagcctagtggttagagaaattcactttaaaa-tgaataagtggggt 1360162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 8349459 - 8349511
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| || |||| ||||||| ||||||  ||||||||||||||    
T  8349459 gtcaagtagtctagtggttagataaattcatcttaaagatgaataagtggggt 8349511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 10162088 - 10162041
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||  |||| ||||||||||||||||||||||| ||||||||||    
T  10162088 gtcaagtaacctagtggctagagaaattcaccttaaaa-tgaataagtg 10162041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 10621438 - 10621470
Alignment:
Q  166 atgcattatcccttatcaagtgaactaagctca 198  Q
    ||||||||||||||||||||||| |||||||||    
T  10621438 atgcattatcccttatcaagtgagctaagctca 10621470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 13906597 - 13906644
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||| ||| |||| ||||||||||||||||||||||| ||||||||||    
T  13906597 gtcaaatagcctagtggctagagaaattcaccttaaaa-tgaataagtg 13906644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 23435255 - 23435302
Alignment:
Q  153 tcctgcatataatatgcattatcccttatcaagtgaactaagctcacag 201  Q
    |||||||||||||||||| |||||| |||||| ||| ||||||||||||    
T  23435255 tcctgcatataatatgcaatatccc-tatcaactgagctaagctcacag 23435302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 27077120 - 27077171
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagagata 206  Q
    ||||||||||||||||| |||||| || ||| ||| |||||||||||||||||    
T  27077120 cctgcatataatatgcaatatccc-taccaactgagctaagctcacagagata 27077171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 38402786 - 38402739
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||||||| |||||| ||||||| ||||||||| ||||||||||    
T  38402786 gtcaagtagtctaacggctaaagaaatttaccttaaaa-tgaataagtg 38402739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 15680877 - 15680929
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  15680877 gtcaagtagcctagcggttagagaaattcaccttaaaggtgaataagtggggt 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 38503232 - 38503285
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||  ||||||||||||||||||||||  ||||||||||||||    
T  38503232 ggtcaagtagtctattggctagagaaattcaccttaaagatgaataagtggggt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 5039799 - 5039747
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||||||| ||||||||||||| ||||||||  ||||||||||||||    
T  5039799 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggt 5039747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 34729590 - 34729538
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||  ||||| ||||||||||||||||||| |||||||||||||||    
T  34729590 gtcaagtagttaagcggttagagaaattcaccttaaaggtgaataagtggggt 34729538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 12256474 - 12256517
Alignment:
Q  93 caagtagtctagcggctagagaaattcaccttaaaagtgaataa 136  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  12256474 caagtagcctagcggctagagaaattcaccttaaaggtgaataa 12256517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 1572228 - 1572178
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtgggg 142  Q
    ||||||||||||| ||||||||||||||||||| ||  |||||||||||||    
T  1572228 tcaagtagtctagtggctagagaaattcacctttaagatgaataagtgggg 1572178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 20191560 - 20191511
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtgg 140  Q
    |||||||||||||| ||| ||||||||| |||||||| ||||||||||||    
T  20191560 gtcaagtagtctagtggccagagaaatttaccttaaaggtgaataagtgg 20191511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 31250267 - 31250214
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||| || |||| ||||||||||||||||||||||  ||||||||||||||    
T  31250267 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggt 31250214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 15470597 - 15470649
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||||| ||||||    
T  15470597 gtcaagtagtttagtggctagagaaattcaccttaaagatgaataaatggggt 15470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 16174913 - 16174873
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaag 194  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  16174913 cctgtatataatatacattatcccttatcaagtgaactaag 16174873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 26671701 - 26671649
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaag-tgaataagtggggt 143  Q
    ||||||||||||| |||||||||||||||||||  ||| ||||||||||||||    
T  26671701 tcaagtagtctagtggctagagaaattcaccttttaagatgaataagtggggt 26671649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 26943298 - 26943246
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaag-tgaataagtggggt 143  Q
    ||||||||||||| |||||||||||||||||||  ||| ||||||||||||||    
T  26943298 tcaagtagtctagtggctagagaaattcaccttttaagatgaataagtggggt 26943246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 33545362 - 33545409
Alignment:
Q  90 ggtcaagtagtctagcggctagagaaattcaccttaaaagtgaataag 137  Q
    |||||||||| |||| ||||||||||||||||||||||  ||||||||    
T  33545362 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataag 33545409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 3294202 - 3294152
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggg 141  Q
    |||||||||||||||| ||| ||||||||||||||||  ||||||| ||||    
T  3294202 gtcaagtagtctagcgactatagaaattcaccttaaagatgaataaatggg 3294152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 16303903 - 16303849
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggtat 145  Q
    |||||||||| || ||| || | ||||||| ||||||||||||||||||||||||    
T  16303903 gtcaagtagtataacggttaaaaaaattcatcttaaaagtgaataagtggggtat 16303849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 20191485 - 20191436
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcacagaga 204  Q
    ||||||||||| ||||||||||||||| |||||||  ||||||||||||||    
T  20191485 cctgcatataa-atgcattatcccttaccaagtgagttaagctcacagaga 20191436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 34729516 - 34729482
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtga 188  Q
    ||||||||||||||||||||||||||| |||||||    
T  34729516 cctgcatataatatgcattatcccttaccaagtga 34729482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 35112985 - 35113029
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctcac 199  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  35112985 cctgcatataatatgcaatatccc-tatcaactgaactaagctcac 35113029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 42902041 - 42902090
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtgg 140  Q
    |||||||||| ||| ||||||||||||| ||||||||  |||||||||||    
T  42902041 gtcaagtagtttagtggctagagaaatttaccttaaagatgaataagtgg 42902090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 43227970 - 43227933
Alignment:
Q  106 ggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  43227970 ggctagagaaattcaccttaaagatgaataagtggggt 43227933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 12375383 - 12375430
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||| ||| |||| ||||||||||||||||||||||| ||||||||||    
T  12375383 gtcaaatagcctagtggctagagaaattcaccttaaaa-tgaataagtg 12375430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 15696330 - 15696283
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||| ||| |||| ||||||||||||||||||||||| ||||||||||    
T  15696330 gtcaaatagcctagtggctagagaaattcaccttaaaa-tgaataagtg 15696283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 17077480 - 17077428
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||| ||||||||||| ||  ||||||||||||||    
T  17077480 gtcaagtagcctagtggctagataaattcacctttaagatgaataagtggggt 17077428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 29413539 - 29413591
Alignment:
Q  92 tcaagtagtctagcggctagagaaattcaccttaaaag-tgaataagtggggt 143  Q
    ||||||||||||| || ||||||||||||||||  ||| ||||||||||||||    
T  29413539 tcaagtagtctagtggttagagaaattcaccttttaagatgaataagtggggt 29413591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 31991812 - 31991856
Alignment:
Q  154 cctgcatataatatgcattatcccttatcaagtgaactaagctca 198  Q
    ||||||||||  ||||||||||||||| ||||||| |||||||||    
T  31991812 cctgcatatataatgcattatcccttaccaagtgagctaagctca 31991856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 42209035 - 42208987
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    ||||||||| |||| | ||||||||||||||||||||  ||||||||||    
T  42209035 gtcaagtagcctagtgactagagaaattcaccttaaagatgaataagtg 42208987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 419831 - 419779
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtggggt 143  Q
    ||||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  419831 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggt 419779  T

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Target: scaffold0087 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 44331 - 44379
Alignment:
Q  91 gtcaagtagtctagcggctagagaaattcaccttaaaagtgaataagtg 139  Q
    |||||||||||| ||||||||| |||||||||||||| || ||||||||    
T  44331 gtcaagtagtctggcggctagaaaaattcaccttaaatgtaaataagtg 44379  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 63840 - 63889
Alignment:
Q  93 caagtagtctagcggctagagaaattcaccttaaa-agtgaataagtggg 141  Q
    |||||||||||| || ||||||||||||||||||| | ||||||||||||    
T  63840 caagtagtctagtggttagagaaattcaccttaaagaatgaataagtggg 63889  T

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