View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6399_low_15 (Length: 392)
Name: NF6399_low_15
Description: NF6399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6399_low_15 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 344; Significance: 0; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 18 - 385
Target Start/End: Complemental strand, 4592519 - 4592152
Alignment:
| Q |
18 |
aagtatatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
117 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592519 |
aagtatatgtgctggaattccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
4592420 |
T |
|
| Q |
118 |
attggtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttga |
217 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592419 |
attgatacgaatgtaaagagagaggaggtggagaaacttatcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttga |
4592320 |
T |
|
| Q |
218 |
agaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaagt |
317 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592319 |
agaagaaggcagaggagaacacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaagt |
4592220 |
T |
|
| Q |
318 |
aattttttatgcaaagcagttcaacaataattgattgatcttcccctattgaatttaagtgatgatgt |
385 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592219 |
aattttttatgcaaagcagttcaacaataattgattgatcttcccctattgaatttaagtgatgatgt |
4592152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 22 - 377
Target Start/End: Complemental strand, 4563995 - 4563640
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4563995 |
atatgtgctggagttccaatgttgtgttggccattctttggtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaatcg |
4563896 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| |
|
|
| T |
4563895 |
atacgaatgtaaagagagaagaggtggagaaacttgtcaatgaattgatgtcaggagagaaaggaaagaagatgcggcaaaaggcaattgagttgaagaa |
4563796 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaagtaa-t |
320 |
Q |
| |
|
||| | |||||| | ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||||||| | |
|
|
| T |
4563795 |
gaaagtggaggaaaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatc-aatttaagtaact |
4563697 |
T |
|
| Q |
321 |
tttttatgcaaagcagttcaacaataattgattgatcttcccctattgaatttaagt |
377 |
Q |
| |
|
||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
4563696 |
tttttatgcaattcagttcaacgataattaattgatcttcccctattgaatttaagt |
4563640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 22 - 331
Target Start/End: Complemental strand, 4585920 - 4585608
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
4585920 |
atatgtgctggagtgccaatgttgtgttggccattcattgctgatcagccaacaaactgtagaattatttgcaatgaatgggagattgggatggaagttg |
4585821 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| ||||| ||||| |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4585820 |
acaccaatgtgaagagagaggaggtggagaagttggtcaatgaattgatggtgggagagaatggaaagaagatgaggcaaaaggcaatcgagttgaagaa |
4585721 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaa--tttaagt-a |
318 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| || |||||||| ||| |||| |||||||| ||||||||||||||||||| | ||||| | |
|
|
| T |
4585720 |
gaaggcggaggaggacacgagacctggaggttgttcatacataaacttggaaaaagtgattaaggaggttttgcttaaataaaatcaaacctataagtga |
4585621 |
T |
|
| Q |
319 |
attttttatgcaa |
331 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4585620 |
attttttatgcaa |
4585608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 22 - 315
Target Start/End: Original strand, 4613566 - 4613859
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| || ||||||||| ||||||| ||| ||| | |||||||||||| |||||||||||||||| |
|
|
| T |
4613566 |
atatgtgctggagtgccaatgttgtgttggccatttttcgcggatcagccagcaaactgcagatatatatgcaatgaatgggaaattgggatggaaattg |
4613665 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| ||||| ||||| || ||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
4613666 |
acaccaatgtgaagagagatgaggtagagaagctggtcaatgaattgatggtgggagagaaaggaaagaaaatgaggcaaaaggcaattgagttgaagaa |
4613765 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaa |
315 |
Q |
| |
|
|||||| |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| |||| ||| ||||||||| |||| |
|
|
| T |
4613766 |
gaaggcagaggaggacacgagaccaggaggttgttcatatatgaacttggacaaagtgatcaatgaggtgctgctgaaacaaaatcaaacttaa |
4613859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 22 - 310
Target Start/End: Complemental strand, 4560790 - 4560502
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| ||| ||||| |||||||||| ||||||| | ||||||| |
|
|
| T |
4560790 |
atatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaaactgaagatatatttgcaatgaatggaagattggaaacgaaattg |
4560691 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||| || ||| ||||||| |
|
|
| T |
4560690 |
atacaaatgtaaagagggaggacgtggagaaactggtcaatgaattgatgtcctgagataaaggaaagaagatgaggcaaaaggccatggagctgaagaa |
4560591 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaa |
310 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||| ||||||||| |
|
|
| T |
4560590 |
aaaggcggaggtgtacacgagacctggaggttgttcatacatgaacttggagaaagtgattaaggaggtgttgcttaaacaaaatcaaa |
4560502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 22 - 309
Target Start/End: Complemental strand, 4574592 - 4574305
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||| ||| ||||| |||||||||||||||||| | |||||| | |
|
|
| T |
4574592 |
atatgtgctggagttccaatgttatgttggccatttttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcg |
4574493 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |||| || || ||| ||||||| |
|
|
| T |
4574492 |
atactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaagccattgagctgaagaa |
4574393 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaa |
309 |
Q |
| |
|
||||| ||||| | |||||||||||||||||||||||| | |||||||| ||| |||| |||||||||||||||||| |||||||| |
|
|
| T |
4574392 |
gaaggtggaggtggacacgagacctggaggttgttcatacacaaacttggagaaagtgattaaggaggtgttgcttaaacaaaatcaa |
4574305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 306
Target Start/End: Original strand, 4514969 - 4515253
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||| |||||||| |||||| | ||||||| ||||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||||||| ||||| | |
|
|
| T |
4514969 |
atatgcgctggagtgccaatgctttgttggcaattctttggtgatcaaccaacaaactgtagatttatttgcaatgaatgggagattgggatcgaaatcg |
4515068 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| |||||| ||||| |||||||| || || ||||||||||||||||||||||||||||||||||| || ||||||||||||| || |||||||| || |
|
|
| T |
4515069 |
atatgaatgtgaagagagaggaggttgaaaagcttgtcaatgaattgatggtgggagagaaaggaaataaaatgaggaaaaaggttatggagttgaaaaa |
4515168 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
|||||| || ||| ||| |||| ||| || | |||||| |||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4515169 |
gaaggcagacgaggacactagacttggcgggtcttcatacttgaacttggacaaagtgatcaaggaggtgttgcttaaacaaaat |
4515253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 29 - 308
Target Start/End: Complemental strand, 4571249 - 4570970
Alignment:
| Q |
29 |
ctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattggtacgaa |
128 |
Q |
| |
|
||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||| ||| | |||| |||||||||||| || ||||| | ||| || |
|
|
| T |
4571249 |
ctggagttccaatgttgtgttagccattttttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaa |
4571150 |
T |
|
| Q |
129 |
tgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaaggcg |
228 |
Q |
| |
|
||| ||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||| |
|
|
| T |
4571149 |
tgtgaagagaaatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaatataatggagatgaagaagaaggcg |
4571050 |
T |
|
| Q |
229 |
gaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatca |
308 |
Q |
| |
|
|||||| |||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||| ||||||||||||||||| |
|
|
| T |
4571049 |
gaggaggacacgagacctggtggttgttcatacatgaacttggaaaaagtgattaaggaggttttgcttaaataaaatca |
4570970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 310
Target Start/End: Complemental strand, 4557409 - 4557121
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||| ||||| |||| |||||||||||| |||||||||| |
|
|
| T |
4557409 |
atatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattg |
4557310 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| ||||| ||||| || ||||| ||||| | |||||||||||||||| ||| |||||||||||||||||| |||||||| ||| ||| |||||| |
|
|
| T |
4557309 |
acaccaatgtgaagagagatgaggtagagaatttggtcaatgaattgatggagggggagaaaggaaagaagatgtggaaaaagataattgagatgaagac |
4557210 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaa |
310 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||| ||||| ||||| ||| |||| |||||||| ||||||||| ||||||||| |
|
|
| T |
4557209 |
gaaggcggaggaggacacgagacctggtggttgttcatacatgaatttggaaaaagtgattaaggaggttttgcttaaacaaaatcaaa |
4557121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 18 - 306
Target Start/End: Complemental strand, 4480981 - 4480693
Alignment:
| Q |
18 |
aagtatatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
117 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||||||| ||||||||| | ||| ||||| |||||| |||||||||||||||||| | ||| |
|
|
| T |
4480981 |
aagtgtatgtgctggagtgccaatgttgtgttggccattctttgccgatcagccacctaaccgtagaattatttgcaatgaatgggagattggactcgaa |
4480882 |
T |
|
| Q |
118 |
attggtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttga |
217 |
Q |
| |
|
|| | ||| ||||| ||||| || || ||||||| | ||||||||||| ||||||||||||||||||||||||||| | ||||||| || ||||||| |
|
|
| T |
4480881 |
atcgataccaatgtgaagagagaagatgtggagaggttaatcaatgaattgttggtgggagagaaaggaaagaagatgaagcaaaaggccatggagttga |
4480782 |
T |
|
| Q |
218 |
agaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
|||||| ||| |||||| ||| |||||||| ||||||||||| ||||||||||||||| |||| |||||||| ||||||||| ||||| |
|
|
| T |
4480781 |
agaagatggcagaggaggacacaagacctggtggttgttcatacatgaacttggacaaagtgattaaggaggtcttgcttaaacaaaat |
4480693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 300
Target Start/End: Original strand, 4490200 - 4490481
Alignment:
| Q |
19 |
agtatatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaa |
118 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||| |||||| ||| | | ||||| |||||| | | |||||||||||||||||| ||| |
|
|
| T |
4490200 |
agtatatgtgctggagtgccaatgttgtgttggccattttttgctgatcaaccacttagcagtagaattatttgcgaagaatgggagattgggatgaaaa |
4490299 |
T |
|
| Q |
119 |
ttggtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaa |
218 |
Q |
| |
|
||| ||| ||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |
|
|
| T |
4490300 |
ttgataccaatgtaaagagagaagaggtagagaaactgatcaatgaattgatggtgggagagaaaggaaagaagatgaggcaaaaggcgacggagttgaa |
4490399 |
T |
|
| Q |
219 |
gaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
||||||||| | |||| |||||||| || ||| ||||||| ||||||||||||||| |||| ||||| || |||||||| |
|
|
| T |
4490400 |
gaagaaggcagcggaggacacgagactcggtggtagttcatacatgaacttggacaaagtgattaaggatgtcatgcttaaa |
4490481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 3172029 - 3171747
Alignment:
| Q |
18 |
aagtatatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
117 |
Q |
| |
|
|||| ||||||||||| | |||||||||||| ||||||| ||| |||||| ||| | ||| ||||| |||||| | | |||||| |||||||||||||| |
|
|
| T |
3172029 |
aagtgtatgtgctggaatgccaatgttgtgtaggccattttttgctgatcaaccacctaacagtagaattatttgccaagaatggaagattgggatggaa |
3171930 |
T |
|
| Q |
118 |
attggtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttga |
217 |
Q |
| |
|
|||| ||| ||||||||||| | |||||| |||||||| |||| |||||||||||||||||||||||||||||||||||| ||| ||| || ||||||| |
|
|
| T |
3171929 |
attgataccaatgtaaagagaggggaggtagagaaactgatcaacgaattgatggtgggagagaaaggaaagaagatgaggcaaagggccatggagttga |
3171830 |
T |
|
| Q |
218 |
agaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
|||||||||| |||||| || ||| ||| ||||||||||| ||||||||||| ||| |||| |||||||| ||||||||| |
|
|
| T |
3171829 |
agaagaaggcagaggaggatacaagatttggtggttgttcatacatgaacttggataaagtgattaaggaggtcttgcttaaa |
3171747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 25 - 325
Target Start/End: Complemental strand, 4516602 - 4516302
Alignment:
| Q |
25 |
tgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattggta |
124 |
Q |
| |
|
||||| ||||| ||||||||||||||||| || ||| ||| ||||||||||| || ||| ||||| |||||||||||||||||| ||||||| || |
|
|
| T |
4516602 |
tgtgccggagtaccaatgttgtgttggcctttttttgctgagcagccaacaaattgcagatatatttgcaatgaatgggagattggagcagaaattgata |
4516503 |
T |
|
| Q |
125 |
cgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaa |
224 |
Q |
| |
|
| ||||| ||||| |||||||||||||| || |||||||||| ||||||||||| |||||||||||||||||| ||||||| || || ||||||||||| |
|
|
| T |
4516502 |
ccaatgtgaagagagaggaggtggagaagctgatcaatgaattaatggtgggagataaaggaaagaagatgaggcaaaaggccatggaattgaagaagaa |
4516403 |
T |
|
| Q |
225 |
ggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaagtaattttt |
324 |
Q |
| |
|
||| |||||| ||| ||||| || |||||||||||| |||||||||| ||| |||| ||||||||| |||| ||| ||||| | ||| |||| |||||| |
|
|
| T |
4516402 |
ggcagaggaggacacaagaccaggtggttgttcatatgtgaacttggaaaaagtgattaaggaggtgctgctcaaacaaaattagattaaagtgattttt |
4516303 |
T |
|
| Q |
325 |
t |
325 |
Q |
| |
|
| |
|
|
| T |
4516302 |
t |
4516302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 18 - 306
Target Start/End: Complemental strand, 4617310 - 4617022
Alignment:
| Q |
18 |
aagtatatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
117 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||| ||| || ||||||||| |||||||| |||||| ||||||||||||||||| |||||| |
|
|
| T |
4617310 |
aagtatatgcgctggagtgccaatgttgtgttggccattttttgccgaccagccaacagactgtagatttatttgtaatgaatgggagattggtatggaa |
4617211 |
T |
|
| Q |
118 |
attggtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttga |
217 |
Q |
| |
|
|| | ||||||||| ||||| |||||| ||| || || |||||||| |||| | ||||| ||||||||||| |||| | ||||||| || ||||||| |
|
|
| T |
4617210 |
atcgatacgaatgtgaagagagaggagttggcaaagctgatcaatgaagtgatagccggagataaaggaaagaaaatgaagcaaaaggccatggagttga |
4617111 |
T |
|
| Q |
218 |
agaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
|||||||||| ||||||| ||| ||||| || ||||||||||| ||||||||| ||||| | || ||||| |||||||||||| ||||| |
|
|
| T |
4617110 |
agaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttgaacaaagttattaaggatgtgttgcttaaacaaaat |
4617022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 300
Target Start/End: Original strand, 4504248 - 4504523
Alignment:
| Q |
25 |
tgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattggta |
124 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||| |||||||||| || | | |||||| | | |||||||||||||||||| | |||| | |
|
|
| T |
4504248 |
tgtgctggagtgccaatgttgtgttggccatttttttctgatcagccacttaatagcaacattatttgcgaagaatgggagattgggatgaagattgatg |
4504347 |
T |
|
| Q |
125 |
cgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaa |
224 |
Q |
| |
|
| |||||| |||| || ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| |
|
|
| T |
4504348 |
ccaatgtacagagagaagaggtagagaaacttattaatgaattgatggtgggagagaaaggaaagaagatgaggcaaaaggccatggagttgaagaagaa |
4504447 |
T |
|
| Q |
225 |
ggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
||| |||||| ||| |||| ||| ||||||||||| ||||||||||||||| |||| ||||| || ||||||||| |
|
|
| T |
4504448 |
ggcagaggaggacacaagacttggtggttgttcatacatgaacttggacaaagtgattaaggacgtcttgcttaaa |
4504523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 22 - 317
Target Start/End: Complemental strand, 4579716 - 4579421
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| || |||||| ||| || ||| ||| | | | |||| |||| | ||||| || ||||| | |
|
|
| T |
4579716 |
atatctgctggagttccaatgttgtgttggccatttttcgctgatcacccagtaagctgcagatatttatgcaatacatggaaaattggaattgaaatcg |
4579617 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| ||||| ||||| |||||||||||||| || || ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
4579616 |
acactaatgtgaagagagaggaggtggagaagctggttaatgaattgatggtgggagagaaagcaaagaagatgaggcaaaaggcaattgagttgaagaa |
4579517 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaagt |
317 |
Q |
| |
|
||||| ||||||| ||||||||||||||| |||||||| ||||||||||| ||| |||| ||||||||||| || ||| |||||| || |||||| |
|
|
| T |
4579516 |
gaaggtggaggaggacacgagacctggaggctgttcatacatgaacttggagaaagtgattaaggaggtgttactcaaacaaaatcgaacttaagt |
4579421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 22 - 300
Target Start/End: Original strand, 4267014 - 4267292
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||||||||||| | ||||| |
|
|
| T |
4267014 |
atatgtgctggagtgccaatgttgtgttggccattctttggtgatcagccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatca |
4267113 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||| ||||| || || || ||||| | |||||||||||||||||||||||||||||||| | ||||| | |||| | | |||||||||| |
|
|
| T |
4267114 |
atacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaaaggaaatatgatgaagcaaaatgtcttggagttgaagag |
4267213 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
|||||| || |||| ||| |||||||| |||| |||||| ||||||||||||||| | || |||||||| |||||||| |
|
|
| T |
4267214 |
gaaggcagaagagaacacaagacctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaa |
4267292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 4493239 - 4492955
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||| ||||||||| | ||||| | |
|
|
| T |
4493239 |
atatgtgccggagtgccaatgttgtgttggcctttctttagtgatcagccaacaaactgtagattgatttgcaatgaattggagattggagtagaaatcg |
4493140 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| |||||| || || || | |||||||| || |||||||| | ||||| |||||||||||||| |||||||||| ||| || | |||||||| || |
|
|
| T |
4493139 |
ataggaatgttaatagagaaaatgtggagaatctggtcaatgagattatggttggagagaaaggaaacaagatgaggagaaaagccacggagttgaaaaa |
4493040 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
|||||| |||||| ||| |||||| ||||||||||| ||||||||||||||| |||||||||| || ||||||||| ||||| |
|
|
| T |
4493039 |
gaaggcagaggaggacacagtacctggtggttgttcatacatgaacttggacaaagtgatcaaggatgtcttgcttaaacaaaat |
4492955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 4602073 - 4601789
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||||||||| || |||||||||||||| || ||| ||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| | |
|
|
| T |
4602073 |
atatgtgctggagtgccgatgttgtgttggcctttttttgccgatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcg |
4601974 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||| ||||| |||||| ||| ||| || |||||||| |||| | ||||| ||||| |||||||||||| ||||||| || ||||||||||| |
|
|
| T |
4601973 |
atacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggcaagaagatgaggcaaaaggccatggagttgaagaa |
4601874 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
|| ||| |||||||||| |||| || ||||||||||| | |||| |||||||| | || |||||||||||||||||| ||||| |
|
|
| T |
4601873 |
gatggcaaaggagagcactagactaggtggttgttcatacaagaacctggacaaagttattaaggaggtgttgcttaaacaaaat |
4601789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 300
Target Start/End: Complemental strand, 4470087 - 4469809
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||| ||||||||| | |||| |||||| |||||| |||||||||||||||||| | ||||| | |
|
|
| T |
4470087 |
atatgcgctggagtgccaatgttgtgttggccattctttggtgatcagctagcaaattgtagatttatttgcaatgaatgggagattggacttgaaatcg |
4469988 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| |||| ||||| || ||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||| ||||| || ||||| ||||| |
|
|
| T |
4469987 |
ataaagatgtgaagagagatgaggtggagaagctagtcaatgaattgatggttggagagaatggaaagaagatgagggaaaagatcatggagttcaagaa |
4469888 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
||||| ||||||| || |||||||||||| |||||| | ||||||||||||| | || ||||| || ||||||||| |
|
|
| T |
4469887 |
gaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaagtcattaaggatgtcttgcttaaa |
4469809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 4506141 - 4505857
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||| |||||||| |||||| |||||||||| |||||| ||||||| ||||||||||||||| |||||| |||||||| ||||||||| || ||||||| |
|
|
| T |
4506141 |
atatgcgctggagtgccaatgctgtgttggccgttctttggtgatcaaccaacaaactgtagatttatttgcaatgaattggagattggaatcgaaattg |
4506042 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||| || || || | || ||||| || ||| ||||| | ||||| |||||||||||||| |||||||||||||||| || |||||||| || |
|
|
| T |
4506041 |
atactaatgtgaatagagaaaatgtagagaagctggtcgatgaaattatggttggagagaaaggaaacaagatgaggaaaaaggtcatggagttgaaaaa |
4505942 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
|| ||| ||||| || |||||||| |||||||||| ||||||||||||||| | || |||||||||||||||||| ||||| |
|
|
| T |
4505941 |
gagggcaaaggaggatacaagacctggtggttgttcattcatgaacttggacaaagttattaaggaggtgttgcttaaacaaaat |
4505857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 4598459 - 4598162
Alignment:
| Q |
18 |
aagtatatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
117 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| || || || ||||||| | | ||||| ||| ||||| |||||||||||||||||| || || |
|
|
| T |
4598459 |
aagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatcagcaagccaactgcagatatatttgcaatgaatgggagattggaatcaaa |
4598360 |
T |
|
| Q |
118 |
attggtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttga |
217 |
Q |
| |
|
|||| || ||||| ||||| |||||||||||||| || ||||| ||||||||| |||||| ||||||||||| |||||| ||||| |||| || |||| |
|
|
| T |
4598359 |
attgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaattgatgtcgggagataaaggaaagaaaatgaggcaaaagacaattgatttga |
4598260 |
T |
|
| Q |
218 |
agaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaa |
315 |
Q |
| |
|
||| ||||||||||||| ||||||| ||||||||||||||| |||||||| || ||| |||| ||||||||||| |||||| | ||||||| |||| |
|
|
| T |
4598259 |
agatgaaggcggaggaggaaacgagacttggaggttgttcatacatgaacttagagaaagtgattaaggaggtgtttcttaaacagaatcaaacttaa |
4598162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 4461407 - 4461123
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||| ||||||||||||| | ||||| | |
|
|
| T |
4461407 |
atatgtgctggagtgccgatgttgtgttggccattctttggtgatcagccagcaaactgtagatttatttgcaacaaatgggagattggacttgaaatcg |
4461308 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| |||| |||||||| ||||||||||| | ||||| ||||||||||| ||||||| ||||||||||||||| |||||| || || || ||||| |
|
|
| T |
4461307 |
ataaagatgtgaagagggatgaggtggagaagttggtcaacgaattgatggttggagagattggaaagaagatgaggcaaaaggtcatggaattcaagaa |
4461208 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
||||| ||||||| || |||||||||||| |||||| | ||||||||||||| | || ||||| || ||||||||| ||||| |
|
|
| T |
4461207 |
gaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaagtcattaaggatgtcttgcttaaacaaaat |
4461123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 22 - 300
Target Start/End: Complemental strand, 4626235 - 4625957
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||| ||||| |||||||||||||||||| |||||||| | |
|
|
| T |
4626235 |
atatgcgctggagttccaatgctgtgttggccaaattttgctgatcagccaacaaattgtagatatatttgcaatgaatgggagattggaatggaaatcg |
4626136 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
| | ||||| |||||||||| ||| |||||||| |||||| |||||||| ||||| || ||||||||||||||| ||||||| || ||||||||||| |
|
|
| T |
4626135 |
atgctaatgtgaagagggagggggtagagaaactgatcaatgcattgatggcaggagataacggaaagaagatgaggcaaaaggccatggagttgaagaa |
4626036 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
|||||| ||||||| || || || || ||||||||||| ||||| |||| ||| |||| || || || ||||||||| |
|
|
| T |
4626035 |
gaaggcagaggagaacattagtcccggtggttgttcatacatgaatatggataaactgattaatgatgtcttgcttaaa |
4625957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 300
Target Start/End: Complemental strand, 4622426 - 4622148
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||| ||| | |||| |||||||||||| || ||||| |
|
|
| T |
4622426 |
atatgtgctggagtttcaatgctgtgttggccatttttcgctgatcagccaacaaactgtagatatatctgcaattcatgggagattggaatcgaaatca |
4622327 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||| || || ||||||||| ||| || |||||||||||||| |||||| ||||||||||||||||| ||||||| || ||||||||| | |
|
|
| T |
4622326 |
atactaatgtgaaaagagaggaggtgtcgaatctgatcaatgaattgatgtcgggagataaaggaaagaagatgagacaaaaggccatggagttgaagga |
4622227 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
|||||| || |||| || || ||||| ||||||||||| | |||||||||||| | || |||||||| |||||||| |
|
|
| T |
4622226 |
gaaggcagatgagacgaccagccctggtggttgttcatacaacaacttggacaaagttattaaggaggtcatgcttaaa |
4622148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 25 - 300
Target Start/End: Original strand, 4256462 - 4256738
Alignment:
| Q |
25 |
tgtgctggagttccaatgttgtgttggccattctttagtgatcag-ccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattggt |
123 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||| | |||||||||||||| || ||||| | |
|
|
| T |
4256462 |
tgtgccggagttccaatgttgtgttggccattttttgctgatcagaccaacaaactgtagatttatttgtagcgaatgggagattggaattgaaatcaat |
4256561 |
T |
|
| Q |
124 |
acgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaaga |
223 |
Q |
| |
|
|| ||||| ||||| || ||||||||||| || |||||||||||||| |||||| |||||||||||||||||| |||||| || || |||||||||| |
|
|
| T |
4256562 |
actaatgtgaagagagatgaggtggagaatctgatcaatgaattgatgtcgggagaaaaaggaaagaagatgaggcaaaaggtcatggaattgaagaaga |
4256661 |
T |
|
| Q |
224 |
aggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
|| | ||| ||| ||| || || | ||| ||||| ||||||||||||||| | || |||||||| |||||||| |
|
|
| T |
4256662 |
agacagagaagaacaccagcccagctggtcattcattgatgaacttggacaaagttattaaggaggtcatgcttaaa |
4256738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 4457878 - 4457715
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||| |||||||| |||||| || |||||||||||||| ||||| ||||||||| |||||| |||||| ||||||||| ||||||||||||||||| | |
|
|
| T |
4457878 |
atatgcgctggagtgccaatgctgcgttggccattctttggtgataagccaacaagttgtagatttatttgcaatgaatgagagattgggatggaaatcg |
4457779 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaagg |
185 |
Q |
| |
|
||| ||||| ||||| || ||||||||||| | ||||||||||||||||||||||| ||||| |
|
|
| T |
4457778 |
atacaaatgtgaagagagatgaggtggagaagttagtcaatgaattgatggtgggagaaaaagg |
4457715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 33 - 276
Target Start/End: Original strand, 4260013 - 4260256
Alignment:
| Q |
33 |
agttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattggtacgaatgta |
132 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| || |||||||||||||| || |||||| ||| ||||| |
|
|
| T |
4260013 |
agttccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaacgaatgggagattggaattgaaattaatactaatgtg |
4260112 |
T |
|
| Q |
133 |
aagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaaggcggagg |
232 |
Q |
| |
|
|| || || ||||||| ||| || |||||||| | ||| ||||| ||||||||||||||||| |||||| || |||||||||| |||||| |||| |
|
|
| T |
4260113 |
aaaagagatgaggtggcgaagctgatcaatgaaattatgtcaggagaagaaggaaagaagatgaggcaaaaggtcatggagttgaagaggaaggcagagg |
4260212 |
T |
|
| Q |
233 |
agagcacgagacctggaggttgttcatatatgaacttggacaaa |
276 |
Q |
| |
|
||| ||| || || |||| ||||| ||||||||||||||| |
|
|
| T |
4260213 |
agaacaccagtccatctggttattcattgatgaacttggacaaa |
4260256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 32 - 287
Target Start/End: Complemental strand, 4568330 - 4568072
Alignment:
| Q |
32 |
gagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattggtacgaatgt |
131 |
Q |
| |
|
|||| |||||||| |||||||| || ||| ||| ||||||||| |||| ||| ||||| ||| | | |||||| || || ||||||| ||| ||||| |
|
|
| T |
4568330 |
gagtaccaatgttatgttggccttttttttctgagcagccaacatactgcagatatatttgtaataagttggagatcggaatcgaaattgatacaaatgt |
4568231 |
T |
|
| Q |
132 |
aaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaag---gcg |
228 |
Q |
| |
|
||||| |||||||||||||| || | |||||||| ||||||||| |||||||||| ||||||||| ||||||| | ||||||||||||||| || |
|
|
| T |
4568230 |
gaagagagaggaggtggagaagctgatgaatgaattaatggtgggacagaaaggaaaaaagatgaggcaaaaggccgtggagttgaagaagaagaaggca |
4568131 |
T |
|
| Q |
229 |
gaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaagga |
287 |
Q |
| |
|
||| || ||| |||||||| | || |||||| ||||||||||||||| |||| ||||| |
|
|
| T |
4568130 |
gagaaggacacaagacctggtgattcttcatacatgaacttggacaaagtgattaagga |
4568072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 300
Target Start/End: Original strand, 4299671 - 4299866
Alignment:
| Q |
99 |
atgggagattgggatggaaattggtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgagg |
198 |
Q |
| |
|
|||||||||||| || ||||| | ||| ||||| | ||| ||||||||||| || || ||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
4299671 |
atgggagattggaatcgaaatcgatacaaatgtgaggagagaggaggtggaaaagctgatcaatgaattgatggtgggagagaaaggagataagatgaga |
4299770 |
T |
|
| Q |
199 |
aaaaaggcaatcgagttgaagaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgctta |
298 |
Q |
| |
|
||||||||| ||||| |||||| ||||||| ||| | || || |||||||| || ||||||||||||||| | || |||||||| |||||| |
|
|
| T |
4299771 |
caaaaggcaagggagtt------gaaggcagaggagaacactaatccaggtggttgttcgtacatgaacttggacaaagttattaaggaggttctgctta |
4299864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 4392048 - 4392152
Alignment:
| Q |
196 |
aggaaaaaggcaatcgagttgaagaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgc |
295 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||| ||| ||||||| |||| ||||| ||||||||||||||| |||| |||||||| |||| |
|
|
| T |
4392048 |
aggaaaaaggcgatcgagttgaagaagaaggcaaaggaggacacatgacctggtggttcttcattcatgaacttggacaaactgattaaggaggtcttgc |
4392147 |
T |
|
| Q |
296 |
ttaaa |
300 |
Q |
| |
|
||||| |
|
|
| T |
4392148 |
ttaaa |
4392152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 4606957 - 4607027
Alignment:
| Q |
240 |
gagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaa |
310 |
Q |
| |
|
|||||| || |||| |||||| ||||||||||| ||| |||| ||| |||| ||||||||| ||||||||| |
|
|
| T |
4606957 |
gagaccaggtggtttttcatacatgaacttggaaaaagtgattaagaaggttttgcttaaacaaaatcaaa |
4607027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 1674510 - 1674226
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| |
|
|
| T |
1674510 |
atatgcgctggagtgccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattg |
1674411 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||| || || |||||||| |
|
|
| T |
1674410 |
atacgaatgtgaagagagagggtttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaaggccatggaattgaagaa |
1674311 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
|||||| ||||||| ||| ||||| || ||||||||||| ||||||||||||||| |||| ||||| |||||||||||| ||||| |
|
|
| T |
1674310 |
gaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgcttaaacaaaat |
1674226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 22 - 317
Target Start/End: Original strand, 20863691 - 20863986
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| ||| ||||||||| |||||||| ||| |||| ||| |||||||||||||||| ||||||| |
|
|
| T |
20863691 |
atatgtgctggagtgccaatgttgtgctggccattttttgctgatcagccgacaaactgcagatacatttgcaacaaatgggagattgggatcgaaattg |
20863790 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| ||||| ||||| ||||||||||||| || || |||||||||||||||||||||||||||| || ||||||| ||||| ||| ||||||||||| |
|
|
| T |
20863791 |
acaccaatgtcaagagagaggaggtggagatgctggtaaatgaattgatggtgggagagaaaggaaggaggatgaggcaaaagacaaatgagttgaagaa |
20863890 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaagt |
317 |
Q |
| |
|
|||||| |||||| ||| ||||| | |||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||| |||||| |
|
|
| T |
20863891 |
gaaggcagaggaggacacaagaccggaaggtggttcatatatgaacttggacaaagtgattaaggaggtgttgcttaaacaaaatcaaacttaagt |
20863986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 18 - 337
Target Start/End: Original strand, 16686111 - 16686432
Alignment:
| Q |
18 |
aagtatatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
117 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| ||| |||||||||| |||| || ||| ||||| |||||||||||||||||| |||||| |
|
|
| T |
16686111 |
aagtatatatgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaaatgcagatatatttgcaatgaatgggagattggcatggaa |
16686210 |
T |
|
| Q |
118 |
attggtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttga |
217 |
Q |
| |
|
|||| || ||||| ||||| || |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| || || |
|
|
| T |
16686211 |
attgacaccaatgtgaagagagatgaggtggagaaattggtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaagataattgaactgc |
16686310 |
T |
|
| Q |
218 |
agaagaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaatcaaatttaagt |
317 |
Q |
| |
|
| | ||||| ||| || | |||||||||| ||||||||||| ||||||||||| ||| |||| | |||||| ||||||||| ||||||||| ||||| |
|
|
| T |
16686311 |
aaatgaaggtggacgaagacccgagacctggtggttgttcatacatgaacttggaaaaagtgattatggaggttttgcttaaacaaaatcaaacctaagt |
16686410 |
T |
|
| Q |
318 |
aa--ttttttatgcaaagcagt |
337 |
Q |
| |
|
| |||||||||||| ||||| |
|
|
| T |
16686411 |
gactttttttatgcaatgcagt |
16686432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 306
Target Start/End: Original strand, 27999947 - 28000231
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| |
|
|
| T |
27999947 |
atatgcgctggagtgccaatgttgtgttggtcattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattg |
28000046 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| |||||| |||| ||||| ||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||| || ||||||||||| |
|
|
| T |
28000047 |
atatgaatgtgaagatagaggatttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaaggccatggagttgaagaa |
28000146 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
||||| ||||||| ||| ||||| || ||||||||||| ||||||||||||||| |||| ||||| |||||| ||||| ||||| |
|
|
| T |
28000147 |
aaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgtttaaacaaaat |
28000231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 22 - 300
Target Start/End: Complemental strand, 24103283 - 24103005
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | |||||||||||||||| | ||||| | |
|
|
| T |
24103283 |
atatgtgctggagtgccaatgttgtgttggccattctttggtgatcaaccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatcg |
24103184 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||| ||||| || || || ||||| | |||||||||||||||||||||||||| ||||||| ||||| | |||||| | ||||| ||||| |
|
|
| T |
24103183 |
atacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaacggaaagacgatgaagcaaaaggtcttggagttcaagaa |
24103084 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
|||||| || |||| ||| ||| |||| |||| |||||| ||||||||||||||| | || |||||||| |||||||| |
|
|
| T |
24103083 |
gaaggcagaagagaacacaagatctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaa |
24103005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 22 - 300
Target Start/End: Original strand, 3567 - 3845
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||| |||||||| |||||| | ||||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||||||||||| | ||||| | |
|
|
| T |
3567 |
atatgcgctggagtaccaatgctttgttggccattctttggtgatcagccaacaaactgtagatttatttgcaacgaatgggagattggacttgaaatcg |
3666 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
|| | |||| ||||| || ||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||| ||||| |
|
|
| T |
3667 |
atatggatgtgaagagagatgaggtggagaagctagtcaatgaattgacggtgggagagaaaggaaagaagatgaggcaaaaggccgtggagttaaagaa |
3766 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
|||||| ||||||| ||| ||||| || ||| ||||||| |||||| |||||||| | || |||||||| ||||||||| |
|
|
| T |
3767 |
gaaggcagaggagaacactagaccaggtggtcgttcatacatgaacctggacaaagttattaaggaggttttgcttaaa |
3845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 1281398 - 1281114
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||| |||||| ||||||||| ||||||| |||||||| | |
|
|
| T |
1281398 |
atatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcg |
1281299 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||| ||||| |||||||||| || | ||||||||||||| | || || |||||||||| ||||| ||||||| || || |||||||| |
|
|
| T |
1281298 |
atacaaatgtgaagagagaggaggtggctaagttgatcaatgaattgatagccggggatgaaggaaagaatatgagagaaaaggccatggaattgaagaa |
1281199 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat |
306 |
Q |
| |
|
| ||||||||||| ||| ||||| || ||||||||||| |||||||| |||||| |||| ||||| ||||||||||| ||||| |
|
|
| T |
1281198 |
ggcggcggaggagaacactagaccgggtggttgttcatacatgaacttcgacaaagtgattaaggaaatgttgcttaaacaaaat |
1281114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 300
Target Start/End: Complemental strand, 3086699 - 3086426
Alignment:
| Q |
27 |
tgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattggtacg |
126 |
Q |
| |
|
||||||||| |||||||||||||||||||| | | | ||||| |||| |||||||||| ||| | |||| |||||||||||| || ||||| | ||| |
|
|
| T |
3086699 |
tgctggagtgccaatgttgtgttggccattttatggagatcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatact |
3086600 |
T |
|
| Q |
127 |
aatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaagg |
226 |
Q |
| |
|
||||| ||||| |||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||| |||| | ||||| |||||||| | |
|
|
| T |
3086599 |
aatgtgaagagagaggaggtcgagaagctgatcaatgaattgatggtgggagataaaggaaagaagatgaggcaaaatgtcgcagagttaaagaagaaag |
3086500 |
T |
|
| Q |
227 |
cggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
| || |||| ||| || || ||||||||||| ||||||||||||||| | || |||||||| ||||||||| |
|
|
| T |
3086499 |
cagaagagaacaccagtatcggtggttgttcatacatgaacttggacaaagttattaaggaggtcttgcttaaa |
3086426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 300
Target Start/End: Original strand, 4534 - 4812
Alignment:
| Q |
22 |
atatgtgctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattg |
121 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||| || |||||||||||||||| | | ||| | | || |||||||| ||| |||||||||| |
|
|
| T |
4534 |
atatgtgtaggagtgccaatgttgtgttggccatttttcgccgatcagccaacaaactatcggtatatctcccatatatgggagactggtatggaaattg |
4633 |
T |
|
| Q |
122 |
gtacgaatgtaaagagggaggaggtggagaaacttgtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaa |
221 |
Q |
| |
|
||| ||||| ||||| ||| |||| ||| | |||||||||||||| |||||| ||||||| |||||||||| ||||||| || ||||||||||| |
|
|
| T |
4634 |
atactaatgtgaagagagagaaggtaacgaatatgatcaatgaattgatgtcgggagataaaggaatgaagatgaggcaaaaggccatggagttgaagaa |
4733 |
T |
|
| Q |
222 |
gaaggcggaggagagcacgagacctggaggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaa |
300 |
Q |
| |
|
|||||| ||||||| ||| || |||| || |||||||| ||||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
4734 |
gaaggcagaggagaacaccagttctggtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaa |
4812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 3539 - 3668
Alignment:
| Q |
29 |
ctggagttccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattggtacgaa |
128 |
Q |
| |
|
|||||||||||||| || |||||||||| || || || |||||||||||||| |||| ||||||||||||||||| | ||||| | | | || |
|
|
| T |
3539 |
ctggagttccaatgctgcgttggccatttttccccgaacactcaacaaactgtagatgcatttggaatgaatgggagattggaagtgaaatagattccaa |
3638 |
T |
|
| Q |
129 |
tgtaaagagggaggaggtggagaaacttgt |
158 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |
|
|
| T |
3639 |
tgtgaagagagaggaggtggagaaacttgt |
3668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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