View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6400_high_16 (Length: 240)
Name: NF6400_high_16
Description: NF6400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6400_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 26423186 - 26423403
Alignment:
| Q |
5 |
aggaaaagggagaaaataacattcatacaaaccttttcttttctgttcgcttttaattatactatgtcagtagcattacacgaaataactcaatatatat |
104 |
Q |
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| T |
26423186 |
aggaaaagggagaaaataacattcatacaaaccttttcttttctgttcgcttttaattatactatgtcggtagcattacacgaagtaactcaatatatat |
26423285 |
T |
|
| Q |
105 |
aagggtaaactaattggcataacaacatttgaaagcatcagattctcaaaatatgttatgagtcttgcatatccaaataaaaatagtttacaaattacaa |
204 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26423286 |
aagggtaaactaattggcataacaacatttgaaagcaccagattctcaaaatatgttatgagtcttgcatatccaaataaaaatagtttacaaattacaa |
26423385 |
T |
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| Q |
205 |
accaacaaggaaaatact |
222 |
Q |
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|||||||||||||||||| |
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| T |
26423386 |
accaacaaggaaaatact |
26423403 |
T |
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