View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6400_low_9 (Length: 291)

Name: NF6400_low_9
Description: NF6400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6400_low_9
NF6400_low_9
[»] chr3 (13 HSPs)
chr3 (18-267)||(40496773-40497022)
chr3 (18-268)||(54014236-54014486)
chr3 (18-268)||(51545661-51545911)
chr3 (18-267)||(41346047-41346296)
chr3 (18-267)||(48169724-48169973)
chr3 (18-267)||(50676475-50676722)
chr3 (18-258)||(24709019-24709259)
chr3 (18-232)||(48737561-48737775)
chr3 (128-268)||(12568169-12568309)
chr3 (128-268)||(13544633-13544773)
chr3 (18-132)||(13542843-13542957)
chr3 (160-267)||(30459806-30459913)
chr3 (18-136)||(30462801-30462917)
[»] chr2 (25 HSPs)
chr2 (18-267)||(45080471-45080718)
chr2 (18-270)||(2110217-2110469)
chr2 (18-267)||(29193988-29194237)
chr2 (18-268)||(43370673-43370923)
chr2 (18-265)||(28585734-28585981)
chr2 (18-267)||(4828140-4828389)
chr2 (18-240)||(8381367-8381589)
chr2 (18-267)||(1779123-1779372)
chr2 (42-267)||(42846984-42847207)
chr2 (75-232)||(39646437-39646591)
chr2 (18-155)||(9370486-9370623)
chr2 (18-184)||(43377259-43377423)
chr2 (18-122)||(16970301-16970403)
chr2 (18-124)||(31921672-31921776)
chr2 (18-71)||(30422588-30422641)
chr2 (160-268)||(25898462-25898570)
chr2 (21-87)||(39646360-39646426)
chr2 (160-268)||(31922032-31922140)
chr2 (146-231)||(16964852-16964937)
chr2 (18-82)||(25898766-25898830)
chr2 (18-52)||(27922629-27922663)
chr2 (235-267)||(8381316-8381348)
chr2 (235-267)||(31921621-31921653)
chr2 (235-267)||(29194256-29194288)
chr2 (235-267)||(45080420-45080452)
[»] chr4 (26 HSPs)
chr4 (18-267)||(40071500-40071749)
chr4 (18-267)||(54438208-54438457)
chr4 (18-268)||(925187-925437)
chr4 (18-268)||(17493752-17494002)
chr4 (18-264)||(37064804-37065050)
chr4 (20-267)||(34408710-34408957)
chr4 (18-267)||(39787992-39788242)
chr4 (18-267)||(20789673-20789921)
chr4 (18-260)||(47199493-47199735)
chr4 (18-267)||(32217988-32218237)
chr4 (18-267)||(21240326-21240575)
chr4 (19-238)||(33800835-33801053)
chr4 (18-214)||(52101101-52101297)
chr4 (20-239)||(53509695-53509914)
chr4 (18-232)||(28910209-28910421)
chr4 (21-260)||(46870614-46870851)
chr4 (18-232)||(3172071-3172284)
chr4 (140-267)||(51744657-51744784)
chr4 (18-107)||(51744570-51744659)
chr4 (18-268)||(41555461-41555704)
chr4 (176-267)||(10441143-10441235)
chr4 (18-83)||(10441517-10441580)
chr4 (176-262)||(28690104-28690189)
chr4 (235-268)||(34408656-34408689)
chr4 (235-268)||(47199754-47199787)
chr4 (235-267)||(20789940-20789972)
[»] chr8 (15 HSPs)
chr8 (18-267)||(39906911-39907157)
chr8 (18-267)||(11254500-11254749)
chr8 (18-267)||(27820773-27821022)
chr8 (18-270)||(38069946-38070198)
chr8 (18-267)||(17493526-17493775)
chr8 (18-270)||(18575025-18575277)
chr8 (18-264)||(12738417-12738663)
chr8 (26-267)||(17336029-17336270)
chr8 (18-270)||(9753767-9754018)
chr8 (18-232)||(13243598-13243811)
chr8 (18-136)||(11147782-11147898)
chr8 (160-267)||(11146770-11146877)
chr8 (235-268)||(11254768-11254801)
chr8 (235-267)||(17493794-17493826)
chr8 (235-267)||(18575296-18575328)
[»] chr5 (12 HSPs)
chr5 (18-268)||(36982185-36982435)
chr5 (18-268)||(14044055-14044304)
chr5 (18-233)||(42897425-42897640)
chr5 (18-267)||(2970717-2970964)
chr5 (160-268)||(33403193-33403301)
chr5 (24-124)||(36767933-36768031)
chr5 (18-133)||(33404365-33404478)
chr5 (18-83)||(5712600-5712665)
chr5 (160-267)||(36768782-36768889)
chr5 (235-267)||(14044323-14044355)
chr5 (235-267)||(36982454-36982486)
chr5 (235-267)||(42897374-42897406)
[»] scaffold0519 (2 HSPs)
scaffold0519 (18-267)||(10644-10893)
scaffold0519 (235-268)||(10592-10625)
[»] chr7 (18 HSPs)
chr7 (18-267)||(29737405-29737654)
chr7 (18-267)||(40232166-40232415)
chr7 (18-267)||(6392271-6392520)
chr7 (18-267)||(27596137-27596385)
chr7 (18-268)||(4040946-4041196)
chr7 (21-267)||(41427702-41427948)
chr7 (18-265)||(25943698-25943943)
chr7 (18-267)||(31689404-31689653)
chr7 (18-268)||(38276596-38276846)
chr7 (18-268)||(24300205-24300445)
chr7 (18-267)||(21442851-21443098)
chr7 (29-232)||(48838095-48838296)
chr7 (18-111)||(22338126-22338217)
chr7 (18-136)||(22619883-22619999)
chr7 (160-267)||(22337710-22337818)
chr7 (160-267)||(22619524-22619631)
chr7 (235-267)||(25943649-25943681)
chr7 (235-267)||(40232115-40232147)
[»] chr1 (13 HSPs)
chr1 (18-268)||(46862555-46862805)
chr1 (18-267)||(38321645-38321894)
chr1 (18-267)||(39150948-39151197)
chr1 (18-267)||(1929268-1929516)
chr1 (18-267)||(32045833-32046082)
chr1 (18-267)||(28036751-28037001)
chr1 (18-268)||(46370926-46371170)
chr1 (18-267)||(50776997-50777246)
chr1 (18-267)||(8229063-8229313)
chr1 (18-268)||(1207503-1207751)
chr1 (18-268)||(40562487-40562735)
chr1 (21-244)||(9129455-9129679)
chr1 (96-264)||(38817777-38817945)
[»] chr6 (15 HSPs)
chr6 (18-267)||(28541638-28541887)
chr6 (18-267)||(29182591-29182840)
chr6 (18-268)||(12350271-12350521)
chr6 (18-267)||(1241109-1241357)
chr6 (21-267)||(13041972-13042217)
chr6 (18-267)||(30736419-30736668)
chr6 (18-267)||(16435779-16436024)
chr6 (18-271)||(7271129-7271383)
chr6 (18-232)||(31013546-31013760)
chr6 (19-232)||(1870569-1870780)
chr6 (18-215)||(13210396-13210590)
chr6 (18-124)||(31833642-31833743)
chr6 (149-258)||(31833747-31833856)
chr6 (235-270)||(16436043-16436078)
chr6 (235-267)||(1241376-1241408)
[»] scaffold0061 (1 HSPs)
scaffold0061 (18-267)||(10068-10317)
[»] scaffold0047 (1 HSPs)
scaffold0047 (18-267)||(69753-70002)
[»] scaffold0318 (2 HSPs)
scaffold0318 (63-267)||(16357-16561)
scaffold0318 (18-46)||(16565-16593)
[»] scaffold0532 (1 HSPs)
scaffold0532 (18-247)||(3834-4063)
[»] scaffold0016 (2 HSPs)
scaffold0016 (18-144)||(92220-92346)
scaffold0016 (221-268)||(92374-92421)
[»] scaffold1194 (1 HSPs)
scaffold1194 (23-232)||(1014-1212)


Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 40497022 - 40496773
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  40497022 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 40496923  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||     
T  40496922 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgtttagaaatctgagaaggtcaagtattgtg 40496823  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  40496822 ggacaaatattttttacaaataggtcacttattcaaggacggagggagta 40496773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 54014486 - 54014236
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  54014486 aagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaataattactttct 54014387  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  54014386 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 54014287  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  54014286 ggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 54014236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 51545911 - 51545661
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |    
T  51545911 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttttt 51545812  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  51545811 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 51545712  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  51545711 ggacaaatattttttacaaataggtcacttattcaggaacggagggagtaa 51545661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 41346296 - 41346047
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  41346296 aagaaaagtgtaaagatgaaagaaagtaagtgatacttttactgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattactttct 41346197  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  41346196 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 41346097  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  41346096 ggacaaatattttttacaaataggtcacttattcagggacggagggagta 41346047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 48169973 - 48169724
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  48169973 aagaaaagtgtaaagataaaagaaagagagtgatactattactgagctgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 48169874  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||| |     
T  48169873 ttgttccactacaaactttaacatggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatctgagaaggtcaagtattatg 48169774  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  48169773 ggacaaatattttttacaaataggtcacttattcagagacggagggagta 48169724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 50676722 - 50676475
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||| |||||    
T  50676722 aagaaaagtgtaaagataaaagaaagagagtgatatttttactgagttgcc-ttgtcattattttaaaactttttcacttttaagtaatgattactttct 50676624  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||     
T  50676623 ttgttccactacaaactttaacatggga-ccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctgagaaggtcaagtattgtg 50676525  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  50676524 ggacaaatattttttacaaataggtcacttattcagggacggagggagta 50676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 24709259 - 24709019
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  24709259 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaattttttcacttttaagtaatgattactttct 24709160  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    ||||| |  |||||||||||||||| | |||||||||| ||||||||| |  |||||||||||||||||| ||| ||||||||||||||||| ||||||     
T  24709159 ttgtttcactacaaactttaacatgaggaccacaaaaagtatttataaaggataaatctgtcaaattttgcttataaatctgagaaggtcaagtattgtg 24709060  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacg 258  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  24709059 ggacaaatattttttacaaataggtcacttattcagggacg 24709019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 48737775 - 48737561
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48737775 aagaaaagtgtagagatgaaagaaagaaaatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattattttct 48737676  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||| | |||||| ||||||||| || ||| |||||||| ||| |||| |||| ||    
T  48737675 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatttgtcaaattctgcttaaaaatctgaaaagatcaagtattata 48737576  T
Q  218 ggacaaatatttttt 232  Q
     ||||||||||||||    
T  48737575 agacaaatatttttt 48737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 128 - 268
Target Start/End: Original strand, 12568169 - 12568309
Alignment:
Q  128 acaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatat 227  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||    
T  12568169 acaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaagtcaagtattgtgggacaaatat 12568268  T
Q  228 tttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  12568269 tttttacaaatatgtcacttattcagggacggagggagtaa 12568309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 128 - 268
Target Start/End: Original strand, 13544633 - 13544773
Alignment:
Q  128 acaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatat 227  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||| ||||||||||    
T  13544633 acaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaagtcaagtattgtgggacaaatat 13544732  T
Q  228 tttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  13544733 tttttacaaatatgtcacttattcagggacggagggagtaa 13544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 13542843 - 13542957
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  13542843 aagaaaagtgtaaagatgaaagaaagagattgatacttttactgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattactttct 13542942  T
Q  118 ttgttccgttacaaa 132  Q
    ||||| || ||||||    
T  13542943 ttgtttcgctacaaa 13542957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 30459913 - 30459806
Alignment:
Q  160 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 259  Q
    |||||||| |||||  |||||||||||| ||  |||| |||||||||||| ||||   |||||| | ||||||| |||||| ||||||||||||||||||    
T  30459913 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtatttagggacaatttttttttacaaataggtcacttattcagggacgg 30459814  T
Q  260 agggagta 267  Q
    ||||||||    
T  30459813 agggagta 30459806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 30462917 - 30462801
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||| ||||||||||||||| ||| ||||| ||||||||| |||||||||| |||||||| ||||   ||||||||||| |||| |||| |||      
T  30462917 aagaaaagtataaagatgaaagaaatagagtgatatttttactgaattgcccttattattatttttaaac--cttcacttttaaataataattactttaa 30462820  T
Q  118 ttgttccgttacaaacttt 136  Q
    |||||||  ||||||||||    
T  30462819 ttgttccactacaaacttt 30462801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 45080471 - 45080718
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45080471 aagaaaagtgtaaagatgaaagaaagag--tgatacttttactgagttgcccttatcattatgttgaaactttttcacttttaagtaatgattattttct 45080568  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  45080569 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 45080668  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  45080669 ggacaaatattttttacaaataggtcacttattcagggacggagggagta 45080718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 2110469 - 2110217
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |    
T  2110469 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattacttttt 2110370  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||||||     
T  2110369 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtg 2110270  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaaca 270  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  2110269 ggacaaatattttttacaaataggtcacttattcagggacggagggagtaaca 2110217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 29194237 - 29193988
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29194237 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttct 29194138  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  ||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  29194137 ttgttccactacaaactttaacatcgggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 29194038  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    ||||| || ||||||| |||||| ||||||||||||||||||||||||||    
T  29194037 ggacacattttttttacaaataggtcacttattcagggacggagggagta 29193988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 43370923 - 43370673
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  43370923 aagaaaagtgtaaaaataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 43370824  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||     
T  43370823 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattgtg 43370724  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  43370723 ggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 43370673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 28585734 - 28585981
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  28585734 aagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 28585833  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||| || ||||||     
T  28585834 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgagaaggttaagtattgtg 28585933  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggag 265  Q
    ||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  28585934 ggataaatattttttacaaataggtcacttattcagggacggagggag 28585981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 4828140 - 4828389
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  4828140 aagaaaagtgtaaagataaaagaaaaagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 4828239  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  || ||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||| |||||||| |||||||||||||||||||     
T  4828240 ttgttccactataaactttaacatggggaccacaaaaagtatttataaggggtaaatttgtcaaattttgcttagaaatttgagaaggtcaaatattgtg 4828339  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||||    
T  4828340 ggacaaatattttttacaaatatgtcacttattgagggacggagggagta 4828389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 8381367 - 8381589
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||    
T  8381367 aagaaaaatgtaaagatgaaagaaatagagtgatacttttactgagttgcccttgtcattattttgaaactttttcatttttaagtaatgattactttct 8381466  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||| |||||||||   |||||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||| ||     
T  8381467 ttgttccactacaaattttaacatgaagaccacaaaaagtatttataaggggtaaatctgtcaaattttatttagaaatttgagaaggtcaagtatcgtg 8381566  T
Q  218 ggacaaatattttttataaatag 240  Q
    |||||||||||||||| ||||||    
T  8381567 ggacaaatattttttacaaatag 8381589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 1779123 - 1779372
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| ||| | || ||||||||||||||||||||||||||||||||||||||| |||||    
T  1779123 aagaaaagtgtaaagatgaaagaaagataatgatatttttactgaattgtctttgtcattattttgaaactttttcacttttaagtaatgattactttct 1779222  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    || ||||  |||||||||||||||||| |||||||||| ||||||||| | |||||||||| ||||| || |||||||||||||||| |||   |||||     
T  1779223 ttattccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatctgttaaattctgcttagaaatctgagaagatcaggcattgtg 1779322  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    ||||||||||||| | | ||||| |||  |||| ||||||||||||||||    
T  1779323 ggacaaatattttcttttaataggtcaagtattgagggacggagggagta 1779372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 42 - 267
Target Start/End: Original strand, 42846984 - 42847207
Alignment:
Q  42 agagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacat 141  Q
    ||||||||||| ||||||| | ||| |||| | ||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  42846984 agagaatgatatttttactaaattgtccttgttattattttgaaa--tcttcacttttaagtaatgattattttctttgttccattacaaacttttacat 42847081  T
Q  142 gggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaataga 241  Q
    ||  | |||||||| ||||||||||| |||||| ||||||||| || ||| |||||||| |||||||| |||| | |||||||||||||||  ||||||     
T  42847082 ggagaacacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgaaaaggtcaagtattatgggacaaatatttttttcaaatagg 42847181  T
Q  242 tcacttattcagggacggagggagta 267  Q
    |||  |||| | ||||||||| ||||    
T  42847182 tcaaatattaaaggacggaggtagta 42847207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 232
Target Start/End: Original strand, 39646437 - 39646591
Alignment:
Q  75 attattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaat 174  Q
    ||||||||||||| ||  ||||||||||||||||||| ||| ||||||||  |||||||||| ||||| | |||||||||| ||||||||||| ||||||    
T  39646437 attattttgaaacctt--cacttttaagtaatgattacttt-tttgttccactacaaacttttacatgaggaccacaaaaagtatttataaggggtaaat 39646533  T
Q  175 ctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatatttttt 232  Q
     ||||||||| | |||||||||||||||| |||||||||||| |||||||||||||||    
T  39646534 ttgtcaaattctatttagaaatctgagaatgtcaaatattgtgggacaaatatttttt 39646591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 9370623 - 9370486
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  9370623 aagaaaagtgtaaagatgaaaaaaagaaaatgatttttttactgaattgtccttgtcattattttgaaactttttcacttttaagtaatgattactttct 9370524  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaa 155  Q
    ||||| |  |||||||||||| ||||| | ||||||||    
T  9370523 ttgtttcactacaaactttaatatggggatcacaaaaa 9370486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 43377259 - 43377423
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||  ||| | |||||||||||||   ||||||||||||||||||||| |||||    
T  43377259 aagaaaagtgtaaagatgaaagaaagaaaatgatacttttactgaattgtacttgttattattttgaaac--cttcacttttaagtaatgattactttct 43377356  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaatt 184  Q
    |||||||  |||||||||| || |||  || ||||||| ||||||||||   ||||| |||||||||    
T  43377357 ttgttccactacaaacttttacttggagactacaaaaagtatttataagagataaatttgtcaaatt 43377423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 16970403 - 16970301
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||| |||||||| ||||   ||||||||||||||||||||| |||||    
T  16970403 aagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgcccttattattatttttaaac--cttcacttttaagtaatgattactttct 16970306  T
Q  118 ttgtt 122  Q
    |||||    
T  16970305 ttgtt 16970301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 31921672 - 31921776
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||| |||||||| ||||   ||||||||||| |||| |||| |||      
T  31921672 aagaaaagtgtaaagatgaaagaaagagagtgatatttttactaaattgcccttattattatttttaaac--cttcacttttaaataataattactttaa 31921769  T
Q  118 ttgttcc 124  Q
    |||||||    
T  31921770 ttgttcc 31921776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 30422641 - 30422588
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgccctt 71  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  30422641 aagaaaagtgtaacgatgaaagaaagagagtgatacttttactgagttgccctt 30422588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 268
Target Start/End: Complemental strand, 25898570 - 25898462
Alignment:
Q  160 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 259  Q
    ||||||||||||||  | |||||||||| ||  |||| |||||||||| | |||| | ||| || | ||||||| |||||| ||||||||||||||||||    
T  25898570 ttataaggagtaaaattatcaaattttgctttaaaatttgagaaggtcgagtattttgggataatttttttttacaaataggtcacttattcagggacgg 25898471  T
Q  260 agggagtaa 268  Q
    |||||||||    
T  25898470 agggagtaa 25898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 39646360 - 39646426
Alignment:
Q  21 aaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaac 87  Q
    |||| |||||| |||||||||||||||||||| ||||||||| |||||||| | |||||||||||||    
T  39646360 aaaaatgtaaaaatgaaagaaagagaatgatatttttactgaattgcccttgttattattttgaaac 39646426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 268
Target Start/End: Original strand, 31922032 - 31922140
Alignment:
Q  160 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 259  Q
    |||||||| |||||  |||||||||||| ||  |||| |||||||||||| |||| | |||||| | ||||||| |||||  ||||||||| ||||||||    
T  31922032 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtattttgggacaatttttttttacaaatatgtcacttatttagggacgg 31922131  T
Q  260 agggagtaa 268  Q
    || ||||||    
T  31922132 agagagtaa 31922140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 16964937 - 16964852
Alignment:
Q  146 accacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttt 231  Q
    |||||||||| ||||||||||| |||||  |||||||||||  ||| |||| |||||||||||| |||||| |||| ||| |||||    
T  16964937 accacaaaaagtatttataaggggtaaacttgtcaaattttacttaaaaatttgagaaggtcaagtattgtgggacgaattttttt 16964852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 25898830 - 25898766
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattatttt 82  Q
    ||||| ||||||||||||||||||| | | ||||| ||||||||| |||||||||| ||||||||    
T  25898830 aagaagagtgtaaagatgaaagaaaaaaagtgatatttttactgaattgcccttattattatttt 25898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 27922629 - 27922663
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgata 52  Q
    |||||||||||||||||||||||||||||||||||    
T  27922629 aagaaaagtgtaaagatgaaagaaagagaatgata 27922663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 8381348 - 8381316
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||||||||||||||||||||    
T  8381348 aaatagatcacttattcagggacggagggagta 8381316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 31921653 - 31921621
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||||||||||||||||||||    
T  31921653 aaatagatcacttattcagggacggagggagta 31921621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 29194256 - 29194288
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||| ||||||||||||||||||||||||||    
T  29194256 aaataggtcacttattcagggacggagggagta 29194288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 45080452 - 45080420
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||| ||||||||||||||||||||||||||    
T  45080452 aaataggtcacttattcagggacggagggagta 45080420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 40071500 - 40071749
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||    
T  40071500 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagcaatgattactttct 40071599  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  40071600 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 40071699  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  40071700 ggacaaatattttttacaaataggtcacttattcagggacggagggagta 40071749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 54438208 - 54438457
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  54438208 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattactttct 54438307  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||     
T  54438308 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaagtattgtg 54438407  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  54438408 ggacaaatattttttacaaataggtcacttattcagggacggagggagta 54438457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 925187 - 925437
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  925187 aagaaaagtgtaaagataaaagaaataaagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 925286  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  925287 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgta 925386  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    ||| |||||||||||| |||||| |||||||||||||||||| ||||||||    
T  925387 ggataaatattttttacaaataggtcacttattcagggacggtgggagtaa 925437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 17494002 - 17493752
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  17494002 aagaaaagtgtaaagatgaaagaaagagagtgatacttttattgagttgcccttgtcattattttgaaactttttcacttttaagtaataattattttct 17493903  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||     
T  17493902 ttgttccactacaaactttaacatggggaccacaaaaagtttttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaagtattgtg 17493803  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
     ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17493802 agacaaatattttttacaaataggtcacttattcagggacggagggagtaa 17493752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 18 - 264
Target Start/End: Original strand, 37064804 - 37065050
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  37064804 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcatttttttgaaactttttcacttttaagtaatgattactttct 37064903  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||| | |||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||||     
T  37064904 ttgttccactacaaactttaacatgaggaccacaaaaagtatttataaggggtaaatatgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 37065003  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggaggga 264  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||    
T  37065004 ggacaaatattttttacaaataagtcacttattcagggacggaggga 37065050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 34408710 - 34408957
Alignment:
Q  20 gaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttcttt 119  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34408710 gaaaagtgtaaagatgaaagaaagagaatgatacttttattgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttcttt 34408809  T
Q  120 gttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtagg 219  Q
    |||    |||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||| | ||    
T  34408810 gttatactacaaactttaacatgtggaccacaaaaagtatttataaggggtaaatctgtcaaattttacctagaaatctgagaaggtcaagtattatggg 34408909  T
Q  220 acaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34408910 acaaatattttttacaaataggtcacttattcagggacggagggagta 34408957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 39788242 - 39787992
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  39788242 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 39788143  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||||||     
T  39788142 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtg 39788043  T
Q  218 ggacaaatatt-ttttataaatagatcacttattcagggacggagggagta 267  Q
    | ||||||||| ||||| |||||| ||||||||| || |||||||||||||    
T  39788042 gaacaaatatttttttacaaataggtcacttatttagagacggagggagta 39787992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 20789921 - 20789673
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  20789921 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagctgcc-ttgtcattattttgaaactttttcacttttaagtaatgattattttct 20789823  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||  |||||||||||||||| |||| |||| |     
T  20789822 ttgttccactacaaactttaacatggggaccacaaaaagtatttataagggataaatctgtcaaattttacttagaaatctgagaagatcaagtattatg 20789723  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||||||| |||||||||||||||| |||||    
T  20789722 ggacaaatattttttacaaatagatcatttattcagggacggagagagta 20789673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 47199735 - 47199493
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  47199735 aagaaaagtgtaaagatgaaagaaagagagtgatatttttattgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattattttct 47199636  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| |||||||| || |||||||||| ||||||||  |||||||||||||||||||| ||||||     
T  47199635 ttgttccactacaaactttaacatggggaccacaaaaagtatttatatggggtaaatctgttaaattttgcctagaaatctgagaaggtcaagtattgtg 47199536  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacgga 260  Q
    |||||||||||||||| |||||| ||||||||||| |||||||    
T  47199535 ggacaaatattttttacaaataggtcacttattcacggacgga 47199493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 32217988 - 32218237
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||| | | |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  32217988 aagaagagtgtaaagatgaaagaaagagaattatatttttactgaatagtccttgtcattattttgaaactttttcacttttaagtaatgattactttct 32218087  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||| |||||||||||  |||| |||| ||    
T  32218088 ttgttccactacaaactttaacatgggaaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttaaaaatctgagaaaatcaagtattata 32218187  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||  |||||| | |  |||| |||||||||| |||||    
T  32218188 ggacaaatatttttttcaaataggtgaagtattgagggacggagagagta 32218237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 21240575 - 21240326
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||| | || ||| |||||||||||||||||| |||||||||||||||| |||||    
T  21240575 aagaaaagtgtagagatgaaagaaagagaatgatatttttactgaattgacattgtcactattttgaaactttttcatttttaagtaatgattactttct 21240476  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| |||||||| || |||||||||||||||| |  |||||| |||||||||||||| |||| |     
T  21240475 ttgttccactacaaactttaacatggggaccacaaaaagtatttatatggggtaaatctgtcaaattctacttagaagtctgagaaggtcaagtattatg 21240376  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||  |||||| |||  |||| ||||||||||||||||    
T  21240375 ggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 21240326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 19 - 238
Target Start/End: Original strand, 33800835 - 33801053
Alignment:
Q  19 agaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctt 118  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||| ||||||    
T  33800835 agaaaagtgtaaagatggaagaaagagagtgatacttttactgagttgcccttgtcatcattttgaaactttttcacttttaaataatgattactttctt 33800934  T
Q  119 tgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtag 218  Q
    ||||||  |||||||||||| ||||| ||||| |||| ||||||||||  ||||||||||||||||||  ||||||||||||||||||||| |||| |||    
T  33800935 tgttccactacaaactttaatatggggaccac-aaaagtatttataagaggtaaatctgtcaaattttacttagaaatctgagaaggtcaagtattatag 33801033  T
Q  219 gacaaatattttttataaat 238  Q
     |||||||||||||| ||||    
T  33801034 aacaaatattttttacaaat 33801053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 52101297 - 52101101
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||| |||| ||| |||||||||||||| |||||||||||||||||||| |||||||||    
T  52101297 aagaaaagtgtaaagatgaaagaaatataatgatatttttactgaattgcacttgtcattattttgaaattttttcacttttaagtaatggttattttct 52101198  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatatt 214  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  52101197 ttgttccactacaaactttaacatgggaaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttataaatctgagaaggtcgaatatt 52101101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 53509695 - 53509914
Alignment:
Q  20 gaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttcttt 119  Q
    ||||||||||||||||||||||| ||||||||| | ||||||| ||| | || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  53509695 gaaaagtgtaaagatgaaagaaaaagaatgatattgttactgaattgtcattgtcattattttgaaactttttcacttttaaataatgattattttcttt 53509794  T
Q  120 gttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtagg 219  Q
    |||||  |||||| ||||||||||| | |||||||| |||||||||||| ||||| ||||||||| |  |||||||||||| ||||||||||||||| |     
T  53509795 gttccactacaaattttaacatggggatcacaaaaagtatttataaggaataaatatgtcaaattctccttagaaatctgataaggtcaaatattgtgga 53509894  T
Q  220 acaaatattttttataaata 239  Q
    ||||||||||||| ||||||    
T  53509895 acaaatattttttctaaata 53509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 28910209 - 28910421
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||| || |||||||||||||||||||||||| ||||||||| ||| |||| | ||||||||||||| ||  ||||||||||||||||||| |||||    
T  28910209 aagaaaaatgcaaagatgaaagaaagagaatgatatttttactgaattgtccttgttattattttgaaacctt--cacttttaagtaatgattactttct 28910306  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  || ||||||| |||||| ||||||||||| ||||||||||| |||||| ||||||||| || ||| |||||||||||||| ||||| ||||    
T  28910307 ttgttccactagaaacttttacatggaaaccacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaggttaaatactgta 28910406  T
Q  218 ggacaaatatttttt 232  Q
    | |||||||||||||    
T  28910407 gaacaaatatttttt 28910421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 46870851 - 46870614
Alignment:
Q  21 aaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttg 120  Q
    ||||||| || ||||||||||||||||||||| ||||||||| | | |||| | ||||||||||||| ||  ||||||||||||||||| | ||||||||    
T  46870851 aaaagtgcaaggatgaaagaaagagaatgatatttttactgaatagtccttgttattattttgaaacctt--cacttttaagtaatgatgactttctttg 46870754  T
Q  121 ttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtagga 220  Q
    ||||  |||||||||| ||||||| |||||||||| |||||||||||  ||||| ||||||||| |  ||| ||||||||| ||||||| |||||| |||    
T  46870753 ttccactacaaacttttacatggggaccacaaaaagtatttataagggataaatttgtcaaattgtacttaaaaatctgagcaggtcaagtattgtggga 46870654  T
Q  221 caaatattttttataaatagatcacttattcagggacgga 260  Q
    |||||||||||| ||||||| |||  |||| |||||||||    
T  46870653 caaatattttttctaaataggtcaagtattgagggacgga 46870614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 3172071 - 3172284
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatca-ttattttgaaactttttcacttttaagtaatgattattttc 116  Q
    ||||||| ||||||||||||| ||||| ||||||| ||||||||| ||| |||| | | |||||||||||| ||  ||||||||||||||||||| ||||    
T  3172071 aagaaaaatgtaaagatgaaaaaaagataatgatatttttactgaattgtccttgttaattattttgaaacctt--cacttttaagtaatgattactttc 3172168  T
Q  117 tttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgt 216  Q
    ||||||||  |||||||||| |||| |  |||||||||| |||||||||   |||||| ||||||||| || |||||||| |||||| ||||| ||||||    
T  3172169 tttgttccactacaaacttttacattgagaccacaaaaagtatttataaaaggtaaatttgtcaaattctgcttagaaatttgagaaagtcaagtattgt 3172268  T
Q  217 aggacaaatatttttt 232  Q
     |||||||||||||||    
T  3172269 gggacaaatatttttt 3172284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 140 - 267
Target Start/End: Original strand, 51744657 - 51744784
Alignment:
Q  140 atgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaata 239  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||| |||||    
T  51744657 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaata 51744756  T
Q  240 gatcacttattcagggacggagggagta 267  Q
    | ||||||||| ||||||||||||||||    
T  51744757 ggtcacttatttagggacggagggagta 51744784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 51744570 - 51744659
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatg 107  Q
    ||||||||||||||||||  ||||||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  51744570 aagaaaagtgtaaagatgtgagaaagagagtgatacttttactaagttgcccttgtcattattttgaaacttgttcacttttaagtaatg 51744659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 41555704 - 41555461
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||||||||||||||    |||||||| ||||||||| ||| | ||||   |||||| |||| ||  |  |||||||||||||||| |||||    
T  41555704 aagaaaagtgtaaagatgaaaga----gaatgatatttttactgaattgtcattat---tatttttaaaccttcacttttttaagtaatgattactttct 41555612  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    ||||| |  |||||||||| |||| |  |||||||||| ||  ||||||| |||||  |||||||||  | ||| |||| |||||||||||| |||||      
T  41555611 ttgtttcactacaaacttttacatagagaccacaaaaagtaactataaggggtaaacttgtcaaattaagcttaaaaatttgagaaggtcaattattgcg 41555512  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||| ||||||  |||||| |||  ||||  ||||||||||||||||    
T  41555511 ggacaaattttttttccaaataggtcaagtattgcgggacggagggagtaa 41555461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 10441235 - 10441143
Alignment:
Q  176 tgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatatttttt-ataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||| ||  |||| |||||||||||| |||| | |||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  10441235 tgtcaaattttgctttaaaatttgagaaggtcaagtattttgggacaaatttttttttacaaataggtcacttattcagggacggagggagta 10441143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 10441580 - 10441517
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttg 83  Q
    |||| |||||||||||| ||||||||||  ||||| ||||||||| |||||||||| |||||||||    
T  10441580 aagataagtgtaaagataaaagaaagag--tgatatttttactgaattgcccttattattattttg 10441517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 28690104 - 28690189
Alignment:
Q  176 tgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagg 262  Q
    |||||||||||| ||  |||| ||||||||||||||||| |  ||| ||| ||||||| |||||  ||| |||||||||||||||||    
T  28690104 tgtcaaattttgctttaaaatttgagaaggtcaaatattttgcgac-aattttttttacaaatatgtcagttattcagggacggagg 28690189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Complemental strand, 34408689 - 34408656
Alignment:
Q  235 aaatagatcacttattcagggacggagggagtaa 268  Q
    |||||| |||||||||||||||||||||||||||    
T  34408689 aaataggtcacttattcagggacggagggagtaa 34408656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Original strand, 47199754 - 47199787
Alignment:
Q  235 aaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||||||| |||||||||||||    
T  47199754 aaatagatcacttattcaggtacggagggagtaa 47199787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 20789940 - 20789972
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||||||| ||||||||||||    
T  20789940 aaatagatcacttattcaggaacggagggagta 20789972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 39907157 - 39906911
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  39907157 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttatcattattttgaaattttttcacttttaagtaatgattactttct 39907058  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  39907057 ttgttccactacaaactttaacatgg--accacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 39906960  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  39906959 ggacaaata-tttttataaatagatcacttattcagggacggaggaagta 39906911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 11254749 - 11254500
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11254749 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttct 11254650  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||| |||||||||||| |||||||| ||||||     
T  11254649 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtg 11254550  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||| | ||||||| |||||| ||||||||||||||||||||||||||    
T  11254549 ggacaatttttttttacaaataggtcacttattcagggacggagggagta 11254500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 27821022 - 27820773
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  27821022 aagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 27820923  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  27820922 ttgttccactacaaattttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 27820823  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  27820822 ggacaaatattttttacaaataggtcacttattcagggacagagggagta 27820773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 270
Target Start/End: Original strand, 38069946 - 38070198
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  38069946 aagaaaagtgtaaagatgaaagaaagatagtgatacttttactgagttgcccttgtcattattttgaaactttttcatttttaagtaatgattattttct 38070045  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||| | |||||||||||||||||||  |||||||||||||||||||| ||||||     
T  38070046 ttgttccactacaaactttaacatggggaccacaaaaagtatttataatgggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtg 38070145  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaaca 270  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  38070146 ggacaaatattttttacaaataggtcacttattcagggacagagggagtaaca 38070198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 17493775 - 17493526
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |    
T  17493775 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactaagttgcccttgtcattattttgaaactttttcatttttaagtaatgattactttat 17493676  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||     
T  17493675 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgtttagaaatctgagaagatcaagtattgtg 17493576  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  17493575 ggacaaatattttttacaaataggtcacttattcagggacggaggaagta 17493526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 18575277 - 18575025
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18575277 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttct 18575178  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||   ||||| |||||||||||| ||||||||||||||||||| | ||||||     
T  18575177 ttgttccactacaaactttaacatggggaccacaaaaagtatttataagagataaatttgtcaaattttgcttagaaatctgagaaggtcgagtattgtg 18575078  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaaca 270  Q
    |||||| | ||||||| |||||| |||||||||||||||||||||||||||||    
T  18575077 ggacaatttttttttacaaataggtcacttattcagggacggagggagtaaca 18575025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 264
Target Start/End: Original strand, 12738417 - 12738663
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  12738417 aagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 12738516  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| | |||||||| ||||||||||| |||||| ||||||||| || |||||||||||| |||||||| |||| |     
T  12738517 ttgttccactacaaactttaacatggggatcacaaaaaatatttataaggggtaaatttgtcaaattctgcttagaaatctgataaggtcaagtattatg 12738616  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggaggga 264  Q
    |||||||||||||||  ||||||||||  |||| || ||||||||||    
T  12738617 ggacaaatattttttccaaatagatcaagtattgagagacggaggga 12738663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 267
Target Start/End: Original strand, 17336029 - 17336270
Alignment:
Q  26 tgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttgttccg 125  Q
    ||||||||||||||||||||||||||| |||||||||  || |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||     
T  17336029 tgtaaagatgaaagaaagagaatgatatttttactgaactgtccttgtcattattttgaaactttttcacttttaagtaatgattactttcgttgttcca 17336128  T
Q  126 ttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaat 225  Q
     || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || |||||||||| |||||||||| |||| | ||||||||    
T  17336129 ctagaaactttaacatgggaaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatctaagaaggtcaagtattatgggacaaat 17336228  T
Q  226 attttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||  |||||| |||  |||| || |||||||||||||    
T  17336229 attttttcaaaataggtcaagtattgagagacggagggagta 17336270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 9754018 - 9753767
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatca-ttattttgaaactttttcacttttaagtaatgattattttc 116  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| ||| |||| | | |||||||||||| ||  ||||||||||||||||||| ||||    
T  9754018 aagaaaagtgtaaagatgaaagaaagataatgatatttttactgaattgtccttgttaattattttgaaacctt--cacttttaagtaatgattactttc 9753921  T
Q  117 tttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgt 216  Q
    |||||| |  |||||||||| |||| |  |||||||||| ||||||||||  |||||| ||||||||| || |||||||| |||||||||||| |||| |    
T  9753920 tttgtttcactacaaacttttacattgagaccacaaaaaatatttataagaggtaaatttgtcaaattctgcttagaaatttgagaaggtcaagtattat 9753821  T
Q  217 aggacaaatattttttataaatagatcacttattcagggacggagggagtaaca 270  Q
     ||||||||||||||| ||||||| |||  |||| |||||||||||||||||||    
T  9753820 gggacaaatattttttttaaataggtcaagtattgagggacggagggagtaaca 9753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 13243598 - 13243811
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatca-ttattttgaaactttttcacttttaagtaatgattattttc 116  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||| ||| |||| | | |||||||||||| ||  || |||||||||||||||||||||    
T  13243598 aagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgtccttgttaattattttgaaacctt--catttttaagtaatgattattttc 13243695  T
Q  117 tttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgt 216  Q
    ||||||||  |||||||||| |||| |  |||||||||| ||||||||||| || ||| ||||||||| || |||||||| |||||||||||||||||||    
T  13243696 tttgttccactacaaacttttacattgagaccacaaaaagtatttataaggggtgaatttgtcaaattctgcttagaaatttgagaaggtcaaatattgt 13243795  T
Q  217 aggacaaatatttttt 232  Q
      |||| |||||||||    
T  13243796 gagacatatatttttt 13243811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 11147898 - 11147782
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||| ||||   ||||||||||| |||| |||| |||      
T  11147898 aagaaaagtgtaaagatgaaaggaagagaatgatatttttactgaattgcccttattattatttttaaac--cttcacttttaaataataattactttaa 11147801  T
Q  118 ttgttccgttacaaacttt 136  Q
    |||||||  ||||||||||    
T  11147800 ttgttccactacaaacttt 11147782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 11146877 - 11146770
Alignment:
Q  160 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 259  Q
    ||||||||||||||  |||||||||||||||  |||| ||| |||||||| |||| |   |||| | ||||||| |||||||||||||||||| ||||||    
T  11146877 ttataaggagtaaaattgtcaaattttgttttaaaatttgataaggtcaagtattttgaaacaatttttttttacaaatagatcacttattcaaggacgg 11146778  T
Q  260 agggagta 267  Q
    | ||||||    
T  11146777 aaggagta 11146770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Original strand, 11254768 - 11254801
Alignment:
Q  235 aaatagatcacttattcagggacggagggagtaa 268  Q
    |||||| |||||||||||||||||||||||||||    
T  11254768 aaataggtcacttattcagggacggagggagtaa 11254801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 17493794 - 17493826
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||| ||||||||||||||||||||||||||    
T  17493794 aaataggtcacttattcagggacggagggagta 17493826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 18575296 - 18575328
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||| ||||||||||||||||||||||||||    
T  18575296 aaataggtcacttattcagggacggagggagta 18575328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 36982435 - 36982185
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  36982435 aagaaaagtgtaaagatgaaagaaaaagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttat 36982336  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||     
T  36982335 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcctagaaatatgagaaggtcaagtattgtg 36982236  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  36982235 ggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 36982185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 14044304 - 14044055
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |    
T  14044304 aagaaaagtgtaaagatgaaagaaagagagtgatacttt-actaagttgcccttgtcattattttgaaactttttcacttttaaataatgattactttat 14044206  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |     
T  14044205 ttgttccactacaaactttaacatggggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattatg 14044106  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  14044105 ggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 14044055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 42897425 - 42897640
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  42897425 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 42897524  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  42897525 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 42897624  T
Q  218 ggacaaatatttttta 233  Q
    ||||||||||||||||    
T  42897625 ggacaaatatttttta 42897640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 2970717 - 2970964
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatca-ttattttgaaactttttcacttttaagtaatgattattttc 116  Q
    ||||||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| | | |||||||||||| ||  ||||||||||||||||||| ||||    
T  2970717 aagaaaaatgtaaagatgaaagaaagataatgatattttcactgaattgcccttgttaattattttgaaacctt--cacttttaagtaatgattactttc 2970814  T
Q  117 tttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgt 216  Q
    ||||||||  ||||||||||| ||| |  |||||||||| |||||||| || |||||| ||||||||| || |||||||| |||||| ||||| ||||||    
T  2970815 tttgttccactacaaacttta-cattgagaccacaaaaagtatttatacggggtaaatttgtcaaattctgcttagaaatttgagaatgtcaagtattgt 2970913  T
Q  217 aggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
     |||||||||||||||  |||||| |||  |||| ||||||||||||||||    
T  2970914 gggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 2970964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 160 - 268
Target Start/End: Complemental strand, 33403301 - 33403193
Alignment:
Q  160 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 259  Q
    |||||||| |||||  |||||||||||| ||  |||| |||||||||||| |||| |||||||| | ||||||| |||||||||||||||||||||||||    
T  33403301 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtattttaggacaatttttttttacaaatagatcacttattcagggacgg 33403202  T
Q  260 agggagtaa 268  Q
    |||||||||    
T  33403201 agggagtaa 33403193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 36767933 - 36768031
Alignment:
Q  24 agtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttgttc 123  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||| ||||   ||||||||||| ||||||||| |||||||||||    
T  36767933 agtgtaaagatgaaagaaagagagtgatatttttactgaattgcccttattattatttttaaac--cttcacttttaaataatgattactttctttgttc 36768030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 33404478 - 33404365
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||| |||| |||  |||||||| |||| |||| |||      
T  33404478 aagaaaaatgtaaagatgaaagaaagagagtgatatttttactgaattgcccttattattatttttaaaccttt--acttttaaataataattactttaa 33404381  T
Q  118 ttgttccgttacaaac 133  Q
    |||||||  |||||||    
T  33404380 ttgttccactacaaac 33404365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 5712665 - 5712600
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttg 83  Q
    ||||||| ||||||||||||||||||| | ||||| |||| |||| |||||||||| |||||||||    
T  5712665 aagaaaaatgtaaagatgaaagaaagaaagtgatattttttctgaattgcccttattattattttg 5712600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 36768782 - 36768889
Alignment:
Q  160 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 259  Q
    |||||||| |||||  |||||||||||| ||  |||| ||| |||||| | |||| | |||||| | ||||  | |||||| ||||||||||||||||||    
T  36768782 ttataaggggtaaaattgtcaaattttgctttaaaatttgataaggtcgagtattttgggacaatttttttaaaaaaataggtcacttattcagggacgg 36768881  T
Q  260 agggagta 267  Q
    ||||||||    
T  36768882 agggagta 36768889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 14044323 - 14044355
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||| ||||||||||||||||||||||||||    
T  14044323 aaataggtcacttattcagggacggagggagta 14044355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 36982454 - 36982486
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||| ||||||||||||||||||||||||||    
T  36982454 aaataggtcacttattcagggacggagggagta 36982486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 42897406 - 42897374
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||| ||||||||||||||||||||||||||    
T  42897406 aaataggtcacttattcagggacggagggagta 42897374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 10644 - 10893
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10644 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttct 10743  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||| |||||||||||| |||||||| ||||||     
T  10744 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtg 10843  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||| | ||||||| |||||| ||||||||||||||||||||||||||    
T  10844 ggacaatttttttttacaaataggtcacttattcagggacggagggagta 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 268
Target Start/End: Complemental strand, 10625 - 10592
Alignment:
Q  235 aaatagatcacttattcagggacggagggagtaa 268  Q
    |||||| |||||||||||||||||||||||||||    
T  10625 aaataggtcacttattcagggacggagggagtaa 10592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 29737654 - 29737405
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  29737654 aagaaaagtgtaaaaataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 29737555  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||     
T  29737554 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattgtg 29737455  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29737454 ggacaaatattttttacaaataggtcacttattcagggacggagggagta 29737405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 40232166 - 40232415
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  40232166 aagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 40232265  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||     
T  40232266 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtg 40232365  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  40232366 ggacaaatattttttacaaataggtcacttattcaaggacggagggagta 40232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 6392520 - 6392271
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  6392520 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactaagttgcccttgtcattattttgaaactttttcacttttaagtaatgattaatttct 6392421  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||||     
T  6392420 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtaaagtattgtg 6392321  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||| ||||    
T  6392320 ggacaaatattttttacaaatagatcacttattaaggaacggaggaagta 6392271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 27596137 - 27596385
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27596137 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgggttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttct 27596236  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    ||||| |  |||||||||||||||||| |||||||||| ||||||||| | |||||||||||||||||||  |||||||||||||||||||| ||||||     
T  27596237 ttgtttcactacaaactttaacatggg-accacaaaaagtatttataaagggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtg 27596335  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  27596336 ggacaaatattttttacaaataggtcacttattcagggacggagggagta 27596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 4041196 - 4040946
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  4041196 aagaaaagtgtaaagatgaaagaaagggagtgatacttttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattactttct 4041097  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| ||||||| || ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||     
T  4041096 ttgttccactacaaactttaacatggggaccacaacaagtatttataaggggtaaatccgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 4040997  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  4040996 ggacaaatattttttacaaataggtcacttattcagagacggagggagtaa 4040946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 41427702 - 41427948
Alignment:
Q  21 aaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttg 120  Q
    |||||||||||||||||||||||||| | ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41427702 aaaagtgtaaagatgaaagaaagagagtaatacttttattgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattactttctttg 41427801  T
Q  121 ttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtagga 220  Q
    || |  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |||    
T  41427802 tttcactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaaatattgtggga 41427901  T
Q  221 caaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||    
T  41427902 caaatattttttacaaataggtcacttatttaaggacggagggagta 41427948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 265
Target Start/End: Original strand, 25943698 - 25943943
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  25943698 aagaaaattgtaaagatgaaagaaagagagtgatacttttactgaattgccattgtcattattttgaaactttttcacttttaagtaatgattactttct 25943797  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| ||  || ||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  25943798 ttgttccactacaaactttaacatggggac--cataaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 25943895  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggag 265  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  25943896 ggacaaatattttttacaaataggtcacttattcagggacggagggag 25943943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 31689404 - 31689653
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| |||||    
T  31689404 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaaaaaatgattactttct 31689503  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    ||||| |  || ||||||||||||| | |||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||     
T  31689504 ttgtttcactataaactttaacatgaggaccacaaaaagtatatataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 31689603  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    ||||| |||||||||| |||||| ||||||||||||||||| ||||||||    
T  31689604 ggacagatattttttacaaataggtcacttattcagggacgaagggagta 31689653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 38276596 - 38276846
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||| |||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  38276596 aagaaaagagtaaagatgaaagaaagagaatgatgtttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 38276695  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||| ||| | |||||||||| ||||||||||| |||||||||||||||| || |||||||| ||| |||||||| ||||||     
T  38276696 ttgttccactacaaactttaatatgaggaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatatgaaaaggtcaagtattgtg 38276795  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||  |||||| |||  |||| |||||||||||||||||    
T  38276796 ggacaaatatttttttcaaataggtcaagtattgagggacggagggagtaa 38276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 24300205 - 24300445
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |          |||||||||||||||||||||||||||| |||||    
T  24300205 aagaaaagtgtgaagatgaaagaaagagagtgatacttttactgagttgcccttgt----------aaactttttcacttttaagtaatgattactttct 24300294  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    ||||| |  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||| |||||||| ||||||     
T  24300295 ttgtttcactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgataaggtcaagtattgtg 24300394  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| |||||||||||  ||||||||||||||    
T  24300395 ggacaaatattttttacaaataggtcacttattcaaagacggagggagtaa 24300445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 21442851 - 21443098
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||| | |||||||| | ||||||||||||||||  ||||||||||||||| ||| |||||    
T  21442851 aagaaaagtgtaaagatgaaaaaaatagaatgatatttttactaaattgcccttgttattattttgaaacttt--cacttttaagtaatggttactttct 21442948  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    || ||||  | |||||||| ||||||  |||||||||| |||||||||||  ||||| ||||||||| |  ||| ||||||||||||||||| ||||||     
T  21442949 ttattccactgcaaacttttacatggagaccacaaaaagtatttataagggataaatttgtcaaattctacttaaaaatctgagaaggtcaagtattgtg 21443048  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||  |||||| |||  |||| ||||||||||||||||    
T  21443049 ggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 21443098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 29 - 232
Target Start/End: Complemental strand, 48838296 - 48838095
Alignment:
Q  29 aaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttgttccgtta 128  Q
    |||||| ||||||||| ||||||| ||||||| | ||| |||| | |||||||| |||||||  ||||||||||||||||||| ||||||||||||  ||    
T  48838296 aaagataaaagaaagaaaatgatatttttactaaattgtccttgttattattttaaaacttt--cacttttaagtaatgattactttctttgttccacta 48838199  T
Q  129 caaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatatt 228  Q
    || ||||| ||||||  |||||||||| ||||||||||| |||||| ||||||||| || ||| ||||||||||| ||||| |||||| |||||||||||    
T  48838198 cacacttttacatggagaccacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaagtcaagtattgtgggacaaatatt 48838099  T
Q  229 tttt 232  Q
    ||||    
T  48838098 tttt 48838095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 22338217 - 22338126
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgatta 111  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||| ||||   ||||||||||| |||| ||||    
T  22338217 aagaaaagtgtaaagatgaaagaaagagagtgatatttttactgaattgcccttattattatttttaaac--cttcacttttaaataataatta 22338126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 22619999 - 22619883
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||| ||||| ||| ||||| |||| |||||||| ||||   ||||||||||| |||| |||| |||      
T  22619999 aagaaaagtgtaaagatgaaagaaagagagtgatatttttattgaattgcctttattattatttttaaac--cttcacttttaaataataattactttaa 22619902  T
Q  118 ttgttccgttacaaacttt 136  Q
    |||||||  ||||||||||    
T  22619901 ttgttccactacaaacttt 22619883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 22337818 - 22337710
Alignment:
Q  160 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatatttttt-ataaatagatcacttattcagggacg 258  Q
    |||||||| |||||  |||||| ||||| ||  |||| |||||||||||| |||| | |||||| | |||||| | |||||| |||||||||||||||||    
T  22337818 ttataaggggtaaaattgtcaatttttgctttaaaatttgagaaggtcaagtattttgggacaattttttttttacaaataggtcacttattcagggacg 22337719  T
Q  259 gagggagta 267  Q
    |||||||||    
T  22337718 gagggagta 22337710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 22619631 - 22619524
Alignment:
Q  160 ttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacgg 259  Q
    ||||||||||| ||  |||||||||||| ||  |||| ||||||| |||| |||| |   |||| | | ||||| |||||| ||||||||||||| ||||    
T  22619631 ttataaggagtcaaattgtcaaattttgctttaaaatttgagaagatcaagtattttgaaacaattttattttacaaataggtcacttattcaggaacgg 22619532  T
Q  260 agggagta 267  Q
    ||||||||    
T  22619531 agggagta 22619524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 25943681 - 25943649
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||| ||||||||||||||||||||||||||    
T  25943681 aaataggtcacttattcagggacggagggagta 25943649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 40232147 - 40232115
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| ||||||||||||||||    
T  40232147 aaatagatcacttattaagggacggagggagta 40232115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 5e-99; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 46862805 - 46862555
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  46862805 aagaaaagtgtaaagataaaagaaagagagtgatacttttcctgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 46862706  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||| ||||||     
T  46862705 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctaagaaggtcaagtattgtg 46862606  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  46862605 ggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 46862555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 38321894 - 38321645
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  38321894 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 38321795  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| |||||||||||  ||||||| | |||||||| ||||||||||||||||||||| ||||||     
T  38321794 ttgttccactacaaactttaacatggggaccacaaaaagtatttataagggttaaatcttttaaattttgcttagaaatctgagaaggtcaagtattgtg 38321695  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  38321694 ggacaaatattttttacaaataggtcagttattcagggacggagggagta 38321645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 39150948 - 39151197
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  39150948 aagaaaaatgtaaagataaaagaaagagaatgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 39151047  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||||     
T  39151048 ttgttccactacaaactttaacatgaggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattgtg 39151147  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  39151148 ggacaaatattttttacaaataggtcacttattcagggacggagagagta 39151197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 1929268 - 1929516
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |    
T  1929268 aagaaaagtgtaaagatgaaagaaaaagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattttttt-t 1929366  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||     
T  1929367 ttgttccactacaaactttaacatggggaccacaaaaaatatttataaggggtaaatctgtcaaattttgcttagaaatatgagaaggtcaagtattgtg 1929466  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  1929467 ggacaaatattttttacaaataggtcacttatttagggacggagggagta 1929516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 32046082 - 32045833
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||||| |||||||||||| | |||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  32046082 aagaaaagtgtaaaaatgaaagaaagaaagtgatacttttaccgagttgcccttgtcgttattttgaaactttttcacttttaagtaatgattactttct 32045983  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||||||     
T  32045982 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctttcaaattttgcttagaaatctgagaaggtcaagtattgtg 32045883  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  32045882 gaacaaatattttttacaaatagatcacttattcagggacggagggagta 32045833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 28036751 - 28037001
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatactttt-actgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttc 116  Q
    ||||||||||||||||| ||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  28036751 aagaaaagtgtaaagataaaagaaagagagtgatattttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttc 28036850  T
Q  117 tttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgt 216  Q
    ||||||||  |||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  28036851 tttgttccactacaaactttaacatggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgt 28036950  T
Q  217 aggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
     |||||||||||||||| |||||| ||| ||||| ||||||||||||||||    
T  28036951 gggacaaatattttttacaaataggtcatttattaagggacggagggagta 28037001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 46371170 - 46370926
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||     |||||||||||| |||||    
T  46371170 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgaattgcccttgtcattattttgaaactttttca-----aagtaatgattactttct 46371076  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||| |||||| ||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||| ||||||     
T  46371075 ttgttccactacaaactttaatatggga-ccacaaaaagtatttataaggggtaaatttgtcaaattttgcttagaaatctgagaaggtcaagtattgtg 46370977  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  46370976 ggacaaatattttttacaaataggtcacttattcagggacggagggagtaa 46370926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 50777246 - 50776997
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  50777246 aagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 50777147  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||||||||| |||||||| | |||||||||| |||| |     
T  50777146 ttgttccactacaaactttaacatggggaccccaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttaagaaggtcaagtattatg 50777047  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||  ||||||||| || |||| || |||||    
T  50777046 ggacaaatattttttacaaataagtcacttatttagagacgaagagagta 50776997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 8229313 - 8229063
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaaga-gaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttc 116  Q
    ||||||||||||||||||||| ||| | || ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  8229313 aagaaaagtgtaaagatgaaaaaaaaaagagtgatatttttactgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattactttc 8229214  T
Q  117 tttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgt 216  Q
    ||| || |  |||||||||||||||||| |||||||||| ||||||||||| |||||| |||||||||||| ||| |||||| ||||||| || |||||     
T  8229213 tttatttcactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatttgtcaaattttgcttaaaaatctaagaaggttaagtattga 8229114  T
Q  217 aggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
     | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8229113 ggaacaaatattttttataaataggtcacttattcagggacggagggagta 8229063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 1207503 - 1207751
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||     
T  1207503 aagaaaagtgtagagatgaaagaaagataatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattactttcc 1207602  T
Q  118 ttgttccgttacaaactttaacat-gggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgt 216  Q
    |||||||  ||||||||||||||| ||| ||  | |||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||| |||| |    
T  1207603 ttgttcctctacaaactttaacataggggac--ccaaaagtatttataagg-gtaaatctgtcaaattctgcttagaaatctgagaaggtcaagtattat 1207699  T
Q  217 aggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    | ||||||||||||||  |||||| |||  |||| | |||||||||||||||    
T  1207700 aagacaaatatttttttcaaataggtcaaatattgaaggacggagggagtaa 1207751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 40562487 - 40562735
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||||||||  |||||||||||||||||| |||||    
T  40562487 aagaaaagtgtaaagatgaaagaaagagaatgatatttttactgaattgcccttgttattattttgaaactttt--acttttaagtaatgattactttct 40562584  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    ||||||   |||||||||| ||||||  |||||||| | ||||||||||| |||||| | ||||||| || ||| |||| |||||| ||||| ||||||     
T  40562585 ttgttctactacaaacttttacatggagaccacaaagagtatttataaggggtaaatttatcaaattctgcttaaaaatatgagaatgtcaagtattgtg 40562684  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    |||||||||||||||  |||||| |||  |||| ||| |||||||||||||    
T  40562685 ggacaaatatttttttcaaataggtcaagtattgaggtacggagggagtaa 40562735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 9129455 - 9129679
Alignment:
Q  21 aaaagtgtaaagatgaaagaaagagaatgatact---tttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||||| ||||||||||||||||| |   |||||| | ||| |||| | |||||||| |||||||  ||||||||||||||||||| |||||    
T  9129455 aaaagtgtaaagataaaagaaagagaatgataatatttttactcaattgtccttgttattatttttaaacttt--cacttttaagtaatgattactttct 9129552  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||| ||| ||||||  |||||||||| ||||||||||| |||||| | ||||||| || ||| |||||||||||||| ||||||| |     
T  9129553 ttgttccactacaaaattttacatggagaccacaaaaaatatttataaggggtaaatttatcaaattctgcttaaaaatctgagaaggtaaaatattatg 9129652  T
Q  218 ggacaaatattttttataaatagatca 244  Q
     || |||||||||||  ||||||||||    
T  9129653 agataaatatttttttcaaatagatca 9129679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 96 - 264
Target Start/End: Complemental strand, 38817945 - 38817777
Alignment:
Q  96 ttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaa 195  Q
    ||||||||||| |||| |||||||||| |  |||||||||| ||||||| |||||||||| ||||||||||| |||||| | |||||||||| |||||||    
T  38817945 ttttaagtaattattactttctttgtttcactacaaacttttacatggggaccacaaaaagtatttataaggggtaaatttatcaaattttgcttagaaa 38817846  T
Q  196 tctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggaggga 264  Q
    | |||||| |||||||||| | |||||||||||||||  ||||||||||  |||| |||||| ||||||    
T  38817845 tttgagaaagtcaaatattatgggacaaatatttttttcaaatagatcaagtattgagggacagaggga 38817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 5e-96; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 28541638 - 28541887
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  28541638 aagaaaagtgtaaagatgaaagaaagagagtgatacttttactgggttgcccttgtcattattttgaaactttttcacttttaagtaatgattatttttt 28541737  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||||     
T  28541738 ttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtg 28541837  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    ||| |||||||||||| |||||  |||||||||||| |||||||||||||    
T  28541838 ggataaatattttttacaaataagtcacttattcagagacggagggagta 28541887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 29182840 - 29182591
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29182840 aagaaaaatgtaaagatgaaagaaagagagtgatatttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttct 29182741  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  ||||||||||||||| || |||||||||  ||||||||||  |||||||||||||||||||  |||||||||||||||||||| |||||||    
T  29182740 ttgttccactacaaactttaacatagggaccacaaaatgtatttataagaggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgta 29182641  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  29182640 ggacaaatattttttacaaataggtcacttattcagggacagagggagta 29182591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 12350521 - 12350271
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  12350521 aagaaaagtgtaaagatgaaagaaagagagtgatgcttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 12350422  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||    |||||||||||||||| | |||||||||| ||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||     
T  12350421 ttgttttactacaaactttaacatgaggaccacaaaaagtatatataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaaatattgtg 12350322  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    ||||||||| |||||| |||||| |||||||||||| |||||||| |||||    
T  12350321 ggacaaatactttttacaaataggtcacttattcagagacggaggaagtaa 12350271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 1241357 - 1241109
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||| |||||| |||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||    
T  1241357 aagaaaaatgtaaaaatgaaagaaagaaagtgatacttttactgagttgcccttgtcattattttgaaactttttca-ttttaagtaatgattactttct 1241259  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  | |||||||||| ||||| |||||||||| ||||||||||  ||||||||||||||||||| |||||||||||||||| |||| ||||||     
T  1241258 ttgttccactgcaaactttaatatggggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaagttcaagtattgtg 1241159  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1241158 ggacaaatattttttacaaatagatcacttattcagggacggagggagta 1241109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 267
Target Start/End: Complemental strand, 13042217 - 13041972
Alignment:
Q  21 aaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttg 120  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||  ||| |||| ||||||||||||||||||||||||||||    
T  13042217 aaaagtgtaaagatgaaagaaagagagtgatatttttactgagttgcccttgtcattatttaaaaaatttt-cacttttaagtaatgattattttctttg 13042119  T
Q  121 ttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtagga 220  Q
    ||||  ||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||| |||    
T  13042118 ttccactacaaactttaacatagggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctgagaaggtcaagtattgtggga 13042019  T
Q  221 caaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  13042018 caaatattttttacaaataggtcacttattcaaggacggagggagta 13041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 30736668 - 30736419
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  30736668 aagaaaagtgtaaagatgaaagaaagagaatgatatttttactgaattgtccttgtcattattttgaaactttttcacttttaagtaatgattactttct 30736569  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||||| |  ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||     
T  30736568 ttgttcctctacaaactttaacatggggattacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaaatattgtg 30736469  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||  |||||| |||  |||| ||||||||||| ||||    
T  30736468 ggacaaatatttttttcaaataggtcaagtattgagggacggaggaagta 30736419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 16436024 - 16435779
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  16436024 aagaaaagtgtaaagatgaaagaaag----tgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 16435929  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||||||| |||||||||||| |||||||| || ||||||||||||||||||  |||||||| |||||||||||| ||||||     
T  16435928 ttgttccactacaaactttaacatgagaaccacaaaaagtatttatatggggtaaatctgtcaaattttccttagaaatttgagaaggtcaagtattgtg 16435829  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||  ||| ||||| ||||||||||| ||||    
T  16435828 ggacaaatattttttacaaataagtcatttatttagggacggaggaagta 16435779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 7271129 - 7271383
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  7271129 aagaaaagtgtaaagatgaaagaaatagaatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 7271228  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    || ||||  |||||||||||||||||| || ||||||| ||||||||||| |||||||||||||||| || |||||||||| |||||||||| |||| |     
T  7271229 ttattccactacaaactttaacatggggacaacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatctaagaaggtcaagtattatg 7271328  T
Q  218 ggacaaatattttttat-aaatagatcacttattcagggacggagggagtaacac 271  Q
    ||||||||||||||| | |||||| |||  |||| ||||| |||| |||||||||    
T  7271329 ggacaaatattttttttcaaataggtcaagtattgagggatggagtgagtaacac 7271383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 31013546 - 31013760
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31013546 aagaaaagtgtaaaaacgaaagaaagataatgatatttttactgaattgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 31013645  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    ||||||   |||||||||||| |||||  ||||||||| |||||||||||  |||||| |||||||| || |||||||||||||||| |||| ||||||     
T  31013646 ttgttctactacaaactttaatatgggggccacaaaaaatatttataagggataaatccgtcaaattctgcttagaaatctgagaagatcaagtattgtg 31013745  T
Q  218 ggacaaatatttttt 232  Q
    | |||||||||||||    
T  31013746 gaacaaatatttttt 31013760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 1870780 - 1870569
Alignment:
Q  19 agaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctt 118  Q
    |||||||| |||||||||||||||| |||||||| ||||||| | |||||||| | ||||||||||| | ||  ||||||||||||||||||| ||||||    
T  1870780 agaaaagtataaagatgaaagaaagggaatgatatttttactaaattgcccttgttattattttgaagcctt--cacttttaagtaatgattactttctt 1870683  T
Q  119 tgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtag 218  Q
    ||||||  |||||||||| ||||||  | |||||||| ||||||||||| |||||| ||||||||| || ||| ||||||||||||||||| |||||| |    
T  1870682 tgttccactacaaacttttacatggagatcacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaggtcaagtattgttg 1870583  T
Q  219 gacaaatatttttt 232  Q
     |||||||||||||    
T  1870582 aacaaatatttttt 1870569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 13210590 - 13210396
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| | |||||| | || |||||||||||||  |||||||||||||  |||| |||||    
T  13210590 aagaaaagtgtaaagatgaaagaaagagaatgattattttactgaatcgcccttgttat-attttgaaacttt--cacttttaagtaagaattactttct 13210494  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattg 215  Q
    |||||||  |||||||||| ||||||  |||||||||| ||||||||| | |||||| ||||||||| || ||| |||| |||||||||||| |||||    
T  13210493 ttgttccactacaaacttttacatggagaccacaaaaaatatttataatgggtaaatttgtcaaattctgcttaaaaatttgagaaggtcaagtattg 13210396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 31833642 - 31833743
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||| | ||||||| ||||||| | ||||||||   |||||||||||||   |||| ||||||||||||||||||||||    
T  31833642 aagaaaagtgtaaagatgaaagaaaaataatgatatttttactaaattgccctt---attattttgaaac--cttcatttttaagtaatgattattttct 31833736  T
Q  118 ttgttcc 124  Q
    |||||||    
T  31833737 ttgttcc 31833743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 258
Target Start/End: Original strand, 31833747 - 31833856
Alignment:
Q  149 acaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcactta 248  Q
    ||||||| ||||| |||||  ||||| ||||||||| || ||| ||||||||||||||||| ||| || |||||||||||||||  ||||||||||  ||    
T  31833747 acaaaaagtatttttaagggataaatttgtcaaattatgcttaaaaatctgagaaggtcaagtatcgtgggacaaatatttttttcaaatagatcaagta 31833846  T
Q  249 ttcagggacg 258  Q
    || |||||||    
T  31833847 ttgagggacg 31833856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 16436043 - 16436078
Alignment:
Q  235 aaatagatcacttattcagggacggagggagtaaca 270  Q
    |||||| |||||||||||||||||||||||||||||    
T  16436043 aaataggtcacttattcagggacggagggagtaaca 16436078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 1241376 - 1241408
Alignment:
Q  235 aaatagatcacttattcagggacggagggagta 267  Q
    |||||||| ||||||||||||||||||||||||    
T  1241376 aaatagattacttattcagggacggagggagta 1241408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 10068 - 10317
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||    
T  10068 aagaaaagtgtaaagataaaagaaagagagtgatatttttactgagttgcccttgttattattttgaaactttttcacttttaagtaatgattactttct 10167  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  || ||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||| |||||||| |||||||||||| ||||||     
T  10168 ttgttccactataaactttaacatggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatatgagaaggtcaagtattgtg 10267  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  10268 ggacaaatattttttacaaatagatcacttattcaggaacggagggagta 10317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 70002 - 69753
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  70002 aagaaaagtgtaaagatgaaagaaagagagtgataattttactgagttgtccttgtcattattttgaaactttttcacttttaagtaatgattactttct 69903  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    |||||||  |||||||||||| | ||| | |||||||| ||||||||||  ||||||||||||||||||| |||||||| |||||||||||| ||||||     
T  69902 ttgttccactacaaactttaatacggggatcacaaaaagtatttataagcggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtg 69803  T
Q  218 ggacaaatattttttataaatagatcacttattcagggacggagggagta 267  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  69802 ggacaaatattttttacaaatatgtcacttattcagggacggagggagta 69753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 141; Significance: 6e-74; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 63 - 267
Target Start/End: Complemental strand, 16561 - 16357
Alignment:
Q  63 gttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttgttccgttacaaactttaacatgggaaccacaaaaattattta 162  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||||| |||||||||| ||||||    
T  16561 gttgcctttgtcattattttgaaactttttcacttttaagtaatgattactttctttgtttcactacaaactttaacatggggaccacaaaaagtattta 16462  T
Q  163 taaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggacaaatattttttataaatagatcacttattcagggacggagg 262  Q
    ||| | ||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  16461 taaagggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagg 16362  T
Q  263 gagta 267  Q
    |||||    
T  16361 gagta 16357  T

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Target: scaffold0318; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 16593 - 16565
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagaga 46  Q
    |||||||||||||||||||||||||||||    
T  16593 aagaaaagtgtaaagatgaaagaaagaga 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 4063 - 3834
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    |||||||| |||||||||||| ||| |||  | ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||    
T  4063 aagaaaagggtaaagatgaaaaaaaaagagcgctacttttactgagttacccttgtcattattttaaaactttttcacttttaagtaatgattactttct 3964  T
Q  118 ttgttccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgta 217  Q
    ||||||| ||||||||||||||||| | ||| |||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||| |     
T  3963 ttgttccattacaaactttaacatgaggaccgcaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattatg 3864  T
Q  218 ggacaaatattttttataaatagatcactt 247  Q
    |||||||||||||||| |||||| ||||||    
T  3863 ggacaaatattttttacaaataggtcactt 3834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 92220 - 92346
Alignment:
Q  18 aagaaaagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttct 117  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  92220 aagaaaagtgtaaagatgaaagaaagagagtgacacttttactgagttgcccttgtcattattttgaaactttttcacttttaagtaatgattactttct 92319  T
Q  118 ttgttccgttacaaactttaacatggg 144  Q
    |||||||  ||||||||||||||||||    
T  92320 ttgttccactacaaactttaacatggg 92346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 92374 - 92421
Alignment:
Q  221 caaatattttttataaatagatcacttattcagggacggagggagtaa 268  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  92374 caaatattttttacaaatagatcacttattcagagacggagggagtaa 92421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1194 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1194
Description:

Target: scaffold1194; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 232
Target Start/End: Complemental strand, 1212 - 1014
Alignment:
Q  23 aagtgtaaagatgaaagaaagagaatgatacttttactgagttgcccttatcattattttgaaactttttcacttttaagtaatgattattttctttgtt 122  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||| | ||||||||||||| ||  ||||||||||||||||||         |||    
T  1212 aagtgtaaagatgaaagaaagagaatgatatttttactgaattgctcttgttattattttgaaacctt--cacttttaagtaatgatt---------gtt 1124  T
Q  123 ccgttacaaactttaacatgggaaccacaaaaattatttataaggagtaaatctgtcaaattttgtttagaaatctgagaaggtcaaatattgtaggaca 222  Q
    ||  |||||||||| ||||||  |||||||||| ||||||||||| |||||| ||||||||  || ||| |||||||||||| |||| |||||| |||||    
T  1123 ccactacaaacttttacatggagaccacaaaaagtatttataaggggtaaatttgtcaaatcctgcttaaaaatctgagaagctcaagtattgtgggaca 1024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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