View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6402_low_1 (Length: 450)

Name: NF6402_low_1
Description: NF6402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6402_low_1
NF6402_low_1
[»] chr2 (40 HSPs)
chr2 (1-258)||(19504947-19505210)
chr2 (337-434)||(29242148-29242245)
chr2 (341-434)||(41960940-41961033)
chr2 (341-434)||(45327820-45327913)
chr2 (338-434)||(4167019-4167115)
chr2 (337-434)||(4478465-4478563)
chr2 (341-434)||(4264087-4264180)
chr2 (341-434)||(17071747-17071840)
chr2 (337-434)||(19424638-19424735)
chr2 (337-434)||(33660378-33660475)
chr2 (341-434)||(37905808-37905901)
chr2 (337-434)||(44286045-44286142)
chr2 (341-434)||(36642086-36642181)
chr2 (341-431)||(4763731-4763821)
chr2 (341-434)||(3177039-3177132)
chr2 (341-434)||(31570744-31570837)
chr2 (341-434)||(33550996-33551089)
chr2 (337-434)||(41463860-41463957)
chr2 (341-434)||(43648255-43648348)
chr2 (338-434)||(2325388-2325476)
chr2 (340-434)||(7006931-7007025)
chr2 (341-435)||(26357677-26357771)
chr2 (341-427)||(33902166-33902252)
chr2 (341-434)||(19313952-19314044)
chr2 (341-434)||(27349949-27350041)
chr2 (341-434)||(33709242-33709335)
chr2 (341-432)||(5881639-5881729)
chr2 (341-432)||(18494292-18494383)
chr2 (341-434)||(17054106-17054199)
chr2 (341-435)||(39167372-39167466)
chr2 (337-434)||(43770849-43770946)
chr2 (341-412)||(11366413-11366484)
chr2 (341-412)||(13711564-13711635)
chr2 (341-435)||(19289332-19289426)
chr2 (337-386)||(41051263-41051312)
chr2 (344-416)||(19501768-19501839)
chr2 (342-410)||(31861953-31862021)
chr2 (342-434)||(41465602-41465694)
chr2 (359-434)||(44913781-44913856)
chr2 (397-434)||(18258297-18258334)
[»] chr7 (46 HSPs)
chr7 (337-434)||(25691537-25691634)
chr7 (337-434)||(8861356-8861453)
chr7 (342-434)||(27283820-27283912)
chr7 (337-434)||(5657474-5657571)
chr7 (341-435)||(27421372-27421465)
chr7 (341-419)||(30055602-30055680)
chr7 (341-434)||(21991711-21991804)
chr7 (337-434)||(22687310-22687407)
chr7 (341-432)||(11071281-11071372)
chr7 (341-434)||(12390623-12390716)
chr7 (341-434)||(18797402-18797495)
chr7 (337-434)||(26980394-26980491)
chr7 (341-430)||(29173615-29173704)
chr7 (341-434)||(31579057-31579150)
chr7 (337-434)||(41765071-41765168)
chr7 (337-434)||(44598737-44598834)
chr7 (341-434)||(48928557-48928649)
chr7 (350-434)||(37704241-37704325)
chr7 (338-434)||(43686112-43686208)
chr7 (341-432)||(37347097-37347188)
chr7 (341-434)||(4582994-4583087)
chr7 (341-434)||(7334869-7334962)
chr7 (341-434)||(9355819-9355912)
chr7 (337-434)||(15612752-15612849)
chr7 (338-435)||(24211813-24211910)
chr7 (341-434)||(31520717-31520809)
chr7 (341-434)||(32432527-32432620)
chr7 (337-434)||(32593182-32593278)
chr7 (341-434)||(38258620-38258713)
chr7 (341-434)||(48928290-48928382)
chr7 (338-434)||(32821046-32821142)
chr7 (359-434)||(6546612-6546687)
chr7 (337-434)||(33688255-33688352)
chr7 (341-434)||(10481680-10481773)
chr7 (337-434)||(12165823-12165920)
chr7 (342-434)||(44413372-44413464)
chr7 (359-434)||(15672755-15672830)
chr7 (337-388)||(26524366-26524417)
chr7 (341-434)||(10359207-10359300)
chr7 (376-435)||(37703490-37703549)
chr7 (392-434)||(26588077-26588119)
chr7 (341-415)||(37109947-37110021)
chr7 (341-434)||(43925177-43925269)
chr7 (341-415)||(17842598-17842672)
chr7 (376-434)||(38053588-38053646)
chr7 (338-411)||(23111262-23111335)
[»] chr3 (50 HSPs)
chr3 (340-434)||(11357356-11357450)
chr3 (337-434)||(37157794-37157891)
chr3 (337-431)||(37203154-37203248)
chr3 (341-434)||(21193697-21193790)
chr3 (341-434)||(33378777-33378870)
chr3 (340-433)||(53229145-53229238)
chr3 (337-432)||(52040916-52041011)
chr3 (337-434)||(22451055-22451152)
chr3 (341-434)||(27480371-27480464)
chr3 (341-434)||(44186493-44186586)
chr3 (337-434)||(44891584-44891681)
chr3 (337-432)||(11466911-11467006)
chr3 (341-432)||(26941254-26941345)
chr3 (341-419)||(42506082-42506160)
chr3 (341-434)||(4015551-4015644)
chr3 (337-434)||(39282739-39282836)
chr3 (337-434)||(3362340-3362439)
chr3 (338-434)||(51212973-51213069)
chr3 (352-434)||(11835619-11835702)
chr3 (340-434)||(45174595-45174690)
chr3 (341-419)||(3655209-3655287)
chr3 (344-434)||(29163912-29164002)
chr3 (337-435)||(43348345-43348442)
chr3 (341-435)||(54828692-54828786)
chr3 (341-434)||(4761641-4761734)
chr3 (341-434)||(25579830-25579923)
chr3 (338-435)||(48355029-48355126)
chr3 (341-426)||(53176145-53176230)
chr3 (341-434)||(24708107-24708202)
chr3 (338-434)||(46297754-46297850)
chr3 (341-433)||(46994654-46994746)
chr3 (341-419)||(20373303-20373381)
chr3 (337-434)||(22446056-22446154)
chr3 (337-435)||(32373557-32373655)
chr3 (338-432)||(38591786-38591880)
chr3 (341-434)||(29099446-29099539)
chr3 (337-431)||(2008020-2008114)
chr3 (341-434)||(35844417-35844511)
chr3 (341-435)||(40552250-40552344)
chr3 (366-435)||(1089809-1089878)
chr3 (341-434)||(24488954-24489047)
chr3 (341-434)||(34133026-34133119)
chr3 (341-434)||(40936082-40936174)
chr3 (341-434)||(43975880-43975973)
chr3 (342-434)||(14586662-14586754)
chr3 (362-434)||(33698265-33698337)
chr3 (371-434)||(22622710-22622773)
chr3 (341-427)||(47481613-47481699)
chr3 (341-434)||(7327474-7327567)
chr3 (341-412)||(21009816-21009887)
[»] chr8 (37 HSPs)
chr8 (337-434)||(11727119-11727216)
chr8 (337-434)||(5299944-5300041)
chr8 (341-434)||(6098516-6098609)
chr8 (337-434)||(38644073-38644170)
chr8 (340-435)||(39099116-39099211)
chr8 (340-434)||(41910986-41911080)
chr8 (341-434)||(1205026-1205119)
chr8 (341-434)||(12876208-12876301)
chr8 (341-434)||(13307722-13307815)
chr8 (337-434)||(27082836-27082933)
chr8 (337-434)||(34895062-34895159)
chr8 (341-419)||(10555215-10555293)
chr8 (341-434)||(1150103-1150196)
chr8 (341-426)||(16222962-16223047)
chr8 (341-434)||(37970517-37970610)
chr8 (338-434)||(16446873-16446969)
chr8 (338-434)||(40862516-40862611)
chr8 (337-435)||(1953986-1954085)
chr8 (341-435)||(41362614-41362708)
chr8 (341-430)||(44869596-44869686)
chr8 (337-434)||(465937-466034)
chr8 (341-434)||(1149630-1149723)
chr8 (341-434)||(23854429-23854522)
chr8 (346-435)||(33906316-33906405)
chr8 (341-434)||(36694964-36695057)
chr8 (345-435)||(35459708-35459798)
chr8 (341-434)||(9864247-9864340)
chr8 (341-434)||(34952029-34952122)
chr8 (341-419)||(31933899-31933977)
chr8 (392-434)||(43025852-43025894)
chr8 (341-434)||(43643593-43643686)
chr8 (338-434)||(7890955-7891051)
chr8 (392-435)||(18259233-18259276)
chr8 (371-434)||(4132684-4132746)
chr8 (376-434)||(7998428-7998487)
chr8 (341-434)||(30654581-30654674)
chr8 (337-365)||(4133077-4133105)
[»] chr5 (46 HSPs)
chr5 (341-434)||(14919510-14919603)
chr5 (341-434)||(24886204-24886297)
chr5 (341-435)||(9200333-9200427)
chr5 (341-434)||(22980893-22980986)
chr5 (337-434)||(23954771-23954868)
chr5 (338-434)||(1429127-1429223)
chr5 (341-435)||(39572919-39573013)
chr5 (341-434)||(699250-699343)
chr5 (341-434)||(12910455-12910548)
chr5 (341-434)||(27318469-27318562)
chr5 (341-434)||(30969306-30969399)
chr5 (337-434)||(31786628-31786725)
chr5 (341-435)||(21088747-21088841)
chr5 (341-434)||(22019732-22019825)
chr5 (337-434)||(33908329-33908426)
chr5 (337-433)||(14409310-14409405)
chr5 (338-434)||(36866859-36866955)
chr5 (338-434)||(40133482-40133578)
chr5 (338-434)||(43308634-43308730)
chr5 (341-434)||(36860523-36860617)
chr5 (341-434)||(32563249-32563342)
chr5 (338-434)||(8741868-8741964)
chr5 (338-434)||(27330401-27330497)
chr5 (337-432)||(5112297-5112392)
chr5 (341-419)||(7208861-7208938)
chr5 (349-434)||(6824461-6824546)
chr5 (337-434)||(23116204-23116301)
chr5 (341-434)||(26268174-26268267)
chr5 (341-434)||(35504465-35504558)
chr5 (341-434)||(35511459-35511552)
chr5 (341-434)||(38528219-38528311)
chr5 (341-432)||(5837655-5837746)
chr5 (341-435)||(31705593-31705686)
chr5 (337-434)||(35933991-35934089)
chr5 (337-434)||(7693326-7693423)
chr5 (337-434)||(8466840-8466937)
chr5 (341-434)||(19119959-19120052)
chr5 (338-415)||(22255279-22255356)
chr5 (341-434)||(25500908-25501001)
chr5 (341-434)||(35826466-35826558)
chr5 (341-419)||(15992537-15992615)
chr5 (341-434)||(17158013-17158105)
chr5 (337-434)||(28416509-28416606)
chr5 (346-434)||(15724594-15724681)
chr5 (341-434)||(22974064-22974157)
chr5 (392-434)||(25669737-25669779)
[»] chr1 (48 HSPs)
chr1 (337-434)||(27227472-27227569)
chr1 (337-434)||(33725587-33725684)
chr1 (338-434)||(15752122-15752218)
chr1 (337-434)||(4330373-4330470)
chr1 (337-434)||(10181995-10182092)
chr1 (337-434)||(15168188-15168285)
chr1 (337-435)||(47279281-47279379)
chr1 (341-434)||(7079050-7079143)
chr1 (338-434)||(8222221-8222317)
chr1 (337-432)||(16415738-16415833)
chr1 (341-432)||(42721135-42721226)
chr1 (341-435)||(2959844-2959938)
chr1 (340-434)||(30326939-30327033)
chr1 (341-434)||(3535028-3535121)
chr1 (337-434)||(14758133-14758230)
chr1 (341-434)||(37451382-37451474)
chr1 (341-434)||(38823310-38823403)
chr1 (337-434)||(47682481-47682578)
chr1 (338-434)||(25160725-25160821)
chr1 (337-429)||(31621545-31621637)
chr1 (338-434)||(32216148-32216244)
chr1 (341-412)||(28564790-28564861)
chr1 (341-434)||(15383029-15383122)
chr1 (337-434)||(27532968-27533064)
chr1 (338-419)||(28769745-28769826)
chr1 (337-434)||(34012364-34012461)
chr1 (337-434)||(41926255-41926352)
chr1 (341-434)||(48620733-48620826)
chr1 (341-434)||(51128955-51129048)
chr1 (341-428)||(27563898-27563985)
chr1 (341-419)||(18422747-18422825)
chr1 (341-419)||(30254519-30254597)
chr1 (341-434)||(238500-238593)
chr1 (371-434)||(38759659-38759722)
chr1 (337-435)||(39393475-39393574)
chr1 (341-419)||(23999443-23999521)
chr1 (337-435)||(40884905-40885003)
chr1 (341-434)||(9903041-9903134)
chr1 (341-434)||(10922823-10922916)
chr1 (341-434)||(11742338-11742430)
chr1 (337-434)||(27267187-27267283)
chr1 (341-418)||(27763314-27763391)
chr1 (341-419)||(37618894-37618974)
chr1 (337-434)||(1547379-1547468)
chr1 (341-434)||(32267130-32267223)
chr1 (338-434)||(19899756-19899852)
chr1 (337-434)||(3309239-3309337)
chr1 (341-434)||(22170807-22170900)
[»] scaffold0002 (3 HSPs)
scaffold0002 (338-434)||(231-327)
scaffold0002 (342-434)||(408421-408512)
scaffold0002 (337-434)||(94375-94472)
[»] chr6 (17 HSPs)
chr6 (337-434)||(15491711-15491808)
chr6 (337-435)||(20768180-20768276)
chr6 (341-434)||(7235026-7235118)
chr6 (338-434)||(21017103-21017199)
chr6 (341-434)||(6091174-6091267)
chr6 (337-417)||(33618930-33619010)
chr6 (341-434)||(7055206-7055299)
chr6 (341-434)||(29182263-29182356)
chr6 (341-419)||(5627491-5627569)
chr6 (337-435)||(30353348-30353446)
chr6 (341-434)||(1945934-1946027)
chr6 (341-434)||(4318813-4318907)
chr6 (341-426)||(8513333-8513419)
chr6 (341-434)||(3879930-3880023)
chr6 (345-434)||(33892994-33893082)
chr6 (337-426)||(6089004-6089094)
chr6 (337-366)||(18498530-18498559)
[»] chr4 (43 HSPs)
chr4 (339-434)||(46888175-46888270)
chr4 (341-435)||(25701074-25701168)
chr4 (349-434)||(1815409-1815494)
chr4 (337-434)||(33816551-33816648)
chr4 (341-434)||(55477909-55478002)
chr4 (340-434)||(6864134-6864228)
chr4 (341-419)||(19089486-19089564)
chr4 (341-419)||(37663774-37663852)
chr4 (341-434)||(28003004-28003097)
chr4 (341-434)||(32592193-32592286)
chr4 (337-434)||(34948115-34948212)
chr4 (338-428)||(4934226-4934316)
chr4 (342-432)||(5047985-5048075)
chr4 (341-435)||(38011954-38012048)
chr4 (341-434)||(23761172-23761264)
chr4 (337-434)||(33341495-33341591)
chr4 (337-434)||(55241123-55241219)
chr4 (338-434)||(19440666-19440762)
chr4 (338-434)||(35021053-35021149)
chr4 (341-432)||(36493708-36493799)
chr4 (341-435)||(27396716-27396810)
chr4 (345-434)||(9139349-9139438)
chr4 (338-430)||(29584222-29584314)
chr4 (341-416)||(50764830-50764905)
chr4 (376-434)||(30002650-30002708)
chr4 (341-434)||(17167813-17167906)
chr4 (341-434)||(17173390-17173483)
chr4 (341-432)||(32579547-32579637)
chr4 (337-434)||(37775765-37775860)
chr4 (345-419)||(42199833-42199907)
chr4 (341-434)||(54499255-54499349)
chr4 (341-434)||(879566-879659)
chr4 (337-434)||(4598088-4598184)
chr4 (341-434)||(25184213-25184306)
chr4 (381-434)||(39398049-39398102)
chr4 (341-434)||(50697342-50697434)
chr4 (342-434)||(32912598-32912690)
chr4 (341-434)||(47253848-47253933)
chr4 (337-428)||(49376063-49376154)
chr4 (376-434)||(7703644-7703702)
chr4 (341-434)||(17272068-17272157)
chr4 (371-434)||(3042749-3042812)
chr4 (376-430)||(35025618-35025672)
[»] scaffold0318 (1 HSPs)
scaffold0318 (337-434)||(12005-12102)
[»] scaffold0291 (1 HSPs)
scaffold0291 (341-415)||(7987-8061)
[»] scaffold0061 (1 HSPs)
scaffold0061 (338-412)||(44054-44128)
[»] scaffold0017 (1 HSPs)
scaffold0017 (338-412)||(154659-154733)
[»] scaffold0008 (1 HSPs)
scaffold0008 (341-435)||(267384-267478)
[»] scaffold0022 (1 HSPs)
scaffold0022 (341-419)||(146023-146101)


Alignment Details
Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 19505210 - 19504947
Alignment:
Q  1 agattaatgcatgaagcaccgtgttatgatttcagaatttgcaatttgaa-------cagagatataactaaaggcaatttgaacttaagataaacaaac 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  19505210 agattaatgcatgaagcaccgtgttatgatttcagaatttgcaatttgaaatttgaacagagatataactaaaggcaatttgaacttaagataaacaaac 19505111  T
Q  94 aatatgatagaataaagaaggaattggaattatatgataatggcactgccaattgcat-nnnnnnngtacaaaatatgaaaagaatgcttaacagctcat 192  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||        |||||||||||||||||||||||||||| || |     
T  19505110 aatatgatagaataaaggaggaattggaattatatgataatggcagtgccaatggcataaagaaaggtacaaaatatgaaaagaatgcttaacaactaag 19505011  T
Q  193 agggagaaagcgatccactttttactctaaaatttcacacacactctcattcccaatcattttcct 258  Q
    || ||||||| |||||||||||||||||||||||   |||||||||||||   |||||||||||||    
T  19505010 agcgagaaagagatccactttttactctaaaatt--ccacacactctcatcatcaatcattttcct 19504947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 29242245 - 29242148
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||||| ||||||||| || |||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  29242245 gtggtatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaaaactacacttaatctaattttatcctaccttgttttaagtgtaaca 29242148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 41960940 - 41961033
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| |||| |||||||| |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  41960940 catcaaaagttcagtccacatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgtttcaagtgtaaca 41961033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 45327820 - 45327913
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||||||| || |||| |||| |||||||| ||| || ||||||||||||||||||||||| ||||||||||||||    
T  45327820 catcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttttaagtgtaaca 45327913  T

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Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 4167019 - 4167115
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||| |||||||| |  |||| |||| | |||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  4167019 tggcatcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaaca 4167115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 4478465 - 4478563
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| |||||||||||||| || |||| |||| |||||||| | |||| ||||||||| |||||||||||||| ||||||||||||||    
T  4478465 gtggcatcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaatttttatcctaccttgttttaagtgtaaca 4478563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 4264180 - 4264087
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||  ||||||||||| |||| |||||||||| || | |||| ||||||||||||||||||||||| |||||||| |||||    
T  4264180 catcaaaagttcagtctccatagtattatcaattcatcatattaagaagaatacacttaatctaattttatcctaccttgttttaagtttaaca 4264087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 17071840 - 17071747
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||| ||  ||||||||| || |||| |||| |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||    
T  17071840 catcaaaagttcggtattcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttattttaagcgtaaca 17071747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 19424735 - 19424638
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| |||||||||||||| || |||| |||| |||||||| | |||  |||||||||||||||| |||||| ||||||||||||||    
T  19424735 gtggcatcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacgcttaatctaattttatcttaccttgttttaagtgtaaca 19424638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 33660475 - 33660378
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||| |||||| || |||| || | |||||||  | |||| ||||||||||||||||||||||| ||||||||||||||    
T  33660475 gtggcatcaaaagttcagtcctcttagtatcatcaattcattagattaacaggaatacacttaatctaattttatcctaccttgttttaagtgtaaca 33660378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 37905808 - 37905901
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| || |||| ||||||    
T  37905808 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttataagcgtaaca 37905901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 44286045 - 44286142
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| ||||| |||||||| || |||| |||| |||||||| | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  44286045 gtggcatcaaaagtttagtccacatagtatcataaattcatcagattaacaataatacacttaatctaattttattctaccttgttttaagtgtaaca 44286142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 36642086 - 36642181
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa--ttttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| | |||| |||||||||  |||||||||||||| ||||||||||||||    
T  36642086 catcaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagaatacacttaatctaattttttatcctaccttgttttaagtgtaaca 36642181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 4763731 - 4763821
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgta 431  Q
    ||||||||||||||| | |||||||| || |||| |||| ||||||||||||||| ||||||||||||||| ||||||| ||| |||||||    
T  4763731 catcaaaagttcagttcccatagtataatcaattcatcagattaacaaaactacacttaatctaattttattctaccttgtttcaagtgta 4763821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 3177039 - 3177132
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || |||| |||| | ||| || | |||| |||||||||||||||| |||||| ||||||||||||||    
T  3177039 catcaaaagttcagtcctcatagtatcatcaattcatcagactaagaagaatacacttaatctaattttatcttaccttgttttaagtgtaaca 3177132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 31570837 - 31570744
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| |||| |||||||| | |||| |||||||||||||||| ||| || ||||||||||||||    
T  31570837 catcaaaagttcagtccacatagtatcatgaattcatcagattaacaagaatacacttaatctaattttatcttacattgttttaagtgtaaca 31570744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 33551089 - 33550996
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||| ||| ||||||||| || |||| |||| |||||||| |||||| |||||||||||||||||||| || ||||||| ||||||    
T  33551089 catcaaaagttcggtcttcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctacgttgttttaagcgtaaca 33550996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 41463957 - 41463860
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||||||| || |||| ||||||||||||| | ||| |||||| |||||||||| ||| || |||||| |||||||    
T  41463957 gtggcatcaaaagttcaatcctcatagtatcatcaattcatcatattaacaagaatacttttaatataattttatcatactttgttttaattgtaaca 41463860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 43648348 - 43648255
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||||||| || || | |||| |||||||| |||||| |||||||||||||||| |||||| || |||||||||||    
T  43648348 catcaaaagttcagtcatcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcataccttgttataagtgtaaca 43648255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 2325476 - 2325388
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||||||| || ||        |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||    
T  2325476 tggcatcaaaagttcagtcctcatagtatcatcaa--------attaacaagactacacttaatctaattttatcctaccttattttaagcgtaaca 2325388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 7007025 - 7006931
Alignment:
Q  340 gcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||| ||| | |||||||| || ||||||| | |||||||| | |||| |||||||||||||||| |||||| ||||||||||||||    
T  7007025 gcatcaaaagtttagttcccatagtatcatcaatttataagattaacaagaatacacttaatctaattttatcataccttgttttaagtgtaaca 7006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 26357677 - 26357771
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||||||| || ||||  |||| |||| ||||||||||||| |  ||| ||||||||||||||||||||||| ||| |||||||||||    
T  26357677 catcaaaagttcagttcttatagagttatcaattcatcatattaacaagatcacacttaatctaattttatcctaccttgtttcaagtgtaacat 26357771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 33902166 - 33902252
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaag 427  Q
    |||||||||||||||||||| ||||| || | || |||| |||||||| |||| |||||||| |||||||||||||||| |||||||    
T  33902166 catcaaaagttcagtcctcaaagtatcatcagttcatcagattaacaagactatatttaatcgaattttatcctaccttgttttaag 33902252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 19313952 - 19314044
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||| ||||||| || |||| |||| |||||||| | |||| |||||| ||||||| |||||||| ||||||||||||||    
T  19313952 catcaaaagttcagtcct-atagtatcatcaattcatcagattaacaagaatacacttaatcgaattttaccctaccttgttttaagtgtaaca 19314044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 27350041 - 27349949
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| | |||||| || |||| |||| |||||||| | |||| ||||||||||||||||| ||||| ||||||||||||||    
T  27350041 catcaaaagttcagtcc-cttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatccaaccttgttttaagtgtaaca 27349949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 33709335 - 33709242
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || || |  ||| |||||||| | |||  ||||||||||||||||||||||| ||||||||||||||    
T  33709335 catcaaaagttcagtccccatagtatcatcaaatattcagattaacaagaatacgcttaatctaattttatcctaccttgttttaagtgtaaca 33709242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 5881639 - 5881729
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    ||||||||||| ||||| | |||||| || |||| ||||||||||||| | |||||||||||||| |||||| |||||| ||||||||||||    
T  5881639 catcaaaagttgagtccccttagtatcatcaattcatcatattaacaagaatacatttaatctaa-tttatcataccttgttttaagtgtaa 5881729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 18494383 - 18494292
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    |||||||||||||||||||||||||| || |||| |||| ||| || | | |||| || |||||||||||||||||||| | ||||||||||    
T  18494383 catcaaaagttcagtcctcatagtatcatcaattcatcagattcactagaatacacttgatctaattttatcctaccttgtattaagtgtaa 18494292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 17054199 - 17054106
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||| | ||  ||||| ||| || |||| |||| |||||||| || ||| ||||||||||||||||||||||||||||||| ||||||    
T  17054199 catcaaaagtncggtattcataatatcatcaattcatcagattaacaagaccacacttaatctaattttatcctaccttattttaagcgtaaca 17054106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 39167466 - 39167372
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||||||||||| || |||| || | | |||||| | |||| ||| |||||||||||  |||||| |||||||||||||||    
T  39167466 catcaaaagttcagtcctcatagtatcatcaattcattagagtaacaagaatacacttattctaattttattataccttgttttaagtgtaacat 39167372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 43770946 - 43770849
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||| | || ||| || |||| |||| |||||||| | || | ||||| |||||||||||| |||| ||||||||||||||    
T  43770946 gtggcatcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatatacttaatttaattttatcctgccttgttttaagtgtaaca 43770849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 412
Target Start/End: Complemental strand, 11366484 - 11366413
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatc 412  Q
    |||||||||||||| ||||||||||| || |||| ||||  ||||||| |||||||||||| ||||||||||    
T  11366484 catcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacatttaatataattttatc 11366413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 412
Target Start/End: Original strand, 13711564 - 13711635
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatc 412  Q
    ||||||||||| ||||| ||| |||| || |||| |||| |||||||| | |||||||||||||||||||||    
T  13711564 catcaaaagtttagtccacatggtatcatcaattcatcagattaacaagaatacatttaatctaattttatc 13711635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 19289426 - 19289332
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||| ||| |||| ||||| || || | |||| ||||| || |||||| |||||||||||||||||||| || || ||| ||||||||    
T  19289426 catcaaaagttaagttctcacagtatcatcaactcatcagattaataagactacacttaatctaattttatcctacattgttataaatgtaacat 19289332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 41051312 - 41051263
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaac 386  Q
    |||||||||||||||||||||||||||||| || |||| |||| ||||||    
T  41051312 gtggcatcaaaagttcagtcctcatagtatcatcaattcatcagattaac 41051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 19501839 - 19501768
Alignment:
Q  344 caaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctac 416  Q
    |||||||||||||   ||||||| || |||| |||| ||||||||| ||||||||||||||||||||| ||||    
T  19501839 caaaagttcagtctctatagtatcatcaattcatcagattaacaaa-ctacatttaatctaattttattctac 19501768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 31861953 - 31862021
Alignment:
Q  342 atcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaatttta 410  Q
    ||||||| ||||||| | ||||||| || |||| |||| |||||||| |||||| ||||||||||||||    
T  31861953 atcaaaatttcagtcattatagtatcatcaattcatcagattaacaagactacacttaatctaatttta 31862021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 434
Target Start/End: Original strand, 41465602 - 41465694
Alignment:
Q  342 atcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||  ||| ||| || |||| || | ||| |||| |||  | ||||||||||||||| ||||||| ||||||||||||||    
T  41465602 atcaaaagttcagtccctataatatcatcaattcattagattcacaagactgaacttaatctaattttattctaccttgttttaagtgtaaca 41465694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 44913781 - 44913856
Alignment:
Q  359 catagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||| || |||| |||| | |||||| | |||| |||||||||||||||| ||| || ||||||||||||||    
T  44913781 catagtatcatcaattcatcagactaacaagaatacacttaatctaattttatcatacattgttttaagtgtaaca 44913856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 18258334 - 18258297
Alignment:
Q  397 ttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||| || ||||||||||||||    
T  18258334 ttaatctaattttatcctacatttttttaagtgtaaca 18258297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 9e-34; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 25691634 - 25691537
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||| |||||||| || |||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25691634 gtggcatcaacagttcagttcttatagtattatcaattcatcatattaacaaaaatacatttaatctaattttatcctaccttattttaagtgtaaca 25691537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 8861356 - 8861453
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| ||||| |||||||| || |||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  8861356 gtggcatcaaaagttaagtccccatagtatcatcaattaatcagattaacaacaatacatttaatctaattttatcctaccttattttaagtgtaaca 8861453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 342 - 434
Target Start/End: Original strand, 27283820 - 27283912
Alignment:
Q  342 atcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| |||| | ||||||||||||||||||||||| || |||||||||||    
T  27283820 atcaaaagttcagtcctcatagtattatcaatttatcagattaacaagactatacttaatctaattttatcctaccttgttataagtgtaaca 27283912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 5657571 - 5657474
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||| ||||||||| || |||| ||||||||||||||| |||| ||||| |||||||||||||| || ||||||||||||||    
T  5657571 gtggcatcaaaagttcagtcttcatagtatcatcaattcatcatattaacaaaaatacacttaatttaattttatcctactttgttttaagtgtaaca 5657474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 27421465 - 27421372
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||| ||| ||| || ||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||    
T  27421465 catcaaaagttcagtcct-ataatatcataaatttatcagattaacaagaatacacttaatctaattttatcctaccttattttaagtgtaacat 27421372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 341 - 419
Target Start/End: Original strand, 30055602 - 30055680
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  30055602 catcaaaagttcagtcctcatagtatcattaattcatcagattaacaagactacacttaatctaattttatcctacctt 30055680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 21991711 - 21991804
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  21991711 catcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 21991804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 22687310 - 22687407
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||||||||| |||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  22687310 gtggtatcaaaagttcagtccccatagtatcatcaattcatcagattaacaataatacacttaatctaattttatcctaccttgttttaagtgtaaca 22687407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 11071281 - 11071372
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    ||||||||||||||| |||||||||| || |||| |||| |||||||| |||||  ||||||||||||||||||||||| ||||||||||||    
T  11071281 catcaaaagttcagttctcatagtatcatcaattcatcagattaacaacactacgcttaatctaattttatcctaccttgttttaagtgtaa 11071372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 12390716 - 12390623
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||  |||| ||||||||||| |||| |||| |||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||    
T  12390716 catcaaaagttatgtccccatagtattatcaattcatcagattaacaagactacacttaatctaattttattctaccttcttttaagtgtaaca 12390623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 18797402 - 18797495
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| |||||||||||| || || | |||| |||||||| |||||| ||||||||||||||||||||||| || |||||||||||    
T  18797402 catcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcctaccttgttataagtgtaaca 18797495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 26980394 - 26980491
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||| |||| ||| || |||| |||| |||||||| | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  26980394 gtggcatcaaaagttcagtccccataatatcatcaattcatcaaattaacaagaatacacttaatctaattttattctaccttgttttaagtgtaaca 26980491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 430
Target Start/End: Original strand, 29173615 - 29173704
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgt 430  Q
    |||||||||||||||||||||||||| || |||| |||| | |||||| | |||| ||||||||||||||||||||||| ||||||||||    
T  29173615 catcaaaagttcagtcctcatagtatcatcaattcatcaaactaacaagaatacacttaatctaattttatcctaccttgttttaagtgt 29173704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 31579150 - 31579057
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||||||| || |||| |||| |||||||| |||||| ||||||||||||||||||||||| || ||||| |||||    
T  31579150 catcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttataagtataaca 31579057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 41765168 - 41765071
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||| ||||||||||||||| || |||| |||| |||||||| ||| || ||||||||||||||  ||||||| ||||||||||||||    
T  41765168 gtggcatcaaaagtccagtcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttactctaccttgttttaagtgtaaca 41765071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 44598737 - 44598834
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||| |||| ||| |||||||| || |||| |||| |||||||| | |||||||||||||||||||| ||||||| ||||||||||||||    
T  44598737 gtggcatcaaaaattcaatccccatagtatcataaattcatcagattaacaagaatacatttaatctaattttattctaccttgttttaagtgtaaca 44598834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 48928649 - 48928557
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||||||| | | || |||||||||||||||||||| |||||||||||||||||    
T  48928649 catcaaaagttcagtcc-catagtattatcaattcatcagattaacaagattgcacttaatctaattttatcctacattattttaagtgtaaca 48928557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 434
Target Start/End: Original strand, 37704241 - 37704325
Alignment:
Q  350 ttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||| |||||||| || ||||||||| |||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||    
T  37704241 ttcagtccccatagtatcatcaatttatcagattaacaagactacacttaatttaattttatcctaccttgttttaagtgtaaca 37704325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 43686112 - 43686208
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||  ||||||| |  |||| |||| | |||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  43686112 tggcatcaaaagttcagtccctatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaaca 43686208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 37347097 - 37347188
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    |||||||||||||||||||||||||| || ||||||| | |||||||  |||||| |||||||||||||||| ||| || ||||||||||||    
T  37347097 catcaaaagttcagtcctcatagtatcatcaatttattaaattaacaggactacacttaatctaattttatcatacattgttttaagtgtaa 37347188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 4582994 - 4583087
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| |  |||| |||| | |||||| | ||||||||||||||||||||||||| || ||||||||||||||    
T  4582994 catcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctactttgttttaagtgtaaca 4583087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 7334869 - 7334962
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| |||||||||| || || | ||||  ||||||| |||||| ||||||||||||||||||||||| || |||||||||||    
T  7334869 catcaaaagttcagttctcatagtatcatcaactcatcagcttaacaagactacacttaatctaattttatcctaccttgttataagtgtaaca 7334962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 9355912 - 9355819
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| ||| |||||| |||  |||||| |||| |||||||| |||||| |||||||||||| |||||||||| ||||||||||||||    
T  9355912 catcaaaagtttagttctcatattatcgttaattcatcagattaacaagactacacttaatctaatttcatcctaccttgttttaagtgtaaca 9355819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 15612849 - 15612752
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||  ||| ||| || |||| |||| |||||||| | |||| ||||| ||||||||||||||||| ||||||||||||||    
T  15612849 gtggcatcaaaagttcagtccctataatatcatcaattcatcagattaacaagaatacacttaatttaattttatcctaccttgttttaagtgtaaca 15612752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 24211813 - 24211910
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||||||||| ||||||||||| || |||| ||||  ||||||| |||||| ||||| |||||||||| |||||| || ||||||||||||    
T  24211813 tggcatcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatcataccttgttctaagtgtaacat 24211910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 31520809 - 31520717
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| || | |||||||| |||||| |||||||||||||||| |||||| ||||||||||||||    
T  31520809 catcaaaagttcagtcc-catagtatcatcaattcattaaattaacaagactacacttaatctaattttatcataccttgttttaagtgtaaca 31520717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 32432527 - 32432620
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||  |||||||| || |||| |||| | |||||| | |||| ||||| ||||||||||||||||||||||||||||||||    
T  32432527 catcaaaagttcagtctccatagtatcatcaattcatcagactaacaagaatacagttaatataattttatcctaccttattttaagtgtaaca 32432620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 32593278 - 32593182
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||||| ||| ||||| || |||| |||| |||| ||||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  32593278 gtggtatcaaaagttcagtc-tcacagtatcatcaattcatcagattatcaaaactgcatttaatctaattttatcataccttgttttaagtgtaaca 32593182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 38258620 - 38258713
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| |||||||||||| || |||| |||| |||||||| ||| || ||||||||||||||||||||||| || |||| ||||||    
T  38258620 catcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttataagcgtaaca 38258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 48928382 - 48928290
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||||||| | | || |||||||||||||||||||| || ||||||||||||||    
T  48928382 catcaaaagttcagtcc-catagtattatcaattcatcagattaacaagattgcacttaatctaattttatcctacattgttttaagtgtaaca 48928290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 32821142 - 32821046
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||| |||||| || |||| || | |||||||| |||||| ||||| || |||||||||||||| ||||||| ||||||    
T  32821142 tggcatcaaaagttcagtcctcgtagtatcatcaattcattagattaacaagactacagttaatttagttttatcctaccttgttttaagcgtaaca 32821046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 434
Target Start/End: Original strand, 6546612 - 6546687
Alignment:
Q  359 catagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||| || |||| |||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  6546612 catagtatcatcaattcatcagattaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaaca 6546687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 33688352 - 33688255
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||   ||||||| || |||| |||| |||||||| | |||| |||||||||||||||| ||| || ||||||||||||||    
T  33688352 gtggcatcaaaagttcagtctctatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcatactttgttttaagtgtaaca 33688255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 10481680 - 10481773
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||| ||||||| | ||||||| || |||| |||| |||||||| |||||  |||||||||||||||| |||||| || |||||||||||    
T  10481680 catcaaaaattcagtctttatagtatcatcaattcatcagattaacaagactacgcttaatctaattttatcttaccttgttataagtgtaaca 10481773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 12165823 - 12165920
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| |||||    ||||| || |||| |||| |||||||| | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  12165823 gtggcatcaaaagttaagtcccttaagtatcatcaattcatcagattaacaagaatacacttaatctaattttattctaccttgttttaagtgtaaca 12165920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 434
Target Start/End: Complemental strand, 44413464 - 44413372
Alignment:
Q  342 atcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| |||  ||||||||  | |||| |||| ||||||||  ||||| |||||||||||||||| |||||| ||||||||||||||    
T  44413464 atcaaaagttcggtctccatagtatcttcaattcatcaaattaacaaggctacacttaatctaattttatcataccttgttttaagtgtaaca 44413372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 434
Target Start/End: Complemental strand, 15672830 - 15672755
Alignment:
Q  359 catagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||| || |||| |||| | |||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  15672830 catagtatcatcaattcatcagactaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 15672755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 26524417 - 26524366
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaa 388  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  26524417 gtggcatcaaaagtccagtcctcatagtatcatcaatttatcatattaacaa 26524366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 10359300 - 10359207
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaa-tctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| | ||||||| || |||| |||| || ||||| |||||| |||| |||||||||||| |||||| ||||||||||||||    
T  10359300 catcaaaagttcagtc-tgatagtatcatcaattcatcagatcaacaagactacacttaaatctaattttatcataccttgttttaagtgtaaca 10359207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 37703549 - 37703490
Alignment:
Q  376 atcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||| ||||| || |||||| |||||||||||||||| || |||||||||||||||||||    
T  37703549 atcagattaataagactacacttaatctaattttatcatatcttattttaagtgtaacat 37703490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 434
Target Start/End: Complemental strand, 26588119 - 26588077
Alignment:
Q  392 tacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  26588119 tacacttaatctaattttatcctaccttgttttaagtgtaaca 26588077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 415
Target Start/End: Original strand, 37109947 - 37110021
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatccta 415  Q
    |||||||||||||||| | ||| ||| || |||| |||| |||||||| |||||| ||||| |||||||||||||    
T  37109947 catcaaaagttcagtcattataatatcatcaattcatcagattaacaagactacacttaatataattttatccta 37110021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 43925177 - 43925269
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||  |||||||| || || | |||| | |||||| | |||| |||||||||||||||| |||||| ||||||||| ||||    
T  43925177 catcaaaagttcagtctacatagtatcatcaact-atcagactaacaataatacacttaatctaattttatcataccttgttttaagtgcaaca 43925269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 415
Target Start/End: Complemental strand, 17842672 - 17842598
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatccta 415  Q
    ||||||||| |||||| | ||| ||| || |||| |||| |||||||| |||||| ||||| |||||||||||||    
T  17842672 catcaaaagctcagtcattataatatcatcaattcatcagattaacaagactacacttaatataattttatccta 17842598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 434
Target Start/End: Original strand, 38053588 - 38053646
Alignment:
Q  376 atcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||| |||||| |||||||||||||||| ||| || || |||||||||||    
T  38053588 atcaaattaacaagactacacttaatctaattttatcatactttgttataagtgtaaca 38053646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 411
Target Start/End: Original strand, 23111262 - 23111335
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttat 411  Q
    ||||||||||||||||  | || |||||| || |||| || | |||||||| |||||| |||||||||||||||    
T  23111262 tggcatcaaaagttcaaccatcgtagtatcatcaattcattagattaacaagactacacttaatctaattttat 23111335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 11357450 - 11357356
Alignment:
Q  340 gcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||||||| || |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11357450 gcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagactacatttaatctaattttatcctaccttattttaagtgtaaca 11357356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 37157794 - 37157891
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||| ||||||||| || ||||||| | |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||    
T  37157794 gtggcatcaaaagttcagtcatcatagtatcatcaatttataagattaacaagactacacttaatctaattttatcctaccttatttcaagtgtaaca 37157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 37203154 - 37203248
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgta 431  Q
    |||||||||||||||||||||||||||||| || |||| || | |||||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  37203154 gtggcatcaaaagttcagtcctcatagtatcatcaattcataagattaacaagactacacttaatctaattttatcctaccttatttttagtgta 37203248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 21193697 - 21193790
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||| |||| ||||||| |||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  21193697 catcaaaagttcagtccccatggtatcattaattcatcagattaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaaca 21193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 33378870 - 33378777
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||||||| ||| || ||||||||||||||||||||||| ||||||||||||||    
T  33378870 catcaaaagttcagtccccatagtattatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttttaagtgtaaca 33378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 340 - 433
Target Start/End: Complemental strand, 53229238 - 53229145
Alignment:
Q  340 gcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaac 433  Q
    ||||||||||||||||| ||||| ||| || |||| |||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  53229238 gcatcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacagttaatctaattttatcctaccttattttaagtgtaac 53229145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 337 - 432
Target Start/End: Complemental strand, 52041011 - 52040916
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    |||||||||||||||||||| ||||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||    
T  52041011 gtggcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcctaccttgttttaagtgtaa 52040916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 22451055 - 22451152
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||| |||||||| || |||| ||||||||||||| ||| || |||||||||||||| | |||||| ||||||||||||||    
T  22451055 gtggcatcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatctaattttaccttaccttgttttaagtgtaaca 22451152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 27480464 - 27480371
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| ||||||||||||| ||| || |||||||||||||||||||| || ||||||||||||||    
T  27480464 catcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatctaattttatcctacattgttttaagtgtaaca 27480371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 44186586 - 44186493
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| |||| |||||||||| |||| ||||||||||||||||||||||| |||||| |||||||    
T  44186586 catcaaaagttcagtccccatagtatcatcaattcatcaaattaacaaaaatacacttaatctaattttatcctaccttgttttaaatgtaaca 44186493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 44891584 - 44891681
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| ||||| |||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  44891584 gtggcatcaaaagtttagtccacatagtatcatcaattaatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 44891681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 337 - 432
Target Start/End: Original strand, 11466911 - 11467006
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    ||||||||||||||| ||||| |||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||    
T  11466911 gtggcatcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaa 11467006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 26941345 - 26941254
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    ||||||||||||||||||||| |||| ||||||| |||| |||||||| |||||| ||||||||||||||||||||||| || |||| ||||    
T  26941345 catcaaaagttcagtcctcatggtatcattaattcatcagattaacaagactacacttaatctaattttatcctaccttgttataagcgtaa 26941254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 42506160 - 42506082
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  42506160 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctacctt 42506082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 4015551 - 4015644
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||| | || | ||| |||||||||||||||| || ||||||||||||||    
T  4015551 catcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagaatataattagtctaattttatcctacattgttttaagtgtaaca 4015644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 39282739 - 39282836
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||| |||||| ||| ||  ||| |||| |||||||| |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  39282739 gtggcatcaaaagttcagttctcatattatcatccattcatcagattaacaagactacacttaatctaattttatcctaccttgtttcaagtgtaaca 39282836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 3362340 - 3362439
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatt--taatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||||| |||| || |||| ||||| ||||||| |||||| |  |||||||||||||||||||||||||||||||| ||||    
T  3362340 gtggcatcaaaagttcactcctcatggtatcatcaattcatcatgttaacaagactacactattaatctaattttatcctaccttattttaagtgaaaca 3362439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 51213069 - 51212973
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||| |||||||||||||| || || | |||| |||||||| |||||| ||||| ||||||||||||||||| || |||||||||||    
T  51213069 tggcatcaaaagttgagtcctcatagtatcatcaactcatcagattaacaagactacacttaatataattttatcctaccttgttataagtgtaaca 51212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 352 - 434
Target Start/End: Complemental strand, 11835702 - 11835619
Alignment:
Q  352 cagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaat-tttatcctaccttattttaagtgtaaca 434  Q
    |||||| |||||||| || |||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||    
T  11835702 cagtccccatagtatcatcaatttatcatattaacaaaaatacacttaatctaatatttatcctaccttgttttaagtgtaaca 11835619  T

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Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 45174595 - 45174690
Alignment:
Q  340 gcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||| |||||||| || |||| |||| |||||||| | |||||||||| ||| |||||||||||||| ||||||||||||||    
T  45174595 gcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacatttaatttaatttttatcctaccttgttttaagtgtaaca 45174690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 3655287 - 3655209
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| | |||| |||||||||||||||||||||||    
T  3655287 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctacctt 3655209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 344 - 434
Target Start/End: Original strand, 29163912 - 29164002
Alignment:
Q  344 caaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| |||||| || |||| |||| ||||| || | |||| ||||||||||||||||||||||| ||||||||||||||    
T  29163912 caaaagttcagtcctcttagtatcatcaattcatcagattaataagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 29164002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 43348345 - 43348442
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||||| |  |||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| |||||||||||||||    
T  43348345 gtggcatcaaaagttcagtcttt-tagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaacat 43348442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 54828786 - 54828692
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||| |||| || |||||| || || |||| ||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  54828786 catcaaaaattcattcttcatagcatcatcaattcatcatatgaacaagactacacttaatctaattttatcctaccttattataagtgtaacat 54828692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 4761734 - 4761641
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || || | |||  |||||||| |||||| ||||||||||||||||||||||| || ||||| |||||    
T  4761734 catcaaaagttcagtcctcatagtatcatcaactcatctgattaacaagactacacttaatctaattttatcctaccttgttataagtataaca 4761641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 25579830 - 25579923
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||| ||| || | ||||| | |||||||||| |||| ||||||||||||||||||||||| |||| |||||||||    
T  25579830 catcaaaagttcagtccccatattatcatcagtttattagattaacaaaaatacacttaatctaattttatcctaccttgtttttagtgtaaca 25579923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 48355029 - 48355126
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||| |||||||||| || || | |||| |||||||| |||||| ||| ||||||||||||||||||| || ||| ||||||||    
T  48355029 tggcatcaaaagttcagttctcatagtatcatcaactcatcagattaacaagactacacttagtctaattttatcctaccttgttataaatgtaacat 48355126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 53176145 - 53176230
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaa 426  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| | |||| ||||||||||||||||| |||| |||||||    
T  53176145 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatccaacctcattttaa 53176230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 24708202 - 24708107
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactaca--tttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||||||| || |||| |||| |||||||| ||||||  ||| |||||||||||||||||||| ||| ||||||||||    
T  24708202 catcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttttgatctaattttatcctaccttgtttcaagtgtaaca 24708107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 46297850 - 46297754
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||||| | |||||| || |||| || | ||||||||||||||| |||||| || ||||||||||||| ||||||||||||||    
T  46297850 tggcgtcaaaagttcagtccccgtagtatcatcaattcattagattaacaaaactacacttaatcaaactttatcctaccttgttttaagtgtaaca 46297754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 341 - 433
Target Start/End: Complemental strand, 46994746 - 46994654
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaac 433  Q
    |||||||||||||||||||||||||| || || | ||   |||||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  46994746 catcaaaagttcagtcctcatagtatcatcaactcatatgattaacaagactacacttaatctaattttatcctaccttgttataagtgtaac 46994654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 20373381 - 20373303
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    ||||||||||||||| ||||| |||| || |||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  20373381 catcaaaagttcagttctcatggtatcatcaattcatcaaattaacaagactacacttaatctaattttatcctacctt 20373303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 22446154 - 22446056
Alignment:
Q  337 gtggcatcaaaagttcagtcc-tcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||  || ||||||||| || |||| ||||||| || || |||||| |||||||||||||||||||| || ||||||||||||||    
T  22446154 gtggcatcaaaagttcaaaccctcatagtatcatcaattcatcatataaataagactacacttaatctaattttatcctacattgttttaagtgtaaca 22446056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 32373557 - 32373655
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||||||||   ||  || |||| || |||| ||||||||||||| | |||| ||||||||||||||||||||||| |||||||||||||||    
T  32373557 gtggcatcaaaagttccaccccaatggtatcatcaattcatcatattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaacat 32373655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 38591786 - 38591880
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    |||||||||||||| ||||| |||| |||||| || | |||| |||||||| |||||| ||||||||||||||||||| ||| ||| ||||||||    
T  38591786 tggcatcaaaagttaagtccacatattattatcaactcatcagattaacaagactacacttaatctaattttatcctatcttgtttcaagtgtaa 38591880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 29099446 - 29099539
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||||| | |||||| || |||| ||||||||||||| | |||| ||||| |||||||||| | |||||||||||||||||||    
T  29099446 catctaaagttcagtccccttagtatcatcaattcatcatattaacaagaatacacttaatttaattttatcgtgccttattttaagtgtaaca 29099539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 2008020 - 2008114
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgta 431  Q
    ||||||||||||||||| ||| ||||| || || |||| |||| |||||||| | || | ||||||||||||||||||||||  |||||||||||    
T  2008020 gtggcatcaaaagttcaatccccatagcatcatcaattcatcagattaacaagaatatacttaatctaattttatcctacctcgttttaagtgta 2008114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 35844417 - 35844511
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| ||||| |||||||| || |||| |||| |||||||| | |||| ||||||||| |||||||||||||  ||||||||||||||    
T  35844417 catcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaatttttatcctacctagttttaagtgtaaca 35844511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 40552344 - 40552250
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||||||| ||| || |||| |||| |||||||| |||||| ||||| |||||||||| || ||| || |||| |||||||    
T  40552344 catcaaaagttcagtcctcataatatcatcaattcatcagattaacaacactacacttaatttaattttatcttagcttgttataagcgtaacat 40552250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 435
Target Start/End: Original strand, 1089809 - 1089878
Alignment:
Q  366 ttattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||| ||||||||| || ||||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  1089809 ttatcaatttatcagatcaacaggactacattaaatctaattttatcctaccttgttttaagtgtaacat 1089878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 24489047 - 24488954
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||| ||| || |||| |||| | |||||| | |||| |||||||||||||||| ||| || ||||||||||||||    
T  24489047 catcaaaagttcagtccccatattatcatcaattcatcagactaacaagaatacacttaatctaattttatcttacattgttttaagtgtaaca 24488954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 34133026 - 34133119
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||| ||| || |||| |||| | ||| || | |||| ||||| ||||||||||||||||| ||||||||||||||    
T  34133026 catcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaatataattttatcctaccttgttttaagtgtaaca 34133119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 40936082 - 40936174
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| ||  ||| |||| |||||||| | |||| ||||| ||||||||||| | ||| ||||||||||||||    
T  40936082 catcaaaagttcagtcctcatagtatcatctattcatcagattaacaagaatacacttaatataattttatcc-aactttttttaagtgtaaca 40936174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 43975973 - 43975880
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| | |||||||| ||| || |||| |||| |||||||||| | || |||||||||||||||| || ||| ||||||||||||||    
T  43975973 catcaaaagtttaatcctcataatatcatcaattcatcagattaacaaaattgcacttaatctaattttatcttatcttgttttaagtgtaaca 43975880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 434
Target Start/End: Complemental strand, 14586754 - 14586662
Alignment:
Q  342 atcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||  |||| | |||||| || |||| |||| |||||||| | |||| ||||||||| ||||||||||||| ||||||||||||||    
T  14586754 atcaaaagttttgtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaactttatcctaccttgttttaagtgtaaca 14586662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 362 - 434
Target Start/End: Original strand, 33698265 - 33698337
Alignment:
Q  362 agtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  33698265 agtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 33698337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 22622773 - 22622710
Alignment:
Q  371 aatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||| ||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||    
T  22622773 aattcatcagattaacaaaactacacttaatctaattttatcataccttgtttcaagtgtaaca 22622710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 47481613 - 47481699
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaag 427  Q
    ||||||||||| || ||||||||||| || |||| ||||| ||||||| |||||| ||||| |||||||||  ||||||||| ||||    
T  47481613 catcaaaagtttagccctcatagtatcatcaattcatcatgttaacaagactacacttaatataattttattataccttattctaag 47481699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 7327567 - 7327474
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| |||  |||||||| | |||| ||||| || |||||||||||||| |||  |||||||||    
T  7327567 catcaaaagttcagtccccatagtatcatcaattcatcggattaacaagaatacacttaatttatttttatcctaccttctttctagtgtaaca 7327474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 412
Target Start/End: Complemental strand, 21009887 - 21009816
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatc 412  Q
    |||||||||||||| ||||||| ||| || |||| ||||  ||||||| |||||| ||||| ||||||||||    
T  21009887 catcaaaagttcagccctcatattatcatcaattcatcaggttaacaagactacacttaatataattttatc 21009816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 11727119 - 11727216
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| ||| || |||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  11727119 gtggcatcaaaagttcagtcctcataatatcatcaattcatcaaattaacaagaatacatttaatctaattttatcctaccttattttaagtgtaaca 11727216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 5300041 - 5299944
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||| ||||||| || |||| |||| |||||||| | |||| ||||||||||||||||| ||||| ||||||||||||||    
T  5300041 gtggcatcaaaagttcagtccttatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatccaaccttgttttaagtgtaaca 5299944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 6098609 - 6098516
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||||||  | |||| |||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||    
T  6098609 catcaaaagttcagtccccatagtatcgtcaattcatcagattaacaagactacatttaatctaattttatcctatcttgttttaagtgtaaca 6098516  T

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Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 38644073 - 38644170
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||  |||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  38644073 gtggcatcaaaagttcagtctccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 38644170  T

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Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 340 - 435
Target Start/End: Complemental strand, 39099211 - 39099116
Alignment:
Q  340 gcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||||||||||||  | |||| |||| |||||||||| |||| |||||||||||||||| |||| | |||||||||||||||    
T  39099211 gcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaaaaatacacttaatctaattttatcttaccctgttttaagtgtaacat 39099116  T

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Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 41911080 - 41910986
Alignment:
Q  340 gcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||| |||||||  |||||||| || |||| |||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  41911080 gcatcaaaaattcagtcaacatagtatcatcaattcatcagattaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaaca 41910986  T

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Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 1205026 - 1205119
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || | || ||||||||||||| | |||| |||||||||||||||| |||||| ||||||| ||||||    
T  1205026 catcaaaagttcagtcctcatagtatcatcagttcatcatattaacaagattacacttaatctaattttatcttaccttgttttaagcgtaaca 1205119  T

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Target: chr8; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 12876208 - 12876301
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || |||| |||| ||||| ||   |||| ||||||||||||||||||||||||||||||| ||||||    
T  12876208 catcaaaagttcagtcctcatagtatcatcaattcatcagattaagaaggatacacttaatctaattttatcctaccttattttaagcgtaaca 12876301  T

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Target: chr8; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 13307722 - 13307815
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||| ||| | |||| |||||||||||||||||||| ||||||||| |||||||    
T  13307722 catcaaaagttcagtccccatagtattatcaattcatcagattagcaagaatacacttaatctaattttatcctactttattttaaatgtaaca 13307815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 27082933 - 27082836
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||| |||||||||||||||||||||| || |||| |||| |||||||| |||||| |||||||||||||||| |||| | |||||||| |||||    
T  27082933 gtggcattaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagactacacttaatctaattttatcttaccatgttttaagtctaaca 27082836  T

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Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 34895062 - 34895159
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||| ||||| ||| || |||| |||| |||||||| |||||| ||||||||||||||||| ||||| ||| ||||||||||    
T  34895062 gtggcatcaaaagttcagtcatcatactatcatcaattcatcagattaacaagactacacttaatctaattttatccaaccttgtttcaagtgtaaca 34895159  T

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Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 10555293 - 10555215
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    ||||||||||||| |||||||||||| || |||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  10555293 catcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctacctt 10555215  T

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Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 1150196 - 1150103
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||||||| || || | |||| |||||||| |||||| ||||||||||||||||||||||| || |||| ||||||    
T  1150196 catcaaaagttcagtcatcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcctaccttgttataagcgtaaca 1150103  T

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Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 16222962 - 16223047
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaa 426  Q
    |||||||||||||||||||||||||| || |||| |||  |||||||| |||||| |||||||||||||||||| |||| ||||||    
T  16222962 catcaaaagttcagtcctcatagtatcatcaattcatccgattaacaagactacacttaatctaattttatccttccttgttttaa 16223047  T

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Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 37970610 - 37970517
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||| ||||||||||| || |||| ||   |||||||| |||||| ||||||||||||||||||||||| || |||||||||||    
T  37970610 catcaaaagttcagccctcatagtatcatcaattcatatgattaacaagactacacttaatctaattttatcctaccttgttataagtgtaaca 37970517  T

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Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 16446969 - 16446873
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||| ||||| |||| ||| || |||| |||| |||||||| |||||| ||||| ||||||||||||||||| ||| ||||||||||    
T  16446969 tggcatcaaaagtttagtccccatactatcatcaattcatcagattaacaagactacacttaatttaattttatcctaccttgtttcaagtgtaaca 16446873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 40862516 - 40862611
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||| |||| |||| || ||||| ||||| |||||||| |||| |||||||||||||||||||| || || |||||||||||    
T  40862516 tggcatcaaaagttcagtc-tcatggtatcatcaatttttcatactaacaaaaatacacttaatctaattttatcctactttgttctaagtgtaaca 40862611  T

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Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 1954085 - 1953986
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtat-tattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||| ||||||||||| ||| |||| |||| ||||| |  |||||| | |||||||||||||| |||||| |||||||||||||||    
T  1954085 gtggcatcaaaagttcagccctcatagtatctatcaattcatcagattaatatgactacactaaatctaattttatcataccttgttttaagtgtaacat 1953986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 41362614 - 41362708
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||| ||||||||||| || |||| |||| |||||||| |||| | || || |||||||||| |||||| |||||||||||||||    
T  41362614 catcaaaagttcagacctcatagtatcatcaattcatcagattaacaagactaaacttgatataattttatcataccttgttttaagtgtaacat 41362708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 430
Target Start/End: Original strand, 44869596 - 44869686
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaagtgt 430  Q
    ||||||||||||| || ||||||||| || ||||||||| |||||||| | |||| ||||||||| |||||||||||||| ||||||||||    
T  44869596 catcaaaagttcaatcgtcatagtatcatcaatttatcagattaacaataatacacttaatctaatttttatcctaccttgttttaagtgt 44869686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 465937 - 466034
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||| |||||||| | |||||| || |||| |||| |||||||| | |||| |||||||||||||||| ||| || ||||||||||||||    
T  465937 gtggcatcaaaaattcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcttacattgttttaagtgtaaca 466034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 1149723 - 1149630
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||| ||||||||||||| || || | |||| |||||||| |||||| |||||||||||||||| |||||| || |||| ||||||    
T  1149723 catcaaaagttctgtcctcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcttaccttgttataagcgtaaca 1149630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 23854522 - 23854429
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || || | || | |||||||| |||||| |||||||||||||||| |||||  || |||||||||||    
T  23854522 catcaaaagttcagtcctcatagtatcatcaactcattagattaacaatactacaattaatctaattttatcttacctagttataagtgtaaca 23854429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 33906316 - 33906405
Alignment:
Q  346 aaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||| ||||||||| || |||| |||| |||||||| ||| || |||||||||||||||| |||||| ||||||| |||||||    
T  33906316 aaagttcagtcttcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcataccttgttttaagggtaacat 33906405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 36695057 - 36694964
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| |||| | ||| || | |||| |||||||||||||||||||| || ||||||||||||||    
T  36695057 catcaaaagttcagtccccatagtatcatcaattcatcagactaagaagaatacacttaatctaattttatcctacattgttttaagtgtaaca 36694964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 35459798 - 35459708
Alignment:
Q  345 aaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||| ||| || || | |||| |||||||| |||||| |||||||||||||||||||| || || ||| ||||||||    
T  35459798 aaaagttcagtcctcataatatcatcaactcatcagattaacaagactacacttaatctaattttatcctactttgttataaatgtaacat 35459708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 9864247 - 9864340
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||| ||| || |||| |||| | ||| || | |||| ||||| ||||||||||||||||| ||||||||||||||    
T  9864247 catcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaatataattttatcctaccttgttttaagtgtaaca 9864340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 34952122 - 34952029
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||   |||||| || |||| |||| ||||| || | |||| |||||||||||||||||||| || ||||||||||||||    
T  34952122 catcaaaagttcagtccctttagtatcatcaattcatcaaattaataagaatacacttaatctaattttatcctactttgttttaagtgtaaca 34952029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 31933977 - 31933899
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||| | ||||||| || |||| |||  |||||||| |||||| |||||||||||||||| ||||||    
T  31933977 catcaaaagttcagtcattatagtatcatcaattcatccgattaacaagactacacttaatctaattttatcatacctt 31933899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 392 - 434
Target Start/End: Original strand, 43025852 - 43025894
Alignment:
Q  392 tacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  43025852 tacatttaatctaattttatcctaccttattttaactgtaaca 43025894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 43643686 - 43643593
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||| || ||||||||| || || | |||| |||||||| |||||| || |||||||||||||||||||| || |||| ||||||    
T  43643686 catccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatctaattttatcctaccttgttataagcgtaaca 43643593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 7891051 - 7890955
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| ||||||||| ||| || |||| |||| |||||||| |||||| | |||||| ||||||| ||| || || |||| ||||||    
T  7891051 tggcatcaaaagttcggtcctcataatatcatcaattcatcagattaacaagactacactcaatctagttttatcttactttgttataagcgtaaca 7890955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 435
Target Start/End: Original strand, 18259233 - 18259276
Alignment:
Q  392 tacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  18259233 tacatttaatttaattttatcataccttattttaagtgtaacat 18259276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Complemental strand, 4132746 - 4132684
Alignment:
Q  371 aatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||| |||||||| |||||| ||||||||||||||| |||||||  |||||||||||||    
T  4132746 aattcatcaaattaacaagactacacttaatctaattttattctacctt-gtttaagtgtaaca 4132684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 434
Target Start/End: Original strand, 7998428 - 7998487
Alignment:
Q  376 atcatattaacaaaactacatttaatctaatttt-atcctaccttattttaagtgtaaca 434  Q
    |||| |||||||| | |||| ||||||||||||| |||||||||| ||||||||||||||    
T  7998428 atcagattaacaagaatacacttaatctaatttttatcctaccttgttttaagtgtaaca 7998487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 30654674 - 30654581
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||| | ||||||||| || | || ||||  ||||||| |||||| ||||| |||||||| | ||| || ||||||| ||||||    
T  30654674 catcaaaagttcagccttcatagtatcatcacttcatcaggttaacaagactacacttaatttaattttaccatacattgttttaagcgtaaca 30654581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 365
Target Start/End: Complemental strand, 4133105 - 4133077
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagta 365  Q
    |||||||||||||||||||||||||||||    
T  4133105 gtggcatcaaaagttcagtcctcatagta 4133077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 14919603 - 14919510
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || || | |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  14919603 catcaaaagttcagtcctcatagtatcatcaactcatcatattaacaaaactacacttaatctaattttatcctaccttattataagtgtaaca 14919510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 24886204 - 24886297
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || || | ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  24886204 catcaaaagttcagtcctcatagtatcatcaactcatcatattaacaagactacacttaatctaattttatcctaccttattataagtgtaaca 24886297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 9200333 - 9200427
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||| ||||||| |||||| || |||| ||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||    
T  9200333 catcaaaagtttagtcctcttagtatcatcaattcatcatattaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaacat 9200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 22980893 - 22980986
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| |||| |||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  22980893 catcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttttaagtgtaaca 22980986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 23954868 - 23954771
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||   |||||||| || |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  23954868 gtggcatcaaaagttcagtttccatagtatcatcaattcatcatattaacaagactacacttaatctaattttatcctaccttgttttaagtgtaaca 23954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 1429223 - 1429127
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| |||||||  |||||||| || |||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  1429223 tggcatcaaaaattcagtctccatagtatcatcaattcatcaaattaacaagactacatttaatctaattttatcctaccttgttttaagtgtaaca 1429127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 39572919 - 39573013
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||||||| |||||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| |||||||||||||||    
T  39572919 catcaaaagttcagttctcatagtatcataaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaacat 39573013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 699250 - 699343
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||| ||| || |||| |||| |||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  699250 catcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacacttaatctaattttatcataccttattttaagtgtaaca 699343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 12910455 - 12910548
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||||  | |||| |||| |||||||  |||||| ||||||||||||||||||||||| ||||||||||||||    
T  12910455 catcaaaagttcagtcctcatagtatcgtcaattcatcagattaacatgactacacttaatctaattttatcctaccttgttttaagtgtaaca 12910548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 27318562 - 27318469
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| ||| |||| ||||| || |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||    
T  27318562 catcaaaagtttagttctcacagtatcatcaattcatcatattaacaagactacacttaatctaattttatcctaccttattttaagcgtaaca 27318469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 30969399 - 30969306
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| | |||| |||||||||||||||||||| || ||||||||||||||    
T  30969399 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctactttgttttaagtgtaaca 30969306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 31786725 - 31786628
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||||||| || |||| |||| |||||||| ||| || ||||||||||||||||||| ||| ||||||||||||||    
T  31786725 gtggcatcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctatcttgttttaagtgtaaca 31786628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 21088841 - 21088747
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||||||||| |||||||| |  |||| |||||| |||||| | |||||||||||||| ||||||||||||| |||||||||||||||    
T  21088841 catcaaaagttcagtccccatagtatcaacaattcatcatactaacaagaatacatttaatctaactttatcctaccttgttttaagtgtaacat 21088747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 22019732 - 22019825
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| ||||| | |||||| || | || ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  22019732 catcaaaagttaagtccccttagtatcatcacttcatcatattaacaagaatacacttaatctaattttatcctaccttattttaagtgtaaca 22019825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 33908329 - 33908426
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||||||| || ||||  ||| |||||||| ||| || |||||||||||||||| |||||| |||||| |||||||    
T  33908329 gtggcatcaaaagttcagtcctcatagtatcatcaattattcagattaacaagactgcacttaatctaattttatcataccttgttttaaatgtaaca 33908426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 433
Target Start/End: Complemental strand, 14409405 - 14409310
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaac 433  Q
    |||||||||||||||||||| ||||||||| || |||| |||| |||||||| ||| || ||||||||||||||| ||||||| |||||||||||||    
T  14409405 gtggcatcaaaagttcagtc-tcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttattctaccttgttttaagtgtaac 14409310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 36866859 - 36866955
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||  ||||||| |  |||| |||| | |||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  36866859 tggcatcaaaagttcagtcccgatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaaca 36866955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 40133482 - 40133578
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||| |||| ||| |  |||| |||| | |||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  40133482 tggcatcaaaagttcagtccccataatatcaacaattcatcagactaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaaca 40133578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 43308730 - 43308634
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||||||| || || | ||||  |||||||||||| | |||||||||||||||| |||||| || |||||||||||    
T  43308730 tggcatcaaaagttcagtcctcatagtatcatcaactcatcagcttaacaaaactatacttaatctaattttatcttaccttgttataagtgtaaca 43308634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 36860523 - 36860617
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacc-ttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| |  |||| |||||| |||||| | |||||||||||||||||||||||||| || ||||||||||||||    
T  36860523 catcaaaagttcagtccccatagtatcaacaattcatcatactaacaagagtacatttaatctaattttatcctaccttttttttaagtgtaaca 36860617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 32563249 - 32563342
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| | || ||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  32563249 catcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 32563342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 8741964 - 8741868
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||  |||||||| || |||| |||| |||||||| | |||| ||||||||||||| || |||||| ||||||||||||||    
T  8741964 tggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacaattaatctaattttgtcataccttgttttaagtgtaaca 8741868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 27330401 - 27330497
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||| ||||||||| || |||| |||| |||||  | | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  27330401 tggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatctaattttattctaccttgttttaagtgtaaca 27330497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 432
Target Start/End: Complemental strand, 5112392 - 5112297
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    ||||||||||||||||||||| |||||||| || |||| || | |||||||| |||| | |||||||||||||||| |||| | ||||||||||||    
T  5112392 gtggcatcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactatacttaatctaattttatcataccatgttttaagtgtaa 5112297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 7208938 - 7208861
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    ||||||||||||||||||| |||||| || |||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  7208938 catcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctacctt 7208861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 434
Target Start/End: Complemental strand, 6824546 - 6824461
Alignment:
Q  349 gttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||| ||||||||| || ||||||||| |||||||| | |||| |||||||||||||||| |||||| |||||| |||||||    
T  6824546 gttcagtcttcatagtatcatcaatttatcagattaacaagaatacacttaatctaattttatcataccttgttttaaatgtaaca 6824461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 23116301 - 23116204
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||||   |||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||| ||||||||||    
T  23116301 gtggaatcaaaagttcagtttacatagtatcatcaattcatcagattaacaatattacacttaatctaattttatcctaccttgtttcaagtgtaaca 23116204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 26268174 - 26268267
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| ||||| |||||||| || |||| |||| |||||||| | |||| |||||| ||||||||| |||||| ||||||||||||||    
T  26268174 catcaaaagtttagtccacatagtatcatcaattcatcagattaacaagaatacaattaatcaaattttatcataccttgttttaagtgtaaca 26268267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 35504465 - 35504558
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| || | ||||||| || |||| ||||||||||||| |||||| ||||| ||||||||||||||| |||| |||| ||||||    
T  35504465 catcaaaagttcaatcattatagtatcatcaattcatcatattaacaagactacacttaatataattttatcctaccatattataagcgtaaca 35504558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 35511552 - 35511459
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||| ||| |  |||| |||| |||||||| |||||| ||||||||||||||||| ||||| ||| ||||||||||    
T  35511552 catcaaaagttcagtcatcatactatcaccaattcatcagattaacaagactacacttaatctaattttatccaaccttgtttcaagtgtaaca 35511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 38528311 - 38528219
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||||||| || |||| |||| |||||||| ||| || |||||||||||||||| |||||| ||| ||||||||||    
T  38528311 catcaaaagttcagtc-tcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcttaccttgtttcaagtgtaaca 38528219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 5837655 - 5837746
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    |||||||| |||||||  |||||||| || |||| ||||||||||||| | |||| |||||||||||| ||||||| || ||||||||||||    
T  5837655 catcaaaatttcagtctccatagtatcatcaattcatcatattaacaagaatacacttaatctaatttaatcctacattgttttaagtgtaa 5837746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 31705686 - 31705593
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||| |||||||| |||||| || |||| |||| |||||||| |||||| |||||||||||||||| |||||| || |||| |||||||    
T  31705686 catcaaaagtccagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatcataccttgttataagcgtaacat 31705593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 35933991 - 35934089
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatcta-attttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||| |||||  |||||||| || |||| |||| |||||||| | |||| ||||||||  |||||||||||||| ||||||||||||||    
T  35933991 gtggcatcaaaagtccagtcaccatagtatcatcaattcatcagattaacaagaatacacttaatctagtttttatcctaccttgttttaagtgtaaca 35934089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 7693326 - 7693423
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||| |||||| || |||| || | |||||||  | |||  |||||||||||||||| |||||| ||||||||||||||    
T  7693326 gtggcatcaaaagttcaatcctcttagtatcatcaattcattagattaacatgaatacgcttaatctaattttatcttaccttgttttaagtgtaaca 7693423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 8466840 - 8466937
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||||| ||| |||||||| || |||| |||| |||||||| | |||| ||||| ||||||||| ||||||| |||||| |||||||    
T  8466840 gtggtatcaaaagttcaatccccatagtatcatcaattcatcaaattaacaagaatacacttaatttaattttattctaccttgttttaaatgtaaca 8466937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 19119959 - 19120052
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||| | || |||| |||| |||||||| | || | ||| ||||||||||||||||||| |||||||| |||||    
T  19119959 catcaaaagttcagtccccatagtgtcatcaattcatcagattaacaagaataaacttactctaattttatcctaccttgttttaagtataaca 19120052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 22255279 - 22255356
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatccta 415  Q
    |||||||||||||||||| |||||| ||| || |||| |||| |||||||| |||||| |||||||||||||| ||||    
T  22255279 tggcatcaaaagttcagttctcatattatcatcaattcatcagattaacaagactacacttaatctaattttagccta 22255356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 25501001 - 25500908
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| |||||  ||||||| || |||| |||| |||||||| | || | ||||| ||||||||||||||||| ||||||||||||||    
T  25501001 catcaaaagttaagtccctatagtatcatcaattcatcagattaacaagaataaacttaatttaattttatcctaccttgttttaagtgtaaca 25500908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 35826558 - 35826466
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || | || || | |||||||| || ||||||||||||||||||| |||| || ||||||| ||||||    
T  35826558 catcaaaagttcagtcctcatagtatcatcagttcat-agattaacaataccacatttaatctaattttattctacattgttttaagcgtaaca 35826466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 15992615 - 15992537
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||| ||||||||| || |||| |||| |||||||| | |||| || |||||||||||| |||||||    
T  15992615 catcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagaatacacttgatctaattttattctacctt 15992537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 17158105 - 17158013
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||| ||| | ||||||| ||||||| |||| |||||||| |||||| ||| | ||||| |||| ||||||||| |||||||||||    
T  17158105 catcaaaagttc-gtcattatagtatcattaattcatcagattaacaagactacacttagtataattgtatcttaccttattataagtgtaaca 17158013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 28416606 - 28416509
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||||| ||  | || ||| || |||| |||| |||||||| | |||| ||||||||||||||| || |||||||||||||||||||    
T  28416606 gtggaatcaaaagttcaatctccttaatatcatcaattcatcagattaacaagaatacacttaatctaattttattctgccttattttaagtgtaaca 28416509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 434
Target Start/End: Original strand, 15724594 - 15724681
Alignment:
Q  346 aaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||| |||| ||| || |||| |||| |||||||| | |||| ||||| ||||||||| |||||||||||||||| |||||    
T  15724594 aaagttcagtcc-cataatatcatcaattcatcaaattaacaagaatacacttaatttaattttattctaccttattttaagtataaca 15724681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 22974157 - 22974064
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| | |||||| ||| || || | |||| | |||||| |||||| ||||||||||||||||||| ||| || |||| ||||||    
T  22974157 catcaaaagttcaattctcatattatcatcaactcatcagaataacaagactacacttaatctaattttatcctatcttgttataagcgtaaca 22974064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 434
Target Start/End: Original strand, 25669737 - 25669779
Alignment:
Q  392 tacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||||||||||||| || ||||||||||||||    
T  25669737 tacacttaatctaattttatcctactttgttttaagtgtaaca 25669779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 27227569 - 27227472
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  27227569 gtggcatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcctaccttgttttaagtgtaaca 27227472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 33725684 - 33725587
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||||||| || |||| ||||||||||||| ||| || |||||||||||||| |||||||| ||||||||||||||    
T  33725684 gtggcatcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagactgcacttaatctaattttaccctaccttgttttaagtgtaaca 33725587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 15752122 - 15752218
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||||||| || |||| |||| |||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  15752122 tggcatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttttaagcgtaaca 15752218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 4330373 - 4330470
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||||| ||||||||| || ||||||||| |||||||| ||| || ||||||||||||||||||||||| ||||||||||||||    
T  4330373 gtgggatcaaaagttcagtcatcatagtatcatcaatttatcagattaacaagactgcacttaatctaattttatcctaccttgttttaagtgtaaca 4330470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 10182092 - 10181995
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||||||||  | |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  10182092 gtggcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaagattacacttaatctaattttatcctaccttgttttaagtgtaaca 10181995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 15168188 - 15168285
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||| |||||||| || |||| |||| |||||||| ||| || ||||||||||||||||||||||| ||||||||||||||    
T  15168188 gtggcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactgcagttaatctaattttatcctaccttgttttaagtgtaaca 15168285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 47279281 - 47279379
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||| ||||||||||||||||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| |||||| ||||||||    
T  47279281 gtggcatcgaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaattgtaacat 47279379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 7079143 - 7079050
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||||||||||||    
T  7079143 catcaaaagttcagtcatcatagtatcatcaattcatcaaattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 7079050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 8222221 - 8222317
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||||| |||||| ||||||| ||||||||||||||| || |||| ||||||    
T  8222221 tggcatcaaaagttcagttctcatagtatcatcaattcatcatattaacaagactacacttaatctcattttatcctaccttgttataagcgtaaca 8222317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 337 - 432
Target Start/End: Original strand, 16415738 - 16415833
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    |||||||||||||||||| | ||||||||| || |||| || | |||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  16415738 gtggcatcaaaagttcagccatcatagtatcatcaattcattagattaacaagactacacttaatctaattttatcctaccttgttttaagtgtaa 16415833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 42721135 - 42721226
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    ||||||||||||| ||| |||||||| || |||| |||| |||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  42721135 catcaaaagttcaatccccatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttttaagtgtaa 42721226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 2959844 - 2959938
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||||||||| | || |||| |||| |||||||| || ||| ||||||||||||||||||||||| ||| |||||||||||    
T  2959844 catcaaaagttcagtcctcatagtgtcatcaattcatcagattaacaagaccacacttaatctaattttatcctaccttgtttcaagtgtaacat 2959938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 434
Target Start/End: Complemental strand, 30327033 - 30326939
Alignment:
Q  340 gcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||||||||| || |||| |||| ||||||||||||||| ||||||| ||||||||||||||| || |||| ||||||    
T  30327033 gcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaaaactacacttaatctcattttatcctaccttgttataagcgtaaca 30326939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 3535028 - 3535121
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| | || |||||| |||| |||| |||||||| | ||||||||||||||||||||||| |||| ||||||||||||||    
T  3535028 catcaaaagttcagtccccttaatattatcaattcatcagattaacaagaatacatttaatctaattttatcctgccttgttttaagtgtaaca 3535121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 14758133 - 14758230
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||| |||||| | || |||| || | |||||||| ||| || ||||||||||||||||||||||| ||||||||||||||    
T  14758133 gtggcatcaaaagttcagtccccatagtttcatcaattcattagattaacaagactgcacttaatctaattttatcctaccttgttttaagtgtaaca 14758230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 37451382 - 37451474
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||| |||||| || |||||||||||||||||| |||||| ||||||||||||||||  ||||| || |||||||||||    
T  37451382 catcaaaagttcagtcctc-tagtatcatcaatttatcatattaacaagactacacttaatctaattttatctgaccttgttataagtgtaaca 37451474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 38823310 - 38823403
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| ||| |||||||| || |||| |||| |||||||| | |||| |||||||||||||||||||| |||||||||||||||||    
T  38823310 catcaaaagttcaatccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctactttattttaagtgtaaca 38823403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 47682578 - 47682481
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||||| |||||||||||| || |||| |||| |||||||| ||||||||||| |||||||||| || |||| ||||||||||||||    
T  47682578 gtggtatcaaaagttcattcctcatagtatcatcaattcatcagattaacaagactacatttaaactaattttattctgccttgttttaagtgtaaca 47682481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 25160725 - 25160821
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||||||| || |||| || | ||||| || |||||| ||||||| ||||||||||||||| || |||||||||||    
T  25160725 tggcatcaaaagttcagtcctcatagtatcatcaattcattagattaataagactacacttaatctcattttatcctaccttgttataagtgtaaca 25160821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 429
Target Start/End: Complemental strand, 31621637 - 31621545
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtg 429  Q
    |||||||||||| |||||||| |||||||| || |||| |||| |||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  31621637 gtggcatcaaaaattcagtccccatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttttaagtg 31621545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 32216148 - 32216244
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||||||| |||||| || |||| || | ||||||||||||| | |||||| |||||||||||||||| ||||||||||||||    
T  32216148 tggcgtcaaaagttcagtcctcgtagtatcatcaattcattagattaacaaaactaaacttaatcaaattttatcctaccttgttttaagtgtaaca 32216244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 412
Target Start/End: Complemental strand, 28564861 - 28564790
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatc 412  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||| |||||| ||||||||||||||||    
T  28564861 catcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagactacacttaatctaattttatc 28564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 15383029 - 15383122
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| || |||||| || |||| |||| |||||||| |||||| ||||||||||||||||||||||| || |||| ||||||    
T  15383029 catcaaaagttcagtcatcgtagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttataagcgtaaca 15383122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 27533064 - 27532968
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| ||| |||||||| || |||| |||| |||||||| | |||| |||||| |||||||||||||||| ||||||||||||||    
T  27533064 gtggcatcaaaagttcaatccccatagtatcatcaattcatcagattaacaagaatacacttaatc-aattttatcctaccttgttttaagtgtaaca 27532968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 419
Target Start/End: Original strand, 28769745 - 28769826
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||| |||| ||||||||||||| || |||| ||||||||||||| |||||| |||||||||||||||| ||||||    
T  28769745 tggcatcaaaggttcggtcctcatagtatcatcaattcatcatattaacaagactacacttaatctaattttatcatacctt 28769826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 34012461 - 34012364
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||| ||||| ||| || |||| |||| |||||||| | |||| ||||||||||||||||| ||||| ||| ||||||||||    
T  34012461 gtggcatcaaaagttcagtcatcatactatcatcaattcatcagattaacaagattacacttaatctaattttatccaaccttgtttcaagtgtaaca 34012364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 41926255 - 41926352
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||| |||||||||||  ||||||| || |||| |||| |||||||| | |||| |||||||||||||||||||| || ||||||||||||||    
T  41926255 gtggcatcacaagttcagtccctatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcctactttgttttaagtgtaaca 41926352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 48620733 - 48620826
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| | |||||| || |||| |||| |||||||| | |||| |||||||||||||||||||| || ||||||||||||||    
T  48620733 catcaaaagttcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctactttgttttaagtgtaaca 48620826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 51128955 - 51129048
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| | ||||||| || |||| ||||||||||||| |||||| ||||| |||||||||| |||||| || |||||||||||    
T  51128955 catcaaaagttcagtcattatagtatcatcaattcatcatattaacaagactacacttaatataattttatcataccttgttataagtgtaaca 51129048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 428
Target Start/End: Complemental strand, 27563985 - 27563898
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagt 428  Q
    ||||||||||||||| |  ||| |||||| |||| |||| |||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  27563985 catcaaaagttcagttccgataatattatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttttaagt 27563898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 419
Target Start/End: Original strand, 18422747 - 18422825
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||||||||| ||| || |||| |||| |||||||| | |||| |||||||||||||||||||||||    
T  18422747 catcaaaagttcagtcctcataatatcatcaattcatcagattaacaagattacacttaatctaattttatcctacctt 18422825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 419
Target Start/End: Original strand, 30254519 - 30254597
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||||||| ||||| || |||| |||| |||||||| |||| | |||||||||||||||||||||||    
T  30254519 catcaaaagttcagtcctcaaagtatcatcaattcatcagattaacaagactagacttaatctaattttatcctacctt 30254597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 238593 - 238500
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| |  |||| |||| | |||||| | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  238593 catcaaaagttcagtccccatagtatcaacaattaatcagactaacaagaatacacttaatctaattttattctaccttgttttaagtgtaaca 238500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 38759659 - 38759722
Alignment:
Q  371 aatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||    
T  38759659 aattcatcatattaataaaactacatttaatttaattttatcatatcttattttaagtgtaaca 38759722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 39393475 - 39393574
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||||||| | ||| |||||||| || |||| |||| |||||||| | |||| || |||||| |||||||||||||| |||||||||||||||    
T  39393475 gtggcatcaaaagtttaatccccatagtatcataaattcatcagattaacaagaatacacttcatctaatttttatcctaccttgttttaagtgtaacat 39393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 419
Target Start/End: Original strand, 23999443 - 23999521
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||| |||||||||||||| |||| ||||  ||||||| |||||| ||||| |||||||||| ||||||    
T  23999443 catcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaatataattttatcatacctt 23999521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 40884905 - 40885003
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||||||  |||||||  | |||| |||| |||||||| | | || |||||||| |||||||||| ||| |||||||||||||||    
T  40884905 gtggcatcaaaagttcagtccctatagtatcttcaattcatcagattaacaagattgcacttaatctagttttatcctatcttgttttaagtgtaacat 40885003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 9903134 - 9903041
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| ||| |||| ||| || |||| |||| |||||||| |||||| |||||||||||||||| ||| || ||| ||||||||||    
T  9903134 catcaaaagttcaatccacatactatcatcaattcatcaaattaacaagactacacttaatctaattttatcttacattgtttcaagtgtaaca 9903041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 10922823 - 10922916
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| |||||||||||| || || | |||| |||||||| |||||| ||||||| |||||||| |||||| || |||| ||||||    
T  10922823 catcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatcttattttatcataccttgttataagggtaaca 10922916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 11742430 - 11742338
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||| ||| || |||| |||  |||||||| | |||| |||||||||||||||| |||||| ||||||||||||||    
T  11742430 catcaaaagttcagtcc-cataatatcatcaattcatcggattaacaagaatacacttaatctaattttatcttaccttgttttaagtgtaaca 11742338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 27267283 - 27267187
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||| ||||||||||||  |||||||| || |||| |||| |||||||| |||||| |||||||||||| || ||||||| |||| |||||||||    
T  27267283 gtggcattaaaagttcagtctccatagtatcatcaattcatcagattaacaagactacacttaatctaatttaat-ctaccttgttttgagtgtaaca 27267187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 418
Target Start/End: Complemental strand, 27763391 - 27763314
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacct 418  Q
    |||||||||| ||| ||||||||||| || |||||||||  ||||||| |||||| |||||||||||||||| |||||    
T  27763391 catcaaaagtccagccctcatagtatcatcaatttatcaggttaacaagactacacttaatctaattttatcatacct 27763314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 37618974 - 37618894
Alignment:
Q  341 catcaaaagttcagtcctcatagtatt--attaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    ||||||||||||||| ||||||||||   || |||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  37618974 catcaaaagttcagttctcatagtatatcatcaattcatcagattaacaatactacacttaatctaattttatcctacctt 37618894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 1547379 - 1547468
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||| |||||||||| ||        || |||||||||| |||| |||||||||||||||||||| || ||||||||||||||    
T  1547379 gtggcatcaaaagttcagttctcatagtatcat--------cagattaacaaaaatacacttaatctaattttatcctactttgttttaagtgtaaca 1547468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 32267130 - 32267223
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| |||||||| ||| || ||   |||| |||||||| | |||| ||||||||||||||||||||||| || |||| ||||||    
T  32267130 catcaaaagttcactcctcatattatcatcaacccatcagattaacaagattacacttaatctaattttatcctaccttgttataagcgtaaca 32267223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 19899852 - 19899756
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||  ||||||||||| || |||| ||||  ||||||| |||||| ||||| |||||||||| ||| || || |||| ||||||    
T  19899852 tggcatcaaaagttcaaccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatcatacattgttctaagcgtaaca 19899756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 3309239 - 3309337
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||||| || ||||||||| || |||| |||| |||||||| | |||| ||||||||| ||||| ||||| || |||||| |||||||    
T  3309239 gtggtatcaaaagttcaatcttcatagtatcatcaattcatcagattaacaagaatacacttaatctaatttttaacctactttgttttaaatgtaaca 3309337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 22170807 - 22170900
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||  |||| ||| || |||| || | ||||| || |||||| |||||||||||| |||||||||| ||| || |||||||    
T  22170807 catcaaaagttcagtctacataatatcatcaattcattagattaataacactacacttaatctaatttcatcctaccttgtttcaaatgtaaca 22170900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 65; Significance: 2e-28; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 434
Target Start/End: Original strand, 231 - 327
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||||||| || |||| |||| | |||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  231 tggcatcaaaagttcagtcctcatagtatcatcaattcatcagactaacaagaatacatttaatctaattttatcctatcttattttaagtgtaaca 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 434
Target Start/End: Complemental strand, 408512 - 408421
Alignment:
Q  342 atcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||| |||||| || |||| |||| |||||||| |||||| ||||||||||||||||||||||| || |||| ||||||    
T  408512 atcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttataagcgtaaca 408421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 94472 - 94375
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||  |||| |||| ||| || |||| || | |||||||| |||||| ||||| ||||||||| ||| ||| ||| ||||||||||    
T  94472 gtggcatcaaaagtttggtccccatactatcatcaattcatgagattaacaagactacacttaatttaattttattctagcttgtttcaagtgtaaca 94375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 15491711 - 15491808
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||| ||||||||||| || |||| |||| |||||||| | | || ||||||||||||||||||||||||||||||||||||||    
T  15491711 gtggcatcaaaagttcagccctcatagtatcatcaattcatcagattaacaagaatgcacttaatctaattttatcctaccttattttaagtgtaaca 15491808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 20768180 - 20768276
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||||||||||||||| ||||||| |||| |||||||| | |||  |||||||||||||||||||| || |||||||||||||||    
T  20768180 gtggcatcaaaagttcagtcctcatagtatcattaattcatcagattaacaagattac--ttaatctaattttatcctactttgttttaagtgtaacat 20768276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 7235118 - 7235026
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| |||||||||||| |||| |||| |||||||| ||| || ||||||||||||||||||||||| ||||||||||||||    
T  7235118 catcaaaagttcagtc-tcatagtattatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttttaagtgtaaca 7235026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 21017199 - 21017103
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||| |||||||| || |||| |||| | |||||| | || | |||||||||||||||||||| |||||||||||||||||    
T  21017199 tggcatcaaaagttcagtccccatagtatcatcaattcatcagactaacaagaataaacttaatctaattttatcctacgttattttaagtgtaaca 21017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 6091267 - 6091174
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||| ||| |||||| || |||| || | ||||||||||||||| |||||||||||||||| |||||| ||||||| ||||||    
T  6091267 catcaaaagttcagtactcgtagtatcatcaattcattagattaacaaaactacacttaatctaattttatcataccttgttttaagcgtaaca 6091174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 337 - 417
Target Start/End: Original strand, 33618930 - 33619010
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacc 417  Q
    ||||||||||||||||||| |||||||||| || |||| |||| |||||||| ||| || |||||||||||||||||||||    
T  33618930 gtggcatcaaaagttcagttctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctacc 33619010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 7055299 - 7055206
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||| ||||||||||| || |||| ||||  ||||||| |||||| ||||| |||||||||| |||||| || |||||||||||    
T  7055299 catcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatcataccttgttctaagtgtaaca 7055206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 29182263 - 29182356
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||  |||| ||| || |||| |||| ||||| || | |||| ||||||||||||||||||||| ||||||||||||||||    
T  29182263 catcaaaagttcagtctccatattatcatcaattcatcagattaataagaatacacttaatctaattttatcctaccatattttaagtgtaaca 29182356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 419
Target Start/End: Original strand, 5627491 - 5627569
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||| |||||||||||||| |||| ||||  ||||||| |||||| ||||| |||||||||| ||||||    
T  5627491 catcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaatataattttatcatacctt 5627569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 30353446 - 30353348
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||| | |||||||||  |||||||| || |||| ||||||| ||||| | |||| |||||||||||||||| | |||| |||||||||||||||    
T  30353446 gtggcatcgatagttcagtctccatagtatcatcaattcatcatataaacaagaatacacttaatctaattttatcatgccttgttttaagtgtaacat 30353348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 1945934 - 1946027
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||| ||||||||||| || |||| ||||  ||||||| |||||| ||||| |||||||||| |||||| || |||| ||||||    
T  1945934 catcaaaagttcagccctcatagtatcatgaattcatcaagttaacaagactacacttaatataattttatcataccttgttctaagcgtaaca 1946027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 4318907 - 4318813
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaatttt-atcctaccttattttaagtgtaaca 434  Q
    |||||||||||||  || |||||||| || |||| || | |||||||| | |||| ||||||||||||| |||||||||| ||||||||||||||    
T  4318907 catcaaaagttcaacccccatagtatcatcaattcattagattaacaagaatacacttaatctaatttttatcctaccttgttttaagtgtaaca 4318813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 8513333 - 8513419
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaa 426  Q
    ||||||||||||||||| |||| ||| || |||| ||||||||||||| | |||| || |||||| |||||||||||||| ||||||    
T  8513333 catcaaaagttcagtccccataatatcatcaattcatcatattaacaagaatacacttgatctaatttttatcctaccttgttttaa 8513419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 3880023 - 3879930
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| ||| |||||||| || |||| |||| | |||||| | || | ||| ||||||||||||||||||| |||||| |||||||    
T  3880023 catcaaaagttcaatccccatagtatcatcaattcatcagactaacaagaatatacttattctaattttatcctaccttgttttaaatgtaaca 3879930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 434
Target Start/End: Complemental strand, 33893082 - 33892994
Alignment:
Q  345 aaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| | |||||| || |||| |||| |||||||| | |||| ||||||||||||||||||||||| ||||| || |||||    
T  33893082 aaaagttcagtcc-cttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttatgtataaca 33892994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 426
Target Start/End: Original strand, 6089004 - 6089094
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaa 426  Q
    ||||||||||||||||||||  |||||||| || |||| |||| |||||||| | ||   || |||||| |||||||||||||| ||||||    
T  6089004 gtggcatcaaaagttcagtcaccatagtatcatcaattcatcagattaacaagaatatccttgatctaatttttatcctaccttgttttaa 6089094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 366
Target Start/End: Original strand, 18498530 - 18498559
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtat 366  Q
    ||||||||||||||||||||||||||||||    
T  18498530 gtggcatcaaaagttcagtcctcatagtat 18498559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 339 - 434
Target Start/End: Complemental strand, 46888270 - 46888175
Alignment:
Q  339 ggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||| |||| |||  |||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  46888270 ggcatcaaaagttcagtccccatactatcgttaattcatcagattaacaaaactacacttaatctaattttatcctaccttgtttcaagtgtaaca 46888175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 341 - 435
Target Start/End: Complemental strand, 25701168 - 25701074
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||  |||||| | ||||||||||||||||||||| |||||||||||||||    
T  25701168 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaggactacactaaatctaattttatcctaccttgttttaagtgtaacat 25701074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 434
Target Start/End: Original strand, 1815409 - 1815494
Alignment:
Q  349 gttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||| || |||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||||| ||||||    
T  1815409 gttcagtcctcatagtatcatcaattcatcatattaacaagactacatttactctaattttatcctaccttgttttaagggtaaca 1815494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 33816648 - 33816551
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||  |||||||| || ||||||||| |||||||| | | || ||||||||||||||||||||||| ||||||||||||||    
T  33816648 gtggcatcaaaagttcagtctccatagtatcatcaatttatcagattaacaagattgcacttaatctaattttatcctaccttgttttaagtgtaaca 33816551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 55478002 - 55477909
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| |||||| ||||||||||||||||||| ||| || |||||||||||    
T  55478002 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaacttgttataagtgtaaca 55477909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 6864134 - 6864228
Alignment:
Q  340 gcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| ||||||||||||||| || ||||||||| |||||||| |||||||||||| |||||||||| |||||| || |||| ||||||    
T  6864134 gcatcaaaagtccagtcctcatagtatcatcaatttatcagattaacaagactacatttaatttaattttatcataccttgttataagcgtaaca 6864228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 19089564 - 19089486
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  19089564 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctacctt 19089486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 37663852 - 37663774
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| |||||| |||||||||||||||||||||||    
T  37663852 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctacctt 37663774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 28003097 - 28003004
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||| ||||||||| || |||| |||  |||||||| ||| || ||||||||||||||||||||||| ||||||||||||||    
T  28003097 catcaaaagttcagtcatcatagtatcatcaattcatcggattaacaagactgcacttaatctaattttatcctaccttgttttaagtgtaaca 28003004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 32592193 - 32592286
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| | |||||| || |||| |||| |||||||| | |||||||||| ||||||||||||||||| ||||||||||||||    
T  32592193 catcaaaagttcagtccccttagtatcatcaattcatcagattaacaagaatacatttaatttaattttatcctaccttgttttaagtgtaaca 32592286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 34948212 - 34948115
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| ||| || |||| ||||||||||||| | |||| ||||||||||||||||||| ||| ||| ||||| ||||    
T  34948212 gtggcatcaaaagttcagtcctcataatatcatcaattcatcatattaacaagaatacacttaatctaattttatcctatcttgtttaaagtgcaaca 34948115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 428
Target Start/End: Complemental strand, 4934316 - 4934226
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagt 428  Q
    |||||||||||||||| |||||||||||| || | || |||| |||||||| |||||| ||||||||||||||| ||||||| ||||||||    
T  4934316 tggcatcaaaagttcaatcctcatagtatcatcatttcatcagattaacaagactacacttaatctaattttattctaccttgttttaagt 4934226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 342 - 432
Target Start/End: Complemental strand, 5048075 - 5047985
Alignment:
Q  342 atcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    |||||||||||||| | |||||||| || |||| || | |||||||| ||| |||||||||||||||||||||||||| ||||||||||||    
T  5048075 atcaaaagttcagttcccatagtatcatcaattcatgagattaacaagactgcatttaatctaattttatcctaccttgttttaagtgtaa 5047985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 38011954 - 38012048
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||||||||| |||| |||||| |||| |||| |||||||| |||||| ||||| |||||||||  |||||| |||||||||||||||    
T  38011954 catcaaaagttcagtccccataatattatcaattcatcagattaacaagactacacttaatttaattttattataccttgttttaagtgtaacat 38012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 23761172 - 23761264
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||| |||||||| || |||| |||| |||||||| | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  23761172 catcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttat-ctaccttgttttaagtgtaaca 23761264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 33341495 - 33341591
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||| |||||||| || |||| |||| |||||||| | || | ||||| ||||||||||||||||| ||||||||||||||    
T  33341495 gtggcatcaaaagttcagtcc-catagtatcatcaattcatcagattaacaagaatatacttaatataattttatcctaccttgttttaagtgtaaca 33341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 434
Target Start/End: Complemental strand, 55241219 - 55241123
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||| |||||||| || ||||||||| || || || | |||| |||||||||||||||| |||||| ||||||||||||||    
T  55241219 gtggcatcaaaagttcagtccccatagtatcatcaatttatcagat-aagaagaatacacttaatctaattttatcataccttgttttaagtgtaaca 55241123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 19440762 - 19440666
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||||||| ||| || |||| |||| |||||||| |||||| |||||||||||||||| || ||| || |||| ||||||    
T  19440762 tggcatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagactacacttaatctaattttatcttagcttgttataagcgtaaca 19440666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 434
Target Start/End: Complemental strand, 35021149 - 35021053
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||||  |||||| |||||| || |||| || | ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  35021149 tggcgtcaaaagtttcgtcctcgtagtatcatcaattcattagattaacaaaactacacttaatctaattttatcctaccttgttttaagcgtaaca 35021053  T

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Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 341 - 432
Target Start/End: Complemental strand, 36493799 - 36493708
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    ||||||||||||||||| |||||||| || |||| || | |||||||| |||||| |||||||||||||||| ||| || ||||||||||||    
T  36493799 catcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactacacttaatctaattttatcatacattgttttaagtgtaa 36493708  T

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Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 27396716 - 27396810
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    |||||||||||  ||||||||||||| || |||| |||| |||||||| | |||| ||||| ||||||||| ||||||| |||||||||||||||    
T  27396716 catcaaaagtttcgtcctcatagtatcatcaattcatcagattaacaagaatacacttaatttaattttattctaccttgttttaagtgtaacat 27396810  T

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Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 434
Target Start/End: Original strand, 9139349 - 9139438
Alignment:
Q  345 aaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||| ||| |||||||| || || | |||| |||||||| |||||| ||||||||||||||||||||||| |||||| |||||||    
T  9139349 aaaagttcaatccccatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcctaccttgttttaactgtaaca 9139438  T

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Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 430
Target Start/End: Complemental strand, 29584314 - 29584222
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgt 430  Q
    ||||||||||||||||||| ||||||||| || |||| |||| |||||  | | |||| ||||||||||||||| ||||||| ||||||||||    
T  29584314 tggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatctaattttattctaccttgttttaagtgt 29584222  T

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Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 341 - 416
Target Start/End: Original strand, 50764830 - 50764905
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctac 416  Q
    ||||||||||||| |||||||||||| || |||| || | |||||||| | |||||||||||||||||||||||||    
T  50764830 catcaaaagttcaatcctcatagtatcatcaattcattagattaacaagaatacatttaatctaattttatcctac 50764905  T

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Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 30002708 - 30002650
Alignment:
Q  376 atcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  30002708 atcagattaacaagaatacacttaatctaattttatcctaccttattttaagtgtaaca 30002650  T

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Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 17167813 - 17167906
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| ||  |||||||| ||||||| |||| | ||| || | |||| |||||||||||||||||||| || ||||||||||||||    
T  17167813 catcaaaagttcattctccatagtatcattaattcatcagactaagaagaatacacttaatctaattttatcctacattgttttaagtgtaaca 17167906  T

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Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 17173390 - 17173483
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| ||  |||||||| ||||||| |||| | ||| || | |||| |||||||||||||||||||| || ||||||||||||||    
T  17173390 catcaaaagttcaatctccatagtatcattaattcatcagactaagaagaatacacttaatctaattttatcctacattgttttaagtgtaaca 17173483  T

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Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 432
Target Start/End: Original strand, 32579547 - 32579637
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaa 432  Q
    ||||||||||| |||| |||||||||||| | || |||| |||||||  |||  | ||||||||||||||||||||||| ||||||||||||    
T  32579547 catcaaaagtttagtc-tcatagtattatcagttcatcagattaacatgactgtacttaatctaattttatcctaccttgttttaagtgtaa 32579637  T

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Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 37775765 - 37775860
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||   |||  |||||| || |||| |||| |||||||| | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  37775765 gtggcatcaaaagttcccccct--tagtatcatcaattcatcagattaacaagaatacacttaatctaattttattctaccttgttttaagtgtaaca 37775860  T

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Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 345 - 419
Target Start/End: Original strand, 42199833 - 42199907
Alignment:
Q  345 aaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||| ||||||||||| || |||| |||| |||||||| |||||| ||||| |||||||||| ||||||    
T  42199833 aaaagttcagccctcatagtatcatcaattcatcagattaacaagactacacttaatataattttatcatacctt 42199907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 54499349 - 54499255
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaa-ttttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||   ||||||| || |||| ||||||||||||| | || | ||||||||| ||||||| |||||| ||||||||||||||    
T  54499349 catcaaaagttcagtctctatagtatcatcaattcatcatattaacaagaatatacttaatctaatttttatcataccttgttttaagtgtaaca 54499255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 879659 - 879566
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||| | || ||||||||| || || | |||| |||||||| ||||||  |||||||||||||||||||||| || |||| ||||||    
T  879659 catcaaaagtttaatcttcatagtatcatcaactcatcagattaacaagactacacataatctaattttatcctaccttgttataagcgtaaca 879566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 4598088 - 4598184
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||||||| | |||  | || |||| ||||||||||||| | |||| ||||| ||||||||||||  ||| ||||||||||||||    
T  4598088 gtggcatcaaaagttcagtccccttagactcatcaattcatcatattaacaagaatacacttaatttaattttatcct-gcttgttttaagtgtaaca 4598184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 25184213 - 25184306
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||| || ||||||||| || || | |||| |||||||| |||||| || |||||||||||||||||||| || |||| ||||||    
T  25184213 catccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatctaattttatcctaccttgttataagcgtaaca 25184306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 39398049 - 39398102
Alignment:
Q  381 attaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||| | |||| |||||||||||||||||| |||||||||||||||||||    
T  39398049 attaacaagaatacacttaatctaattttatcctgccttattttaagtgtaaca 39398102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 50697342 - 50697434
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||| | ||| |||||| || |||| |||| |||||||| |||||| ||||| ||||||||||||||||| || |||| ||||||    
T  50697342 catcaaaagttcaattctc-tagtatcatcaattcatcagattaacaagactacacttaatataattttatcctaccttgttataagcgtaaca 50697434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 434
Target Start/End: Complemental strand, 32912690 - 32912598
Alignment:
Q  342 atcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||  |||||| ||| || |||||||||  ||||||| |||||| ||||| |||||||||| |||||| || |||| ||||||    
T  32912690 atcaaaagttcagcactcataatatcatcaatttatcaggttaacaagactacacttaatataattttatcataccttgttctaagcgtaaca 32912598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 47253848 - 47253933
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||||||||||||||||||||||||| ||        || |||||||| | |||| ||||| ||||||||||||||||| ||||||||||||||    
T  47253848 catcaaaagttcagtcctcatagtatcat--------cagattaacaagaatacacttaatttaattttatcctaccttgttttaagtgtaaca 47253933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 428
Target Start/End: Original strand, 49376063 - 49376154
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagt 428  Q
    |||||||||||||||||||| ||||||||| || |||| |||| |||||||| | |||  || |||||||||||| || ||||  |||||||    
T  49376063 gtggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagattacgcttgatctaattttattctgccttgatttaagt 49376154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 434
Target Start/End: Original strand, 7703644 - 7703702
Alignment:
Q  376 atcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| |||||||| | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  7703644 atcagattaacaagaatacacttaatctaattttattctaccttgttttaagtgtaaca 7703702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 17272068 - 17272157
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    ||||||||||||||||    |||||| || |||| |||| |||||  | | |||| ||||||||||||||| ||||||| ||||||||||||||    
T  17272068 catcaaaagttcagtc----tagtatcatcaattcatcagattaatgagaatacacttaatctaattttattctaccttgttttaagtgtaaca 17272157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 3042749 - 3042812
Alignment:
Q  371 aatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||| | |||| ||||| |||||||||| ||||||||| |||| ||||||    
T  3042749 aattcatcatattaacaagattacacttaatataattttatcataccttattataagcgtaaca 3042812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 430
Target Start/End: Complemental strand, 35025672 - 35025618
Alignment:
Q  376 atcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgt 430  Q
    |||| |||||||| ||| |||||||| ||||||||||||| ||| ||||||||||    
T  35025672 atcagattaacaagactgcatttaatataattttatcctatcttgttttaagtgt 35025618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 337 - 434
Target Start/End: Original strand, 12005 - 12102
Alignment:
Q  337 gtggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaaca 434  Q
    |||| ||||||||||||||||||||| ||| || |||| |||| |||||||| | |||| ||||||||||||||||||| ||| ||||||||||||||    
T  12005 gtggtatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagaatacacttaatctaattttatcctatcttgttttaagtgtaaca 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 415
Target Start/End: Original strand, 7987 - 8061
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatccta 415  Q
    |||||||||||||||||||||||||| || |||| |||| |||||||| |||||| |||||||||||||||||||    
T  7987 catcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatccta 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 44054 - 44128
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatc 412  Q
    |||||| |||||||||||||||||||||| || |||| |||| ||||| || |||||||||||| ||||||||||    
T  44054 tggcataaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaatataattttatc 44128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 412
Target Start/End: Complemental strand, 154733 - 154659
Alignment:
Q  338 tggcatcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatc 412  Q
    |||||| |||||||||||||||||||||| || |||| |||| ||||| || |||||||||||| ||||||||||    
T  154733 tggcataaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaatataattttatc 154659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 267384 - 267478
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctaccttattttaagtgtaacat 435  Q
    ||||||||||||||||   ||| ||| || |||| || | |||| ||| |||||| ||||||||||||||||||||||| |||||| ||||||||    
T  267384 catcaaaagttcagtctctataatatcatcaattcattagattagcaagactacacttaatctaattttatcctaccttgttttaaatgtaacat 267478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 419
Target Start/End: Complemental strand, 146101 - 146023
Alignment:
Q  341 catcaaaagttcagtcctcatagtattattaatttatcatattaacaaaactacatttaatctaattttatcctacctt 419  Q
    |||||||||||||| | ||||||||| || |||| ||||  ||||||| |||||| ||||| |||||||||| ||||||    
T  146101 catcaaaagttcagccttcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatcatacctt 146023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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