View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6403_high_20 (Length: 226)
Name: NF6403_high_20
Description: NF6403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6403_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 1331845 - 1332055
Alignment:
| Q |
15 |
ctagttcttgtcatttgcgactgtccaacaatttactccatcatatgacaacattcatgtagccaagattcaatttaccacatccattaaaccaactatt |
114 |
Q |
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| T |
1331845 |
ctagttcttgtcatttgcgactgtccaacaatttactccatcatatgacaacattcatgtagccaagattcaatttaccacatccattaaaccaactatt |
1331944 |
T |
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| Q |
115 |
cggtattataagtgtgatatctgtcatttttcgaagtataaccaaagtactttttctccgaattgatccgaatgtcttattcattctgatttttggcgac |
214 |
Q |
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| T |
1331945 |
cggtattttaagtgtgatatctgtcatttttcgaagtataaccaaagtactttttctccgaattgatccgaatgtcttattcattctgatgtttggcgac |
1332044 |
T |
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| Q |
215 |
cattccatgtt |
225 |
Q |
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| T |
1332045 |
cattccatgtt |
1332055 |
T |
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