View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6403_low_6 (Length: 367)
Name: NF6403_low_6
Description: NF6403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6403_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 21 - 284
Target Start/End: Original strand, 46484635 - 46484898
Alignment:
| Q |
21 |
caccatagacgttacctctttttaaagcaccaaacctaacgttttcagtatgatgtttcgtgatgctatacactacttacttcaaattaaacttgaacaa |
120 |
Q |
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| T |
46484635 |
caccatagacgttacctctttttaaagcaccaaacctaacgttttcagtatgatgtttcgtgatgctatacactacttacttcaaattaaacttgaacaa |
46484734 |
T |
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| Q |
121 |
tacacgaaaaggcaaaaaccttcttttatatcttaagagactaacattagacatgctatatcttttctttttgacattaagggagcctaagagaaatatt |
220 |
Q |
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| T |
46484735 |
tacacgaaaaggcaaaaaccttcttttatatcttaagagactaacattagacatgctatatcttttctttttgacattaagggagcctaagagaaatatt |
46484834 |
T |
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| Q |
221 |
tttcattgattatacttttaaattaaaaaattaacggagcctaaaaataatggacaacatggtg |
284 |
Q |
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| T |
46484835 |
tttcattgattatacttttaaattaaaaaattaacggagcctaaaaataatggacaacatggtg |
46484898 |
T |
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