View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6407_low_5 (Length: 250)
Name: NF6407_low_5
Description: NF6407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6407_low_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 46276603 - 46276364
Alignment:
| Q |
11 |
caaaggaaattaaaacatcaacttttgacattagtctcaatcacaattaacatgtcacaatcacctgctataccaatgggnnnnnnngtggaactgcatg |
110 |
Q |
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| T |
46276603 |
caaaggaaattaaaacatcaacttttgacattagtctcaatcacaattaacatgtcacaatcacctgctataccaatgggaaaaaaagtggaactgcatg |
46276504 |
T |
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| Q |
111 |
catttcgattgttatgcactgcggcaccgccccaaacgtgaatgttggttctcacaatttcatgctgtataacttcccgctacactgttgatataagtga |
210 |
Q |
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| T |
46276503 |
catttcgattgttatgcactgcggcaccgccccaaacgtgaatgttggttctcactatttcatgctgtataacttcccgctacactgttgatataagtga |
46276404 |
T |
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| Q |
211 |
gaaaataaaagtcattaaaacttgaaagaggttttcttct |
250 |
Q |
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| T |
46276403 |
gaaaataaaagtcattaaaacttgaaagaggttttcttct |
46276364 |
T |
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