View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6408_high_3 (Length: 238)
Name: NF6408_high_3
Description: NF6408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6408_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 42293174 - 42293395
Alignment:
| Q |
1 |
atgtgatgataggtaccaagatcctaagccggagatatcaatattcagggaggctagctttggacatggagtattagaggttgttaatgcatcacatgca |
100 |
Q |
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| T |
42293174 |
atgtgatgataggtaccaagatcctaagccggagatatcaatattcagggaggctagctttggacatggagtattagaggtggttaatgcatcacatgca |
42293273 |
T |
|
| Q |
101 |
ctttggagttggcataagaatgataatgaggaacctgttgttagtgactctgtttggctaacaagcctttcctctaaccccgcttgtaaagcttaatata |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
42293274 |
ctttggagttggcataaaaatgataatgaggaacctgttgttagtgactctgtttggctaacaagcctttcctctaaccccgcttgtaaagcttgatata |
42293373 |
T |
|
| Q |
201 |
ctactactttggaagttaaata |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
42293374 |
ctactactttggaagttaaata |
42293395 |
T |
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