View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6409_high_26 (Length: 247)
Name: NF6409_high_26
Description: NF6409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6409_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 41574919 - 41575156
Alignment:
| Q |
1 |
tcgggaaaagcataaaaacaaataatgacaaacctgtatgtaccggaattgattataataagggttgtattaaaactagattcaggaacggcatcaatcg |
100 |
Q |
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| T |
41574919 |
tcgggaaaagcataaaaacaaataatgaccaacctgtatgtaccagaattgattataataagggttgtattaaaactagattcaggaacggcatcaatcg |
41575018 |
T |
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| Q |
101 |
ctttctgcacgctgctaaagttagcacgaccatttaagtcgactgtgaaagtgatggtcgcattatagtctaaaattagttgtgaagcccgtttgacctc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41575019 |
ctttctgcacgctgctaaagttagcacgaccatttaagtcgactgtgaaagtgatggtcgcattatagtctaaaattagttgtgaagcccgtttggcctc |
41575118 |
T |
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| Q |
201 |
gtcgcatttttccttatgcctcatccaatgatgatgtc |
238 |
Q |
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||| |||||||||||||||||||||||||||||||||| |
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| T |
41575119 |
gtcacatttttccttatgcctcatccaatgatgatgtc |
41575156 |
T |
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