View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6409_low_41 (Length: 216)
Name: NF6409_low_41
Description: NF6409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6409_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 27913325 - 27913142
Alignment:
| Q |
15 |
cagagacagtaacagtaacataaattctgctactaatattgttgatgttgttaactcttctacaccttctatgatggacgaaacatcagctacaacaaac |
114 |
Q |
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| T |
27913325 |
cagaaacagtaacagtaacataagttctgctactaatattgttgatgttgttaactcttctacaccttctatgatggacgaaacatcagctacaacaaac |
27913226 |
T |
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| Q |
115 |
tggattgatgggattttgaaggatcttattcatacttcaaacagtgtttctattcctcaacttatcaacaatgttagagagatt |
198 |
Q |
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| T |
27913225 |
tggattgatggtattttgaaggatcttattcatacttcaaacagtgtttctattcctcaacttatcaacaatgttagagagatt |
27913142 |
T |
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