View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6410_high_11 (Length: 335)
Name: NF6410_high_11
Description: NF6410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6410_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 297
Target Start/End: Original strand, 14531172 - 14531459
Alignment:
| Q |
11 |
cacagaatctaagtacgacgtgttttatgtaatcataaactagtaacaagcataaatggaattgagtgttttgcacgtaagatgacaagcatttaggcca |
110 |
Q |
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| T |
14531172 |
cacagaatctaagtatgacgtgttttatgtaatcataaactagtaacaagcataaatggaattgagtgatttgcacgtaagatgacaagcatttaggcca |
14531271 |
T |
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| Q |
111 |
aaa-aagttctaatgtattattgtgtgttggacttttgagaagcagtacctcgaatagtggtagctagtactaatgttacccttaacattttgcttaaag |
209 |
Q |
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| T |
14531272 |
aaaaaagttctaatgtattattgtgtgttggacttttgagaagcagtacctcgaatagtggtagctagtactaatgttacgcttaacattttgcttaaag |
14531371 |
T |
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| Q |
210 |
gttaaaatttcttgatgattttcattttaaataannnnnnngtttaagaatgtctcaagggtattgattaacaaatctataaaaataa |
297 |
Q |
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| T |
14531372 |
gttaaaatttcttgatgattttcattttaaataatttttttgtttaagaatgtctcaaaagtattgattaacaaatctataaaaataa |
14531459 |
T |
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