View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6410_high_13 (Length: 265)

Name: NF6410_high_13
Description: NF6410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6410_high_13
NF6410_high_13
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-182)||(11254-11435)
[»] chr6 (38 HSPs)
chr6 (1-182)||(18800350-18800531)
chr6 (1-143)||(23839111-23839253)
chr6 (1-154)||(10986170-10986323)
chr6 (1-143)||(4477770-4477912)
chr6 (1-154)||(29614136-29614290)
chr6 (9-154)||(930085-930229)
chr6 (1-143)||(23057851-23057993)
chr6 (29-154)||(12168305-12168428)
chr6 (29-154)||(19287214-19287337)
chr6 (29-154)||(19785859-19785982)
chr6 (29-154)||(19878398-19878521)
chr6 (29-154)||(19884174-19884297)
chr6 (2-141)||(21565214-21565353)
chr6 (88-182)||(24512805-24512899)
chr6 (62-144)||(34639986-34640068)
chr6 (62-144)||(34646660-34646742)
chr6 (29-168)||(25469679-25469816)
chr6 (91-143)||(9187498-9187550)
chr6 (87-143)||(25348486-25348542)
chr6 (87-141)||(25598643-25598697)
chr6 (129-181)||(933614-933666)
chr6 (87-143)||(25397172-25397228)
chr6 (45-144)||(31252379-31252478)
chr6 (222-264)||(21565088-21565129)
chr6 (222-263)||(18800571-18800612)
chr6 (87-143)||(19471335-19471391)
chr6 (231-265)||(929977-930011)
chr6 (87-141)||(2286769-2286823)
chr6 (109-143)||(18659450-18659484)
chr6 (109-143)||(24441673-24441707)
chr6 (91-144)||(11288668-11288721)
chr6 (91-144)||(15458492-15458545)
chr6 (91-144)||(15465087-15465140)
chr6 (129-157)||(1593749-1593777)
chr6 (129-157)||(21723887-21723915)
chr6 (116-144)||(28288509-28288537)
chr6 (109-149)||(29415551-29415591)
chr6 (222-262)||(29614029-29614069)
[»] chr5 (18 HSPs)
chr5 (1-180)||(38144500-38144678)
chr5 (1-143)||(28370055-28370196)
chr5 (1-143)||(19512299-19512441)
chr5 (1-148)||(22751054-22751201)
chr5 (29-148)||(23528573-23528690)
chr5 (88-175)||(22438715-22438803)
chr5 (79-143)||(18407944-18408008)
chr5 (79-143)||(23111200-23111264)
chr5 (88-180)||(42961566-42961658)
chr5 (128-180)||(1856445-1856497)
chr5 (128-180)||(21674415-21674467)
chr5 (89-144)||(19236900-19236955)
chr5 (91-144)||(22461158-22461211)
chr5 (91-144)||(22467782-22467835)
chr5 (89-144)||(20781744-20781799)
chr5 (115-144)||(17021913-17021942)
chr5 (33-154)||(34830029-34830149)
chr5 (129-157)||(757431-757459)
[»] scaffold0154 (2 HSPs)
scaffold0154 (4-182)||(30772-30951)
scaffold0154 (222-265)||(30991-31034)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-144)||(111599-111741)
scaffold0026 (1-160)||(11834-11993)
scaffold0026 (222-265)||(11728-11771)
[»] chr8 (18 HSPs)
chr8 (1-144)||(44477536-44477678)
chr8 (1-144)||(44492694-44492836)
chr8 (1-154)||(23866528-23866680)
chr8 (1-141)||(8727735-8727875)
chr8 (29-154)||(17054533-17054656)
chr8 (1-180)||(27940815-27940996)
chr8 (88-182)||(14056525-14056619)
chr8 (79-143)||(23482053-23482117)
chr8 (33-143)||(18614217-18614327)
chr8 (88-182)||(25111976-25112070)
chr8 (87-143)||(39364919-39364975)
chr8 (89-143)||(29643386-29643440)
chr8 (116-179)||(21325730-21325794)
chr8 (128-180)||(30765873-30765925)
chr8 (89-144)||(24320670-24320725)
chr8 (120-179)||(21321132-21321192)
chr8 (87-143)||(21931696-21931752)
chr8 (116-179)||(22381057-22381121)
[»] chr3 (35 HSPs)
chr3 (1-143)||(9534241-9534382)
chr3 (1-144)||(23370505-23370648)
chr3 (2-141)||(20247791-20247930)
chr3 (1-143)||(14762758-14762900)
chr3 (4-171)||(16801440-16801606)
chr3 (1-141)||(24192868-24193009)
chr3 (1-141)||(38310802-38310942)
chr3 (29-154)||(41455087-41455210)
chr3 (29-144)||(24933828-24933941)
chr3 (2-141)||(55499104-55499244)
chr3 (82-143)||(18929239-18929300)
chr3 (79-143)||(17240513-17240577)
chr3 (222-265)||(16798577-16798620)
chr3 (128-180)||(24122221-24122273)
chr3 (89-144)||(13302240-13302295)
chr3 (89-144)||(13323787-13323842)
chr3 (128-180)||(13967762-13967814)
chr3 (128-180)||(13973237-13973289)
chr3 (89-144)||(12033444-12033499)
chr3 (89-144)||(13312896-13312951)
chr3 (89-144)||(17131732-17131787)
chr3 (89-144)||(51301589-51301644)
chr3 (222-264)||(55498978-55499019)
chr3 (29-144)||(10389443-10389557)
chr3 (29-144)||(10414532-10414646)
chr3 (29-144)||(10421202-10421316)
chr3 (89-144)||(14865846-14865901)
chr3 (109-144)||(23392819-23392854)
chr3 (129-170)||(14651862-14651904)
chr3 (87-141)||(16801027-16801081)
chr3 (129-179)||(18718261-18718311)
chr3 (108-144)||(2247649-2247685)
chr3 (93-149)||(10833303-10833359)
chr3 (129-169)||(18127693-18127733)
chr3 (129-169)||(18135463-18135503)
[»] chr2 (22 HSPs)
chr2 (1-143)||(6483631-6483772)
chr2 (1-143)||(6487098-6487239)
chr2 (1-143)||(19661454-19661595)
chr2 (4-154)||(26583744-26583892)
chr2 (2-143)||(23101463-23101604)
chr2 (2-141)||(23089057-23089196)
chr2 (29-144)||(5706023-5706137)
chr2 (2-141)||(23878922-23879060)
chr2 (79-143)||(23265133-23265197)
chr2 (79-143)||(23280201-23280265)
chr2 (82-143)||(21908353-21908414)
chr2 (88-180)||(6260135-6260227)
chr2 (136-180)||(19665037-19665081)
chr2 (87-143)||(24661576-24661632)
chr2 (89-144)||(10577-10632)
chr2 (89-144)||(25180929-25180984)
chr2 (222-264)||(23101339-23101380)
chr2 (89-153)||(26885183-26885246)
chr2 (222-265)||(6260051-6260093)
chr2 (91-154)||(23168288-23168351)
chr2 (91-154)||(23579545-23579608)
chr2 (224-265)||(26583962-26584003)
[»] scaffold0058 (1 HSPs)
scaffold0058 (2-154)||(206-356)
[»] chr7 (38 HSPs)
chr7 (1-147)||(14422897-14423043)
chr7 (1-143)||(16009490-16009631)
chr7 (1-148)||(18873273-18873420)
chr7 (1-139)||(10895795-10895933)
chr7 (1-143)||(15168088-15168230)
chr7 (1-177)||(12709811-12709985)
chr7 (1-154)||(13122904-13123056)
chr7 (2-154)||(13743623-13743774)
chr7 (4-141)||(16677209-16677348)
chr7 (4-141)||(17651445-17651584)
chr7 (29-154)||(12590633-12590756)
chr7 (29-154)||(13007374-13007497)
chr7 (88-182)||(21230921-21231015)
chr7 (88-175)||(20311018-20311107)
chr7 (88-143)||(11382871-11382926)
chr7 (88-143)||(11389348-11389403)
chr7 (88-180)||(148619-148711)
chr7 (80-143)||(13679485-13679548)
chr7 (222-264)||(1613681-1613723)
chr7 (129-182)||(14945070-14945123)
chr7 (129-182)||(15372663-15372716)
chr7 (89-144)||(2971254-2971309)
chr7 (89-144)||(20906461-20906516)
chr7 (89-143)||(11311059-11311113)
chr7 (222-264)||(16677433-16677474)
chr7 (222-264)||(17651669-17651710)
chr7 (108-149)||(831628-831669)
chr7 (108-149)||(1196808-1196849)
chr7 (108-149)||(34958578-34958619)
chr7 (87-143)||(46625961-46626017)
chr7 (89-144)||(29181109-29181164)
chr7 (129-182)||(1613588-1613641)
chr7 (91-144)||(31155396-31155449)
chr7 (129-157)||(14280787-14280815)
chr7 (129-157)||(14287253-14287281)
chr7 (129-157)||(15722344-15722372)
chr7 (92-144)||(16091078-16091130)
chr7 (129-157)||(19600815-19600843)
[»] chr1 (17 HSPs)
chr1 (2-143)||(20437024-20437165)
chr1 (29-154)||(41111977-41112100)
chr1 (79-143)||(32651563-32651627)
chr1 (79-143)||(18712790-18712854)
chr1 (88-143)||(19663517-19663572)
chr1 (87-143)||(20805320-20805376)
chr1 (88-143)||(11158093-11158148)
chr1 (87-141)||(10811785-10811839)
chr1 (89-144)||(20851132-20851187)
chr1 (89-144)||(20857759-20857814)
chr1 (89-144)||(21706276-21706331)
chr1 (89-144)||(21710818-21710873)
chr1 (129-171)||(20595232-20595274)
chr1 (113-143)||(24476350-24476380)
chr1 (113-143)||(25091418-25091448)
chr1 (109-142)||(18271338-18271371)
chr1 (109-142)||(18275992-18276025)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-154)||(111794-111948)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-144)||(10195-10338)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-144)||(1525-1668)
[»] scaffold0090 (2 HSPs)
scaffold0090 (1-180)||(18082-18261)
scaffold0090 (222-265)||(18303-18345)
[»] scaffold0924 (1 HSPs)
scaffold0924 (3-154)||(740-892)
[»] scaffold1773 (2 HSPs)
scaffold1773 (1-151)||(1091-1240)
scaffold1773 (231-265)||(1317-1351)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-151)||(50092-50241)
scaffold0006 (231-265)||(50318-50352)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-141)||(14398-14539)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-154)||(1887-2039)
scaffold0117 (1-154)||(8564-8716)
[»] chr4 (17 HSPs)
chr4 (1-154)||(8045822-8045974)
chr4 (3-154)||(11848022-11848179)
chr4 (88-182)||(15408139-15408233)
chr4 (29-144)||(53483646-53483760)
chr4 (87-143)||(8834895-8834951)
chr4 (87-143)||(13888641-13888697)
chr4 (129-182)||(43284006-43284059)
chr4 (89-141)||(14486661-14486713)
chr4 (87-143)||(15245215-15245271)
chr4 (87-138)||(22724691-22724742)
chr4 (108-149)||(15747551-15747592)
chr4 (87-143)||(15308120-15308176)
chr4 (89-144)||(16146830-16146885)
chr4 (89-144)||(27906266-27906321)
chr4 (113-143)||(15069781-15069811)
chr4 (113-143)||(15076381-15076411)
chr4 (87-144)||(14912081-14912138)
[»] scaffold0796 (2 HSPs)
scaffold0796 (29-149)||(1727-1845)
scaffold0796 (29-149)||(5750-5868)
[»] scaffold0107 (1 HSPs)
scaffold0107 (88-182)||(40493-40587)
[»] scaffold0077 (2 HSPs)
scaffold0077 (2-141)||(3624-3763)
scaffold0077 (222-264)||(3498-3539)
[»] scaffold0456 (2 HSPs)
scaffold0456 (66-148)||(909-991)
scaffold0456 (66-148)||(8054-8136)
[»] scaffold0476 (2 HSPs)
scaffold0476 (2-141)||(3295-3435)
scaffold0476 (222-264)||(3169-3210)
[»] scaffold0019 (1 HSPs)
scaffold0019 (88-182)||(135473-135567)
[»] scaffold0235 (1 HSPs)
scaffold0235 (90-182)||(22554-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (88-175)||(17643-17731)
[»] scaffold0129 (1 HSPs)
scaffold0129 (31-150)||(45268-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (79-143)||(16811-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (79-143)||(116887-116951)
scaffold0004 (109-142)||(60441-60474)
[»] scaffold0461 (1 HSPs)
scaffold0461 (79-143)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (79-143)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (79-143)||(101928-101992)
[»] scaffold0124 (2 HSPs)
scaffold0124 (88-143)||(34276-34331)
scaffold0124 (87-144)||(35438-35495)
[»] scaffold0815 (1 HSPs)
scaffold0815 (92-154)||(1453-1515)
[»] scaffold0138 (1 HSPs)
scaffold0138 (87-143)||(12296-12352)
[»] scaffold2054 (1 HSPs)
scaffold2054 (91-154)||(717-780)
[»] scaffold0317 (1 HSPs)
scaffold0317 (80-143)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (88-143)||(14997-15052)
[»] scaffold0011 (2 HSPs)
scaffold0011 (222-264)||(153415-153457)
scaffold0011 (129-182)||(153322-153375)
[»] scaffold0348 (2 HSPs)
scaffold0348 (129-182)||(14615-14668)
scaffold0348 (89-144)||(9336-9391)
[»] scaffold0249 (3 HSPs)
scaffold0249 (136-180)||(2212-2256)
scaffold0249 (222-265)||(2128-2170)
scaffold0249 (91-144)||(13894-13947)
[»] scaffold0096 (1 HSPs)
scaffold0096 (87-147)||(39503-39563)
[»] scaffold0001 (1 HSPs)
scaffold0001 (89-153)||(493019-493082)
[»] scaffold1913 (1 HSPs)
scaffold1913 (222-265)||(970-1012)
[»] scaffold0790 (1 HSPs)
scaffold0790 (115-154)||(5480-5519)
[»] scaffold0609 (1 HSPs)
scaffold0609 (45-144)||(5857-5956)
[»] scaffold0535 (1 HSPs)
scaffold0535 (222-265)||(5078-5120)
[»] scaffold0127 (1 HSPs)
scaffold0127 (89-144)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (89-144)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (89-143)||(1913-1967)
[»] scaffold0261 (1 HSPs)
scaffold0261 (89-154)||(23559-23624)
[»] scaffold0335 (1 HSPs)
scaffold0335 (87-143)||(2628-2684)
[»] scaffold0643 (1 HSPs)
scaffold0643 (222-265)||(8822-8864)
[»] scaffold0239 (2 HSPs)
scaffold0239 (129-171)||(6327-6370)
scaffold0239 (129-171)||(13610-13653)
[»] scaffold0160 (1 HSPs)
scaffold0160 (234-265)||(16001-16032)
[»] scaffold0053 (1 HSPs)
scaffold0053 (89-144)||(79490-79545)
[»] scaffold0481 (1 HSPs)
scaffold0481 (97-142)||(676-721)
[»] scaffold0067 (1 HSPs)
scaffold0067 (129-170)||(46705-46746)
[»] scaffold0600 (1 HSPs)
scaffold0600 (87-143)||(732-788)
[»] scaffold0180 (1 HSPs)
scaffold0180 (94-143)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (89-141)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (87-143)||(121902-121958)
scaffold0031 (87-143)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (91-143)||(69749-69801)


Alignment Details
Target: scaffold0247 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 11254 - 11435
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11254 gaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 11353  T
Q  101 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11354 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 11435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 18800350 - 18800531
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18800350 gaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 18800449  T
Q  101 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18800450 ttatagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttcctagg 18800531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 23839111 - 23839253
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaa-actaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||    
T  23839111 gaattaacatgatcaatacccattccccttagaatcatcatcaaaccctaaccctcaatt-tatcttccaaacactatgcaattaggtcaattttcagaa 23839209  T
Q  100 attatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23839210 attatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 10986323 - 10986170
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||| ||||    
T  10986323 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaaactatgcaattaggtcaatttttagaa 10986225  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  10986224 attatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 4477770 - 4477912
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  4477770 gaattagcatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatt-tatcttccaaaaactatgcaattaggtcaattttcagaa 4477868  T
Q  100 attatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4477869 attatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 29614290 - 29614136
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||   |||||||||| || |||| |||||||||||||||||    
T  29614290 gaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttcagaa 29614191  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614190 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  9 atgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagat 108  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccattcccttcagaaacatcatcaaaccctaaccctcaatt-tatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  109 tatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 23057851 - 23057993
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |    
T  23057851 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagga 23057949  T
Q  100 attatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  23057950 attatagattatgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 12168305 - 12168428
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12168305 tcagaatcatcatcaaaccctaactttcatct-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 12168402  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||    
T  12168403 ctcacccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 19287214 - 19287337
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19287214 tcagaatcatcatcaaaccctaactttcatct-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 19287311  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||    
T  19287312 ctcacccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 19785982 - 19785859
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  ||| || |||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  19785982 tcagaatcatcatcaaaccctaactttcattt-tattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagt 19785885  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||    
T  19785884 ctcacccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 19878398 - 19878521
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19878398 tcagaatcatcatcaaaccctaactttcatct-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 19878495  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||    
T  19878496 ctcacccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 19884174 - 19884297
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19884174 tcagaatcatcatcaaaccctaactttcatct-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 19884271  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    |||||||| |||||||||||||||||    
T  19884272 ctcaccctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 21565353 - 21565214
Alignment:
Q  2 aattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaat 101  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||  | |||   ||||||||||||||||||||| |||||    
T  21565353 aattaacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaat 21565255  T
Q  102 tatagattat-gattattgagagatagtctcacccttacct 141  Q
    || | |||||  |||| ||||||||||||||||||||||||    
T  21565254 taaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 24512899 - 24512805
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttcctagg 24512805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 34640068 - 34639986
Alignment:
Q  62 tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34640068 tattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 34646742 - 34646660
Alignment:
Q  62 tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34646742 tattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 25469816 - 25469679
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||| |||||||||||||||   |||  | ||||||||||||| |  ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatat-tattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagt 25469720  T
Q  129 ctcacccttaccttagttttgcagaaggatt-acacagcaa 168  Q
    |||||||||||||||| ||   ||||||||| |||||||||    
T  25469719 ctcacccttaccttagattgtaagaaggattaacacagcaa 25469679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 141  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 933666 - 933614
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctag 181  Q
    |||||||||||||||| ||||||||| |||| || ||||||||||||||||||    
T  933666 ctcacccttaccttagatttgcagaaagattgcatagcaaaatcggttcctag 933614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 31252379 - 31252478
Alignment:
Q  45 accctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||  ||||||| ||| ||| | |||||  ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252379 accctaattctcaattttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 21565129 - 21565088
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  21565129 ccaaaagct-agttttcttacgtaaaaacgttctgactgtttt 21565088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 18800571 - 18800612
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttt 263  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  18800571 ccaaaaacttagttttcttacgtaaaaacgtactgactgttt 18800612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 265
Target Start/End: Complemental strand, 930011 - 929977
Alignment:
Q  231 tagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||||||||||||||||| |||||||||||    
T  930011 tagttttcttacgtaaaaacgttttgactgttttt 929977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 141  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  109 tatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  109 tatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 11288721 - 11288668
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 157
Target Start/End: Original strand, 1593749 - 1593777
Alignment:
Q  129 ctcacccttaccttagttttgcagaagga 157  Q
    |||||||||||||||||||||||||||||    
T  1593749 ctcacccttaccttagttttgcagaagga 1593777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 21723915 - 21723887
Alignment:
Q  129 ctcacccttaccttagttttgcagaagga 157  Q
    |||||||||||||||||||||||||||||    
T  21723915 ctcacccttaccttagttttgcagaagga 21723887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 144
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  116 attgagagatagtctcacccttaccttag 144  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 29415591 - 29415551
Alignment:
Q  109 tatgattattgagagatagtctcacccttaccttagttttg 149  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttg 29415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 29614069 - 29614029
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtt 262  Q
    ||||||||||| | |||||||||||||||||| ||||||||    
T  29614069 ccaaaagcttaatgttcttacgtaaaaacgttttgactgtt 29614029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 38144678 - 38144500
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  38144678 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatt-tattttccaaaattatgcaattaggtcaattttcagaaa 38144580  T
Q  101 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  38144579 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 38144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 28370196 - 28370055
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  28370196 gaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaa 28370098  T
Q  101 ttatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28370097 ttatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 19512299 - 19512441
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  19512299 gaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatt-tatcttccaaaaactatgcaattaggtcaattttcagaa 19512397  T
Q  100 attatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19512398 attatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 22751054 - 22751201
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  22751054 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaa 22751152  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagtttt 148  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22751153 attatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 23528573 - 23528690
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23528573 tcagaatcatcatcaaaccctaactttcatct-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 23528670  T
Q  129 ctcacccttaccttagtttt 148  Q
    ||||||||||||||||||||    
T  23528671 ctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 22438803 - 22438715
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaaggattacacagcaaaatcggt 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagcaaattcggt 22438715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 42961566 - 42961658
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    |||||||||||||| ||| ||||| || |||||  | ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 42961658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 1856497 - 1856445
Alignment:
Q  128 tctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 1856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 21674467 - 21674415
Alignment:
Q  128 tctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 21674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 144
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  115 tattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 34830029 - 34830149
Alignment:
Q  33 aatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 132  Q
    ||||| ||||| |||||||  ||||||| ||| ||| | |||||  | ||||| |  |||||||||||||||| ||||  |||||||| ||||| || ||    
T  34830029 aatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatccca 34830127  T
Q  133 cccttaccttagttttgcagaa 154  Q
    ||||||||||||  ||||||||    
T  34830128 cccttaccttagaattgcagaa 34830149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 757459 - 757431
Alignment:
Q  129 ctcacccttaccttagttttgcagaagga 157  Q
    |||||||||||||||||||||||||||||    
T  757459 ctcacccttaccttagttttgcagaagga 757431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 4 - 182
Target Start/End: Original strand, 30772 - 30951
Alignment:
Q  4 ttaacatgatcaatac-ccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatt 102  Q
    |||||||||||  ||| |||||||||||| ||||||||||||||||||| |||||||| ||  ||||||||||| |||||||||||||||||||||||||    
T  30772 ttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaatt 30871  T
Q  103 atagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30872 atagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcgattcctagg 30951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 30991 - 31034
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30991 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 31034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 111599 - 111741
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  111599 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaa 111697  T
Q  101 ttatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  111698 ttatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 11993 - 11834
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  11993 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatt-tattttccaaaactatgcaattaggtcaattttcagaa 11895  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggatta 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11894 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagatta 11834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 11771 - 11728
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  11771 ccaaaagcttagttttcttacataaaaacgttctgactgttttt 11728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 44477536 - 44477678
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  44477536 gaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaa 44477634  T
Q  101 ttatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44477635 ttatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 44492694 - 44492836
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  44492694 gaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaa 44492792  T
Q  101 ttatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44492793 ttatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23866528 - 23866680
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| | || || |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |    
T  23866528 gaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-cagga 23866625  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23866626 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 8727875 - 8727735
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  8727875 gaattaacatgatcaatacccatacccctcagaatcatcgtcaaaccctaaccctcaatt-tatcttccaaaaactatgcaattaggtcaattttcagaa 8727777  T
Q  100 attatagattatgattattgagagatagtctcacccttacct 141  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  8727776 attatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 17054533 - 17054656
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  17054533 tcagaatcatcatcaaaccctaactttcatct-tattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagt 17054630  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    |||||||||||||| |||||||||||    
T  17054631 ctcacccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 27940996 - 27940815
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattct-attttccaa-aactaagcaattaggtcaattttcaga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||| ||| ||| |  | | |    |||||||||||    
T  27940996 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaattcccaattcttatttttcaagaacaattctaatcaaacaattttcaga 27940897  T
Q  99 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||| ||| ||||| || |||||  | ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  27940896 aatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 27940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 14056619 - 14056525
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttcctagg 14056525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  33 aatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 132  Q
    ||||| ||| |||||||||  ||||||| ||| ||| | ||| |  ||||| | ||||||||||||||||||| || |||||||||||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  133 cccttacctta 143  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 25111976 - 25112070
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||| |||| |||| |||| ||||||||||| |||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaagattgcacaacaaaatcggtttctagg 25112070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 21325794 - 21325730
Alignment:
Q  116 attgagagatagtctcacccttaccttagttttgcag-aaggattacacagcaaaatcggttcct 179  Q
    |||||||| ||| |||||||||||||||| ||||||| ||| ||| |||||||||||||||||||    
T  21325794 attgagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21325730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 30765925 - 30765873
Alignment:
Q  128 tctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||||||||||| ||| | |||||| ||||||||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 30765873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 21321192 - 21321132
Alignment:
Q  120 agagatagtctcacccttaccttagttttgcag-aaggattacacagcaaaatcggttcct 179  Q
    |||| ||||||| |||||||||||| ||||||| ||| ||| |||||||||||||||||||    
T  21321192 agagttagtctcgcccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 22381057 - 22381121
Alignment:
Q  116 attgagagatagtctcacccttaccttagttttgcagaagga-ttacacagcaaaatcggttcct 179  Q
    |||||||| ||| ||||| |||||||||| ||||||||| || || |||||||||||||||||||    
T  22381057 attgagagttagcctcactcttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 22381121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 9534241 - 9534382
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  9534241 gaattaacatgatcaatacccattccactcagaatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaa 9534339  T
Q  101 ttatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9534340 ttatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 23370648 - 23370505
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  23370648 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatt-tatcttccaaaaactatgcaattaggtcaattttcagaa 23370550  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  23370549 attatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 20247930 - 20247791
Alignment:
Q  2 aattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  20247930 aattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaa 20247832  T
Q  101 ttatagattatgattattgagagatagtctcacccttacct 141  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20247831 ttatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14762900 - 14762758
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  14762900 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaa 14762802  T
Q  100 attatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  14762801 attatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 16801606 - 16801440
Alignment:
Q  4 ttaacatgatcaatac-ccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatt 102  Q
    |||||||||||| ||| |||||| ||||| |||||||||||| |||||||| |||||| ||| ||| ||| ||||||||| |||||||||||||||||||    
T  16801606 ttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaatt 16801508  T
Q  103 atagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaat 171  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16801507 atatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaat 16801440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 24192868 - 24193009
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcaga 98  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||    
T  24192868 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaaactatgcaattaggtcaattttcaga 24192966  T
Q  99 aattatagattatgattattgagagatagtctcacccttacct 141  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24192967 aattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 38310942 - 38310802
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||    
T  38310942 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaatattcagaa 38310844  T
Q  100 attatagattatgattattgagagatagtctcacccttacct 141  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  38310843 attatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 41455210 - 41455087
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    |||||||||||||||| ||||||   ||| | ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41455210 tcagaatcatcatcaatccctaattttca-tcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 41455113  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||    
T  41455112 ctcacccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 24933941 - 24933828
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    |||||||||||||||||||||||   |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24933941 tcagaatcatcatcaaaccctaattttcatat-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 24933844  T
Q  129 ctcacccttaccttag 144  Q
    ||||||||||||||||    
T  24933843 ctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 55499244 - 55499104
Alignment:
Q  2 aattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaatttt-cagaaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||  | |||   |||||| ||||||||||||| | ||||    
T  55499244 aattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcagttaggtcaattttcccgaaa 55499146  T
Q  101 ttatagattat-gattattgagagatagtctcacccttacct 141  Q
    ||| | |||||  |||| ||||||||||||||||||||||||    
T  55499145 ttacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  82 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 16798620 - 16798577
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  16798620 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 16798577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 24122273 - 24122221
Alignment:
Q  128 tctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 13967814 - 13967762
Alignment:
Q  128 tctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||||||||||| ||| | |||||| ||||||||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 13973289 - 13973237
Alignment:
Q  128 tctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||||||||||| ||| | |||||| ||||||||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 55499019 - 55498978
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  55499019 ccaaaagct-agttttcttacgtaaaaacgttctgactgtttt 55498978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    |||||||||||||||||||||||   |||  | |||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| |    
T  10389557 tcagaatcatcatcaaaccctaattttcatat-tattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataat 10389459  T
Q  129 ctcacccttaccttag 144  Q
    | ||||||||||||||    
T  10389458 cccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    |||||||||||||||||||||||   |||  | |||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| |    
T  10414646 tcagaatcatcatcaaaccctaattttcatat-tattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataat 10414548  T
Q  129 ctcacccttaccttag 144  Q
    | ||||||||||||||    
T  10414547 cccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    |||||||||||||||||||||||   |||  | |||| |  |||||||  ||||||| | | ||||||||||||||| ||||| || ||||| ||||| |    
T  10421316 tcagaatcatcatcaaaccctaattttcatat-tattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataat 10421218  T
Q  129 ctcacccttaccttag 144  Q
    | ||||||||||||||    
T  10421217 cccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  109 tatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 14651904 - 14651862
Alignment:
Q  129 ctcacccttaccttagttttgcagaagg-attacacagcaaaa 170  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  14651904 ctcacccttaccttagttttgcagaaggaaatacacagcaaaa 14651862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 141  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 18718311 - 18718261
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcct 179  Q
    ||||||||||||||||  ||||||||| | | |||||||||||||||||||    
T  18718311 ctcacccttaccttagaattgcagaagaaatgcacagcaaaatcggttcct 18718261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  108 ttatgattattgagagatagtctcacccttaccttag 144  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 10833359 - 10833303
Alignment:
Q  93 ttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 149  Q
    ||||||| ||||| | |||||||| |||  | |||||||||||||||||||||||||    
T  10833359 ttcagaatttatacactatgattactgaatgttagtctcacccttaccttagttttg 10833303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 18127733 - 18127693
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaa 169  Q
    ||||||||||||||||||||||||||  | |||||||||||    
T  18127733 ctcacccttaccttagttttgcagaaaaaatacacagcaaa 18127693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 18135503 - 18135463
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaa 169  Q
    ||||||||||||||||||||||||||  | |||||||||||    
T  18135503 ctcacccttaccttagttttgcagaaaaaatacacagcaaa 18135463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 6483631 - 6483772
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  6483631 gaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaa 6483729  T
Q  101 ttatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6483730 ttatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 6487098 - 6487239
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  6487098 gaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaa 6487196  T
Q  101 ttatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6487197 ttatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19661595 - 19661454
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  19661595 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaa 19661497  T
Q  101 ttatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  19661496 ttatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 26583744 - 26583892
Alignment:
Q  4 ttaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 103  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  26583744 ttaacatgatcattaccctttcccctcagaatcatcatcaagccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-cagaaatta 26583841  T
Q  104 tagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583842 tagattatgattattgagagatagtctcacccttaccttagttttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 23101604 - 23101463
Alignment:
Q  2 aattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaat 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||  | |||   ||| ||||||||||||||||| |||||    
T  23101604 aattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaattaggtcaattttccgaaat 23101506  T
Q  102 tatagattat-gattattgagagatagtctcacccttacctta 143  Q
    || | |||||  |||| ||||||||||||||||||||||||||    
T  23101505 tacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 23089196 - 23089057
Alignment:
Q  2 aattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaat 101  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||  | |||   ||||||||||||||||||||| |||||    
T  23089196 aattaacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaat 23089098  T
Q  102 tatagattat-gattattgagagatagtctcacccttacct 141  Q
    || | |||||  |||| ||||||||||||||||||||||||    
T  23089097 taaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctca-attctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatag 127  Q
    |||||||||||||||||||||||   ||| ||| | ||||| |||||||  ||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattat-ttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattaatgagagatag 5706040  T
Q  128 tctcacccttaccttag 144  Q
    |||||||||||||||||    
T  5706039 tctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 23878922 - 23879060
Alignment:
Q  2 aattaacatgatcaataccc-attcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||  ||  || ||   ||||||||||||||||||||  ||||    
T  23878922 aattaacatgatcattaccccattcccctcagaatcatcaacaa-ccctaaccctcaatttaatcctc-aaggttaagcaattaggtcaatttttcgaaa 23879019  T
Q  101 ttatagattatgattattgagagatagtctcacccttacct 141  Q
    ||||| || || |||| ||||||||||||||||||||||||    
T  23879020 ttatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  82 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 180
Target Start/End: Complemental strand, 6260227 - 6260135
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    |||||||||||||  ||| ||||| ||  ||||  | ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  6260227 caattttcagaaaccatatattataatcgttgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 6260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 19665081 - 19665037
Alignment:
Q  136 ttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcggttccta 19665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 23101380 - 23101339
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  23101380 ccaaaagct-agttttcttacgtaaaaacgttctgactgtttt 23101339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 26885183 - 26885246
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 153  Q
    ||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||  |||||||    
T  26885183 aattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 6260093 - 6260051
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  6260093 ccaaaagct-agttttcttacgttaaaacgttctgactgttttt 6260051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 23168351 - 23168288
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 23579608 - 23579545
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 26583962 - 26584003
Alignment:
Q  224 aaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||| | |||||||||||||||||| |||||||||||    
T  26583962 aaaagcttaatgttcttacgtaaaaacgttttgactgttttt 26584003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 206 - 356
Alignment:
Q  2 aattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaat 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  206 aattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-cagaaat 303  T
Q  102 tatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  304 tatagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 7e-64; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 14422897 - 14423043
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  14422897 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaaactatgcaattaggtcaattttcagaa 14422995  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422996 attatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 16009490 - 16009631
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||| ||||||||| | |||||||||||||||||||||||    
T  16009490 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccttaacccacaatt-tatcttccaaaaccatgcaattaggtcaattttcagaaa 16009588  T
Q  101 ttatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16009589 ttatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 18873273 - 18873420
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  18873273 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaa 18873371  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagtttt 148  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18873372 attatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 10895933 - 10895795
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||| ||||||||||||||||||| ||    
T  10895933 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatt-tatcttccaaaaactatgcaattaggtcaattttcaaaa 10895835  T
Q  100 attatagattatgattattgagagatagtctcacccttac 139  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10895834 attatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 15168088 - 15168230
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  15168088 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaa 15168186  T
Q  100 attatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  15168187 attatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 12709985 - 12709811
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| | || || |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |    
T  12709985 gaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-cagga 12709888  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaa-aatcggttc 177  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||    
T  12709887 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa--attagacagcaagaatcggttc 12709811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13123056 - 13122904
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| | || || |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |    
T  13123056 gaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-cagga 13122959  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13122958 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 13743623 - 13743774
Alignment:
Q  2 aattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    |||||||||||||| |||||||| | || || |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| ||    
T  13743623 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-caggaa 13743720  T
Q  101 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13743721 ttataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 16677209 - 16677348
Alignment:
Q  4 ttaacatgatcaatac-ccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaaat 101  Q
    |||||||||||| ||| |||| | ||||| ||||||||||||||||||||||| |||| ||| |||||||| ||| ||||||||||||||||| ||||||    
T  16677209 ttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaat 16677308  T
Q  102 tatagattatgattattgagagatagtctcacccttacct 141  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16677309 tatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 17651445 - 17651584
Alignment:
Q  4 ttaacatgatcaatac-ccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaaat 101  Q
    |||||||||||| ||| |||| | ||||| ||||||||||||||||||||||| |||| ||| |||||||| ||| ||||||||||||||||| ||||||    
T  17651445 ttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaat 17651544  T
Q  102 tatagattatgattattgagagatagtctcacccttacct 141  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17651545 tatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 12590756 - 12590633
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12590756 tcagaatcatcatcaaaccctaactttcatat-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 12590659  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||    
T  12590658 ctcacccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 13007374 - 13007497
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13007374 tcagaatcatcatcaaaccctaactttcatct-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 13007471  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||    
T  13007472 ctcacccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 21231015 - 21230921
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcctagg 21230921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 20311107 - 20311018
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag--ttttgcagaaggattacacagcaaaatcggt 175  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagcaaattcggt 20311018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 148619 - 148711
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||||||||||||||||| ||||||||| || |||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatcagttccta 148711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  80 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 1613681 - 1613723
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  1613681 ccaaaagcttagttttcttacgtaaaaacgttctgactctttt 1613723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 14945123 - 14945070
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||| |||||||||| | | ||||||||||||||||||||||    
T  14945123 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttcctagg 14945070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 15372716 - 15372663
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||| |||||||||| | | ||||||||||||||||||||||    
T  15372716 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttcctagg 15372663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 16677433 - 16677474
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  16677433 ccaaaagct-agttttcttacgtaaaaacgttctgactgtttt 16677474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 17651669 - 17651710
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  17651669 ccaaaagct-agttttcttacgtaaaaacgttctgactgtttt 17651710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  108 ttatgattattgagagatagtctcacccttaccttagttttg 149  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  108 ttatgattattgagagatagtctcacccttaccttagttttg 149  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  108 ttatgattattgagagatagtctcacccttaccttagttttg 149  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 1613588 - 1613641
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    ||||||||||||||||  | ||| || |||| ||||||||||||||||||||||    
T  1613588 ctcacccttaccttagaatcgcaaaaagattgcacagcaaaatcggttcctagg 1613641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 14280815 - 14280787
Alignment:
Q  129 ctcacccttaccttagttttgcagaagga 157  Q
    |||||||||||||||||||||||||||||    
T  14280815 ctcacccttaccttagttttgcagaagga 14280787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 14287281 - 14287253
Alignment:
Q  129 ctcacccttaccttagttttgcagaagga 157  Q
    |||||||||||||||||||||||||||||    
T  14287281 ctcacccttaccttagttttgcagaagga 14287253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 15722372 - 15722344
Alignment:
Q  129 ctcacccttaccttagttttgcagaagga 157  Q
    |||||||||||||||||||||||||||||    
T  15722372 ctcacccttaccttagttttgcagaagga 15722344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  92 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 157
Target Start/End: Original strand, 19600815 - 19600843
Alignment:
Q  129 ctcacccttaccttagttttgcagaagga 157  Q
    |||||||||||||||||||||||||||||    
T  19600815 ctcacccttaccttagttttgcagaagga 19600843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 7e-61; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 20437165 - 20437024
Alignment:
Q  2 aattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||    
T  20437165 aattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaaactatgcaattaggtcaattttcagaaa 20437067  T
Q  101 ttatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20437066 ttatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 41111977 - 41112100
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||| ||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatct-tatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagt 41112074  T
Q  129 ctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||    
T  41112075 ctcacccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 141  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 20595274 - 20595232
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaat 171  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  20595274 ctcacccttaccttagttttgcagaaggaatgcacagcaaaat 20595232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  113 attattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  113 attattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  109 tatgattattgagagatagtctcacccttacctt 142  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  109 tatgattattgagagatagtctcacccttacctt 142  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 111794 - 111948
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaatttt-caga 98  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||    
T  111794 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaatttttcaga 111892  T
Q  99 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111893 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10338 - 10195
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  10338 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatt-tatcttccaaaaactatgcaattaggtcaattttcagaa 10240  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  10239 attatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1668 - 1525
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  1668 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatt-tatcttccaaaaactatgcaattaggtcaattttcagaa 1570  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  1569 attatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 18082 - 18261
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttcc-aaaactaagcaattaggtcaattttcagaa 99  Q
    |||||||||||| || ||||  ||||| | ||||||||||| ||||| |||||||||||| |||||||| ||| ||||||||||||||||||||||| ||    
T  18082 gaattaacatgaccattaccatttcccgttagaatcatcattaaaccttaaccctcaatt-tattttcctaaagctaagcaattaggtcaattttcaaaa 18180  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||    
T  18181 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacaacacaatcggttccta 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 18303 - 18345
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  18303 ccaaaagct-agttttcttacgtaaaaacgttctgactgttttt 18345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 892 - 740
Alignment:
Q  3 attaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcagaaa 100  Q
    |||| |||||||| |||||||| |||| || |||| ||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  892 attatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatt-tattttccaaaaactatgcaattaggtcaattttcagaaa 794  T
Q  101 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  793 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 1091 - 1240
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| || |||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |    
T  1091 gaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-cagga 1188  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgca 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1189 attatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 1317 - 1351
Alignment:
Q  231 tagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||||||||||||||||| |||||||||||    
T  1317 tagttttcttacgtaaaaacgttttgactgttttt 1351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 50092 - 50241
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    ||||||||||||||| |||||||| |||| || |||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |    
T  50092 gaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-cagga 50189  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgca 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50190 attatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 265
Target Start/End: Original strand, 50318 - 50352
Alignment:
Q  231 tagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||||||||||||||||| |||||||||||    
T  50318 tagttttcttacgtaaaaacgttttgactgttttt 50352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 14539 - 14398
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaagcaattaggtcaattttcaga 98  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||    
T  14539 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaaactatgcaattaggtcaattttcaga 14441  T
Q  99 aattatagattatgattattgagagatagtctcacccttacct 141  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14440 aattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 2039 - 1887
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaatttt-cagaa 99  Q
    |||||||||| |||| ||||||||||  ||| |||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||| |||||    
T  2039 gaattaacataatcattacccattcca-tcaaaatcatcatcaaaccctaaccctcaaat-tattttccaaaactatacaattaggtcaatttttcagaa 1942  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1941 attatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8716 - 8564
Alignment:
Q  1 gaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaatttt-cagaa 99  Q
    |||||||||| |||| ||||||||||  ||| |||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||| |||||    
T  8716 gaattaacataatcattacccattcca-tcataatcatcatcaaaccctaaccctcaaat-tattttccaaaactatacaattaggtcaatttttcagaa 8619  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8618 attatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8045974 - 8045822
Alignment:
Q  1 gaattaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaa 99  Q
    |||||||||| |||  |||||||| |||| ||||||  || |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||    
T  8045974 gaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattt-cagaa 8045877  T
Q  100 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8045876 attatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 11848022 - 11848179
Alignment:
Q  3 attaacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaattct-----attttccaaaactaagcaattaggtcaattttca 96  Q
    ||||||||||||| |||||||||| || ||||||| |||||||||||||||||||||||       ||||| |||||||| || | ||||||||||||||    
T  11848022 attaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaattttca 11848121  T
Q  97 gaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848122 ggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 15408139 - 15408233
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||| ||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttcctagg 15408233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 53483646 - 53483760
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctca-attctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatag 127  Q
    |||||||||||||||||||||||   ||| ||| | ||||| |||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattat-ttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatag 53483743  T
Q  128 tctcacccttaccttag 144  Q
    |||||||||||||||||    
T  53483744 tctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 43284059 - 43284006
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||| ||||||||| |||| |||||| |||||||||||||||    
T  43284059 ctcacccttaccttagatttgcagaaagattgcacagcgaaatcggttcctagg 43284006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 141  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 138  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  108 ttatgattattgagagatagtctcacccttaccttagttttg 149  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 27906266 - 27906321
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  113 attattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  113 attattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 1845 - 1727
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  1845 tcagaatcatcatcaaaccctaactttcatat-tattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagt 1748  T
Q  129 ctcacccttaccttagttttg 149  Q
    |||||||||||||||||||||    
T  1747 ctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 5868 - 5750
Alignment:
Q  29 tcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagt 128  Q
    ||||||||||||||||||||||||  |||  | |||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  5868 tcagaatcatcatcaaaccctaactttcatat-tattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagt 5771  T
Q  129 ctcacccttaccttagttttg 149  Q
    |||||||||||||||||||||    
T  5770 ctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 40587 - 40493
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcctagg 40493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 3763 - 3624
Alignment:
Q  2 aattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaat 101  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||  | |||   ||||||||||||||||||||| |||||    
T  3763 aattaacatgatcattacccatccccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaat 3665  T
Q  102 tatagattat-gattattgagagatagtctcacccttacct 141  Q
    || | |||||  |||| ||||||||||||||||||||||||    
T  3664 tacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 3539 - 3498
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  3539 ccaaaagct-agttttcttacgtaaaaacgttatgactgtttt 3498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 909 - 991
Alignment:
Q  66 ttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 148  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  909 ttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 8054 - 8136
Alignment:
Q  66 ttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 148  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8054 ttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 3435 - 3295
Alignment:
Q  2 aattaacatgat-caatacccattcccctcagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaa 100  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || |  ||||   ||||||||||||||||||||| ||||    
T  3435 aattaacatgattcattacccattcccctcagaatcatcatcaaaccctaaccctcaatttta-tccccaaggttaagcaattaggtcaattttccgaaa 3337  T
Q  101 ttatagattat-gattattgagagatagtctcacccttacct 141  Q
    ||| | |||||  |||| ||||||||||||||||||||||||    
T  3336 ttacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 3210 - 3169
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  3210 ccaaaagct-agttttcttacgtaaaaacgttatgactgtttt 3169  T

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Target: scaffold0019 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 135473 - 135567
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||||||||||||| ||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttcttagg 135567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 22646 - 22554
Alignment:
Q  90 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||  ||| ||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttcctagg 22554  T

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Target: scaffold0310 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 17643 - 17731
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaaggattacacagcaaaatcggt 175  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagcaaattcggt 17731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  31 agaatcatcatcaaaccctaaccctca-attctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 129  Q
    |||||||||||||||||||||   ||| ||| | ||||| |||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattat-ttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtc 45289  T
Q  130 tcacccttaccttagttttgc 150  Q
    ||||||||||||||| |||||    
T  45288 tcacccttaccttagatttgc 45268  T

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Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  109 tatgattattgagagatagtctcacccttacctt 142  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

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Target: scaffold0461 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  79 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  92 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 717 - 780
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||| |||| ||| ||||| ||||| || ||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcagaa 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  80 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  88 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 153415 - 153457
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgtttt 264  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  153415 ccaaaagcttagttttcttacgtaaaaacgttctgactctttt 153457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 153322 - 153375
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    ||||||||||||||||  | |||||| |||| || |||||||||||||||||||    
T  153322 ctcacccttaccttagaatcgcagaaagattgcatagcaaaatcggttcctagg 153375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 14668 - 14615
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctagg 182  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||    
T  14668 ctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcatagg 14615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 2256 - 2212
Alignment:
Q  136 ttaccttagttttgcagaaggattacacagcaaaatcggttccta 180  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcggttccta 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 2170 - 2128
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  2170 ccaaaagct-agttttcttacgttaaaacgttctgactgttttt 2128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 13947 - 13894
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 147  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 493082 - 493019
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 153  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1913 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1913
Description:

Target: scaffold1913; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 970 - 1012
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  970 ccaaaagct-agttttcttacgtaaaaacgttctgactgttttt 1012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 5480 - 5519
Alignment:
Q  115 tattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaa 5519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 5956 - 5857
Alignment:
Q  45 accctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    |||||||  ||||||| ||| ||| | |||||  ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5956 accctaattctcaattttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 5120 - 5078
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  5120 ccaaaagct-agttttcttacgtaaaaacgttctgactgttttt 5078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 23624 - 23559
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 154  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||  ||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 8864 - 8822
Alignment:
Q  222 ccaaaagcttagttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  8864 ccaaaagct-agttttcttacgttaaaacgttctgactgttttt 8822  T

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Target: scaffold0239 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 6370 - 6327
Alignment:
Q  129 ctcacccttaccttagttttgcagaagg-attacacagcaaaat 171  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  6370 ctcacccttaccttagttttgcagaaggaaatacacagcaaaat 6327  T

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Target: scaffold0239; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 13653 - 13610
Alignment:
Q  129 ctcacccttaccttagttttgcagaagg-attacacagcaaaat 171  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  13653 ctcacccttaccttagttttgcagaaggaaatacacagcaaaat 13610  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 265
Target Start/End: Original strand, 16001 - 16032
Alignment:
Q  234 ttttcttacgtaaaaacgttctgactgttttt 265  Q
    ||||||||||||||||||||||||||||||||    
T  16001 ttttcttacgtaaaaacgttctgactgttttt 16032  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 144  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  97 gaaattatagattatgattattgagagatagtctcacccttacctt 142  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 46746 - 46705
Alignment:
Q  129 ctcacccttaccttagttttgcagaaggattacacagcaaaa 170  Q
    ||||||||||||||||||||||||||| | | ||||||||||    
T  46746 ctcacccttaccttagttttgcagaagaaatgcacagcaaaa 46705  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 732 - 788
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  94 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 143  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  89 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 141  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  87 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 69749 - 69801
Alignment:
Q  91 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 143  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta 69801  T

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