View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6410_high_6 (Length: 394)
Name: NF6410_high_6
Description: NF6410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6410_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 2 - 378
Target Start/End: Complemental strand, 26902092 - 26901716
Alignment:
| Q |
2 |
gcagcacagagaaccaaagacatcgtcgccgccgaaccaccggtgcttccaccgttcgattacgttccgccatcgtattccggtccttccggagaccacg |
101 |
Q |
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| T |
26902092 |
gcagcagaaagaaccaaagacaacgtcgccgccgaaccaccggtgcttccaccgttcgattacgttccgccatcgtattccggtccttccggcgaccacg |
26901993 |
T |
|
| Q |
102 |
ttctcgcgaagcgtagggaatatctcagtccgtcgatcatgcatttctacaaatctccggtgaggatccgccgccgtacctgataactaactaactactt |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
26901992 |
ttctcgcgaagcgtagggaatatctcagtccgtcgatcatgcatttctacaaatctccggtgaggatccgccgccgtaccggataactaactaactactt |
26901893 |
T |
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| Q |
202 |
tcgtcaataattaactgtaatttaattctgctattatcatgttaaaattcaacagtaactaaaattaatttactaaatgatgatgatgacgataattaac |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26901892 |
tcgtcaataattaactgtaatttaattctgctattatcatgttaaaattcaacagtaactaaaattaatttactaaatgatgatgatgacgataattaac |
26901793 |
T |
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| Q |
302 |
ttatgattaattgtgtttttgcggaattatgattgtgtatgtgatggtgcagctgaacatcgtggaagggaagaagc |
378 |
Q |
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|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26901792 |
ttatgaataattgtgtttttgcgggattatgattgtgtatgtgatggtgcagctgaacatcgtggaagggaagaagc |
26901716 |
T |
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