View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6412_high_13 (Length: 239)
Name: NF6412_high_13
Description: NF6412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6412_high_13 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 1217168 - 1216945
Alignment:
| Q |
16 |
gcaacttaacggcatcttcttcaggtgagtttttgagctttaaaacacatgagaatttctctagtgatatacacataagcagaaaataagataaatggaa |
115 |
Q |
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| T |
1217168 |
gcaacttaacggcatcttcttcaggtgagtttttgagctttaaaacacatgagaatttctctagtgatatacacataagcagaaaataagataaatggaa |
1217069 |
T |
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| Q |
116 |
aatttgaagttcaaatcttgcatgacttgagatcacatggaattccttttaattataatgcagactgcattttcacataccttgcaaaacttcagatcgc |
215 |
Q |
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| T |
1217068 |
aatttgaagttcaaatcttgcacgacttgagatcacatggaattccttttaattataatgcagactgcattttcacataccttgcaaaacttcagattgc |
1216969 |
T |
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| Q |
216 |
aaggattttgttttaattatattc |
239 |
Q |
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|||||||||||||||||||||||| |
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| T |
1216968 |
aaggattttgttttaattatattc |
1216945 |
T |
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