View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6413_high_19 (Length: 232)
Name: NF6413_high_19
Description: NF6413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6413_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 38117242 - 38117465
Alignment:
| Q |
1 |
gtccttataatataaacatct--atcctcaaattcaaattacttgcaaatcattcctcattgtgaattttgaaatttttatgcatgattgtatggtagac |
98 |
Q |
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| T |
38117242 |
gtccttataatataaacatctgtatcctcaaattcaaattacttgcaaatcattcctcattgtgaattttgaaatttttatgcatgattgtatggtagac |
38117341 |
T |
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| Q |
99 |
tacaaatgtgaaattctaatactcaaatttctattaaatttaacaaatcgtcttgctctatcctcacatttaaattttccactcatttggaattttcaat |
198 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38117342 |
tacaaatgtaaaattctaatactcaaatttctattaaatttaacaaatcgtcttgctctatcctcacatttaaattttccactcatttggaattttcaat |
38117441 |
T |
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| Q |
199 |
tttctattaacataatgaaacttg |
222 |
Q |
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|||||||||||||||||||||||| |
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| T |
38117442 |
tttctattaacataatgaaacttg |
38117465 |
T |
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