View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6413_low_20 (Length: 254)
Name: NF6413_low_20
Description: NF6413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6413_low_20 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 9471122 - 9471375
Alignment:
| Q |
1 |
aatatgaaatctccaaatccatttgaacttgaattcgccaagtttgactttttggtagttccctattcaaattgacccaaacactcaaaatcttagtcaa |
100 |
Q |
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| T |
9471122 |
aatatgaaatctccaaatccatttgaacttgaattcgccaagtttgactttttggtagttccctattcaaattgacccaaacactcaaaatcttagtcaa |
9471221 |
T |
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| Q |
101 |
aaggtaagaatatgtacagtgtagtgaaatttcaccaaaggaataaaagattctacctcagcattagatgtttttgtgctagcaatctttgcagcaaacc |
200 |
Q |
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| T |
9471222 |
aaggtaagaatatgtacagtgtagtgaaatttcaccaaaggaataaaagattctacctcagcattagatgtttttgtgctagcaatctttgcagcaaacc |
9471321 |
T |
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| Q |
201 |
tcctaatataacagtaaagcaagataagtccatcatcattttaacaaaacttgc |
254 |
Q |
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| T |
9471322 |
tcctaatataacagtaaagcaagataagtccatcatcattttaacaaaacttgc |
9471375 |
T |
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