View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6415_high_5 (Length: 251)
Name: NF6415_high_5
Description: NF6415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6415_high_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 12022298 - 12022058
Alignment:
| Q |
11 |
cacagagggaaaatcaagttcattttctggatgcaacagtacacacaaaaccaaaacaatgtggttcttcttccatgcaacactatatcatttgatagaa |
110 |
Q |
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| T |
12022298 |
cacagagggaaaatcaagttcattttctggatgcaacagtacacacaaaaccaaaacaatgtggttcttcttccatgcaacactatatcatttgatagaa |
12022199 |
T |
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| Q |
111 |
attaatatgaacttatatccaaccaacctgtagtgtggcggtgacattgtacctgggaagcttcctgtaatcaaatatcagagtgagttttttgtttgaa |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
12022198 |
attaatatgaacttatatccaaccaacctgtagtgtggcggtgacattgtacctgggaagcttcctgtaatcaaatatcgaggtgagttttttgtttgaa |
12022099 |
T |
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| Q |
211 |
atttaatttattggagacacgtatatgaaatgaattggaaa |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
12022098 |
atttaatttattggagacacgtatatgaaatgaattggaaa |
12022058 |
T |
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