View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6417_low_4 (Length: 404)
Name: NF6417_low_4
Description: NF6417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6417_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 12 - 363
Target Start/End: Complemental strand, 12022069 - 12021721
Alignment:
| Q |
12 |
atgaattggaaatacggcatcccgagggcctaacgaagtaataataattacttcgtcggtttttctcaaaattatttgtcactttacagtatcgaaaaag |
111 |
Q |
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| T |
12022069 |
atgaattggaaatacggcatcccgagggcctaacgaagtaataataattacttcgtcggtttgtctcaaaattatttgtcactttacagtatcgaaaaag |
12021970 |
T |
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| Q |
112 |
tattaattatgtttttctaacaaggccgttatttgtaagtaaatcaataactttattattggtacctcgacttttggatcctccgtagtttctgcactat |
211 |
Q |
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| T |
12021969 |
tattaattatgtttttctaacaaggccgtta-ttgtaagtaaatcaataactttattattggtacctcgacttttggatcctccgttgtttctgcacta- |
12021872 |
T |
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| Q |
212 |
actacaactcacagtggagcctgaatttaagtt-aaaaaattctcattttgatccaatggctttgcaacaggctgcacggtgaagccaccacataggatt |
310 |
Q |
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| T |
12021871 |
--tacaactcacagcggagcctgaatttaagttaaaaaaattctcattttgatccaatggctctgcaacaggctgcacggtgaagccaccacataggatt |
12021774 |
T |
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| Q |
311 |
gaagtacatcctaagttcttctacttaactactttaataacagaatttaattt |
363 |
Q |
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| T |
12021773 |
gaagtacatcctaagttcttctacttaactacttcaataacagaattttattt |
12021721 |
T |
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