View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6419_low_8 (Length: 227)
Name: NF6419_low_8
Description: NF6419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6419_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 1138994 - 1139183
Alignment:
| Q |
10 |
gaagaaaatgagaaagtgctggaggagaaaaggaaagccctgaatgttaagactgatggaggaagaaaggtggataccaaggagtttgaatccttgaagc |
109 |
Q |
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| T |
1138994 |
gaagaatatgagaaagtgctggaggagaaaaggaaagccctgaatgttaagactgatggaggaagaaaggtggataccaaggagtttgaatccttgaagc |
1139093 |
T |
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| Q |
110 |
ctctgtcatgcaagaaagagaatgatgagatctttgccaaactggttagttttttatatccttcttttactcccaatttgcagttccaag |
199 |
Q |
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| T |
1139094 |
ctctgtcatgcaagaaagagaatgacgagatctttgccaaactggttagttttttatatccttcttttactcccaatttgcagttccaag |
1139183 |
T |
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