View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6422_high_6 (Length: 263)
Name: NF6422_high_6
Description: NF6422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6422_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 14991623 - 14991395
Alignment:
| Q |
18 |
tgaacaagcggagaaagtaattttatctctagtttctgaccaacaacctccattgtttaaagaacatcttgcaggtccaaaagctgtcaaataaagaaaa |
117 |
Q |
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| T |
14991623 |
tgaacaagcggagaaagtaattttatctctagtttctgaccaacaacctccattgtttaaagaacatcttgcaggtccaaaagctgtcaaataaagaaaa |
14991524 |
T |
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| Q |
118 |
gaataaacaacatatcagcaacgaggaaaatagcttatcattttgagtagagtaatcaggtagtgactgataataggaagaggtaactttttagaatttt |
217 |
Q |
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| T |
14991523 |
gaataaacaacatatcagcaacgaggaaaatagcttatcattttgagtagagtaatcaggtagtgactgataataggaagaggtaactttttagaatttt |
14991424 |
T |
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| Q |
218 |
gagtagagtaattcagaaggaataccttc |
246 |
Q |
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| T |
14991423 |
gagtagagtaattcagaaggaataccttc |
14991395 |
T |
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