View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6424_high_6 (Length: 229)
Name: NF6424_high_6
Description: NF6424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6424_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 34399239 - 34399441
Alignment:
| Q |
10 |
agcacagacatgttgatacactgggactgccctcttgctctaatggaccaatagatggtgggggtaccctacagttgaactataaggagagaaaccttaa |
109 |
Q |
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| T |
34399239 |
agcacggacatgttgatacactgggactgccctcttgctctaatggaccaatagatggtgggggtaccctacagttgaactataaggagagaaaccttaa |
34399338 |
T |
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| Q |
110 |
taagaaattgatgaacaggtatttttcttttggagcacaagggcaggctttggaagatgcaaacacttgctcaatgtcaaatcacagttctaagtgtttc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34399339 |
taagaaattgatgaacaggtatttttcttttggagcacaagggcaggctttggaagatgcaaacacttgctcaatgtcaaatcacagttctaagtgtttc |
34399438 |
T |
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| Q |
210 |
agt |
212 |
Q |
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| T |
34399439 |
agt |
34399441 |
T |
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