View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6428_low_13 (Length: 243)
Name: NF6428_low_13
Description: NF6428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6428_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 36981231 - 36981016
Alignment:
| Q |
10 |
tcgaagaatatcttctcttactgatcaacaaaacaaatgacaacctttataagttgaccatatatatacaactaaattaactttttctttcaaataataa |
109 |
Q |
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| T |
36981231 |
tcgaacaatatcatctcttactgatcaacaaaacaaacgacaacctttataagttgaccatatatatacaactaaattaattttttctttcaaataataa |
36981132 |
T |
|
| Q |
110 |
gagaggtcatatggctcgtgtattctcatcacaaaaggagaaaggtagaaaacaacaaagaacaaaatataaaaacttacccgttttccaaaagtttcca |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |
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| T |
36981131 |
gagaggtcatatggctcgtgtattctcatcacaaaaggagaaaggtagaaaacaacaaagaacaaaatataaaaacttatccgttttccaaaagtttcta |
36981032 |
T |
|
| Q |
210 |
ttaaagataagcatgg |
225 |
Q |
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|||||||||||||||| |
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| T |
36981031 |
ttaaagataagcatgg |
36981016 |
T |
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