View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6429_high_2 (Length: 706)

Name: NF6429_high_2
Description: NF6429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6429_high_2
NF6429_high_2
[»] chr7 (1 HSPs)
chr7 (18-700)||(30932140-30932822)


Alignment Details
Target: chr7 (Bit Score: 631; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 631; E-Value: 0
Query Start/End: Original strand, 18 - 700
Target Start/End: Original strand, 30932140 - 30932822
Alignment:
Q  18 gtttgtaattaattacaaatcaggtgagctaaatctaatcttgggtgtctttattatttgtgctgggttgctgttactttcgacatttctctgggtacta 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30932140 gtttgtaattaattacaaatcaggtgagctaaatctaatcttgggtgtctttattatttgtgctgggttgctgttacttttgacatttctctgggtacta 30932239  T
Q  118 cacttgaagttgaagcctctcttgatgaagttttggcggcttactggttcctcctactttgcatctaaggcaaaactgtcataattggttacctagttga 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  30932240 cacttgaagttgaagcctctcttgatgaagttttggcggcttactggttcctcctactttgcatctaaggcaaaactgtcataattggttacctagttta 30932339  T
Q  218 agttgaacgtgacactccaacattttcttttagttattttaatttgtgtatatgatatgctcggtgatccaacccatattttacgagaacctgttatagg 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30932340 agttgaacgtgacactccaacattttcttttagttattttaatttgtgtatatgatatgctcggtgatccaacccatattttacgagaacctgttctagg 30932439  T
Q  318 taagggaaaatctgatcctacctgattaaacttgaagtagattggatcacttgctgattttgaatttctaacagttcaacccaatgacatagcattatta 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30932440 taagggaaaatctgatcctacctgattaaacttgaagtagattggatcacttgctgattttgaatttctaacagttcaacccaatgacatatcattatta 30932539  T
Q  418 tttttctccattgtttatatatatttttagtttgagaatgtttgcttgagagtatatcacttgcaattcagatttgcctttgaaatttcactatgtttag 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30932540 tttttctccattgtttatatatatttttagtttgagaatgtttgcttgagagtatatcacttgcaattcagatttgcgtttgaaatttcactatgtttag 30932639  T
Q  518 cgtgttcaagttatgaaagtgttttgatttagttataattttgnnnnnnnngtagaaaatatgcttctcttttaggccacatgaaactatttgaaaaggg 617  Q
    |||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30932640 cgtgttcaagttatgaaagtgttttgatttagttataattttgaaaaaaaagtagaaaatatgcttctcttttaggccacatgaaactatttgaaaaggg 30932739  T
Q  618 gtcaaaaagtatgcaaaatgcactggaaatgtgcttctcttttaagccgacatgaacaatcaagtttccctgctctgtgctgc 700  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30932740 gtcaaaaagtaggcaaaatgcactggaaatgtgcttctcttttaagccgacatgaacaatcaagtttccctgctttgtgctgc 30932822  T

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