View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6429_high_48 (Length: 202)
Name: NF6429_high_48
Description: NF6429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6429_high_48 |
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Alignment Details
Target: chr7 (Bit Score: 137; Significance: 9e-72; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 9e-72
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 3948954 - 3948782
Alignment:
| Q |
17 |
aattccgtatattacaatgctactaccactcccattaccacatattctcattgatttttagtataaaggcaccactcccattaccacaacccttcattcc |
116 |
Q |
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| T |
3948954 |
aattccgtatattacaatgctactaccactcccattaccacatattctcattgatttttagtataaaggcaccactcccattaccacaaccc-tcattcc |
3948856 |
T |
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| Q |
117 |
aaaaccatccaattgagaatacattcttc----tttttgttcactttatttcaaactcataaccatgtcttctg |
186 |
Q |
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| T |
3948855 |
ataaccatccaattcagaatacattcttcttctttttggttcactttatttcaaactcataaccatgtcttctg |
3948782 |
T |
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