View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6429_high_7 (Length: 515)
Name: NF6429_high_7
Description: NF6429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6429_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 429; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 18 - 504
Target Start/End: Original strand, 29038026 - 29038524
Alignment:
| Q |
18 |
tacataacctgatatagacactaatcagaccaaacttaatgtatatataggttttgaccaagaagaaaaattgctttatgatcacacagaagtaaacaca |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29038026 |
tacataacctgatatagacactaatcagaccaaacttaatgtctatataggttttgaccaagaagaaaaattgctttatgatcacacagaagtaaacaca |
29038125 |
T |
|
| Q |
118 |
aacaa---------gatatgata---gtgtctaattgcataaaattccaaatacattcccatatactagtaattttttaacaaacaacatatgacatagc |
205 |
Q |
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||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |
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| T |
29038126 |
aacaatcaaaacaagatatgatattagtgtctaattgcataaaattccaaatacattcacatatactagtaattgtttaacaaacaacatatgacatagc |
29038225 |
T |
|
| Q |
206 |
tagtagcataactggattcaattgacaacaaaatcaccatcattattacacaaaacaaaattcaaagggacaaattttcaatttctcctattggtaaatt |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
29038226 |
tagtagcataactggattcaattgacaacaaaatcaccatcattattacacaaaacaaaattcaaagggacaacttttcaatttctcctattggtaaatt |
29038325 |
T |
|
| Q |
306 |
cagctccattatttctccatcagtcaccaagtcccttcctttatgcacattgtgagtcctagaatttattgaagaaagaaatgagcaacaattgaagttc |
405 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
29038326 |
cagctccattatttctccatcagtcaccaagtcccttcctttatgcacattgtgaatcccagaatttattgaagaaagaaatgagcaacaattgaagttc |
29038425 |
T |
|
| Q |
406 |
atacctggatatgaatatttgcaaattgatcccaaatttcctgtattgaagttataagcaacaacagctcctggaagctgcaaatatatgatctgtgct |
504 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29038426 |
atacctggatatgaatatttgcaaattgatcccaaatttcctgtattgaagttataagcaacaacagctcctggaagctgcaaatatatgatctgtgct |
29038524 |
T |
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