View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6429_low_29 (Length: 277)

Name: NF6429_low_29
Description: NF6429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6429_low_29
NF6429_low_29
[»] chr6 (45 HSPs)
chr6 (1-262)||(8320756-8321018)
chr6 (3-258)||(9402458-9402713)
chr6 (39-251)||(13768948-13769160)
chr6 (42-258)||(20348934-20349149)
chr6 (1-126)||(29199846-29199972)
chr6 (10-119)||(32959868-32959978)
chr6 (13-121)||(24602829-24602938)
chr6 (45-260)||(34346011-34346235)
chr6 (39-121)||(28079696-28079778)
chr6 (1-134)||(14410817-14410950)
chr6 (110-258)||(1947862-1948010)
chr6 (39-121)||(5863383-5863465)
chr6 (33-118)||(14506095-14506180)
chr6 (59-251)||(10925463-10925655)
chr6 (39-121)||(27738778-27738860)
chr6 (39-121)||(32853850-32853932)
chr6 (42-215)||(256495-256669)
chr6 (39-121)||(2367332-2367414)
chr6 (33-138)||(7393881-7393986)
chr6 (40-121)||(12141391-12141472)
chr6 (39-124)||(20610982-20611067)
chr6 (166-247)||(29341131-29341212)
chr6 (45-118)||(32532549-32532622)
chr6 (160-220)||(34179130-34179190)
chr6 (45-121)||(3483929-3484005)
chr6 (33-100)||(11988049-11988116)
chr6 (42-121)||(18908899-18908978)
chr6 (39-121)||(10142518-10142600)
chr6 (39-121)||(12309578-12309660)
chr6 (39-116)||(21875649-21875727)
chr6 (39-121)||(24225704-24225786)
chr6 (39-121)||(27534690-27534772)
chr6 (39-121)||(32053094-32053176)
chr6 (39-97)||(34178329-34178387)
chr6 (39-96)||(30986284-30986341)
chr6 (131-251)||(14321744-14321863)
chr6 (50-121)||(9458669-9458740)
chr6 (42-121)||(12678097-12678176)
chr6 (159-198)||(32054391-32054430)
chr6 (160-258)||(2126742-2126840)
chr6 (39-85)||(10188080-10188126)
chr6 (47-121)||(11762451-11762525)
chr6 (39-97)||(19367039-19367097)
chr6 (39-116)||(9442441-9442518)
chr6 (45-121)||(15498330-15498406)
[»] chr1 (53 HSPs)
chr1 (1-247)||(39219139-39219386)
chr1 (33-197)||(48125677-48125841)
chr1 (48-251)||(42728953-42729156)
chr1 (40-258)||(36421636-36421854)
chr1 (39-117)||(16408953-16409031)
chr1 (32-258)||(8880318-8880544)
chr1 (31-238)||(47644852-47645058)
chr1 (42-194)||(33293534-33293675)
chr1 (63-251)||(41476976-41477164)
chr1 (48-118)||(10778576-10778646)
chr1 (160-258)||(13692514-13692612)
chr1 (39-121)||(34673282-34673364)
chr1 (33-118)||(3627979-3628064)
chr1 (39-128)||(17134947-17135036)
chr1 (39-121)||(29936423-29936505)
chr1 (39-121)||(36187220-36187302)
chr1 (49-258)||(25154837-25155046)
chr1 (45-121)||(10450065-10450141)
chr1 (39-119)||(23490771-23490851)
chr1 (33-143)||(49741008-49741111)
chr1 (49-144)||(9982900-9982995)
chr1 (160-258)||(16903391-16903483)
chr1 (39-118)||(19572512-19572591)
chr1 (160-251)||(43513150-43513241)
chr1 (42-121)||(44615478-44615557)
chr1 (42-121)||(44793012-44793091)
chr1 (43-121)||(16237308-16237386)
chr1 (39-121)||(23058473-23058555)
chr1 (39-121)||(28297941-28298023)
chr1 (42-128)||(34085235-34085321)
chr1 (39-121)||(49250773-49250855)
chr1 (39-121)||(51421865-51421947)
chr1 (39-120)||(5181047-5181128)
chr1 (39-128)||(18354080-18354169)
chr1 (42-118)||(35069892-35069968)
chr1 (39-118)||(24236761-24236840)
chr1 (37-120)||(34060023-34060106)
chr1 (39-121)||(12495017-12495099)
chr1 (33-87)||(16433161-16433215)
chr1 (42-144)||(29871288-29871390)
chr1 (160-221)||(23719510-23719571)
chr1 (39-120)||(50426661-50426742)
chr1 (42-74)||(2514811-2514843)
chr1 (45-97)||(24710878-24710930)
chr1 (45-97)||(39616323-39616375)
chr1 (39-114)||(19003666-19003741)
chr1 (39-86)||(23968621-23968668)
chr1 (47-90)||(44632149-44632192)
chr1 (185-238)||(5290448-5290501)
chr1 (42-155)||(13798211-13798324)
chr1 (160-196)||(2581505-2581541)
chr1 (42-114)||(35936832-35936904)
chr1 (48-96)||(42707846-42707894)
[»] chr8 (41 HSPs)
chr8 (42-258)||(8545352-8545568)
chr8 (41-251)||(28345367-28345577)
chr8 (42-249)||(29918485-29918692)
chr8 (33-251)||(5700232-5700450)
chr8 (21-118)||(9642333-9642430)
chr8 (3-121)||(17469261-17469380)
chr8 (43-231)||(12468223-12468410)
chr8 (43-147)||(14687379-14687483)
chr8 (160-246)||(36274924-36275009)
chr8 (39-144)||(20399575-20399680)
chr8 (42-248)||(27777201-27777408)
chr8 (39-251)||(6388516-6388717)
chr8 (53-214)||(9476027-9476188)
chr8 (43-258)||(17084111-17084328)
chr8 (39-120)||(15068588-15068668)
chr8 (39-118)||(27932422-27932501)
chr8 (33-208)||(30903965-30904139)
chr8 (160-238)||(5793474-5793552)
chr8 (39-121)||(32303067-32303149)
chr8 (44-121)||(43113631-43113708)
chr8 (42-126)||(40789590-40789674)
chr8 (42-121)||(37960965-37961044)
chr8 (42-143)||(1012603-1012703)
chr8 (43-119)||(10297466-10297542)
chr8 (1-115)||(14507188-14507303)
chr8 (33-144)||(14186303-14186414)
chr8 (39-121)||(1063513-1063595)
chr8 (39-121)||(24927955-24928037)
chr8 (39-121)||(29108822-29108904)
chr8 (39-121)||(34777072-34777154)
chr8 (39-121)||(39445576-39445658)
chr8 (39-117)||(45236075-45236153)
chr8 (39-128)||(27056555-27056644)
chr8 (33-142)||(36131911-36132020)
chr8 (48-121)||(40248380-40248453)
chr8 (39-87)||(5858652-5858700)
chr8 (48-119)||(24870033-24870104)
chr8 (160-231)||(17108270-17108343)
chr8 (48-146)||(34021457-34021555)
chr8 (42-155)||(14155504-14155617)
chr8 (42-86)||(15173883-15173927)
[»] chr4 (74 HSPs)
chr4 (60-258)||(42907762-42907959)
chr4 (42-247)||(21956818-21957022)
chr4 (49-258)||(8843816-8844024)
chr4 (49-258)||(8856780-8856988)
chr4 (42-249)||(25941022-25941229)
chr4 (58-251)||(9929187-9929380)
chr4 (63-258)||(33516097-33516293)
chr4 (42-258)||(36918999-36919214)
chr4 (32-199)||(25298827-25298993)
chr4 (42-258)||(12075635-12075851)
chr4 (132-256)||(17113097-17113220)
chr4 (133-258)||(21714070-21714195)
chr4 (160-249)||(39086040-39086129)
chr4 (39-143)||(1724311-1724415)
chr4 (21-121)||(29527824-29527924)
chr4 (130-258)||(33616207-33616335)
chr4 (39-126)||(14605926-14606013)
chr4 (39-121)||(47103750-47103832)
chr4 (42-147)||(19883060-19883165)
chr4 (39-258)||(35304517-35304736)
chr4 (132-258)||(25265241-25265366)
chr4 (1-121)||(30266292-30266413)
chr4 (1-121)||(30285775-30285896)
chr4 (48-121)||(47550363-47550436)
chr4 (166-258)||(7334311-7334403)
chr4 (33-121)||(31782625-31782713)
chr4 (45-121)||(48459493-48459569)
chr4 (42-215)||(4741220-4741392)
chr4 (39-121)||(5902615-5902697)
chr4 (39-121)||(6382273-6382355)
chr4 (39-121)||(6482036-6482118)
chr4 (39-121)||(7608982-7609064)
chr4 (39-121)||(11028085-11028167)
chr4 (33-87)||(12825456-12825510)
chr4 (109-258)||(37926436-37926583)
chr4 (39-121)||(44317547-44317629)
chr4 (33-86)||(11173020-11173073)
chr4 (43-244)||(36306674-36306875)
chr4 (31-223)||(16575022-16575214)
chr4 (33-121)||(21544591-21544679)
chr4 (33-97)||(32596179-32596243)
chr4 (104-258)||(9280955-9281109)
chr4 (39-121)||(15987263-15987345)
chr4 (140-258)||(30034549-30034667)
chr4 (45-126)||(1866556-1866637)
chr4 (39-120)||(3737789-3737870)
chr4 (50-143)||(26564821-26564914)
chr4 (42-111)||(37107433-37107501)
chr4 (33-121)||(10574414-10574502)
chr4 (41-121)||(45065261-45065341)
chr4 (39-118)||(11122870-11122949)
chr4 (39-118)||(21423876-21423955)
chr4 (1-66)||(568472-568538)
chr4 (39-121)||(10302096-10302178)
chr4 (39-121)||(31752468-31752550)
chr4 (39-121)||(39046964-39047046)
chr4 (42-108)||(39375303-39375369)
chr4 (42-96)||(41915000-41915054)
chr4 (42-96)||(43309520-43309574)
chr4 (58-220)||(43553354-43553521)
chr4 (1-126)||(23927604-23927729)
chr4 (33-74)||(24637240-24637281)
chr4 (42-115)||(31415935-31416008)
chr4 (46-86)||(19548945-19548985)
chr4 (45-121)||(31918565-31918641)
chr4 (49-121)||(32585501-32585573)
chr4 (45-117)||(55826630-55826702)
chr4 (50-121)||(43893240-43893311)
chr4 (160-226)||(12505652-12505718)
chr4 (44-130)||(50684470-50684556)
chr4 (168-213)||(55783424-55783469)
chr4 (168-213)||(55847606-55847651)
chr4 (42-74)||(12505545-12505577)
chr4 (160-224)||(37384183-37384246)
[»] scaffold0244 (1 HSPs)
scaffold0244 (47-256)||(4589-4797)
[»] chr5 (43 HSPs)
chr5 (42-251)||(40187661-40187869)
chr5 (15-260)||(17153036-17153281)
chr5 (58-258)||(29664840-29665040)
chr5 (33-121)||(38006464-38006552)
chr5 (42-251)||(38972798-38973007)
chr5 (48-224)||(8020518-8020694)
chr5 (41-251)||(27900404-27900612)
chr5 (39-121)||(4920832-4920914)
chr5 (160-258)||(35583986-35584084)
chr5 (31-204)||(6810081-6810254)
chr5 (58-225)||(16311313-16311479)
chr5 (42-121)||(28569025-28569104)
chr5 (39-121)||(12834575-12834657)
chr5 (31-204)||(12457440-12457613)
chr5 (1-121)||(12712519-12712640)
chr5 (46-258)||(18451893-18452105)
chr5 (33-120)||(10822521-10822608)
chr5 (39-121)||(4583125-4583207)
chr5 (166-238)||(12770647-12770719)
chr5 (39-119)||(23044992-23045072)
chr5 (39-258)||(24207559-24207772)
chr5 (42-121)||(2681222-2681301)
chr5 (1-118)||(12773783-12773901)
chr5 (39-121)||(12866552-12866634)
chr5 (39-121)||(20973497-20973579)
chr5 (41-155)||(32574941-32575055)
chr5 (79-251)||(7350448-7350620)
chr5 (166-238)||(12709397-12709469)
chr5 (45-121)||(15890213-15890288)
chr5 (45-121)||(17853300-17853375)
chr5 (39-118)||(40517815-40517894)
chr5 (42-121)||(6155924-6156001)
chr5 (58-118)||(35311831-35311891)
chr5 (39-85)||(10127116-10127162)
chr5 (3-121)||(12447387-12447505)
chr5 (39-121)||(29245952-29246034)
chr5 (39-97)||(33728002-33728060)
chr5 (40-121)||(42987481-42987562)
chr5 (130-198)||(457464-457532)
chr5 (33-97)||(2985177-2985241)
chr5 (13-89)||(8453350-8453424)
chr5 (160-251)||(16366570-16366662)
chr5 (1-96)||(34259286-34259382)
[»] chr2 (44 HSPs)
chr2 (40-251)||(35248386-35248593)
chr2 (58-258)||(30696794-30696994)
chr2 (38-257)||(25210248-25210467)
chr2 (138-258)||(13954615-13954735)
chr2 (138-258)||(14095822-14095942)
chr2 (3-143)||(6027852-6027993)
chr2 (39-121)||(15546751-15546833)
chr2 (160-258)||(34214778-34214875)
chr2 (3-251)||(35965211-35965460)
chr2 (160-251)||(31600889-31600980)
chr2 (47-121)||(24414140-24414214)
chr2 (39-120)||(37106700-37106781)
chr2 (72-231)||(11958912-11959071)
chr2 (39-121)||(9632393-9632475)
chr2 (39-121)||(22900801-22900883)
chr2 (39-121)||(30846953-30847035)
chr2 (39-121)||(38342519-38342601)
chr2 (39-124)||(6164473-6164558)
chr2 (43-251)||(34544314-34544523)
chr2 (166-224)||(40734710-40734768)
chr2 (61-118)||(8915959-8916016)
chr2 (39-120)||(24051624-24051705)
chr2 (161-262)||(35409274-35409375)
chr2 (160-204)||(13531873-13531917)
chr2 (39-119)||(13705361-13705441)
chr2 (33-121)||(18485655-18485743)
chr2 (41-121)||(43371560-43371640)
chr2 (39-118)||(10208430-10208509)
chr2 (39-86)||(34458833-34458880)
chr2 (43-117)||(3547177-3547251)
chr2 (39-121)||(7314648-7314730)
chr2 (39-121)||(14331534-14331616)
chr2 (33-79)||(35409161-35409207)
chr2 (39-121)||(37999490-37999572)
chr2 (48-117)||(45115569-45115638)
chr2 (67-155)||(4961479-4961567)
chr2 (180-251)||(29656876-29656948)
chr2 (49-120)||(37472769-37472840)
chr2 (140-215)||(40359257-40359332)
chr2 (39-121)||(4427931-4428013)
chr2 (42-87)||(10212447-10212492)
chr2 (42-111)||(35510446-35510515)
chr2 (42-121)||(30978934-30979011)
chr2 (42-121)||(44057889-44057969)
[»] chr7 (58 HSPs)
chr7 (39-256)||(3156959-3157176)
chr7 (33-121)||(3920549-3920637)
chr7 (13-250)||(23475236-23475475)
chr7 (39-121)||(18683985-18684067)
chr7 (33-119)||(26004468-26004554)
chr7 (40-204)||(4101470-4101634)
chr7 (42-130)||(10995837-10995925)
chr7 (39-118)||(3226946-3227025)
chr7 (58-251)||(37217885-37218079)
chr7 (39-121)||(18825872-18825954)
chr7 (138-251)||(11472811-11472924)
chr7 (33-251)||(23533598-23533817)
chr7 (160-260)||(31345398-31345498)
chr7 (3-240)||(19439973-19440212)
chr7 (33-144)||(26622939-26623050)
chr7 (39-121)||(10072477-10072559)
chr7 (39-121)||(30650642-30650724)
chr7 (39-144)||(27850326-27850431)
chr7 (39-258)||(29292566-29292797)
chr7 (39-143)||(2630574-2630677)
chr7 (39-258)||(3773943-3774162)
chr7 (42-121)||(5377096-5377175)
chr7 (39-121)||(12980388-12980470)
chr7 (39-121)||(16866180-16866262)
chr7 (39-121)||(32546203-32546285)
chr7 (1-121)||(28309503-28309624)
chr7 (39-128)||(45380111-45380200)
chr7 (167-251)||(6557854-6557938)
chr7 (39-107)||(10990861-10990929)
chr7 (41-121)||(31426019-31426099)
chr7 (39-119)||(45885765-45885845)
chr7 (45-120)||(21702671-21702746)
chr7 (39-118)||(41103670-41103749)
chr7 (42-144)||(16079001-16079103)
chr7 (39-121)||(17885476-17885558)
chr7 (39-121)||(22973399-22973481)
chr7 (39-121)||(35074481-35074563)
chr7 (42-96)||(42908044-42908098)
chr7 (30-82)||(5432007-5432059)
chr7 (45-113)||(39456021-39456089)
chr7 (43-118)||(33841092-33841167)
chr7 (39-86)||(38139792-38139839)
chr7 (33-224)||(43550411-43550600)
chr7 (39-118)||(44845135-44845214)
chr7 (39-121)||(7780019-7780101)
chr7 (39-121)||(25905640-25905721)
chr7 (39-121)||(27896475-27896557)
chr7 (31-84)||(42005952-42006005)
chr7 (33-121)||(16811741-16811828)
chr7 (45-121)||(18125234-18125310)
chr7 (39-119)||(38152900-38152980)
chr7 (45-128)||(43507449-43507532)
chr7 (39-121)||(43218294-43218376)
chr7 (45-119)||(45708871-45708945)
chr7 (47-120)||(27063346-27063419)
chr7 (33-97)||(24425415-24425479)
chr7 (58-118)||(44734376-44734436)
chr7 (3-47)||(45380204-45380248)
[»] scaffold0036 (1 HSPs)
scaffold0036 (39-143)||(33377-33481)
[»] chr3 (42 HSPs)
chr3 (42-251)||(27252443-27252649)
chr3 (58-212)||(30904835-30904988)
chr3 (130-258)||(37032189-37032315)
chr3 (39-143)||(4016044-4016148)
chr3 (33-97)||(49025710-49025774)
chr3 (42-121)||(42758380-42758459)
chr3 (39-121)||(30616281-30616363)
chr3 (39-121)||(39655273-39655355)
chr3 (39-128)||(23546942-23547031)
chr3 (39-130)||(44639271-44639362)
chr3 (39-121)||(4557305-4557387)
chr3 (39-121)||(44172632-44172714)
chr3 (39-121)||(44179332-44179414)
chr3 (39-121)||(44252753-44252835)
chr3 (39-121)||(48390817-48390899)
chr3 (15-91)||(1337076-1337152)
chr3 (39-130)||(52198152-52198243)
chr3 (39-121)||(34025960-34026042)
chr3 (39-128)||(22535841-22535930)
chr3 (39-128)||(53631903-53631992)
chr3 (39-118)||(7469778-7469857)
chr3 (39-118)||(17146150-17146229)
chr3 (42-121)||(34119662-34119741)
chr3 (47-118)||(44106800-44106871)
chr3 (39-118)||(44953435-44953514)
chr3 (39-130)||(48305641-48305732)
chr3 (39-118)||(49580073-49580152)
chr3 (42-184)||(4553134-4553275)
chr3 (39-121)||(10043282-10043364)
chr3 (39-121)||(23580833-23580915)
chr3 (39-121)||(29284342-29284424)
chr3 (39-121)||(34154420-34154502)
chr3 (168-249)||(34593034-34593113)
chr3 (169-215)||(38347524-38347570)
chr3 (160-250)||(26207164-26207250)
chr3 (130-199)||(27937667-27937736)
chr3 (70-143)||(31126826-31126899)
chr3 (42-121)||(54317150-54317229)
chr3 (166-220)||(9220333-9220387)
chr3 (58-119)||(3385875-3385936)
chr3 (45-118)||(29842317-29842389)
chr3 (42-155)||(42243359-42243472)
[»] scaffold0005 (1 HSPs)
scaffold0005 (39-126)||(211365-211452)
[»] scaffold0022 (1 HSPs)
scaffold0022 (39-144)||(90580-90685)
[»] scaffold0184 (1 HSPs)
scaffold0184 (42-118)||(2978-3054)
[»] scaffold0198 (1 HSPs)
scaffold0198 (31-154)||(20731-20854)
[»] scaffold0013 (2 HSPs)
scaffold0013 (42-121)||(128124-128203)
scaffold0013 (68-121)||(105498-105551)
[»] scaffold0015 (1 HSPs)
scaffold0015 (43-121)||(55902-55979)
[»] scaffold1322 (1 HSPs)
scaffold1322 (131-251)||(987-1107)
[»] scaffold0157 (2 HSPs)
scaffold0157 (160-226)||(14759-14825)
scaffold0157 (42-74)||(14900-14932)


Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 8320756 - 8321018
Alignment:
Q  1 caaaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagat 99  Q
    |||||||| | ||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  8320756 caaaccaatcttaatttgacggattttccccgctttgactaggtttgggttttccccaatttcaaaacacgggtacggaacaggtaacagggatatagat 8320855  T
Q  100 atcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactc 199  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||     
T  8320856 atcgaccccgaacccatacccagacccgttctgaatgcaaaaaatcaacttattactccatttacgtaaatagaaacttaaaccctaaatcatttcactt 8320955  T
Q  200 ccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttcttcgt 262  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8320956 acacagtcagagtctcggtctttcagacgacattcacttatcatagttatctattttcttcgt 8321018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 258
Target Start/End: Complemental strand, 9402713 - 9402458
Alignment:
Q  3 aaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatat 101  Q
    |||||| || ||||||| || ||||||  ||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||||| |||||||| | |    
T  9402713 aaccaaacccaatttgatggattttccccgctttgactggatttgggttttccccgatttcaaaacatgggtacaggacgggtaacatggatataggtgt 9402614  T
Q  102 cgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactccc 201  Q
    | |||| |||||||||| || ||  ||   ||||| |||||||||| ||| |||  ||||||| ||||||||||| |||||||||||||||||||||| |    
T  9402613 ccaccc-gaacccatactcaaacctgtctcgaatgtagaaaatcaatttagtaccccatttatataaatagaaacccaaaccctaaatcatttcactcac 9402515  T
Q  202 acagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||||||||||||| ||||||||| |  ||| ||||||||||||||||||| ||||||    
T  9402514 acagtcagagtctaggtctttcatatcacactcacttatcatagttctctcttttct 9402458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 251
Target Start/End: Complemental strand, 13769160 - 13768948
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    ||||||| |||||||||| | ||||||||| ||||| |||||||||||| |  |||||| || | |||| ||||||||| ||| || ||| ||||||| |    
T  13769160 tgggtttcggttttccccgacttcaaaacatgggtatgggacgggtaacggacatataggtacccacccagaacccatatccaaacccgtcctgaatgta 13769061  T
Q  139 gaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactt 238  Q
    ||||||||| |||||||| | ||||| ||||| |||||||||||| ||||| |||||| |  |||||||||| ||||  ||| ||| | |||| ||||||    
T  13769060 gaaaatcaatttattactccttttatataaattgaaactcaaaccataaattatttcagtaacacagtcagattctccatctctcatatgacactcactt 13768961  T
Q  239 atcatagttctct 251  Q
     ||| ||||||||    
T  13768960 ctcagagttctct 13768948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 42 - 258
Target Start/End: Complemental strand, 20349149 - 20348934
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    |||||| |||||||| ||||||||||||||||| |||||| ||||| ||||||||| || | ||||||||| |||||||| |  ||||   |||| | ||    
T  20349149 gtttggattttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaatccgttgcaaatgtaaaa 20349050  T
Q  142 aatcaacttattactgcatttatgtaaa-tagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttat 240  Q
    ||| || |||||||    ||||| |||| || ||||||||||||||||||| ||||||| |||  ||||||||| || |||||||| |||| | ||||||    
T  20349049 aattaatttattacactttttatataaaatataaactcaaaccctaaatcacttcactcacac--tcagagtcttggactttcagatgacacttacttat 20348952  T
Q  241 catagttctctattttct 258  Q
    ||||||||||| ||||||    
T  20348951 catagttctctcttttct 20348934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 29199846 - 29199972
Alignment:
Q  1 caaaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagat 99  Q
    |||||||||||  ||||||||| ||||||  | ||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||  |    
T  29199846 caaaccaaccccgatttgacggattttccccgatttgattgggtttggattttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgt 29199945  T
Q  100 atcgaccccgaacccatacccagactc 126  Q
    ||| |||||||||||||||||| ||||    
T  29199946 atctaccccgaacccatacccaaactc 29199972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 32959978 - 32959868
Alignment:
Q  10 cctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgacccc 108  Q
    ||||||||||||| ||||||  | ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||| |||||    
T  32959978 cctaatttgacggattttcctcgttttgattgggtttgggttttccctaatttcaaaacacgggtacggaacgggtaacggggatataggtatccacccc 32959879  T
Q  109 gaacccatacc 119  Q
    |||||||||||    
T  32959878 gaacccatacc 32959868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 24602829 - 24602938
Alignment:
Q  13 aatttgacggtttt-ccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaa 111  Q
    |||||||||||||| || || |||||||||||||||||||||||  ||||||||||| ||||| | ||||||||||||| ||||||||| | ||||||||    
T  24602829 aatttgacggtttttccctgttttgactgggtttgggttttcccagatttcaaaacatgggtatgtgacgggtaacaggtatatagatacccaccccgaa 24602928  T
Q  112 cccataccca 121  Q
    ||||||||||    
T  24602929 cccataccca 24602938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 260
Target Start/End: Original strand, 34346011 - 34346235
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaat 144  Q
    |||||||| ||| |||| |||| |||||| |||  || ||||| ||||||||| || | |||||||| | ||||||| |  ||||| ||||| |||||||    
T  34346011 tgggtttttcccgattttaaaatacgggttcggagcgagtaacggggatataggtacccaccccgaatctatacccaaatccgttccgaatgtagaaaat 34346110  T
Q  145 caacttattactgcatttatgtaaa---------tagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattca 235  Q
     || |||||||| | ||||| ||||         ||||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||| || | |||    
T  34346111 taatttattactccttttatataaattatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctcagtcttttagatgagagtca 34346210  T
Q  236 cttatcatagttctctattttcttc 260  Q
    |||||||||||||| | ||||||||    
T  34346211 cttatcatagttctatcttttcttc 34346235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 28079696 - 28079778
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| || | ||||||||||||||||||    
T  28079696 tgggtttgggttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtacccaccccgaacccataccca 28079778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 14410817 - 14410950
Alignment:
Q  1 caaaccaaccctaatttgacggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagata 100  Q
    ||||||||  |||||||||||| ||| |  | ||||||| |||||| ||||||||  ||||||||||||||||| |||||||||||| || |||||| ||    
T  14410817 caaaccaaatctaatttgacggattttcccgttttgactaggtttgagttttcccagatttcaaaacacgggtatgggacgggtaacgggtatataggta 14410916  T
Q  101 tcgaccccgaacccatacccagactcgttctgaa 134  Q
     | |||||||||||||||||| || ||| |||||    
T  14410917 cccaccccgaacccatacccaaacccgtcctgaa 14410950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 1947862 - 1948010
Alignment:
Q  110 aacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcag 209  Q
    ||||||||| || ||||||||  |||| |||||||||| |||||||  | ||||| |||||| |||  |||||||||| |||||  |||| |||||||||    
T  1947862 aacccatactcaaactcgttccaaatgtagaaaatcaatttattaccccttttatataaataaaaatccaaaccctaagtcattatactcacacagtcag 1947961  T
Q  210 agtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||| || | |||||||| |||| |||||||||||||||| || ||||||    
T  1947962 agtatctgactttcagatgacactcacttatcatagttccctcttttct 1948010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 5863383 - 5863465
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||| || ||||||||| | ||| ||||||||||||||    
T  5863383 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccataccca 5863465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 14506180 - 14506095
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||| | || ||| || | |||||||||||||||    
T  14506180 tttgactgggtttgggttttccccgatttcaaaacacaggtatgggacgggtaacaagtatttaggtacccaccccgaacccatac 14506095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 251
Target Start/End: Original strand, 10925463 - 10925655
Alignment:
Q  59 tttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgc 158  Q
    |||||||||| ||||||| || ||||||  | ||||||  |||| |||||||||||||||| | |||| ||| ||||| | ||||  || |||||| | |    
T  10925463 tttcaaaacatgggtacgagatgggtaatggagatataagtatccaccccgaacccatacctaaactcattccgaatgtaaaaaaataatttattattcc 10925562  T
Q  159 atttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
     ||||| ||||||||| || ||||||||||||||||||||  |||| ||| ||| |  |||||||| |||||| |||||| ||  ||||||||    
T  10925563 ttttatataaatagaatctgaaaccctaaatcatttcactaacacaatcaaagttttagtctttcaaacgacactcacttctctaagttctct 10925655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 27738860 - 27738778
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||||  |||||  || | ||||||||||||||||||    
T  27738860 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacagatatatatgtacccaccccgaacccataccca 27738778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 32853932 - 32853850
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  32853932 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 32853850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 256495 - 256669
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| ||||||||| ||||||||||| ||||||| |||||||||  || |||||| || | ||||| |||||||||||| || | | || |||| ||||    
T  256495 gtttgagttttccccgatttcaaaacatgggtacgagacgggtaatgggcatataggtacccaccccaaacccatacccaaacccctcctaaatgtagaa 256594  T
Q  142 aatcaacttattactgcatttatgt-aaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctc 215  Q
    |||||| ||| |||  | ||||| | |||||||||| ||||| |||||| | |||  || || ||||||||||||    
T  256595 aatcaatttactaccccttttatttaaaatagaaacacaaactctaaattaattctttcacatagtcagagtctc 256669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 2367414 - 2367332
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||  || | ||||||||||||||||||    
T  2367414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccataccca 2367332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 7393881 - 7393986
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||| | ||||| |||  || |||||| |||| ||||||||||||||| || |||| | |||    
T  7393881 tttgattgggtttggattttccccgatttcaaaacacgagtaagagacggataatgggtatataggtatccaccccgaacccatactcaaactcatcctg 7393980  T
Q  133 aatgca 138  Q
    ||||||    
T  7393981 aatgca 7393986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 12141472 - 12141391
Alignment:
Q  40 gggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||| ||||||||||||||| ||||||||||| || ||||||||| || || |||||| || | ||||||||||||||||||    
T  12141472 gggtatgggttttccccaatctcaaaacacggatatgggacgggtgacgggtatataggtacccaccccgaacccataccca 12141391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 20610982 - 20611067
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagac 124  Q
    |||||||||| ||||||| ||||||||| ||||||| |||||||||||| || |||||  |||| |||||||| | ||||||||||    
T  20610982 tgggtttggggtttccccgatttcaaaatacgggtaggggacgggtaacgggaatatatgtatccaccccgaaactatacccagac 20611067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 29341212 - 29341131
Alignment:
Q  166 taaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagtt 247  Q
    ||||||||||| ||||||||| |||||||||||   ||||||||| ||||  ||||||||| |||| |||||||||||||||    
T  29341212 taaatagaaacccaaaccctatatcatttcacttatacagtcagattctcaatctttcagatgacaatcacttatcatagtt 29341131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 32532622 - 32532549
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    |||||||||||| ||||||||||||||||| |||||||||||  || |||||| || | |||||||||||||||    
T  32532622 tgggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatac 32532549  T

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Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 34179130 - 34179190
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtct 220  Q
    ||||| ||||||||||||||||||||||||||||| | || ||| ||||||||||||||||    
T  34179130 tttatataaatagaaactcaaaccctaaatcattttattcgcacggtcagagtctcggtct 34179190  T

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Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 3483929 - 3484005
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||| || || ||||||||||| |||| ||||||| || |||||| || | ||||||||||||||||||    
T  3483929 tgggttttccccgatctcgaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccataccca 3484005  T

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Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 11988049 - 11988116
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagata 100  Q
    ||||||||||||| | |||||||||||||||||  |||||| |||| ||| ||| |||||||||||||    
T  11988049 tttgactgggttttgattttccccaatttcaaagtacgggtgcggggcggataatagggatatagata 11988116  T

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Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 18908978 - 18908899
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||| ||||||||| |||| || ||||||||||||| |||||||  || | ||||| ||| ||||||||    
T  18908978 gtttgggttttccccgatttcaaaatacggatatgggacgggtaacaaggatatatgtacccaccccaaactcataccca 18908899  T

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Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 10142518 - 10142600
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||| ||||||| ||||| |||||| || |||||| || | ||||||||| ||||||||    
T  10142518 tgggtatgggttttccccgatctcaaaaaacgggtatgggacaggtaacgggtatataggtacccaccccgaactcataccca 10142600  T

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Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 12309660 - 12309578
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||||| |||||  ||||||||||||||||| || |||||||||||| |||||  || | |||||||||| |||||||    
T  12309660 tgggtatgggtattccctgatttcaaaacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgataccca 12309578  T

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Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 21875649 - 21875727
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgacccc-gaacccat 116  Q
    |||||||| |||||| ||||||| | |||||||||||||||||| ||||| ||| ||||||| | ||||| ||||||||    
T  21875649 tgggtttgagttttctccaattttataacacgggtacgggacggataacatggagatagatacccacccctgaacccat 21875727  T

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Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 24225786 - 24225704
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||| |||||||| || ||||||||||| || |||||||||||| || |||||| || | ||||||||||||| ||||    
T  24225786 tgggtatggattttccccgatctcaaaacacggatatgggacgggtaacgggtatataggtacccaccccgaacccatgccca 24225704  T

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Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 27534772 - 27534690
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || ||||||||| || || ||||||||||| |||||||||||| || |||||| || | |||||||| |||||||||    
T  27534772 tgggtatgagttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaatccataccca 27534690  T

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Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 32053176 - 32053094
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| ||||||||||| || || |||||||||||| || |||||  || | ||||| ||||||||||||    
T  32053176 tgggtatgggttttccccgatttcaaaacatggatatgggacgggtaacgggtatatatgtacccaccccaaacccataccca 32053094  T

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Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 34178329 - 34178387
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    ||||| ||||||| |||  ||||||||||||||||||| ||||||||||| ||||||||    
T  34178329 tgggtatgggtttcccctgatttcaaaacacgggtacgagacgggtaacaaggatatag 34178387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 30986341 - 30986284
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatata 96  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||    
T  30986341 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatata 30986284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 14321863 - 14321744
Alignment:
Q  131 tgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgac 230  Q
    |||||| ||||||| || |||||||    ||||| |||||||||||||||| | ||||||||||||||| |   | || ||||||| ||||| ||| |||    
T  14321863 tgaatgtagaaaattaatttattacctattttatataaatagaaactcaaatcttaaatcatttcactcac-gtgacaaagtctcgttctttaagatgac 14321765  T
Q  231 attcacttatcatagttctct 251  Q
    | |||||||||||| ||||||    
T  14321764 aatcacttatcataattctct 14321744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 9458740 - 9458669
Alignment:
Q  50 tttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||||| ||||||||||||| | |||| ||||||||  || | ||| ||||| ||||||||    
T  9458740 tttccccaatttcaaaatacgggtacgggacagataacggggatatatgtacccacctcgaactcataccca 9458669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 12678097 - 12678176
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||||||||| ||||||| |||| |||| |||||||||||  || |||||| || | |||| |||||||||||||    
T  12678097 gtttgcgttttccccgatttcaagacacaggtatgggacgggtaaagggtatataggtacccaccctgaacccataccca 12678176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 32054391 - 32054430
Alignment:
Q  159 atttatgtaaatagaaactcaaaccctaaatcatttcact 198  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  32054391 atttatataaatagaagctcaaaccctaaatcatttcact 32054430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 2126742 - 2126840
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||||| || |||||||||||| |  ||||||||||||||  || ||| | ||||||||| ||| |||  ||| ||| ||||||||||||||| ||||||    
T  2126742 tttatatagatagaaactcaagctttaaatcatttcacttacagagttaaagtctcggtattttagatcacactcagttatcatagttctctcttttct 2126840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 10188080 - 10188126
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggta 85  Q
    ||||| |||||||||||| || |||||||||||||| ||||||||||    
T  10188080 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggta 10188126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 11762525 - 11762451
Alignment:
Q  47 ggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||| ||| ||||| ||||| ||||| |||||||||||| || |||||| | || ||||||||| ||||||||    
T  11762525 ggtttttcccgatttctaaacaagggtatgggacgggtaacgggtatataggtgtccaccccgaactcataccca 11762451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 19367097 - 19367039
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    ||||| ||| ||||||||||||| |||||||||||| | ||||||||||| | ||||||    
T  19367097 tgggtatggattttccccaattttaaaacacgggtatgagacgggtaacatgaatatag 19367039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 9442518 - 9442441
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccat 116  Q
    ||||| |||| ||| ||| ||||||||||||||||| |||||||||||| || ||| || || | || ||||||||||    
T  9442518 tgggtatgggattttcccgatttcaaaacacgggtatgggacgggtaacgggtatagaggtacccactccgaacccat 9442441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 15498406 - 15498330
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||| ||||||||||||||||| | ||| |||||  || |||||| || | | |||||||||| |||||    
T  15498406 tgggttttccccgatttcaaaacacgggtatgagacaggtaatgggtatataggtacccatcccgaacccacaccca 15498330  T

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Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 39219386 - 39219139
Alignment:
Q  1 caaaccaaccctaatttgacggttttccgt-gctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagat 99  Q
    |||||||| || |||||||||| ||||| | ||||| |  ||||||||||||||||| |||| ||||||||||||||| ||  ||||| |||||| |  |    
T  39219386 caaaccaatcccaatttgacgggtttccttcgcttttatcgggtttgggttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgt 39219287  T
Q  100 atcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactc 199  Q
    | | |||||||||||||||||| ||||||||| |||| ||||||| || |||||||  | ||||| |||||||||||||||||||||||||||||| |||    
T  39219286 acccaccccgaacccatacccaaactcgttctaaatgtagaaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcgctc 39219187  T
Q  200 ccacagtcagagtctcggtctttcagacgacattcacttatcatagtt 247  Q
     |||||||| ||||||  | ||||| | |||| |||||||||||||||    
T  39219186 acacagtcacagtctcattttttcatatgacactcacttatcatagtt 39219139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 197
Target Start/End: Original strand, 48125677 - 48125841
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    |||||||| |||||| |||| ||  |||| |||||||||||||||||||||||||  |||||||| |||| |||||||||||||||||| ||||||   |    
T  48125677 tttgactgagtttggatttttcctgattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaactcgtcgcg 48125776  T
Q  133 aatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcac 197  Q
    |||| |||||||||| ||| ||| || ||||| ||||||||||||||||| |||||| |||||||    
T  48125777 aatgtagaaaatcaatttactaccgcttttatataaatagaaactcaaactctaaattatttcac 48125841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 251
Target Start/End: Original strand, 42728953 - 42729156
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaa 147  Q
    ||||| ||| ||||||||||| ||||||  |||| || |  ||||||| | || | ||||||||| |||||||| || ||||||||||| ||||||| ||    
T  42728953 gtttttcccgatttcaaaacatgggtacaagacgagtgatggggatatgggtaactaccccgaactcatacccaaacacgttctgaatgtagaaaataaa 42729052  T
Q  148 cttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagtt 247  Q
     |||| |   | ||||| |||||||||||| | || |||||||||||||||| ||||||||||||||| ||||||||||  |||  ||||||||||||||    
T  42729053 tttatcatcccttttatataaatagaaacttatacactaaatcatttcactcacacagtcagagtctcagtctttcagataacacccacttatcatagtt 42729152  T
Q  248 ctct 251  Q
    ||||    
T  42729153 ctct 42729156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 258
Target Start/End: Complemental strand, 36421854 - 36421636
Alignment:
Q  40 gggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcag 139  Q
    |||| ||||||||| ||||||  |||| ||||||||||||   |||| |||||||||| ||   |||||||||  ||||||| ||||||   ||||  ||    
T  36421854 gggtatgggttttctccaattataaaatacgggtacgggataagtaatagggatataggtactcaccccgaacttatacccaaactcgtctcgaatatag 36421755  T
Q  140 aaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactta 239  Q
    |||||||| ||||||   |  |||| |||||| |||||| ||| ||||||||||||| || |||||||||||||||  ||||||||| | || |||||||    
T  36421754 aaaatcaatttattatccctcttatataaataaaaactcgaactctaaatcatttcattcacacagtcagagtctcaatctttcagatggcaatcactta 36421655  T
Q  240 tcatagttctctattttct 258  Q
    |||||||||||| ||||||    
T  36421654 tcatagttctctcttttct 36421636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 16409031 - 16408953
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccata 117  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||||||||||||||    
T  16409031 tgggtatgggttttccccaatttcaaaacacgggtatgggacgggtaacaggtatataggtaccgaccccgaacccata 16408953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 258
Target Start/End: Complemental strand, 8880544 - 8880318
Alignment:
Q  32 ctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttct 131  Q
    |||||||| |||||||||||||  | |||| |||||||| |||| |||| |||||  |||||| || |||| |||| | ||||||||||| || ||| |     
T  8880544 ctttgacttggtttgggttttcttcgatttaaaaacacgagtacaggacaggtaatggggataaaggtatccaccctggacccatacccaaacccgtccc 8880445  T
Q  132 gaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgaca 231  Q
     |||||  ||||| || |||||||  | ||| | |||||||||||||||||  ||||||||||||||| || ||| |||||| | |||||||||  ||||    
T  8880444 aaatgctaaaaataaatttattaccccttttttataaatagaaactcaaactttaaatcatttcactcacaaagttagagtcgcagtctttcagttgaca 8880345  T
Q  232 ttcacttatcatagttctctattttct 258  Q
     | | |||||||| |||||| ||||||    
T  8880344 cttatttatcataattctctcttttct 8880318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 238
Target Start/End: Original strand, 47644852 - 47645058
Alignment:
Q  31 gctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    ||||||| | |||||||||||||||| || ||||||||| |||||||||||| |||  |||||| |  || | ||||||||| |||| ||| |||||| |    
T  47644852 gctttgattaggtttgggttttccccgatctcaaaacacaggtacgggacggataat-gggatagaagtacctaccccgaactcatatccatactcgtcc 47644950  T
Q  131 tgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgac 230  Q
     ||||| | || |  || ||||||   | ||||| |||||||||||||| | |||||||||||||||||||||  ||| |||| | || | |||||||||    
T  47644951 cgaatgtaaaataataatttattatcccttttatataaatagaaactcagatcctaaatcatttcactcccacgatcatagtcgcagtttgtcagacgac 47645050  T
Q  231 attcactt 238  Q
    ||||||||    
T  47645051 attcactt 47645058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 33293534 - 33293675
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||  |||||||||           ||||||||||||| |||||||| ||||| ||||    
T  33293534 gtttgggtttttcccgatttcaaaacacgggtatgggacgggtaatggggatatag-----------gaacccatacccaaactcgttccgaatgtagaa 33293622  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcattt 194  Q
    |||||| ||| |||    ||||| | |||||||||||||||||||||||||||    
T  33293623 aatcaatttagtacccattttatatcaatagaaactcaaaccctaaatcattt 33293675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 251
Target Start/End: Original strand, 41476976 - 41477164
Alignment:
Q  63 aaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcattt 162  Q
    |||| ||| ||||||||||| ||||  |||||||  || | |||||||| ||||||||| || ||| | ||| |||||||||||| || ||||    |||    
T  41476976 aaaatacgagtacgggacggataacgtggatatatgtacccaccccgaatccatacccaaacccgtcccgaaagcagaaaatcaatttgttacccttttt 41477075  T
Q  163 atgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
    || |||| |||||   ||||||||||| |||||| || |||||||| |||||| |||||||||| ||||  ||||||||||| ||||||    
T  41477076 atataaagagaaatggaaaccctaaattatttcattcacacagtcaaagtctccgtctttcagatgacacccacttatcataattctct 41477164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 10778576 - 10778646
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| ||| ||||||||||||||||| |||||||||||| ||| |||||||||| |||||||||||||||    
T  10778576 gtttttcccgatttcaaaacacgggtatgggacgggtaacggggttatagatatccaccccgaacccatac 10778646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 13692612 - 13692514
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||||| |||||||||||  ||||||||||||||||||| | |||| | |||||||   |||||||||||||| |||||||| |||||||||| ||||||    
T  13692612 tttatataaatagaaaccaaaaccctaaatcatttcacccacacaattagagtcttactctttcagacgacactcacttattatagttctctcttttct 13692514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 34673282 - 34673364
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||| ||||||||||||||||||||| | ||| |||||| || |||||| || | ||||||||||||||||||    
T  34673282 tgggtttgggtttttcccaatttcaaaacacgggtatgagactggtaacgggtatataggtacccaccccgaacccataccca 34673364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 3627979 - 3628064
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||||||||| | |||||||||| ||||||||||||||||| |||||||||||| || || ||| || | |||||||||||||||    
T  3627979 tttgactgggtataggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccatac 3628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 17135036 - 17134947
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    ||||| |||||||||||| ||||||||||||||||| | |||||||||| || |||||| || |  ||||||||||||||||| ||||||    
T  17135036 tgggtatgggttttccccgatttcaaaacacgggtatgagacgggtaacgggtatataggtaccatccccgaacccatacccatactcgt 17134947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 29936505 - 29936423
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||| ||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  29936505 tgggtatgggttttccccgatctcaaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 29936423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 36187220 - 36187302
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||| || | |||| |||||||||||||    
T  36187220 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaacccataccca 36187302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 258
Target Start/End: Original strand, 25154837 - 25155046
Alignment:
Q  49 ttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaac 148  Q
    |||| ||| ||||||||||||| |||||||||| ||||  ||||||||  || | ||  ||||| ||| |||| || ||| ||||||  ||||||||||     
T  25154837 tttttcccgatttcaaaacacgagtacgggacgagtaatggggatataagtacccacttcgaactcatgcccaaacccgtcctgaatttagaaaatcaat 25154936  T
Q  149 ttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttc 248  Q
    | | |||  | |||||  |||  ||||  |||||| ||||| ||||||||  ||| || |||||||||||| || ||| |||| ||||||||||||||||    
T  25154937 tcactaccccttttattcaaagggaaatccaaaccttaaattatttcactatcactgtgagagtctcggtcatttagatgacactcacttatcatagttc 25155036  T
Q  249 tctattttct 258  Q
    ||| ||||||    
T  25155037 tcttttttct 25155046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 10450065 - 10450141
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||| |||||||||||| |||| ||||||||||| |||||||||||||||||  || | ||||||||| ||||||||    
T  10450065 tgggctttccccaattttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcataccca 10450141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 23490771 - 23490851
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    ||||| |||||||||||| || || ||||||||||| |||||||||||| || |||||| || | ||||||||||||||||    
T  23490771 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacc 23490851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 49741008 - 49741111
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    ||||||||||||| |||||||||||||||||||||| || || |||||||||       |||||| || | |||||||||||||||||| || ||| | |    
T  49741008 tttgactgggtttaggttttccccaatttcaaaacatggatatgggacgggt-------atataggtacccaccccgaacccatacccaaacccgtcccg 49741100  T
Q  133 aatgcagaaaa 143  Q
    |||||||||||    
T  49741101 aatgcagaaaa 49741111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 9982900 - 9982995
Alignment:
Q  49 ttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaat 144  Q
    |||||||||||||||||||||||| | |||| |||||||  | |||||| || | |||||||||||||||||| || | | | |||||||||||||    
T  9982900 ttttccccaatttcaaaacacgggaatgggatgggtaacgagtatataggtacccaccccgaacccatacccaaacccatcccgaatgcagaaaat 9982995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 16903483 - 16903391
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||||| |||||| ||||||||||||||||| ||||||||| |||| ||||||| || |||||      |||| ||||||||||||||||||| ||||||    
T  16903483 tttatataaatataaactcaaaccctaaattatttcactcacacaatcagagtttcagtctt------gacaatcacttatcatagttctctcttttct 16903391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 19572512 - 19572591
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||| ||| ||||||||||||||||| ||||| |||||| || |||||| || | |||||||||||||||    
T  19572512 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatac 19572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 43513150 - 43513241
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
    ||||| |||||||||||||||||||||||| |||||||||  ||| ||||||| ||||| | ||||| ||||  ||||| ||||| ||||||    
T  43513150 tttatataaatagaaactcaaaccctaaataatttcactcgtacaatcagagtttcggtgtgtcagaggacacccacttctcatatttctct 43513241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 44615478 - 44615557
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||  |||| |||||||||||| ||||||||||||||| |||||| || | ||||| ||| ||||||||    
T  44615478 gtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcataccca 44615557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 44793091 - 44793012
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||  |||| |||||||||||| ||||||||||||||| |||||| || | ||||| ||| ||||||||    
T  44793091 gtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcataccca 44793012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 16237308 - 16237386
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||  |||||||  ||   ||||||||||||||||||    
T  16237308 tttgggttttccccgatttcaaaatacgggtaagggacgggtaacgaggatatatgtactaaccccgaacccataccca 16237386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 23058555 - 23058473
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||| |||||| || |||||||||  || ||||| |||||||||| ||||||||| || | ||||||||||||||||||    
T  23058555 tgggtttgagttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccaccccgaacccataccca 23058473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 28298023 - 28297941
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || ||||||||| || || ||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  28298023 tgggtatgagttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 28297941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 34085321 - 34085235
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    ||||||||||| ||| ||||||||||||| ||| |||| ||||||| ||| ||||  || | |||||||||||||||||| ||||||    
T  34085321 gtttgggtttttcccgatttcaaaacacgagtatgggatgggtaacggggttatatgtacccaccccgaacccatacccatactcgt 34085235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 49250773 - 49250855
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || ||||||||| || |||||||||||||| |||||||||||  || |||||| |||| ||| ||||||||||||||    
T  49250773 tgggtatgagttttccccgatctcaaaacacgggtatgggacgggtaatgggtatataggtatccacctcgaacccataccca 49250855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 51421947 - 51421865
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||| ||| || |||||||||||||| ||||||||||||| | |||||  || | ||||||||||||||||||    
T  51421947 tgggtatgggtttttcccgatctcaaaacacgggtatgggacgggtaacatgtatatatgtacccaccccgaacccataccca 51421865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 5181128 - 5181047
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    ||||| |||||||||||| ||||||||| ||||||| |||||||||||| || ||||||  | | ||||| |||||||||||    
T  5181128 tgggtatgggttttccccgatttcaaaatacgggtatgggacgggtaacgggtatataggcacccaccccaaacccataccc 5181047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 18354080 - 18354169
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    ||||| |||||||||||| ||||||||||| ||||| |||||||||||| || |||||  |  | |||||||||| ||||||| ||||||    
T  18354080 tgggtatgggttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataagttcccaccccgaaccgatacccatactcgt 18354169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 35069892 - 35069968
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| ||||||||| |||||| || ||||||||  |||||||||||||||||||  || | |||||||||||||||    
T  35069892 gtttgagttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccatac 35069968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 24236761 - 24236840
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||||||| || |||||||||||||| || ||||| ||| || |||||| || | |||||||||||||||    
T  24236761 tgggtatgggttttccccgatctcaaaacacgggtatggaacggggaacgggtatataggtacccaccccgaacccatac 24236840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 34060023 - 34060106
Alignment:
Q  37 actgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    ||||||| || ||||||| | ||||||||||||||||| | ||||| ||||||| |||||| || | || ||||||||||||||    
T  34060023 actgggtatgagttttcctcgatttcaaaacacgggtatgagacggataacaggtatataggtacccactccgaacccataccc 34060106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 12495099 - 12495017
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||| |||||| ||| |||||||||||||| || |||||| ||||| || |||||| || | ||| ||||||||||||||    
T  12495099 tgggttttggtttttcccgatttcaaaacacggatatgggacgtgtaacgggtatataggtacccacctcgaacccataccca 12495017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 16433161 - 16433215
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaac 87  Q
    ||||| |||||||| |||||| || ||||||||||||||||| ||||||||||||    
T  16433161 tttgattgggtttgagttttctccgatttcaaaacacgggtatgggacgggtaac 16433215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 29871288 - 29871390
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    |||||||||||| || ||||||||||| ||||| ||||| |||||| || |||||| || | |||| |||| |||||||| || ||| | ||||| ||||    
T  29871288 gtttgggttttctccgatttcaaaacatgggtatgggacaggtaactggtatataggtacccaccctgaactcatacccaaacccgtcccgaatgtagaa 29871387  T
Q  142 aat 144  Q
    |||    
T  29871388 aat 29871390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 23719571 - 23719510
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctt 221  Q
    ||||| |||||||||||||||||  ||||||||||||||  ||||||| ||||||| |||||    
T  23719571 tttatataaatagaaactcaaactataaatcatttcactaacacagtctgagtctcagtctt 23719510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 50426661 - 50426742
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    ||||| |||| ||||||  ||||||||||||||||| | ||||| |||| || |||||| || | |||||||||||||||||    
T  50426661 tgggtatgggctttccctgatttcaaaacacgggtatgagacggataacgggtatataggtacccaccccgaacccataccc 50426742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 2514843 - 2514811
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggta 74  Q
    |||||||||||||||||||||||||||||||||    
T  2514843 gtttgggttttccccaatttcaaaacacgggta 2514811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 24710930 - 24710878
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    |||||||||||| || |||||||||||||| |||||||||||| || ||||||    
T  24710930 tgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatatag 24710878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 39616375 - 39616323
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    |||||||||||| |||||||||||||||||  |||||||||||| | ||||||    
T  39616375 tgggttttcccctatttcaaaacacgggtataggacgggtaacaagtatatag 39616323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 19003666 - 19003741
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaaccc 114  Q
    |||||| ||||||||||| ||| ||||| ||||||| ||||||| |||| ||||||||  |||| ||||| |||||    
T  19003666 tgggttcgggttttccccgattacaaaatacgggtatgggacggataacggggatatatgtatccaccccaaaccc 19003741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 23968668 - 23968621
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaa 86  Q
    ||||| ||||||||||||  |||||||||||||||| |||||||||||    
T  23968668 tgggtatgggttttccccggtttcaaaacacgggtatgggacgggtaa 23968621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 44632149 - 44632192
Alignment:
Q  47 ggttttccccaatttcaaaacacgggtacgggacgggtaacagg 90  Q
    ||||||| || ||||||||||||||||| |||||||||||||||    
T  44632149 ggttttctccgatttcaaaacacgggtatgggacgggtaacagg 44632192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 5290448 - 5290501
Alignment:
Q  185 taaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactt 238  Q
    |||||||||| |||| || ||||| |||||| |||||||||||||| |||||||    
T  5290448 taaatcatttaactcacatagtcaaagtctcagtctttcagacgacgttcactt 5290501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 13798324 - 13798211
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||||||||| ||| ||||||||||||||||| | || |||||||  |||||||  |||| ||||| ||  |||||| | || | | || |||| ||||    
T  13798324 gtttgggtttttcccgatttcaaaacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacctaaacccatcctaaatgtagaa 13798225  T
Q  142 aatcaacttattac 155  Q
    |||||| |||||||    
T  13798224 aatcaatttattac 13798211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 2581541 - 2581505
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttca 196  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  2581541 tttatataaatagaaactcaaactctaaatcatttca 2581505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 35936832 - 35936904
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaaccc 114  Q
    ||||||||||||||| |||||||| |||| ||| ||||||| |||| || |||||| || | ||||| |||||    
T  35936832 gtttgggttttccccgatttcaaatcacgagtatgggacggataacgggtatataggtacccaccccaaaccc 35936904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 42707846 - 42707894
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatata 96  Q
    |||||| || ||||||||||||||||| |||||||||||| || |||||    
T  42707846 gttttctccgatttcaaaacacgggtatgggacgggtaacgggaatata 42707894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 258
Target Start/End: Original strand, 8545352 - 8545568
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    |||||||||||| || ||||||||||||||||| || ||| ||||| |||||||||||| | ||||||||||||||| || |||||| |  |||| ||||    
T  8545352 gtttgggttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaactcgtcccaaatgtagaa 8545451  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    |||||| |||  ||| | ||||| |||| |||||  ||||||||||||||||||||||  | || |||||||||||||||||| | |||| |||||||||    
T  8545452 aatcaatttacaactccttttatataaacagaaatccaaaccctaaatcatttcactcaaatagccagagtctcggtctttcaaatgacactcacttatc 8545551  T
Q  242 atagttctctattttct 258  Q
    ||| |||||| ||||||    
T  8545552 ataattctctcttttct 8545568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 41 - 251
Target Start/End: Complemental strand, 28345577 - 28345367
Alignment:
Q  41 ggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcaga 140  Q
    ||||||| |||| ||| ||| |||||||||||||| ||| |||||||  ||||||||  | | |||||||||||||||||| ||| || ||||||| |||    
T  28345577 ggtttggattttacccgattccaaaacacgggtacaggatgggtaacgaggatataggcacccaccccgaacccatacccaaacttgtcctgaatgtaga 28345478  T
Q  141 aaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttat 240  Q
    |||| ||  ||||||  | ||||| |||||||||||  |||  |||||||||||||||| |||||||| |||||| || ||||||| |||| ||||||||    
T  28345477 aaataaatatattaccccttttatataaatagaaaccgaaattctaaatcatttcactcacacagtcatagtctcagtatttcagatgacactcacttat 28345378  T
Q  241 catagttctct 251  Q
    |||||||||||    
T  28345377 catagttctct 28345367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 249
Target Start/End: Complemental strand, 29918692 - 29918485
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| ||||| ||| ||||||||||||  |||| | ||||||||||  ||||||  || | |||||||| |||||| || || ||| |  |||| | ||    
T  29918692 gtttgagtttttcccgatttcaaaacacatgtacagaacgggtaacaaagatatatgtacccaccccgaaaccatacacaaacccgtcccaaatgtaaaa 29918593  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    |||||| |||||||  | ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||| |||| | | |||||    
T  29918592 aatcaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcactcacacagttagagtctcaatctttcagatgacacttagttatc 29918493  T
Q  242 atagttct 249  Q
    ||||||||    
T  29918492 atagttct 29918485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 33 - 251
Target Start/End: Complemental strand, 5700450 - 5700232
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    |||||||||||||  ||||| ||| |||||||||||| |||| | ||| |||||| |||||||||||| | ||| |||||||||||||| |  | | | |    
T  5700450 tttgactgggtttaagtttttcccgatttcaaaacacaggtatgagactggtaacggggatatagatacccacctcgaacccatacccaaatccatcccg 5700351  T
Q  133 aatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacat 232  Q
    |||| | ||||| || || ||||  | ||||| ||||| |||||  |||| ||||||||||||||||||| |||||||||||  |||||| ||| ||||     
T  5700350 aatgtataaaattaattttttaccccttttatataaattgaaaccgaaactctaaatcatttcactcccatagtcagagtcttagtcttttagatgacag 5700251  T
Q  233 tcacttatcatagttctct 251  Q
    |||||||||||| ||||||    
T  5700250 tcacttatcataattctct 5700232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 9642333 - 9642430
Alignment:
Q  21 ggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| |||| ||||| | |||||||||||||    
T  9642333 ggttttccccgctttgactgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacggggttatatatatccatcccgaacccatac 9642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 17469380 - 17469261
Alignment:
Q  3 aaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatat 101  Q
    |||||| || |||||||||| ||||||  | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||| ||     
T  17469380 aaccaaacccaatttgacggattttccccgttttgactgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtac 17469281  T
Q  102 cgaccccgaacccataccca 121  Q
    | ||||| ||||||||||||    
T  17469280 ccaccccaaacccataccca 17469261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 231
Target Start/End: Original strand, 12468223 - 12468410
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaa 142  Q
    |||||||||||| | ||||| ||||||||||||| |||  ||||  ||||| ||| || | ||||||||| ||||| || | |||||| ||||| |||||    
T  12468223 tttgggttttcctcgatttcgaaacacgggtacgagacatgtaat-gggatgtaggtaccaaccccgaactcatactcaaattcgttccgaatgtagaaa 12468321  T
Q  143 atcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgaca 231  Q
    |||||||||||||    ||||| |||| |||||| |||| ||||||| |||||||||  || |||||||||||||||| ||| ||||||    
T  12468322 atcaacttattaccctttttatataaagagaaacgcaaatcctaaattatttcactcatactgtcagagtctcggtctatcaaacgaca 12468410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 147
Target Start/End: Complemental strand, 14687483 - 14687379
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaa 142  Q
    |||||||||||||| |||||||||||| |||| |||||| | ||||||||||||  |||| |||||||||||||||||| |||||| |||||||  ||||    
T  14687483 tttgggttttccccgatttcaaaacacaggtatgggacgagaaacagggatatatgtatccaccccgaacccatacccaaactcgtcctgaatgtggaaa 14687384  T
Q  143 atcaa 147  Q
    |||||    
T  14687383 atcaa 14687379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 36275009 - 36274924
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagt 246  Q
    ||||| ||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||    
T  36275009 tttatataaatagaaacccaa-ccctaaatcatttcactcacacagtcaaagtctcggtctttcagatgacactcacttatcatagt 36274924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 20399680 - 20399575
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||| || ||||||||| | ||||||||||||| |||| || ||| | |||||||    
T  20399680 tgggtttgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccaccccgaacccattcccaaacccgtcccgaatgca 20399581  T
Q  139 gaaaat 144  Q
     |||||    
T  20399580 aaaaat 20399575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 248
Target Start/End: Original strand, 27777201 - 27777408
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| ||||| ||| |||||||||||| |||||||||| |||||||| |||| || || | |||||||||||||||||| ||||| |||  ||  | ||    
T  27777201 gtttgagtttttcccgatttcaaaacacaggtacgggacaggtaacagagatacaggtacccaccccgaacccatacccaaactcgctctacatatataa 27777300  T
Q  142 aatcaacttattactgc-atttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttat 240  Q
    |||||| |||||||  |  ||| | ||||||||||   |||| ||||||||||| |||   |||||| |||| || || ||||||| |||| ||||||||    
T  27777301 aatcaatttattacccctttttgtataaatagaaatctaaactctaaatcattttacttaaacagtctgagtttcagtatttcagatgacactcacttat 27777400  T
Q  241 catagttc 248  Q
    ||||||||    
T  27777401 catagttc 27777408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 251
Target Start/End: Original strand, 6388516 - 6388717
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    ||||||||||| |||||| |||| |||||||||||||  |||||||||| ||||||||| ||           ||||| | || || | | ||||||| |    
T  6388516 tgggtttgggtcttccccgattttaaaacacgggtacaagacgggtaacggggatataggta-----------cccatgctcaaacccatcctgaatgta 6388604  T
Q  139 gaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactt 238  Q
    ||||||||| |||||||    ||||| |||| |||||| |||||||||||||||||||||| |||| | |||||||| | |||| | | |||| ||||||    
T  6388605 gaaaatcaatttattacccattttatataaacagaaacccaaaccctaaatcatttcactcacacaattagagtctcagactttaaaatgacactcactt 6388704  T
Q  239 atcatagttctct 251  Q
    |||||||||||||    
T  6388705 atcatagttctct 6388717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 9476027 - 9476188
Alignment:
Q  53 ccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttat 152  Q
    |||| ||||||||| |||| ||||||||  ||||| |||||||| ||| | ||| |||||||||||||| || | | | ||||| ||||||| || ||||    
T  9476027 ccccgatttcaaaaaacggatacgggacaagtaacggggatataaatacccacctcgaacccatacccaaacccatcccgaatgtagaaaattaaattat 9476126  T
Q  153 tactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtct 214  Q
    |||  | | ||| |||||||||| | |||| |||||| ||||||||| ||||||||||||||    
T  9476127 taccccttatatataaatagaaattgaaactctaaattatttcactcacacagtcagagtct 9476188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 43 - 258
Target Start/End: Original strand, 17084111 - 17084328
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatg--caga 140  Q
    ||||||||||| || |||| |||||||||||||| |||||||||| |||||||||||| | ||||||||| |||| ||| || | |   |||||   | |    
T  17084111 tttgggttttctccgattttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatccaaacccatcacgaatgtaaaaa 17084210  T
Q  141 aaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttat 240  Q
    ||||||| |||||      ||||| |||||| |||| ||| |||||||| ||| | ||| |||| ||||||| || |||||||| | |||| ||||||||    
T  17084211 aaatcaatttattgtcctttttatataaatataaacccaagccctaaattattcccctcacacaatcagagtttcagtctttcatatgacaatcacttat 17084310  T
Q  241 catagttctctattttct 258  Q
    ||||||| ||| ||||||    
T  17084311 catagttatctcttttct 17084328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 15068588 - 15068668
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    |||||| ||||||||||| ||||||||| ||||||||||||| |||||| ||||||||  |||| |||||||||||||||||    
T  15068588 tgggttcgggttttccccgatttcaaaatacgggtacgggacaggtaac-gggatatatgtatccaccccgaacccataccc 15068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 27932501 - 27932422
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||||||| ||||||||||||||||| |||||| ||||| || |||||| || | |||||||||||||||    
T  27932501 tgggtatgggttttccccgatttcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatac 27932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 30904139 - 30903965
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    ||||| || |||||||||| || | ||||||||||||||||||| |||||||||  | ||||||  || | |||||  ||||||||||| |   || | |    
T  30904139 tttgaatgagtttgggttt-cctcgatttcaaaacacgggtacgagacgggtaatggagatataagtacccaccccatacccatacccaaatcagtcccg 30904041  T
Q  133 aatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtca 208  Q
    |||| |||||||||| |||||||    ||||| |||||||||||  ||||| ||||||||||||||| ||||||||    
T  30904040 aatgtagaaaatcaatttattacacattttatataaatagaaaccaaaaccttaaatcatttcactcacacagtca 30903965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 5793552 - 5793474
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactt 238  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||  || |||||  ||||||| ||||||| ||||||    
T  5793552 tttatataaatagaaactcaaaccctaaatcatttcactcacacaaccaaagtctaagtctttctgacgacactcactt 5793474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 32303149 - 32303067
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || || ||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  32303149 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 32303067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 43113631 - 43113708
Alignment:
Q  44 ttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||| ||| ||||||||||||||| | ||||||||||||||| |||||| || | ||||||||| ||||||||    
T  43113631 ttgggtttttcccgatttcaaaacacgggcatgggacgggtaacaggtatataggtacccaccccgaactcataccca 43113708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 40789674 - 40789590
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactc 126  Q
    |||||||||||||||||||||| || |  ||||| ||||||||||||||||||||  || | |||||||||| ||||||| ||||    
T  40789674 gtttgggttttccccaatttcataatataggtactggacgggtaacagggatatatgtacccaccccgaacctatacccaaactc 40789590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 37960965 - 37961044
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||| |||| |||||||||||| ||||| ||||||||| |||||| ||   ||||||||| ||||||||    
T  37960965 gtttgggttttccccgatttaaaaacacgggtatgggacaggtaacaggtatataggtacacaccccgaactcataccca 37961044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 1012703 - 1012603
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||||||||||||| |||| |||||| | ||| |||||||||||  || |||||| || | |||||||||||||||||| |||||| | ||||||| ||    
T  1012703 gtttgggttttccccgattt-aaaacatgagtatgggacgggtaatgggtatataggtacccaccccgaacccatacccaaactcgtcccgaatgcaaaa 1012605  T
Q  142 aa 143  Q
    ||    
T  1012604 aa 1012603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 10297542 - 10297466
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||| ||||||||  || | |||| |||||||||||    
T  10297542 tttgggttttccccgatttcaaaatacggggacgggacaggtaacggggatatatgtacctaccctgaacccatacc 10297466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14507188 - 14507303
Alignment:
Q  1 caaaccaaccctaatttgacgg---ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    ||||||||||||||||||||||   |||||||   |||||||| ||||||||||||| |||||  |||| | ||||| |||||||||||  | ||||||     
T  14507188 caaaccaaccctaatttgacgggttttttccga--tttgactgagtttgggttttcctcaattataaaatatgggtatgggacgggtaaaggtgatatat 14507285  T
Q  98 atatcgaccccgaaccca 115  Q
     |||| ||||||||||||    
T  14507286 gtatccaccccgaaccca 14507303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 14186414 - 14186303
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    ||||| |||||||| ||||| | | ||||||||||||||||| |||| ||||||| |  |||||| ||   |||| ||||||||||||| || ||| |||    
T  14186414 tttgattgggtttgagtttttctcgatttcaaaacacgggtatgggatgggtaacggatatataggtactcaccctgaacccatacccaaacccgtcctg 14186315  T
Q  133 aatgcagaaaat 144  Q
    |||| |||||||    
T  14186314 aatgtagaaaat 14186303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 1063595 - 1063513
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||| ||| ||||||||||||||||| ||||||| |||| || |||||  || | ||||||||| ||||||||    
T  1063595 tgggtatgggtttttcccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaactcataccca 1063513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 24928037 - 24927955
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||  || || ||||||||||| | |||||||||| || |||||| || | ||||||||||||||||||    
T  24928037 tgggtatgggttttccctgatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccgaacccataccca 24927955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 29108822 - 29108904
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||| ||| |||| |||||| ||||| |||||||||||| || |||||  || | ||||||||||||||||||    
T  29108822 tgggtatgggtttttcccgattttaaaacatgggtatgggacgggtaacgggtatatatgtacccaccccgaacccataccca 29108904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 34777154 - 34777072
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||| ||| || |||||||||||||| || ||| |||||||| || ||| || | ||||||||||||||||||    
T  34777154 tgggtatgggtttttcccgatctcaaaacacgggtatggaacgagtaacaggtatttaggtacccaccccgaacccataccca 34777072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 39445576 - 39445658
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||| ||| ||||||||||||||||| ||||| |||||| ||  ||||| || | ||||||||| ||||||||    
T  39445576 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtttataggtacccaccccgaactcataccca 39445658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 45236153 - 45236075
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccata 117  Q
    ||||| || ||||||||  ||||||||||||||||| |||||||||||  || |||||| || | ||||||||||||||    
T  45236153 tgggtatgagttttccctgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccata 45236075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 27056555 - 27056644
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    |||||||||||||| ||| ||||||||  || |||| |||||||||||| ||| ||||  || | ||||||||||||||| || ||||||    
T  27056555 tgggtttgggtttttcccgatttcaaagtacaggtatgggacgggtaacggggttatatctacccaccccgaacccatacacatactcgt 27056644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 36131911 - 36132020
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    ||||| |||||||| ||||||||| ||||||||||||| ||| |||| ||||||  || ||| || |||| ||||||||| ||||| || |  ||| | |    
T  36131911 tttgattgggtttgagttttcccctatttcaaaacacgagtatgggatgggtaaagggcatacaggtatccaccccgaactcatacacaaatccgtcccg 36132010  T
Q  133 aatgcagaaa 142  Q
    ||||||||||    
T  36132011 aatgcagaaa 36132020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 40248380 - 40248453
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||| ||||||||||||||||| | ||||| |||| || |||||| || | | ||||||||||||||||    
T  40248380 gttttccccgatttcaaaacacgggtatgagacggataacgggtatataggtacccatcccgaacccataccca 40248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 5858652 - 5858700
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaac 87  Q
    |||||||||||||| ||| |||| |||||||||||| ||||||||||||    
T  5858652 tgggtttgggtttttcccgatttaaaaacacgggtatgggacgggtaac 5858700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 24870033 - 24870104
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    ||||||||| |||| |||||||||||| | |||||||||| || |||||| || | ||||||| ||||||||    
T  24870033 gttttccccgattttaaaacacgggtatgtgacgggtaacgggtatataggtacccaccccgagcccatacc 24870104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 17108343 - 17108270
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtc--agagtctcggtctttcagacgaca 231  Q
    ||||| |||||||||||| ||||||||||| ||||||||| |||| ||  || |||||||| ||||| ||||||    
T  17108343 tttatataaatagaaacttaaaccctaaataatttcactcacacaatcaaagtgtctcggtatttcaaacgaca 17108270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 34021555 - 34021457
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatca 146  Q
    ||||||| | |||| |||| |||| || || ||| |||||||| |||||| ||   ||||| |||| |||| ||||||||| |||||||||||||||||    
T  34021555 gttttccacgattttaaaatacggatatggaacgagtaacaggaatataggtacacaccccaaaccaatacacagactcgtcctgaatgcagaaaatca 34021457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 14155617 - 14155504
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||||||||| ||| |||||||||||||||||   || |||||||  |||||||  |||| ||||| ||  |||||||| || | | || |||| ||||    
T  14155617 gtttgggtttttcccgatttcaaaacacgggtataagatgggtaacgaggatatatttatccaccccaaattcatacccaaacccatcctaaatgtagaa 14155518  T
Q  142 aatcaacttattac 155  Q
    |||||| |||||||    
T  14155517 aatcaatttattac 14155504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 15173883 - 15173927
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaa 86  Q
    ||||| ||||| ||| ||||||||| |||||||||||||||||||    
T  15173883 gtttgagtttttcccgatttcaaaatacgggtacgggacgggtaa 15173927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 9e-42; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 60 - 258
Target Start/End: Complemental strand, 42907959 - 42907762
Alignment:
Q  60 ttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgca 159  Q
    |||||||||||| ||||||||| ||||  ||||||||| || | ||||||| |||||||||| |||||| | ||||| |||||||||| ||| |||| |     
T  42907959 ttcaaaacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaactcgtcccgaatgtagaaaatcaatttactact-ct 42907861  T
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||  |||||||||| ||||  |||||||||||||||| | ||||||    
T  42907860 tttatataaatagaaactcaaaccctaaatcatttcactcatacagttagagtcttagtctttcagatgacacacacttatcatagttctatcttttct 42907762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 247
Target Start/End: Original strand, 21956818 - 21957022
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    |||||||||||  || |||| ||||||||||||||| | | ||||| ||||||||| |  | |||||||||||||||||| |||||||  ||||| ||||    
T  21956818 gtttgggttttttccgattttaaaacacgggtacggaatgagtaacggggatataggtgcccaccccgaacccatacccaaactcgttacgaatgtagaa 21956917  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    |||||| |||||||  | ||||| |||||| |||| ||||||||||||||||||| || |||||||||||| || |||||| ||| |||| ||| |||||    
T  21956918 aatcaatttattac-ccttttatataaataaaaacccaaaccctaaatcatttcattcgcacagtcagagtgtcagtcttttagatgacactcatttatc 21957016  T
Q  242 atagtt 247  Q
    ||||||    
T  21957017 atagtt 21957022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 49 - 258
Target Start/End: Original strand, 8843816 - 8844024
Alignment:
Q  49 ttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaac 148  Q
    |||| ||| |||| ||||||| ||| ||||||||||| | |||||||||||| | |||| |||| |||||||| || |||  |||||| ||||||| ||     
T  8843816 tttttcccgattttaaaacacaggtgcgggacgggtagcggggatatagatacccaccc-gaactcatacccaaacccgtcgtgaatgtagaaaattaat 8843914  T
Q  149 ttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttc 248  Q
    |||||||  | || || |||||||||||| ||| ||||||||||||||||| |||||||| |||||  | |||||||| |||| ||||||||||||||||    
T  8843915 ttattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtcttagactttcagatgacactcacttatcatagttc 8844014  T
Q  249 tctattttct 258  Q
    ||| ||||||    
T  8844015 tctcttttct 8844024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 49 - 258
Target Start/End: Original strand, 8856780 - 8856988
Alignment:
Q  49 ttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaac 148  Q
    |||| ||| |||| ||||||| ||| ||||||||||| | |||||||||||| | |||| |||| |||||||| || |||  |||||| ||||||| ||     
T  8856780 tttttcccgattttaaaacacaggtgcgggacgggtagcggggatatagatacccaccc-gaactcatacccaaacccgtcgtgaatgtagaaaattaat 8856878  T
Q  149 ttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttc 248  Q
    |||||||  | || || |||||||||||| ||| ||||||||||||||||| |||||||| |||||  | |||||||| |||| ||||||||||||||||    
T  8856879 ttattacccctttcatataaatagaaacttaaatcctaaatcatttcactcacacagtcacagtcttagactttcagatgacactcacttatcatagttc 8856978  T
Q  249 tctattttct 258  Q
    ||| ||||||    
T  8856979 tctcttttct 8856988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 42 - 249
Target Start/End: Complemental strand, 25941229 - 25941022
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||| || | |||| || | |||||||||||||||||| ||  ||   | ||| ||||    
T  25941229 gtttgggtttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaacatgtctcggatgtagaa 25941130  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    |||||| |||| ||  | ||||| ||||||||||| |||  ||||||||| ||||||| |||  ||| |||||  |||||||||| ||||||||||||||    
T  25941129 aatcaatttataaccccttttatataaatagaaacccaaggcctaaatcaattcactcacacgatcatagtcttagtctttcagatgacattcacttatc 25941030  T
Q  242 atagttct 249  Q
    ||||||||    
T  25941029 atagttct 25941022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 251
Target Start/End: Original strand, 9929187 - 9929380
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactg 157  Q
    ||||||||| |||||||  | |||||||||| |||||||| || | ||||||||| | |||||| | |||| ||||| | |||||||||| |||||||      
T  9929187 atttcaaaatacgggtatagtacgggtaacatggatataggtacccaccccgaactcttacccaaaatcgtcctgaaagtagaaaatcaatttattacct 9929286  T
Q  158 catttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
    | |  || |||||| ||||| |||| |||||| ||||||||| |||||||||||||||||||||| |||  ||| |||||||||||||||||||    
T  9929287 cttccatataaatataaactgaaactctaaataatttcactcacacagtcagagtctcggtcttttagataacaatcacttatcatagttctct 9929380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 258
Target Start/End: Original strand, 33516097 - 33516293
Alignment:
Q  63 aaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcattt 162  Q
    |||||||||||||| || ||||||||||||||||  || | |||||||||| ||||||| || |||    |||| | ||||||||  ||||||  | |||    
T  33516097 aaaacacgggtacgagatgggtaacagggatataagtacccaccccgaacctatacccaaacccgtctcaaatgtaaaaaatcaatgtattacccctttt 33516196  T
Q  163 atgtaaatagaaactcaaaccctaaatcatttcactccca-cagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    || |||||| ||||||||||||||||||||||||||| || | || ||||||| ||||||||||| |||| |||||||||||| |||||| ||||||    
T  33516197 atataaataaaaactcaaaccctaaatcatttcactcacacccgttagagtcttggtctttcagatgacactcacttatcataattctctcttttct 33516293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 258
Target Start/End: Complemental strand, 36919214 - 36918999
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| ||||||||| | || |||||| | |||  ||||| |||||  |||||||| |||| | ||  |||||||||||| |||||||| | ||| ||||    
T  36919214 gtttgagttttccccgactttaaaacatgtgtataggacgagtaacgtggatataggtatccatccttaacccatacccaaactcgttccggatgtagaa 36919115  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    |||||  |||||||  | ||||| ||||||||||||||||| |||||||||||||||| |||||| |||||||| | |||||||| ||||| ||||| ||    
T  36919114 aatcagtttattaccacttttatataaatagaaactcaaactctaaatcatttcactcacacagt-agagtctcagactttcagatgacatccacttgtc 36919016  T
Q  242 atagttctctattttct 258  Q
    ||| |||||| ||||||    
T  36919015 atatttctcttttttct 36918999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 25298827 - 25298993
Alignment:
Q  32 ctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttct 131  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||  ||||||||| | || |||||||||||||||||| || ||| |     
T  25298827 ctttgactgggtttgggtttttccggatttcaaaacacgggtacgggatgggtaatggggatatagctgtccaccccgaacccatacccaaacccgtacc 25298926  T
Q  132 gaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactc 199  Q
     ||||  ||||||||| |||| ||  | ||| | ||||||| ||||||||| ||||||||||||||||    
T  25298927 aaatgttgaaaatcaatttatcaccccttttttataaatag-aactcaaactctaaatcatttcactc 25298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 258
Target Start/End: Original strand, 12075635 - 12075851
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| |||||  |||||||||||||||||||||| ||| ||||| ||||| |||  || | ||||| ||| | ||| || |||||| | ||||| ||||    
T  12075635 gtttgagttttttccaatttcaaaacacgggtacgtgacaggtaatagggagatatgtacccaccccaaactcgtactcaaactcgtccggaatgtagaa 12075734  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    |||||| |||||||    ||||| |||||||||||| |||| || ||||||||||| | |||||| ||||| || || ||| ||| ||||| |||||||     
T  12075735 aatcaatttattacccattttatataaatagaaactaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttatt 12075834  T
Q  242 atagttctctattttct 258  Q
    |||||||||| ||||||    
T  12075835 atagttctctcttttct 12075851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 17113097 - 17113220
Alignment:
Q  132 gaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgaca 231  Q
    ||||| |||||||||| |||||||| | || || |||||| |||| |||| | |||||||||||||||||| |||||||||||| |||||||||| ||||    
T  17113097 gaatgtagaaaatcaatttattact-ctttcatataaataaaaacccaaatcttaaatcatttcactcccaaagtcagagtctcagtctttcagatgaca 17113195  T
Q  232 ttcacttatcatagttctctatttt 256  Q
     ||||||||||||||| ||| ||||    
T  17113196 ctcacttatcatagttatctctttt 17113220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 21714070 - 21714195
Alignment:
Q  133 aatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacat 232  Q
    |||| ||||||| || |||||||  | ||||| |||||||||||||||||||||||||||||||||  |||| | |||||||| |||| ||| | ||||     
T  21714070 aatgtagaaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcacttacacaattagagtctcagtctctcaaatgacac 21714169  T
Q  233 tcacttatcatagttctctattttct 258  Q
    |||||| |||||||||||| ||||||    
T  21714170 tcacttctcatagttctctcttttct 21714195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 39086129 - 39086040
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttct 249  Q
    ||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||| || ||||||| |||| | |||||||||||||||    
T  39086129 tttatataaatagaaacttaaaccctaaatcatttcactcacacagtcagactctcagtttttcagatgacacttacttatcatagttct 39086040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 1724311 - 1724415
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||| |  |||||| || | |||||||||||||||||| || ||| | |||||||    
T  1724311 tgggtttgggttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaacccgtcccgaatgca 1724410  T
Q  139 gaaaa 143  Q
    |||||    
T  1724411 gaaaa 1724415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 29527924 - 29527824
Alignment:
Q  21 ggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    ||||||||  |||||||  ||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||  || | |||||||||||||||||    
T  29527924 ggttttccccgctttgatagggtttgggttttccccgatttcaaaatacgggtacgtgacgggtaacggggatatatgtacccaccccgaacccataccc 29527825  T
Q  121 a 121  Q
    |    
T  29527824 a 29527824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 33616207 - 33616335
Alignment:
Q  130 ctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacga 229  Q
    ||||||| |||||||||| |||||||  | ||||| |||||| |||   ||||||||||||||||||||| ||||||||||||||   | ||||| | ||    
T  33616207 ctgaatgtagaaaatcaatttattaccccttttatataaataaaaatcaaaaccctaaatcatttcactcacacagtcagagtcttaatatttcatatga 33616306  T
Q  230 cattcacttatcatagttctctattttct 258  Q
    || ||||||||||||||||||| ||||||    
T  33616307 cactcacttatcatagttctctcttttct 33616335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 14605926 - 14606013
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactc 126  Q
    ||||||||||||||| || ||||||||| ||||||||| |||||||||||||||||||  || | |||||||||||||||||| ||||    
T  14605926 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactc 14606013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 47103832 - 47103750
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||  |||||||  || | ||||||||||||||||||    
T  47103832 tgggtttgggttttccccaatttcaaaatacgggtacggggcgggtaacgcggatatatgtacccaccccgaacccataccca 47103750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 19883060 - 19883165
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||||||||||||| |||| ||||||||| ||||||| ||||||| ||||||||| |||| |||||||||| |||| || |||||| | ||||| | ||    
T  19883060 gtttgggttttccccgattttaaaacacggatacgggaagggtaacggggatataggtatccaccccgaaccgatacacaaactcgtcccgaatgtataa 19883159  T
Q  142 aatcaa 147  Q
    ||||||    
T  19883160 aatcaa 19883165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 35304517 - 35304736
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt-tctgaatgc 137  Q
    ||||||||||||||| | ||||| ||||||   |||||||||||||||| ||||||||| || | ||||| ||| |||||||| |||| |    |||||     
T  35304517 tgggtttgggttttctctaattttaaaacataagtacgggacgggtaacggggatataggtacctaccccaaactcatacccaaactcatcaaagaatgt 35304616  T
Q  138 agaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcact 237  Q
    || ||||||| |||||||  | ||||| |||| |||||||||||| |||||||||||||| | || || | ||||||| |||||||||  ||   |||||    
T  35304617 aggaaatcaatttattac-ccttttatataaaaagaaactcaaactctaaatcatttcacccacagagccggagtctcagtctttcaggtgatgatcact 35304715  T
Q  238 tatcatagttctctattttct 258  Q
    ||||  |||||||| ||||||    
T  35304716 tatcgcagttctcttttttct 35304736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 25265241 - 25265366
Alignment:
Q  132 gaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgaca 231  Q
    ||||| |||||||||| |||||| | | | ||| ||||||||||||||||  ||||||||||| |||| |||| ||||||||||  | ||||||| ||||    
T  25265241 gaatgtagaaaatcaatttatta-tccttctatataaatagaaactcaaattctaaatcattttactcacacaatcagagtctcaatttttcagatgaca 25265339  T
Q  232 ttcacttatcatagttctctattttct 258  Q
     || |||||||||||||||| ||||||    
T  25265340 gtcgcttatcatagttctctcttttct 25265366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 30266292 - 30266413
Alignment:
Q  1 caaaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagat 99  Q
    |||||||||||  ||||||||| |||||   | ||||||||||||||| ||||  || |||||| || |||||||| ||||||||||| ||||||||  |    
T  30266292 caaaccaaccccgatttgacgggttttctccgatttgactgggtttggtttttttccgatttcataatacgggtacaggacgggtaacggggatatatgt 30266391  T
Q  100 atcgaccccgaacccataccca 121  Q
    ||| ||||||||||||||||||    
T  30266392 atccaccccgaacccataccca 30266413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 30285896 - 30285775
Alignment:
Q  1 caaaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagat 99  Q
    |||||||||||  ||||||||| |||||   | ||||||||||||||| ||||  || |||||| || |||||||| ||||||||||| ||||||||  |    
T  30285896 caaaccaaccccgatttgacgggttttctccgatttgactgggtttggtttttttccgatttcataatacgggtacaggacgggtaacggggatatatgt 30285797  T
Q  100 atcgaccccgaacccataccca 121  Q
    ||| ||||||||||||||||||    
T  30285796 atccaccccgaacccataccca 30285775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 47550363 - 47550436
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||| || |||||||||||||| ||||||||||||||| |||||| || | ||||||||||||||||||    
T  47550363 gttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccataccca 47550436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 7334311 - 7334403
Alignment:
Q  166 taaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||||||||||||||||| |||||||||||||||| |||||| | |||||| |||||| ||  |||||| | |||||||| |||||| ||||||    
T  7334311 taaatagaaactcaaactctaaatcatttcactcacacagttaaagtctcagtcttttagttgacatttatttatcataattctctcttttct 7334403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 31782713 - 31782625
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| || |||||| ||||||||  || | ||||| ||| ||||||||    
T  31782713 tttgactgggtttgggttttccccgatttcaaaatacgggtacggtacaggtaacggggatatatgtacccaccccaaactcataccca 31782625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 48459569 - 48459493
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||| ||||||||||| ||||| || |||||||||||| |||||| || | ||||||||||||||||||    
T  48459569 tgggttttccccgatttcaaaacatgggtatggaacgggtaacaggtatataggtacccaccccgaacccataccca 48459493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 4741220 - 4741392
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| ||||||| | |||| |||||| ||||| ||||||| |||||||||||||  || | |||||||||||||||  | || ||||| ||||| |  |    
T  4741220 gtttgagttttcctcgattttaaaacatgggtatgggacggataacagggatataagtacccaccccgaacccatacaaaaacccgttccgaatgta-ta 4741318  T
Q  142 aatcaacttattactgca-tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctc 215  Q
    |||||| |||||| | || ||||| ||||||||||||||||||||||||| || | ||| |||| ||| ||||||    
T  4741319 aatcaatttatta-tccattttatataaatagaaactcaaaccctaaatcgttcctctcacacaatcatagtctc 4741392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 5902615 - 5902697
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || || ||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  5902615 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 5902697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 6382273 - 6382355
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||||||||| || || |||||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  6382273 tgggtatgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 6382355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 6482036 - 6482118
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||  || |||||  || | ||||||||||||||||||    
T  6482036 tgggtttgggttttccccaatttaaaaacacgggtatgggacgagtaaagggtatatatgtacccaccccgaacccataccca 6482118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 7609064 - 7608982
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || || ||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  7609064 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 7608982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 11028167 - 11028085
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||| || | ||||||||| ||||||||    
T  11028167 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaactcataccca 11028085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 12825456 - 12825510
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaac 87  Q
    |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  12825456 tttgactgagtttgggttttccccgatttcaaaacacgggtatgggacgggtaac 12825510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 37926583 - 37926436
Alignment:
Q  109 gaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtca 208  Q
    ||||||||||||| |||| | ||||||| || |||| || ||||||   | || || | ||| |||||||||||  |||||||||| |||| |||||| |    
T  37926583 gaacccatacccaaactcatcctgaatgtagtaaattaatttattatccctttcatatcaattgaaactcaaactttaaatcatttaactcacacagtta 37926484  T
Q  209 gagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
     |||||| ||||||  || |||| ||||||||||||||||||||||||||    
T  37926483 aagtctcagtcttt--gatgacagtcacttatcatagttctctattttct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 44317629 - 44317547
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || || ||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  44317629 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 44317547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 11173073 - 11173020
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaa 86  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  11173073 tttgactgggtttgggttttccccgatttcaaaatacgggtacgggacaggtaa 11173020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 244
Target Start/End: Complemental strand, 36306875 - 36306674
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaa 142  Q
    ||||| ||||| || ||||||||||||||||| | ||||| |||| ||||||||| || | | |||||| | | || || || ||| | ||||| |||||    
T  36306875 tttggattttctccgatttcaaaacacgggtatgagacggttaacggggatataggtacctaacccgaagctacactcaaacccgtcccgaatgtagaaa 36306776  T
Q  143 atcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatca 242  Q
    ||||| |||||||  | ||||| ||||||||||   ||| | ||||||||||||||  |||| | |||||||| |||||| ||| |||| ||  ||||||    
T  36306775 atcaatttattaccccttttatataaatagaaatcgaaatcataaatcatttcacttacacaattagagtctcagtctttgagatgacactcggttatca 36306676  T
Q  243 ta 244  Q
    ||    
T  36306675 ta 36306674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 223
Target Start/End: Complemental strand, 16575214 - 16575022
Alignment:
Q  31 gctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    ||||||| || |||||||| |||| | |||| ||||| ||||||||||| || ||||  |||||||  || | || ||||||| ||||||| ||||||      
T  16575214 gctttgattgagtttgggtattcctcgattttaaaacgcgggtacgggatggataacgaggatataagtacccactccgaacctatacccaaactcgtct 16575115  T
Q  131 tgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttc 223  Q
    | |||| | ||||| || |||||||    || || |||||||||||||||| | ||||||||||||||| ||| || || ||||| |||||||    
T  16575114 taaatgtaaaaaattaatttattacccttttaatataaatagaaactcaaatcataaatcatttcactcgcacggtgagggtctcagtctttc 16575022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 21544679 - 21544591
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||||||||| |||| ||| ||||||||| ||||||||||||| |||||  ||||||||  || | ||||||||||||||||||    
T  21544679 tttgattgggtttggatttttcccgatttcaaaatacgggtacgggacaggtaatggggatatatgtacccaccccgaacccataccca 21544591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 32596179 - 32596243
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    ||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||| || ||||||    
T  32596179 tttgaatgggttggggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatag 32596243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 258
Target Start/End: Original strand, 9280955 - 9281109
Alignment:
Q  104 accccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccac 203  Q
    ||||||||| ||||| || ||| || ||||||  ||||||| || ||||||   | ||||| || ||||||| ||||||||||||||||| || |  ||     
T  9280955 accccgaactcatactcaaacttgtcctgaatatagaaaataaatttattatcccttttatatagatagaaattcaaaccctaaatcattacattgacaa 9281054  T
Q  204 agtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    | | ||||||||  |||||||||  |||||||||||||||||| |||| ||||||    
T  9281055 aattagagtctcaatctttcagataacattcacttatcatagtactctcttttct 9281109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 15987263 - 15987345
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || ||||||||  |||| |||||||||||| |||| ||||||| || ||||||||| | ||||||||||||||||||    
T  15987263 tgggtatgagttttcccagattttaaaacacgggtatgggatgggtaacgggtatatagatacccaccccgaacccataccca 15987345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 30034667 - 30034549
Alignment:
Q  140 aaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactta 239  Q
    |||||||| ||| |||  ||||||| ||||||||||| ||||||||||||||||||||||  | ||| |||||| |  |||||||   |||| || ||||    
T  30034667 aaaatcaatttactacctcatttatataaatagaaacccaaaccctaaatcatttcactcataaagtgagagtcacaatctttcaagtgacactcgctta 30034568  T
Q  240 tcatagttctctattttct 258  Q
    |||||||| ||| ||||||    
T  30034567 tcatagttttctcttttct 30034549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 1866556 - 1866637
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactc 126  Q
    |||||||| ||| ||||||||| ||||||||| |||||||||   |||||||  |||| |||||||||||||||||| ||||    
T  1866556 tgggtttttcccgatttcaaaatacgggtacgagacgggtaatgcggatatatgtatccaccccgaacccatacccaaactc 1866637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 3737870 - 3737789
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||||  || ||||  || | | |||||||||||||||    
T  3737870 tgggttagggtttttcccaatttcaaaacacgggtatgggacgggtaacgaggttatatgtacccatcccgaacccataccc 3737789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 26564914 - 26564821
Alignment:
Q  50 tttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaa 143  Q
    ||||||| |||||||||| |||||| |||||||||||| || |||||| || | |||||||| ||||||||| || ||| |  |||||||||||    
T  26564914 tttccccgatttcaaaacgcgggtatgggacgggtaacgggtatataggtacccaccccgaaaccatacccaaacccgtcccaaatgcagaaaa 26564821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 37107501 - 37107433
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaa 111  Q
    |||||||||||||| |||||||||||||||||| |||||||||||| || |||||| || | ||||||||    
T  37107501 gtttgggttttccc-aatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 37107433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 10574414 - 10574502
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||  |||||||| |||||| || || ||||||||||||||||| ||||||||  || |  |||||||| ||||||||    
T  10574414 tttgactgggtttgaattttccccgatttcataatacaggtacgggacgggtaacggggatatatgtacccgccccgaactcataccca 10574502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 45065341 - 45065261
Alignment:
Q  41 ggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||| | ||||||||| |||||||||||||| ||||||||||||||  || | | ||||||| ||||||||    
T  45065341 ggtttaggttttcctcgatttcaaaatacgggtacgggacgagtaacagggatatatgtacccatcccgaacgcataccca 45065261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 11122870 - 11122949
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| ||||||||| || || || ||||||||||| |||||||||||| || |||||| || | |||||||||||||||    
T  11122870 tgggtatgggttttctccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatac 11122949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 21423955 - 21423876
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| ||||||||||||||| || ||||||||||| | |||||||||| || |||||| || | ||||| |||||||||    
T  21423955 tgggtatgggttttccccaatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccaaacccatac 21423876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 568538 - 568472
Alignment:
Q  1 caaaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaa 66  Q
    |||||||||||||||||||||| ||||||  | ||||||| |||||||||||| ||| |||||||||    
T  568538 caaaccaaccctaatttgacgggttttccccgatttgactaggtttgggtttttcccgatttcaaaa 568472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 10302178 - 10302096
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||| |||||||||| ||||||||  ||||||| | |||||||||| ||| ||||  || | ||||||||||||||||||    
T  10302178 tgggtttaggttttccccgatttcaaagtacgggtatgagacgggtaacggggttatatgtacccaccccgaacccataccca 10302096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 31752550 - 31752468
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| ||||||||||||||||| | |||| |||||  | |||||| |  | ||||||||||||||||||    
T  31752550 tgggtatgggttttccccgatttcaaaacacgggtatgagacgagtaacgagtatataggttcccaccccgaacccataccca 31752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 39047046 - 39046964
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||||||||| ||||||||||| |||||  ||||| || |||||| || | || || ||||||||||||    
T  39047046 tgggtatgggttttccccaatttccaaacacgggtatgggacatgtaacgggtatataggtacccactccaaacccataccca 39046964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 39375369 - 39375303
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgacccc 108  Q
    |||||| |||||||| ||||||||| |||||||  ||||||||||| || ||||||||||| |||||    
T  39375369 gtttggcttttccccgatttcaaaatacgggtataggacgggtaacgggtatatagatatccacccc 39375303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 41915000 - 41915054
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatata 96  Q
    ||||||||||||||| ||||||||| | |||||||||| ||||||| ||||||||    
T  41915000 gtttgggttttccccgatttcaaaatatgggtacgggaagggtaacggggatata 41915054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 43309574 - 43309520
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatata 96  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||| ||| ||||    
T  43309574 gtttgggtttttcccgatttcaaaacacgggtatgggacgggtaacggggttata 43309520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 43553521 - 43553354
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactg 157  Q
    ||||||||||||||||| |||||| | || | | ||||||| ||| ||||||||| |||| | | |||||| | |||||  ||||||||| |||||||      
T  43553521 atttcaaaacacgggtatgggacgagcaatatgaatatagacatccaccccgaactcatatcgaaactcgtcccgaatgttgaaaatcaatttattaccc 43553422  T
Q  158 catttat----gtaaatag-aaactcaaaccctaaatcatttcactcccacagtcagagtctcggtct 220  Q
    | |||||     ||||||| |||||| || ||||||||||||||||| ||| |||| |||||| ||||    
T  43553421 cttttatatagataaatagaaaactctaaacctaaatcatttcactcacacggtcaaagtctcagtct 43553354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 23927604 - 23927729
Alignment:
Q  1 caaaccaaccctaatttgacggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagata 100  Q
    |||||||| |||||||||| || |||    ||||||  |||||||| ||||| | | ||||||||||||  ||||  ||||| ||||| |||||||| ||    
T  23927604 caaaccaaacctaatttgatgggtttttccgctttggttgggtttgagttttgctcgatttcaaaacacaagtacaagacggttaacatggatataggta 23927703  T
Q  101 tcgaccccgaacccatacccagactc 126  Q
    || ||||||||||| |||||| ||||    
T  23927704 tccaccccgaacccctacccaaactc 23927729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 24637281 - 24637240
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggta 74  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  24637281 tttgactgggtttgggttttccccgatttcaaaatacgggta 24637240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 31415935 - 31416008
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaaccca 115  Q
    |||||| ||||| || ||||||||| |||||||||||| || |||||||||||||  || | ||||||||||||    
T  31415935 gtttggattttctccgatttcaaaatacgggtacgggatggataacagggatatatgtacccaccccgaaccca 31416008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 19548945 - 19548985
Alignment:
Q  46 gggttttccccaatttcaaaacacgggtacgggacgggtaa 86  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  19548945 gggttttccccgatttcaaaacacaggtacgggacgggtaa 19548985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 31918565 - 31918641
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||| || || ||||||||||| |||||| ||||  || |||||| || | ||||||||||||||||||    
T  31918565 tgggttttccccgatctcgaaacacgggtatgggacgagtaatgggtatatagttacccaccccgaacccataccca 31918641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 32585573 - 32585501
Alignment:
Q  49 ttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || ||||||||||||||||| ||||| |||||| || |||||| || | |||| |||||||||||||    
T  32585573 ttttctccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccctgaacccataccca 32585501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 55826630 - 55826702
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccata 117  Q
    |||||||||||| || || |||||| |||| |||||||||||| || |||||| || | ||||||||||||||    
T  55826630 tgggttttccccgatctcgaaacacaggtatgggacgggtaacgggtatataggtacccaccccgaacccata 55826702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 43893311 - 43893240
Alignment:
Q  50 tttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||| || || ||||||||||| |||||||||||| || |||||| |||| ||||||||  ||||||||    
T  43893311 tttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaattcataccca 43893240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 12505652 - 12505718
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcaga 226  Q
    ||||| |||||||||||| ||||  |||||||||||| || |||| ||| |||||| ||||||||||    
T  12505652 tttatataaatagaaacttaaacattaaatcatttcattcgcacaatcaaagtctcagtctttcaga 12505718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 50684556 - 50684470
Alignment:
Q  44 ttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    |||||||| |||| |||| |||| |||| ||||||||||||||| | |||||||||| | | || |||| |||||||| || |||||    
T  50684556 ttgggtttaccccgattttaaaatacggatacgggacgggtaacggagatatagatacccatccggaactcatacccaaacccgttc 50684470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 55783469 - 55783424
Alignment:
Q  168 aatagaaactcaaaccctaaatcatttcactcccacagtcagagtc 213  Q
    |||||||||||||| ||||||||||||||||| || ||| ||||||    
T  55783469 aatagaaactcaaatcctaaatcatttcactctcaaagttagagtc 55783424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 55847651 - 55847606
Alignment:
Q  168 aatagaaactcaaaccctaaatcatttcactcccacagtcagagtc 213  Q
    |||||||||||||| ||||||||||||||||| || ||| ||||||    
T  55847651 aatagaaactcaaatcctaaatcatttcactctcaaagttagagtc 55847606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 12505545 - 12505577
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggta 74  Q
    ||||||||||||||| |||||||||||||||||    
T  12505545 gtttgggttttccccgatttcaaaacacgggta 12505577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 37384246 - 37384183
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttca 224  Q
    ||||| |||||||||  ||||||||||||||||||||||| ||| || | ||| |||||||||||    
T  37384246 tttatataaatagaagttcaaaccctaaatcatttcactcacacggtta-agtttcggtctttca 37384183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 256
Target Start/End: Original strand, 4589 - 4797
Alignment:
Q  47 ggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca-gactcgttctgaatgcagaaaatc 145  Q
    |||||||||||||||||||| ||||||| ||||| |||||||||||||||| || | ||| |||||||||||| | | | | ||  ||||| ||||||||    
T  4589 ggttttccccaatttcaaaatacgggtatgggacaggtaacagggatatagctacccaccacgaacccatacctaagccacctt--gaatgtagaaaatc 4686  T
Q  146 aacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatag 245  Q
    || |||| ||  | ||||| ||||||||||   |||| |||||||||||||||| ||||||||||||| |||||||| |||  ||| |||||||||||||    
T  4687 aaattataaccccttttatataaatagaaatcaaaactctaaatcatttcactcacacagtcagagtcacggtcttttagataacactcacttatcatag 4786  T
Q  246 ttctctatttt 256  Q
    |||||| ||||    
T  4787 ttctctctttt 4797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 251
Target Start/End: Original strand, 40187661 - 40187869
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| |||  ||||  ||| |||||||| |||||| | ||||  ||||    
T  40187661 gtttgggttttccccaatttcaaaacacgggtgcgagacgggtaacggagatataggtattcaccca-aactcatacccaaactcgtcccgaatatagaa 40187759  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    ||| || |||||||  | ||||| ||||||| ||   ||| |||||||||||| |||| || ||||||||| ||  ||||||||| |||| |||||||||    
T  40187760 aattaatttattacctcttttatataaatagtaatgaaaatcctaaatcattttactcacatagtcagagtttcaatctttcagatgacactcacttatc 40187859  T
Q  242 atagttctct 251  Q
    ||||||||||    
T  40187860 atagttctct 40187869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 260
Target Start/End: Complemental strand, 17153281 - 17153036
Alignment:
Q  15 tttgacggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaaccc 114  Q
    |||||||||||||  || ||| |||| ||||| |||||  || |||| |||||| ||||||||||||| ||||   ||||||  ||   | ||| |||||    
T  17153281 tttgacggttttctctgttttaactgagtttgagttttttccgattttaaaacatgggtacgggacggataactatgatatatgtactcatcccaaaccc 17153182  T
Q  115 atacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtct 214  Q
    ||||||| || ||| | ||||| |||||||||| |||||||  | | ||  ||||||||||  |||| ||||||| ||||||||| ||||||||||  ||    
T  17153181 atacccaaacccgtcccgaatgtagaaaatcaatttattaccccttctagataaatagaaatccaaaacctaaataatttcactcacacagtcagatact 17153082  T
Q  215 cggtctttcagacgacattcacttatcatagttctctattttcttc 260  Q
    | |||||||| | || ||||||||||||||||||||||||||||||    
T  17153081 cagtctttcaaatgagattcacttatcatagttctctattttcttc 17153036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 258
Target Start/End: Complemental strand, 29665040 - 29664840
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactg 157  Q
    ||||||||||||||||||  || ||||||| ||||||||| || | ||  ||||| |||||||| || ||| | ||||| | |||||||| ||| |||      
T  29665040 atttcaaaacacgggtacatgatgggtaacggggatataggtacccacttcgaactcatacccaaacccgtcccgaatgtacaaaatcaatttactaccc 29664941  T
Q  158 catttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttc 257  Q
    | ||||| ||||||||||||||||| ||||||||||||| |  ||  ||||||||||| || ||||||| |||| |||||||||||| |||||| |||||    
T  29664940 cttttatttaaatagaaactcaaactctaaatcatttcatttacattgtcagagtctcagtatttcagatgacactcacttatcataattctctcttttc 29664841  T
Q  258 t 258  Q
    |    
T  29664840 t 29664840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 38006464 - 38006552
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||  |||||| || | ||||||||||||||||||    
T  38006464 tttgactgggtttgggttttccccaatttcaaaatacgggtatgggacgcgtaacagatatataggtacccaccccgaacccataccca 38006552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 251
Target Start/End: Complemental strand, 38973007 - 38972798
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||||||||| ||| ||||||||||| ||||| ||||  |||||| || |||||| || | ||||||||||||||| || || | |    |||||| ||    
T  38973007 gtttgggtttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtacccaccccgaacccatactcaaacccatctcaaatgcataa 38972908  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    |||||| ||||||   | ||||| ||||| |||||| |||||||||||||||| | || ||| || |||||||   ||||||| | |||| |||||||||    
T  38972907 aatcaatttattaacccttttatataaatcgaaactgaaaccctaaatcatttgattcacactgttagagtctaaatctttcatatgacactcacttatc 38972808  T
Q  242 atagttctct 251  Q
    ||||||||||    
T  38972807 atagttctct 38972798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 8020694 - 8020518
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaa 147  Q
    ||||||||| |||||||||||||||||| | | ||||||||||||||||| ||   | | ||||| ||||| || || ||||||||||| ||||||||||    
T  8020694 gttttccccgatttcaaaacacgggtactgaatgggtaacagggatataggtactcatctcgaactcatacgcaaacccgttctgaatgtagaaaatcaa 8020595  T
Q  148 cttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttca 224  Q
     ||| |||  | ||||| ||||   ||||  ||||||||||| ||| |||||  |||||||||||||| ||||||||    
T  8020594 tttactaccccttttatataaaggaaaacctaaaccctaaattattccactcaaacagtcagagtctcagtctttca 8020518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 251
Target Start/End: Original strand, 27900404 - 27900612
Alignment:
Q  41 ggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcaga 140  Q
    |||||| ||||| ||| ||||||||||| ||||| |||||||||||   |||||||| || | | | |||||||||||||| |  ||  | ||||| | |    
T  27900404 ggtttgagtttttcccgatttcaaaacatgggtatgggacgggtaatgtggatataggtacccatctcgaacccatacccaaatccgccccgaatgtata 27900503  T
Q  141 aaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttat 240  Q
    ||||||| ||||| |  | ||||| |||||||||||| |||||||||||||||||| || |||| |||||   || |||||||||| |||| |||||||     
T  27900504 aaatcaatttatttcctcttttatataaatagaaactgaaaccctaaatcatttcagtcacacattcaga--atcagtctttcagatgacactcacttaa 27900601  T
Q  241 catagttctct 251  Q
     ||||||||||    
T  27900602 tatagttctct 27900612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 4920914 - 4920832
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||| |||| ||||||||||||||||||    
T  4920914 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccataccca 4920832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 35584084 - 35583986
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||||| | || ||| ||||||  ||||||| ||||||    
T  35584084 tttatataaatagaaactcaaaccctaaatcattttgctcacacagtcagagtctcagtctttcagatgtcactcatttatcactgttctctgttttct 35583986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 204
Target Start/End: Complemental strand, 6810254 - 6810081
Alignment:
Q  31 gctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    ||||||| || ||||||||||||||| |||| | ||||||||||||| |||||||||  |||||||  ||   |||||||||||||||||| || | | |    
T  6810254 gctttgaatgagtttgggttttccccgattttagaacacgggtacggaacgggtaacgaggatataagtactcaccccgaacccatacccaaacccatcc 6810155  T
Q  131 tgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccaca 204  Q
     |||||  ||||||||| ||||| |  | ||||| | ||||||||| |||||| ||||| ||||||||| ||||    
T  6810154 cgaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatgatttcactcacaca 6810081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 16311313 - 16311479
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactg 157  Q
    ||||||||||||| ||||| ||||| |||||||||||||| || | ||||||||||||||  || ||  ||   |||||  ||||||||| ||||||       
T  16311313 atttcaaaacacgagtacgagacggataacagggatataggtacccaccccgaacccatattcaaacctgtctcgaatgttgaaaatcaatttattatcc 16311412  T
Q  158 catttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcag 225  Q
    | ||||| ||||||||||| ||||||||||||||||| |||| || ||||  |||||| |||||||||    
T  16311413 cttttatataaatagaaac-caaaccctaaatcattttactcgcagagtctcagtctcagtctttcag 16311479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 28569025 - 28569104
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||| |||||||| |||||||||  ||||||||||||||||||| ||||||||| || | ||||||||||||||||||    
T  28569025 gtttggattttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggtacccaccccgaacccataccca 28569104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 12834575 - 12834657
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||||||||| |||||||||||||| || || ||||||||||||||| |||||| || | ||||||||||||||||||    
T  12834575 tgggtatgggttttctccaatttcaaaacatggatatgggacgggtaacaggtatataggtacctaccccgaacccataccca 12834657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 204
Target Start/End: Complemental strand, 12457613 - 12457440
Alignment:
Q  31 gctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    ||||||| |||||||||| ||||| | ||||||||| ||||||| ||||| |||||||  |||||| | |   || |||||| |||||||| || ||| |    
T  12457613 gctttgattgggtttggggtttcctcgatttcaaaatacgggtatgggacaggtaacatagatataaacactcactccgaactcatacccaaacccgtcc 12457514  T
Q  131 tgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccaca 204  Q
     ||||| |||||||||| |||||||  | || || |||||||||||  |||  |||||||||||||||| ||||    
T  12457513 cgaatgtagaaaatcaatttattacccctttaatataaatagaaacctaaagtctaaatcatttcactcacaca 12457440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 12712519 - 12712640
Alignment:
Q  1 caaaccaaccctaatttgac-ggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagat 99  Q
    |||||||||||  ||||||| ||||||||  | |||||||| |||||||||||| || ||||||||| ||||||||||||||| |||| | ||||||  |    
T  12712519 caaaccaaccccgatttgacaggttttccccgatttgactgagtttgggttttctccgatttcaaaatacgggtacgggacggataacggagatatatgt 12712618  T
Q  100 atcgaccccgaacccataccca 121  Q
    | | ||| ||||||||||||||    
T  12712619 acccacctcgaacccataccca 12712640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 18451893 - 18452105
Alignment:
Q  46 gggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatc 145  Q
    ||||||||||| |||| |||| || |||||| |||  ||||||  ||||||  || | ||||||||| ||||  || |||||| | || || ||||||||    
T  18451893 gggttttccccgatttgaaaatacaggtacgagacatgtaacacagatataagtacccaccccgaactcataatcaaactcgtcccgattgtagaaaatc 18451992  T
Q  146 aacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatag 245  Q
    || ||||||   | ||||| | ||||||||  | || | || |||||||||||| |||||| | ||||||||||||||||| || | ||||||||||| |    
T  18451993 aatttattatcccttttatattaatagaaatacgaatcttagatcatttcactcacacagttaaagtctcggtctttcagatgatagtcacttatcatgg 18452092  T
Q  246 ttctctattttct 258  Q
    |||||| ||||||    
T  18452093 ttctctcttttct 18452105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 10822521 - 10822608
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    ||||||||| ||||||||||| || |||||||||||||||||  ||||||||||| ||| ||||  || | |||||||||||||||||    
T  10822521 tttgactggatttgggttttctccgatttcaaaacacgggtataggacgggtaacggggttatatgtacccaccccgaacccataccc 10822608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 4583207 - 4583125
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||| || |||||| |  | ||||| ||||||||||||    
T  4583207 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggttcccaccccaaacccataccca 4583125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 12770719 - 12770647
Alignment:
Q  166 taaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactt 238  Q
    |||||||||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||||| ||||||    
T  12770719 taaatagaaattcaaaccctaaatcatttcactcgtacaaccaaagtctcggtctttcaaacgacactcactt 12770647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 23044992 - 23045072
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    ||||||| |||||||||| ||||||||| |||||||||||| ||||||| | ||||||  || | ||||||||||||||||    
T  23044992 tgggtttaggttttccccgatttcaaaatacgggtacgggatgggtaacggagatatatgtacccaccccgaacccatacc 23045072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 24207772 - 24207559
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatat--cgaccccgaacccatacccagactcgttctgaatg 136  Q
    |||||||| ||||||||| |||||||||||| ||||  | |||  |||||||||||||  |||  | |||| ||| ||||||||| || ||     ||||    
T  24207772 tgggtttgagttttccccgatttcaaaacacaggtatcgaacgaataacagggatataagtatacccaccctgaagccatacccaaacccg-----aatg 24207678  T
Q  137 cagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcac 236  Q
     ||||||| || |||||| | | ||||| |||||| ||||| ||||||||||| | ||||||| |||    |||||||| |||||||||| |||| | ||    
T  24207677 tagaaaattaatttattaatccttttatataaataaaaactaaaaccctaaataacttcactcacac---tagagtctcagtctttcagatgacactaac 24207581  T
Q  237 ttatcatagttctctattttct 258  Q
    |||| |||||||||| ||||||    
T  24207580 ttataatagttctctcttttct 24207559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 2681301 - 2681222
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||| ||||||||| || ||||||||| ||||||  |||||||   |||| ||||||||||||||||||    
T  2681301 gtttgggttttccccgatttcaaaatacaggtacgggatgggtaatggggatatgagtatccaccccgaacccataccca 2681222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12773783 - 12773901
Alignment:
Q  1 caaaccaaccctaatttgac-ggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagat 99  Q
    |||||||||||  ||||||| ||||||||  | ||||| || |||||||||||| || ||||||||| ||||||||||||||| |||| | ||||||  |    
T  12773783 caaaccaaccccgatttgacaggttttccccgatttgattgagtttgggttttctccgatttcaaaatacgggtacgggacggataacggagatatatgt 12773882  T
Q  100 atcgaccccgaacccatac 118  Q
    | | ||| |||||||||||    
T  12773883 acccacctcgaacccatac 12773901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 12866552 - 12866634
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || |||||| || ||||||||||| ||||| ||||||||||||||| |||||| || | ||| ||||||||||||||    
T  12866552 tgggtatgagttttctccgatttcaaaacatgggtatgggacgggtaacaggtatataggtacccaccgcgaacccataccca 12866634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 20973497 - 20973579
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| ||||  ||||||||||| |||| ||||||| || |||||| || | ||||||||||||||||||    
T  20973497 tgggtatgggttttccccgattttcaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccataccca 20973579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 32574941 - 32575055
Alignment:
Q  41 ggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcaga 140  Q
    |||||||||||||||| |||||||||||| | ||||||| |||||||| |||||||  || | | |||||||||| ||||| || ||  | ||||| |||    
T  32574941 ggtttgggttttccccgatttcaaaacacagatacgggatgggtaacatggatatatgtacccatcccgaacccaaacccaaacccgccccgaatgtaga 32575040  T
Q  141 aaatcaacttattac 155  Q
    | ||||| |||||||    
T  32575041 atatcaatttattac 32575055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 251
Target Start/End: Original strand, 7350448 - 7350620
Alignment:
Q  79 acgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactc 178  Q
    ||||||||  |||||||||  ||| |||||||||||||||  | || |||    |||| ||||||| || ||||||  || ||||| ||||||| ||       
T  7350448 acgggtaatggggatataggcatccaccccgaacccatacttaaacccgtctcaaatgtagaaaattaatttattatcgcttttatataaatagtaatcg 7350547  T
Q  179 aaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
    |||||||||||||||| |||| || ||| |||||| |  ||||| |||||||  |||||||||||||||||||    
T  7350548 aaaccctaaatcattttactcacatagttagagtcgcaatctttgagacgacgctcacttatcatagttctct 7350620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 12709469 - 12709397
Alignment:
Q  166 taaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactt 238  Q
    |||||||||| |||||||||||||||||||||||  |||  || |||||| |||||||| |||||| ||||||    
T  12709469 taaatagaaattcaaaccctaaatcatttcactcgtacaaccaaagtctcagtctttcaaacgacactcactt 12709397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 15890288 - 15890213
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||| || ||||||||||||||||| |||||||||||| || |||||| || | | ||||||||||||||||    
T  15890288 tgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatataggtaccca-cccgaacccataccca 15890213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 17853300 - 17853375
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||| |||||||| |||||||| |||||||||||| |  ||||||||| | || |||||||||||||||    
T  17853300 tgggttttccccgatttcaaa-cacgggtatgggacgggtaacggatatatagatacccactccgaacccataccca 17853375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 40517894 - 40517815
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||||||| ||  ||||||||||||| |||| ||||||| || |||||| || | |||||||||||||||    
T  40517894 tgggtatgggttttccccgatcccaaaacacgggtatgggatgggtaacgggtatatagttacccaccccgaacccatac 40517815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 6155924 - 6156001
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||| |||||||||||||||||  |||| ||||  ||| |||||  || | ||||||||||||||||||    
T  6155924 gtttgggttttccccgatttcaaaacacgggtataggacaggta--aggtatatatgtacccaccccgaacccataccca 6156001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 35311891 - 35311831
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||||||||||||||| ||||||||||||||  |||||| || | || ||||||||||||    
T  35311891 atttcaaaacacgggtatgggacgggtaacagatatataggtacccactccgaacccatac 35311831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 10127162 - 10127116
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggta 85  Q
    ||||| |||||||||||| || |||||||||||||| ||||||||||    
T  10127162 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggta 10127116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 12447505 - 12447387
Alignment:
Q  3 aaccaaccctaatttgacggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatc 102  Q
    |||||| || |||||||||| |||||    ||||||||||||||||||||||   |||  ||||||| |||| ||||| |||||  || |||||| || |    
T  12447505 aaccaaacccaatttgacggatttccccattttgactgggtttgggttttccttgattgtaaaacacaggtatgggacaggtaatgggtatataggtacc 12447406  T
Q  103 gaccccgaacccataccca 121  Q
     |||||||||| |||||||    
T  12447405 caccccgaacctataccca 12447387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 29245952 - 29246034
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || |||||| || ||||||||||||||||| ||||||  ||||| | |||||| || | ||||| ||||||||||||    
T  29245952 tgggtatgagttttctccgatttcaaaacacgggtatgggacgaataacatgtatataggtacccaccccaaacccataccca 29246034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 33728002 - 33728060
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    ||||| ||| |||||||| || |||||||||||||| |||||||||||| || ||||||    
T  33728002 tgggtatggattttccccgatctcaaaacacgggtatgggacgggtaacgggtatatag 33728060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 42987481 - 42987562
Alignment:
Q  40 gggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||| ||| |||||||| || |||||||||||||| |||||| ||||| |  |||||| || | | ||||||||||||||||    
T  42987481 gggtatggattttccccgatctcaaaacacgggtatgggacgtgtaacggatatataggtacccatcccgaacccataccca 42987562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 457464 - 457532
Alignment:
Q  130 ctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcact 198  Q
    ||||||| | |||||||| |||||||  | ||||| |||||||||||  ||| ||||||||||||||||    
T  457464 ctgaatgtataaaatcaatttattacaccttttatataaatagaaaccaaaatcctaaatcatttcact 457532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 2985241 - 2985177
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    |||||||||||||| |||||| || ||||||| ||| ||||  |||||||||||| || ||||||    
T  2985241 tttgactgggtttgagttttctccgatttcaagacatgggtttgggacgggtaacgggtatatag 2985177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 8453350 - 8453424
Alignment:
Q  13 aatttgacggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacag 89  Q
    ||||||| || ||||| || |||||| ||||||||| |||||| | |||||||||||||||| |||| |||||||||    
T  8453350 aatttgatgggtttccctgttttgac-gggtttgggctttcccga-tttcaaaacacgggtatgggatgggtaacag 8453424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 16366570 - 16366662
Alignment:
Q  160 tttatgtaaatagaaactcaaaccc-taaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
    ||||| |||| ||||||||||| || |||||||||||  || |||| ||||| |||| | || ||||| |||| |||||||||| ||||||||    
T  16366570 tttatataaaaagaaactcaaaaccataaatcatttccgtcacacaatcagaatctcagcctatcagatgacactcacttatcagagttctct 16366662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34259382 - 34259286
Alignment:
Q  1 caaaccaaccctaatttgac-ggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatata 96  Q
    |||||||||||  ||||||  |||||| | || ||||||||||||||  |||||| | ||||||||| | |||||| |||||||||||  |||||||    
T  34259382 caaaccaaccccgatttgataggtttttcctgatttgactgggtttgaattttcctcgatttcaaaatatgggtaccggacgggtaacgaggatata 34259286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 251
Target Start/End: Original strand, 35248386 - 35248593
Alignment:
Q  40 gggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcag 139  Q
    ||||||||||||||| | ||| ||||||||||||| |||||||||||  |||||| || || | |||||||||||||||||| || ||| ||||||| ||    
T  35248386 gggtttgggttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccatacccaaacccgtcctgaatgtag 35248485  T
Q  140 aaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactta 239  Q
    |||   ||  || |||  | ||||| |||||||||| | ||||||||||||||||||||| ||||| ||||||||| |||||||| | |||| || ||||    
T  35248486 aaa---aatata-taccccttttatataaatagaaaatgaaaccctaaatcatttcactcacacagacagagtctcagtctttcaaatgacactcgctta 35248581  T
Q  240 tcatagttctct 251  Q
    | ||||||||||    
T  35248582 ttatagttctct 35248593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 258
Target Start/End: Complemental strand, 30696994 - 30696794
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactg 157  Q
    |||| |||||| || |||| |||||||||||| ||||||  || | ||||||||| |||||||| ||   | |  |||| | |||||||| |||||||      
T  30696994 attttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaacctatcccaaatgtaaaaaatcaatttattaccc 30696895  T
Q  158 catttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttc 257  Q
      ||||| |||||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||| | ||||||| |||| |||||||||||||||||    
T  30696894 attttatataaatagaaattcaaaccctaaatcatgtcactcacacagttagagtctcggtctttcatatgacattctcttaccatagttctctattttc 30696795  T
Q  258 t 258  Q
    |    
T  30696794 t 30696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 25210467 - 25210248
Alignment:
Q  38 ctgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgc 137  Q
    |||||||| |||||| ||| | || |||||||||||| ||||||||||||  |||||||  || | ||||| |||||||||| | || | | | |||||     
T  25210467 ctgggtttaggtttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaacccctcccgaatgt 25210368  T
Q  138 agaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcact 237  Q
    |||||||||| || ||||    ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| |  ||| ||| | || |||||    
T  25210367 agaaaatcaatttgttacccattttatataaatagaaactcaaaccctaaatcatttcactcacacagtcggagtctcagaattttagatggcactcact 25210268  T
Q  238 tatcatagttctctattttc 257  Q
    |||||||||| ||| |||||    
T  25210267 tatcatagttatctcttttc 25210248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 13954735 - 13954615
Alignment:
Q  138 agaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcact 237  Q
    ||||||||||||||||||  | ||||| ||||||||||||| |||||||||||||||||||| | | || |||||||| | |||||||| |||| |||||    
T  13954735 agaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctcagactttcagatgacactcact 13954636  T
Q  238 tatcatagttctctattttct 258  Q
    ||| |||||||||| ||||||    
T  13954635 tatgatagttctctcttttct 13954615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 14095942 - 14095822
Alignment:
Q  138 agaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcact 237  Q
    ||||||||||||||||||  | ||||| ||||||||||||| |||||||||||||||||||| | | || |||||||| | |||||||| |||| |||||    
T  14095942 agaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctcagactttcagatgacactcact 14095843  T
Q  238 tatcatagttctctattttct 258  Q
    ||| |||||||||| ||||||    
T  14095842 tatgatagttctctcttttct 14095822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 6027852 - 6027993
Alignment:
Q  3 aaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatat 101  Q
    |||||| || |||||||||| ||||||  | ||||| |||||||||||||||||| |||| |||||| ||||| | ||||||||||||| |||||| ||     
T  6027852 aaccaaacccaatttgacgggttttccccgttttgattgggtttgggttttccccgattttaaaacatgggtatgagacgggtaacaggtatataggtac 6027951  T
Q  102 cgaccccgaacccatacccagactcgttctgaatgcagaaaa 143  Q
    | ||||||||||||||| || || ||| ||||||||||||||    
T  6027952 ccaccccgaacccatactcatacccgtcctgaatgcagaaaa 6027993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 15546833 - 15546751
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||| ||| | |||| |||||||||||||    
T  15546833 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacatggttatatatacccaccctgaacccataccca 15546751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 34214778 - 34214875
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttct 258  Q
    ||||| ||||||||||||||| | |||||||||||||||  ||||||||||||||| |||||||| | |||| |||||||||||||||| || ||||||    
T  34214778 tttatataaatagaaactcaa-ctctaaatcatttcactaacacagtcagagtctcagtctttcacatgacactcacttatcatagttcgctcttttct 34214875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 251
Target Start/End: Complemental strand, 35965460 - 35965211
Alignment:
Q  3 aaccaaccctaatttgac-ggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatat 101  Q
    |||||| |||| |||||| |||||||   ||||||| |||||||| ||||||||| |||||||||||||||||  ||| | ||||  |||||| |  ||     
T  35965460 aaccaaacctattttgactggttttctccgctttgattgggtttgagttttccccgatttcaaaacacgggta-tggatgtgtaatggggatacatgtac 35965362  T
Q  102 cgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttat-gtaaatagaaactcaaaccctaaatcatttcactcc 200  Q
    | || ||||||||||||||| || ||| | ||||| |||||||||| ||||| |  | |||||  ||||||| || | || || |||||||||||||||     
T  35965361 ccactccgaacccatacccaaacccgtcccgaatgtagaaaatcaatttattgccccttttatactaaataggaattgaatccataaatcatttcactca 35965262  T
Q  201 cacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
     ||||| ||  |||| || |||||||  |||||||||||||||||||||||    
T  35965261 tacagtgaggatctcagtttttcagataacattcacttatcatagttctct 35965211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 31600889 - 31600980
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
    ||||| ||||||||||||||||| ||||||||||||||||  ||||| |||||||  |||||||| | |||  |||||||||||||||||||    
T  31600889 tttatataaatagaaactcaaactctaaatcatttcactcatacagttagagtcttagtctttcatatgacgctcacttatcatagttctct 31600980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 24414140 - 24414214
Alignment:
Q  47 ggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||| || |||||||||||||| ||||||||||||||| |||||| || | ||||||||||||||||||    
T  24414140 ggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccataccca 24414214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 37106781 - 37106700
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||| || |||||| || | || ||||||||||||||    
T  37106781 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccactccgaacccataccc 37106700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 11959071 - 11958912
Alignment:
Q  72 gtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactgcatttatgtaaata 171  Q
    ||||||||||||||||  |||||||  ||    |||||||| |||||||| |||| |  |||||| | |||||||| |||||||  | ||||| |||  |    
T  11959071 gtacgggacgggtaacgaggatatatgtacatgccccgaactcatacccaaactcatcatgaatgtataaaatcaatttattacctcttttatataagca 11958972  T
Q  172 gaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgaca 231  Q
    |||||||||| |||| ||||||| |||  |||||| ||||||||||||||||||| ||||    
T  11958971 gaaactcaaaacctagatcatttaacttacacagttagagtctcggtctttcagatgaca 11958912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 9632475 - 9632393
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || || ||||||||||| |||||||||||  || |||||| |||| ||||||||||||||||||    
T  9632475 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaatgggtatataggtatccaccccgaacccataccca 9632393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 22900883 - 22900801
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||| ||| ||||||||||||||||| |||||| ||||| ||| |||| ||| | ||||||||| ||||||||    
T  22900883 tgggtttgggtttttcccgatttcaaaacacgggtatgggacgagtaacggggttatatatacccaccccgaactcataccca 22900801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 30847035 - 30846953
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || || ||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  30847035 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 30846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 38342519 - 38342601
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||| ||||||||| |||| |||| |||| ||||||||||||||| ||||||||  || | ||||||||||||||||||    
T  38342519 tgggtttgagttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccataccca 38342601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 6164473 - 6164558
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagac 124  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| | ||||||  || | ||||||||| |||||| ||||    
T  6164473 tgggtttgggttttccccaatttcaaaatttgggtacgggacgggtaacggtgatatatgtacccaccccgaactcatacctagac 6164558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 251
Target Start/End: Original strand, 34544314 - 34544523
Alignment:
Q  43 tttgggttttccccaatttcaaaa-cacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| |||||||| ||||||||| ||||| |||| || | ||||||| |||||||||| | || |  ||| ||||| || || | | | ||||| ||||    
T  34544314 tttggattttccccgatttcaaaaacacggatacgagatgtgtaacagagatatagatacccacacaaaactcatactcaaacccctcccgaatgtagaa 34544413  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
    |||| | |||||||    ||||| |||||| ||||||||||||||||| |||||| || ||||   ||| ||||| ||||| ||| |||| |||||| ||    
T  34544414 aatctatttattacccattttatataaataaaaactcaaaccctaaataatttcattcacacaacgagactctcgttcttttagatgacaatcacttctc 34544513  T
Q  242 atagttctct 251  Q
    ||||||||||    
T  34544514 atagttctct 34544523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 40734710 - 40734768
Alignment:
Q  166 taaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttca 224  Q
    |||||| ||||  ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  40734710 taaataaaaaccaaaaccctaaatcatttcactcacacagtcagagtctcagtctttca 40734768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 8915959 - 8916016
Alignment:
Q  61 tcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    |||||||||||||| ||||||||||||||| |||||| || | |||||||||||||||    
T  8915959 tcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatac 8916016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 24051624 - 24051705
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    |||||||||| |||| || |||| |||| ||| ||| |||||||||||||||||||||  || | |||||||||||||||||    
T  24051624 tgggtttgggatttctccgattttaaaatacgagtatgggacgggtaacagggatatatgtacctaccccgaacccataccc 24051705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 35409274 - 35409375
Alignment:
Q  161 ttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttcttc 260  Q
    |||| |||||| |||| ||||| |||||  ||||||||  ||||||||||||||| ||||| || | |||| ||||||||||||||||  | ||||||||    
T  35409274 ttatataaataaaaacccaaactctaaactatttcacttacacagtcagagtctcagtcttacatatgacactcacttatcatagttcattcttttcttc 35409373  T
Q  261 gt 262  Q
    ||    
T  35409374 gt 35409375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 13531917 - 13531873
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccaca 204  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||    
T  13531917 tttatataaatagaaactcaaaccctaaatcatttcactcacaca 13531873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 13705361 - 13705441
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    ||||| || ||||||||| ||||||||||||||||| | ||| |||||| || |||||| || | ||||||||||||||||    
T  13705361 tgggtatgagttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccaccccgaacccatacc 13705441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 18485743 - 18485655
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||| ||| | |||| |||| |||||||| | ||||||||| ||||||||  || | |||| |||||||||||||    
T  18485743 tttgactgggtttgggttatcctcgattttaaaatacgggtacagtacgggtaacggggatatatgtacccaccctgaacccataccca 18485655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 43371640 - 43371560
Alignment:
Q  41 ggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||| ||||||||| |||| |||| |||||||||||||||||||| ||||||||  || | ||||| ||| ||||||||    
T  43371640 ggtttgagttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcataccca 43371560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 10208430 - 10208509
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| ||||||||||||||| | |||||||||||| |||||||||||  |  |||||| || | |||||||||||||||    
T  10208430 tgggtatgggttttccccaatcttaaaacacgggtatgggacgggtaatggatatataggtacctaccccgaacccatac 10208509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 34458833 - 34458880
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaa 86  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  34458833 tgggtttgggttttctccaatttcaaaacacgggtacggaacgagtaa 34458880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 3547251 - 3547177
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccata 117  Q
    ||||||||||  || ||||||||| |||||||||||||||||||| | ||||||  || | ||||||||||||||    
T  3547251 tttgggtttttaccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccaccccgaacccata 3547177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 7314648 - 7314730
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| |||| |||| ||| ||| |||||||||||| || |||||| |  | ||||||||||||||||||    
T  7314648 tgggtatgggttttccccgattttaaaatacgagtatgggacgggtaacgggtatataggttcccaccccgaacccataccca 7314730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 14331616 - 14331534
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| |||| |||| || |||| |||||||||||| ||||||||  || | || |||||||||||||||    
T  14331616 tgggtatgggttttcccctatttaaaaatacaggtatgggacgggtaacggggatatatgtacccactccgaacccataccca 14331534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 35409161 - 35409207
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacggga 79  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||    
T  35409161 tttgactgggtttgggttttccccgatttcaaaacactagtacggga 35409207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 37999572 - 37999490
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| | |||||||||| || |||||  || | ||||||||| ||||||||    
T  37999572 tgggtatgggttttccccgatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcataccca 37999490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 45115638 - 45115569
Alignment:
Q  48 gttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccata 117  Q
    ||||||| | ||||||||||||||||| | ||||||||||||| |||||| || | | ||||||||||||    
T  45115638 gttttcctcgatttcaaaacacgggtatgagacgggtaacaggtatataggtacccatcccgaacccata 45115569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 4961479 - 4961567
Alignment:
Q  67 cacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattac 155  Q
    |||||||| |||||| ||||||||||||||| ||   ||| |||||||||||||| |||||| | ||||  ||||||| || |||||||    
T  4961479 cacgggtatgggacgtgtaacagggatataggtacacacctcgaacccatacccaaactcgtcccgaatatagaaaatgaatttattac 4961567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 29656876 - 29656948
Alignment:
Q  180 aaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcac-ttatcatagttctct 251  Q
    ||||||||||||||| |||| |||||||| |||||| |||||||||| |||| | || |||||||| ||||||    
T  29656876 aaccctaaatcatttgactcacacagtcaaagtctcagtctttcagatgacactgactttatcataattctct 29656948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 37472769 - 37472840
Alignment:
Q  49 ttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    |||||||| ||||||||||||||||| |||||||||||| || || ||| || | ||  |||||||||||||    
T  37472769 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatttaggtacccacttcgaacccataccc 37472840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 40359332 - 40359257
Alignment:
Q  140 aaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctc 215  Q
    |||||||| |||||||  | ||||| ||||||||||||||||  ||||||||||||| || | |||| ||||||||    
T  40359332 aaaatcaatttattacatcttttatataaatagaaactcaaagtctaaatcatttcagtcacgcagttagagtctc 40359257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 4428013 - 4427931
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||| | |||| || ||||||| |||||||| ||| | ||||||   ||| ||| ||||||||||||||    
T  4428013 tgggtttgggttttccccgacttcataatacgggtaagggacgggcaacggtgatatatggatccacctcgaacccataccca 4427931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 10212492 - 10212447
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaac 87  Q
    ||||||||||||||| ||||| |||||||| |||||||| ||||||    
T  10212492 gtttgggttttccccgatttccaaacacggttacgggacaggtaac 10212447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 35510446 - 35510515
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaa 111  Q
    |||||||||||||||||||||||||||| | |||  |||||||||   |||||||| |||| ||| ||||    
T  35510446 gtttgggttttccccaatttcaaaacacagatacaagacgggtaatgaggatataggtatccacctcgaa 35510515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 30979011 - 30978934
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||| ||| ||||||||| ||||||||||   || ||||  |||||||  |||| ||||||||||||||||||    
T  30979011 gtttgggtttttcccgatttcaaaatacgggtacgg--aggataacgaggatatatgtatccaccccgaacccataccca 30978934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 44057969 - 44057889
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcga-ccccgaacccataccca 121  Q
    |||||| |||||||  ||||||||| || ||||||||||||||||  ||||||||  || | | |||||||||||||||||    
T  44057969 gtttggattttccctgatttcaaaataccggtacgggacgggtaatggggatatatgtacccacccccgaacccataccca 44057889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 256
Target Start/End: Complemental strand, 3157176 - 3156959
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    ||||||| |||||||||| ||||||||| | ||||| ||||||| |||| ||||||||| || | || ||||||| ||||||| || ||| |  ||   |    
T  3157176 tgggtttaggttttccccgatttcaaaatatgggtatgggacggataacggggatataggtacccacaccgaacctatacccaaacccgtcccaaacata 3157077  T
Q  139 gaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactt 238  Q
    ||||||||| |||||||  |   ||| ||||||||||| |||| |||||||| |||||||| |  ||||||||||| ||||||| ||| |||| ||||||    
T  3157076 gaaaatcaatttattacccctactatataaatagaaacccaaatcctaaatcctttcactcgcgtagtcagagtcttggtcttttagatgacactcactt 3156977  T
Q  239 atcatagttctctatttt 256  Q
    || |||||||||| ||||    
T  3156976 attatagttctctctttt 3156959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 3920637 - 3920549
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||| |||||| || | ||||||||||||||||||    
T  3920637 tttgactgggtttgggttttccccgatttcaaaacactggtatgggacggataacaggtatataggtacccaccccgaacccataccca 3920549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 23475236 - 23475475
Alignment:
Q  13 aatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaa 111  Q
    |||||||||| ||||||  |||||||||||||||||||||| ||| ||||||||||||||||  |||| ||||||  ||||||||  || | ||  ||||    
T  23475236 aatttgacgggttttccccgctttgactgggtttgggtttttcccgatttcaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaa 23475335  T
Q  112 cccatacccagactcgttctgaatg-cagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcaga 210  Q
    |||||||||| || ||| | |||||  | |||||||| ||| |||    ||| | |||||| |||| ||||| |||||||||||||||| || |||||||    
T  23475336 cccatacccaaacccgtcccgaatgtaaaaaaatcaatttactacccgttttgtataaataaaaacccaaactctaaatcatttcactcacatagtcaga 23475435  T
Q  211 gtctcggtctttcagacgacattcacttatcatagttctc 250  Q
    ||| | || ||||||| |||| ||| |||| | |||||||    
T  23475436 gtcccagtgtttcagatgacactcatttattacagttctc 23475475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 18684067 - 18683985
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||  |||| ||| ||||||||||||||    
T  18684067 tgggttcgggttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacctcgaacccataccca 18683985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 26004468 - 26004554
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    |||||||||||||||||||||| | ||||||||||  ||||| ||||||||||||||| ||||||||| | ||||||||||||||||    
T  26004468 tttgactgggtttgggttttcctcgatttcaaaacttgggtatgggacgggtaacaggtatatagatacccaccccgaacccatacc 26004554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 4101634 - 4101470
Alignment:
Q  40 gggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcag 139  Q
    |||||||||||||||   |||||||||||| ||||| ||| |||| |||||||||||  || | | || ||||||||||||  || ||| |||||||  |    
T  4101634 gggtttgggttttccatgatttcaaaacacaggtacaggatgggttacagggatatatgtacccatcctgaacccataccctaacccgtcctgaatgttg 4101535  T
Q  140 aaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccaca 204  Q
    |||||||| |||||||    ||||| |||||| ||||||||||||| ||||||||||||| ||||    
T  4101534 aaaatcaatttattaccaattttatttaaataaaaactcaaacccttaatcatttcactcacaca 4101470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 10995837 - 10995925
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||| |||| ||| | |||||||||||||||||| || |||||    
T  10995837 gtttgggttttccccgatttcaagacacgggtatgggacgggtaacagggttatatatacccaccccgaacccatacccatacccgttc 10995925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 3226946 - 3227025
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||||| || | |||||||||||||||    
T  3226946 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatac 3227025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 251
Target Start/End: Complemental strand, 37218079 - 37217885
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacaggg-atatagatatcgaccccgaacccataccc-agactcgttctgaatgcagaaaatcaacttattac 155  Q
    |||||||||||| ||||||||||||||||| ||| |||||  || | | ||||||| ||||||| | || ||| ||||||  |||||||||| ||||||     
T  37218079 atttcaaaacacaggtacgggacgggtaacgggggatataagtaccaagcccgaactcataccccaaacccgtcctgaatatagaaaatcaa-ttattat 37217981  T
Q  156 tgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
      | ||| | |||||||||||||||  |||||||||||| |||  |||| ||||||||||||| ||||| | |||| |||| ||||||||||||||    
T  37217980 ctcttttgtataaatagaaactcaatgcctaaatcattttactaacacaatcagagtctcggtttttcatatgacactcacatatcatagttctct 37217885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 18825872 - 18825954
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||| || | ||||||||||| ||||||    
T  18825872 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtaccca 18825954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 11472811 - 11472924
Alignment:
Q  138 agaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcact 237  Q
    |||||||||| ||||||   | ||||| |||||||||||  ||||||||||||||||||||| |  ||| |||||||| |||||| ||| |||| |||||    
T  11472811 agaaaatcaatttattataccttttatataaatagaaaccaaaaccctaaatcatttcactcacgtagttagagtctcagtcttttagatgacactcact 11472910  T
Q  238 tatcatagttctct 251  Q
    ||||||||||||||    
T  11472911 tatcatagttctct 11472924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 251
Target Start/End: Original strand, 23533598 - 23533817
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    |||||||||||||||||||||||| |||| |||| ||||||| | || ||||||  ||||||||  || | ||  |||||||||||||| |||||| | |    
T  23533598 tttgactgggtttgggttttccccgatttgaaaatacgggtatgcgatgggtaat-gggatatatgtacccacttcgaacccatacccaaactcgtcccg 23533696  T
Q  133 aatgcagaaaa-tcaacttatta-ctgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgac 230  Q
    |||| | |||| |||| ||| || |  | ||| | ||| ||||||| ||||| |||||||||||||||| || |||||||||||| || ||||||| |||    
T  23533697 aatgtaaaaaaatcaatttactaaccccttttgtataattagaaacccaaactctaaatcatttcactcacatagtcagagtctcagtgtttcagatgac 23533796  T
Q  231 attcacttatcatagttctct 251  Q
    | ||| |||| | ||||||||    
T  23533797 actcatttattacagttctct 23533817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 31345498 - 31345398
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctctattttctt 259  Q
    ||||| ||||||||||||||||| ||| |||||||||||| |||| ||| |||||| ||| || ||| |||| |||||||||||| |||||| |||||||    
T  31345498 tttatataaatagaaactcaaactctatatcatttcactcacacaatcaaagtctcagtcatttagatgacactcacttatcataattctctcttttctt 31345399  T
Q  260 c 260  Q
    |    
T  31345398 c 31345398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 19439973 - 19440212
Alignment:
Q  3 aaccaaccctaatttgacgg-ttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatat 101  Q
    |||||| || |||||||||| ||||||  |||||||||||||||| ||||||||  |||| |||||||||||  |||| ||||||  ||||||||  ||     
T  19439973 aaccaaacccaatttgacgggttttccccgctttgactgggtttgagttttccctgatttgaaaacacgggtttgggatgggtaatggggatatatgtac 19440072  T
Q  102 cgaccccgaacccatacccagactcgttctgaatg-cagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcc 200  Q
    | ||  |||||||||||||| || ||| | |||||  | |||||||| |||  ||  | ||  | ||||||||||| ||||| ||||||||||||||||     
T  19440073 ccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaatttaccacccctttggtataaatagaaacccaaactctaaatcatttcactca 19440172  T
Q  201 cacagtcagagtctcggtctttcagacgacattcacttat 240  Q
    || |||||||||||| || || |||| |||| ||| ||||    
T  19440173 catagtcagagtctcagtgttccagatgacactcatttat 19440212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 26623050 - 26622939
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    ||||| |||||||||||||||||  ||||||||||||||||| |||| ||||||  || |||||  || | |||||||||||||||||| |||||||  |    
T  26623050 tttgagtgggtttgggttttccctgatttcaaaacacgggtatgggatgggtaatgggtatataagtacccaccccgaacccatacccaaactcgtttcg 26622951  T
Q  133 aatgcagaaaat 144  Q
    |||||| |||||    
T  26622950 aatgcaaaaaat 26622939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 10072559 - 10072477
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| ||||||||||||||||| || ||||||||| || |||||| || | ||||||||||||||||||    
T  10072559 tgggtatgggttttccccgatttcaaaacacgggtatggaacgggtaacgggtatataggtacccaccccgaacccataccca 10072477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 30650724 - 30650642
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || |||||||||||| |||||||||||||| |||||||||||| || |||||| || | ||||||||||||||||||    
T  30650724 tgggtatgagttttccccaatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 30650642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 27850326 - 27850431
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||| ||  ||||| || | | |||||||||||||||| || ||| | ||||| |    
T  27850326 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaaacccgtcccgaatgta 27850425  T
Q  139 gaaaat 144  Q
    ||||||    
T  27850426 gaaaat 27850431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 29292797 - 29292566
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatat--cgaccccgaacccatacccagactcgttctgaatg 136  Q
    ||||| ||| |||||||| ||||||||||||||||||| || |||||||| |||||||| ||   | ||||  |||||||||| | ||||||   |||||    
T  29292797 tgggtatggattttccccgatttcaaaacacgggtacgagatgggtaacatggatataggtacgcccaccctaaacccatacctaaactcgtctcgaatg 29292698  T
Q  137 cagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcc----------cacagtcagagtctcggtctttcaga 226  Q
     |||||||||| ||| |||  | ||||| |||| |||||  |||||||||||| ||||||||            || ||||||||||||||||||| |||    
T  29292697 tagaaaatcaatttactaccccttttatataaagagaaatccaaaccctaaattatttcactaaatttcactaacatagtcagagtctcggtcttttaga 29292598  T
Q  227 cgacattcacttatcatagttctctattttct 258  Q
     |||| ||||||||||||| ||||| ||||||    
T  29292597 tgacaatcacttatcatagctctcttttttct 29292566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 2630574 - 2630677
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    |||||||||||||||||| |||| |||||| ||||| ||||||||| || || ||||||||| | |||||||||||||||||| || ||| | |||||||    
T  2630574 tgggtttgggttttccccgattt-aaaacatgggtatgggacgggtgacgggtatatagatacccaccccgaacccatacccaaacccgtcccgaatgca 2630672  T
Q  139 gaaaa 143  Q
     ||||    
T  2630673 aaaaa 2630677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 3774162 - 3773943
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    |||||||| ||||||||||| || | || | ||| ||| ||||||||||  |||||||| || | |||| |||||||||| || |  ||| | ||||  |    
T  3774162 tgggtttgagttttccccaactttataaaatgggcacgagacgggtaacgaggatataggtacccaccctgaacccatactcaaatccgtcccgaattta 3774063  T
Q  139 gaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcactt 238  Q
    ||||||||| |||||||  | ||||| ||| ||| ||| ||||| | ||||||||| |||| |||||||||||| || | |||||| | ||||  || ||    
T  3774062 gaaaatcaatttattaccccttttatataattaggaacccaaacgcaaaatcattttactcacacagtcagagtttcagactttcatatgacacccattt 3773963  T
Q  239 atcatagttctctattttct 258  Q
    ||||||||||| | ||||||    
T  3773962 atcatagttctatcttttct 3773943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 5377175 - 5377096
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||  || |||||| || | ||||||||||||||||||    
T  5377175 gtttgggttttccccgatttcaaaacacaggtatgggacgggtaaagggtatataggtacccaccccgaacccataccca 5377096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 12980470 - 12980388
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||||||  || |||||  || | ||||||||||||||||||    
T  12980470 tgggttttggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccataccca 12980388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 16866262 - 16866180
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| |||||| ||||| || |||||| || | ||||||||||||||||||    
T  16866262 tgggtatgggttttccccgatctcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccataccca 16866180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 32546285 - 32546203
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||| |||| ||| ||||||||| |||||||||| ||||||||| ||||||||  || | ||||||||||||||||||    
T  32546285 tgggtttggatttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaacccataccca 32546203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28309624 - 28309503
Alignment:
Q  1 caaaccaaccctaatttgacg-gttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagat 99  Q
    |||||||||||  |||||| | |||||||  | |||| || |||||||||| ||||  ||||||||| |||||||||||||||||||| || |||||  |    
T  28309624 caaaccaaccccgatttgatgagttttcctcgatttgtctaggtttgggttctccctgatttcaaaatacgggtacgggacgggtaacgggaatatatgt 28309525  T
Q  100 atcgaccccgaacccataccca 121  Q
    ||| ||||||||| ||||||||    
T  28309524 atctaccccgaactcataccca 28309503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 45380200 - 45380111
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    ||||| |||||||| ||| ||||||||| ||||||| |||||||||||| || |||||| || | |||||||||||||||| | ||||||    
T  45380200 tgggtatgggtttttcccgatttcaaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacctaaactcgt 45380111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 6557854 - 6557938
Alignment:
Q  167 aaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctct 251  Q
    |||||||| ||||||| |||||||||||||||| |||| ||| |||||| |||||||||| |||| |||||| ||  ||||||||    
T  6557854 aaatagaatctcaaactctaaatcatttcactcacacaatcaaagtctcagtctttcagatgacactcacttctctaagttctct 6557938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 10990861 - 10990929
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccc 107  Q
    |||||| || |||||||| ||||||||| ||||||||||||||||||| |||||||||| |||| ||||    
T  10990861 tgggttgggtttttccccgatttcaaaatacgggtacgggacgggtaatagggatataggtatccaccc 10990929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 31426099 - 31426019
Alignment:
Q  41 ggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||| |||| |||| ||||||| | |||||||||| ||||||||  |||| ||||||||| ||||||||    
T  31426099 ggtttgggttttccccgatttaaaaatacgggtatgagacgggtaacggggatatatgtatccaccccgaacgcataccca 31426019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 45885765 - 45885845
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    ||||| || ||||||||| || |||||||||||||| ||||||||||||| | |||||| || | ||||||||||||||||    
T  45885765 tgggtatgagttttccccgatctcaaaacacgggtatgggacgggtaacaagtatataggtacccaccccgaacccatacc 45885845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 21702746 - 21702671
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    |||||||||||| || || ||||||||||| |||||||||||| || |||||| || | |||||||||||||||||    
T  21702746 tgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccc 21702671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 41103749 - 41103670
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||| |||| || |||||  || | |||||||||||||||    
T  41103749 tgggtatgggttttccccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaacccatac 41103670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 16079103 - 16079001
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    |||||||||||| || || |||||||||||||| |||||||||||| || |||||| |  | ||||| |||| ||||||| ||||||  ||||| |||||    
T  16079103 gtttgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtgcccaccccaaacctatacccaaactcgtcatgaatacagaa 16079004  T
Q  142 aat 144  Q
    |||    
T  16079003 aat 16079001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 17885558 - 17885476
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| |||| |||||| ||||| |||||||||||| || |||||| |  | ||||||||||||||||||    
T  17885558 tgggtatgggttttccccgattttaaaacatgggtatgggacgggtaacgggtatataggttccaaccccgaacccataccca 17885476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 22973481 - 22973399
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||  |||||||   || | ||| ||||||||||||||    
T  22973481 tgggtttgggttttccacgatttcaaaatacgggtacgggacgggtaatggggatatctgtacccacctcgaacccataccca 22973399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 35074563 - 35074481
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || | |||||||||||| |||||||||||| || |||||| || | | ||||||||||||||||    
T  35074563 tgggtatgggttttccccgatcttaaaacacgggtatgggacgggtaacgggtatataggtacccaacccgaacccataccca 35074481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 42908044 - 42908098
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatata 96  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||    
T  42908044 gtttgggttttccccgatttcaaaatacgggtacgggacgggtaatggggatata 42908098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 5432007 - 5432059
Alignment:
Q  30 tgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgg 82  Q
    ||||||||||| |||||| | |||| |||||||||||||||||||||||||||    
T  5432007 tgctttgactgagtttggatattcctcaatttcaaaacacgggtacgggacgg 5432059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 39456021 - 39456089
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacc 113  Q
    |||||||||||| ||||||||||| ||||| |||||||||||| || |||||| || | ||||||||||    
T  39456021 tgggttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataggtacccaccccgaacc 39456089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 33841167 - 33841092
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||| || ||||  ||   |||||||||||||||    
T  33841167 tttgagttttccccgatttcaaaacacgggtatgggacgggtaacatggttatatgtactcaccccgaacccatac 33841092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 38139792 - 38139839
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaa 86  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  38139792 tgggtatgggttttccccaatttcaaaacacgagtatgggacgggtaa 38139839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 224
Target Start/End: Original strand, 43550411 - 43550600
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctg 132  Q
    ||||| |||||||| |||||||||  ||| ||||||| | |||| ||| ||||| |||||||||  ||   |||| |||| ||||| || || ||| |||    
T  43550411 tttgattgggtttgagttttccccgtttttaaaacacagatacgagactggtaatagggatatatgtactcaccc-gaactcatacacaaacccgtcctg 43550509  T
Q  133 aatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttca 224  Q
    ||||  |||| || | |||||||  | | ||| ||||||||||| ||||||||||||||||||||| | |  ||||||||||| ||||||||    
T  43550510 aatgtggaaagtctatttattaccccttctatataaatagaaacccaaaccctaaatcatttcact-caaatgtcagagtctcagtctttca 43550600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 44845135 - 44845214
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    |||||||||||||||||| |||||| || ||||||||||||||| |||   |||||||  || | |||||||||||||||    
T  44845135 tgggtttgggttttccccgatttcataatacgggtacgggacggttaatgaggatatatttacccaccccgaacccatac 44845214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 7780101 - 7780019
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| ||||||| |||  || |||||| || | |||||||||| |||||||    
T  7780101 tgggtatgggttttccccgatctcaaaacacgggtatgggacggataatgggtatataggtacccaccccgaacctataccca 7780019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 25905721 - 25905640
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||||||||||||||| ||||||||| |||| |||||||||||| || | |||| || | ||||||||| ||||||||    
T  25905721 tgggtatgggttttccccaatctcaaaacacaggtatgggacgggtaacgggtacataggta-ccaccccgaactcataccca 25905640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 27896475 - 27896557
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||  ||||||||||| ||||| |||||||||||| ||| ||||   | | ||||||||| ||||||||    
T  27896475 tgggtttgggttttcccttatttcaaaacatgggtatgggacgggtaacggggttatatgcaccaaccccgaactcataccca 27896557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 42006005 - 42005952
Alignment:
Q  31 gctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggt 84  Q
    ||||||| || ||||||||||||| ||||||||||||||| ||| |||||||||    
T  42006005 gctttgattgagtttgggttttcctcaatttcaaaacacgtgtatgggacgggt 42005952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 16811828 - 16811741
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||| |||||| |||||||| || |||||||||||||| | ||||| |||  || ||||||||| | | ||||||||||||||||    
T  16811828 tttgactgagtttggattttccccgatctcaaaacacgggtatgagacggataatgggtatatagataccca-cccgaacccataccca 16811741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 18125234 - 18125310
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||| ||| || || ||||||||||| |||||||||||| || |||||| || | ||||||||| ||||||||    
T  18125234 tgggtttttcccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacgcataccca 18125310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 38152980 - 38152900
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    ||||| |||||||||||| ||||||||||| ||||| || |||| |||| |  |||||| || | ||||||||||||||||    
T  38152980 tgggtatgggttttccccgatttcaaaacatgggtatggaacggataacggctatataggtacccaccccgaacccatacc 38152900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 43507532 - 43507449
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    |||||||||||| ||||||||||| ||||| | |||||||||| || ||||||  | | |||| ||||||||||| | ||||||    
T  43507532 tgggttttccccgatttcaaaacatgggtatgagacgggtaacgggtatataggcacccaccctgaacccatacctatactcgt 43507449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 43218376 - 43218294
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||||||||||||| || |  ||| ||||||||||||| | ||||||  ||   ||||||||| ||||||||    
T  43218376 tgggtttgggttttccccaatttcataatataggtgcgggacgggtaacggcgatatatgtactcaccccgaactcataccca 43218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 45708871 - 45708945
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    ||||||||| || || ||||||||||||||  ||||||||||| || |||||| || | ||||||||| ||||||    
T  45708871 tgggttttctccgatctcaaaacacgggtattggacgggtaacgggtatataggtacccaccccgaactcatacc 45708945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 27063419 - 27063346
Alignment:
Q  47 ggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccc 120  Q
    |||||||||| |||| | || |||||||||||||||||||| || |||||  || | ||||||||| |||||||    
T  27063419 ggttttccccgatttaataatacgggtacgggacgggtaacgggaatatatgtacccaccccgaactcataccc 27063346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 24425479 - 24425415
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    ||||| ||||||||  ||||| |  ||||||||||||||||| |||||||||||| || ||||||    
T  24425479 tttgattgggtttgaattttctctgatttcaaaacacgggtatgggacgggtaacgggtatatag 24425415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 44734376 - 44734436
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||||||||||||||| ||||| |||||  || |||||| || | |||||||||||||||    
T  44734376 atttcaaaacacgggtatgggaccggtaatgggtatataggtacccaccccgaacccatac 44734436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 45380248 - 45380204
Alignment:
Q  3 aaccaaccctaatttgacggttttccgtgctttgactgggtttgg 47  Q
    |||||| || |||||||||||||||| || |||||||||||||||    
T  45380248 aaccaaacccaatttgacggttttccctgttttgactgggtttgg 45380204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 33481 - 33377
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||  || | |||||||||||||||||| |||||| | |||||||    
T  33481 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaactcgtcccgaatgca 33382  T
Q  139 gaaaa 143  Q
    |||||    
T  33381 gaaaa 33377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 251
Target Start/End: Complemental strand, 27252649 - 27252443
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| |||||| ||||||||||| || ||||||||||||| |||||| ||||||| || | |    ||||||||||||| ||||   ||||||| ||||    
T  27252649 gtttgagttttctccaatttcaaa-catgggtacgggacggataacagtgatataggtacccatt--gaacccatacccaaactcaccctgaatgtagaa 27252553  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatc 241  Q
      |||| |||||||    ||||| |||||||||||  ||| | ||||||||||||||| |||||| ||||| || |||||||||| |||| |||||||||    
T  27252552 tttcaatttattacccattttatataaatagaaaccaaaatcataaatcatttcactcacacagttagagtatcagtctttcagatgacactcacttatc 27252453  T
Q  242 atagttctct 251  Q
     |||||||||    
T  27252452 ttagttctct 27252443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 30904835 - 30904988
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaatcaacttattactg 157  Q
    |||||||||||||||||||||||||||| | ||||||||| || | |||||||||||||||||| |  |||   ||||| || ||||||| ||| |||      
T  30904835 atttcaaaacacgggtacgggacgggta-cggggatataggtacccaccccgaacccatacccaaatccgtctcgaatgtaggaaatcaatttactaccc 30904933  T
Q  158 catttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagt 212  Q
    | ||||| ||||||||||| |||||||| |||||||||||||  | |||||||||    
T  30904934 cttttatataaatagaaacccaaacccttaatcatttcactcatatagtcagagt 30904988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 37032189 - 37032315
Alignment:
Q  130 ctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacga 229  Q
    ||||||| ||||||| || |||||||    ||||| |||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||    
T  37032189 ctgaatgtagaaaattaatttattacccattttatataaataaaaactcaaaccctaaatcatttcactcatacaatcagagtctcggtctttcagatga 37032288  T
Q  230 cattcacttatcatagttctctattttct 258  Q
    ||  || ||||||||||||| | ||||||    
T  37032289 ca--caattatcatagttctttcttttct 37032315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 4016044 - 4016148
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||| |||| || |||||| || | || ||||||||||||||| |||||| | |||||||    
T  4016044 tgggtttgggttttccccgatttcaaaacatgggtatgggacggataacgggtatataggtacccactccgaacccatacccaaactcgtcccgaatgca 4016143  T
Q  139 gaaaa 143  Q
    |||||    
T  4016144 gaaaa 4016148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 49025774 - 49025710
Alignment:
Q  33 tttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatag 97  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||    
T  49025774 tttgactgggtttgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatatag 49025710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 42758459 - 42758380
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||| |||| |||||||||||| |||| ||||||||||||||| |||||| |||  ||||||||||||||||||    
T  42758459 gtttgggtttcccccgatttcaaaacacaggtatgggacgggtaacaggtatataggtatgcaccccgaacccataccca 42758380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 30616281 - 30616363
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||  || |||| ||| | ||||||||||||||||||    
T  30616281 tgggtttgggttttccccgatttcaaaacacggatatgggacgggtaacgaggttatatataaccaccccgaacccataccca 30616363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 39655273 - 39655355
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| ||||||||||||||| |||||| || | ||||| ||||||||||||    
T  39655273 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaacccataccca 39655355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 23546942 - 23547031
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    ||||| |||||||||||| || || ||||||||||| |||||||||||| || |||||| || | |||||||||||||||||| ||||||    
T  23546942 tgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaactcgt 23547031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 44639362 - 44639271
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    ||||| |||||||||||  || |||||||||||||| |||||||||||| || |||||| || | |||||||||||||||||| || |||||    
T  44639362 tgggtatgggttttcccatatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgttc 44639271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 4557305 - 4557387
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||||||||||||||||  |||||||||| ||||| ||||||||||||  | |||||| || | ||||||||||||||||||    
T  4557305 tgggtttgggttttccccgttttcaaaacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccataccca 4557387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 44172714 - 44172632
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||  || | ||||||||||||||||||    
T  44172714 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccataccca 44172632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 44179414 - 44179332
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||  || | ||||||||||||||||||    
T  44179414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccataccca 44179332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 44252835 - 44252753
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| || || ||||||||||| |||||| |||||||| |||||| || | ||||||||||||||||||    
T  44252835 tgggtatgggttttccccgatctcgaaacacgggtatgggacgtgtaacaggtatataggtacccaccccgaacccataccca 44252753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 48390817 - 48390899
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||||| || |||||| || | | || |||||||||||||    
T  48390817 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggaatataggtacccatcctgaacccataccca 48390899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 1337152 - 1337076
Alignment:
Q  15 tttgacggttttccgtgctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacaggg 91  Q
    |||||||| |||||  | ||||||||||||||||||||| || ||||||||||| | ||| ||||||||||||||||    
T  1337152 tttgacggatttccccgttttgactgggtttgggttttcaccgatttcaaaacaagtgtatgggacgggtaacaggg 1337076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 52198243 - 52198152
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    ||||| |||||||| ||| || ||||||||| |||| |||||||||||| || |||||| || | |||||||||||||||||| || |||||    
T  52198243 tgggtatgggtttttcccgatctcaaaacacaggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgttc 52198152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 34026042 - 34025960
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||||||| |||||||||||| |||| ||||||||||||  | |||||| | || ||||||||| ||||||||    
T  34026042 tgggtatgggttttccccgatttcaaaacacaggtatgggacgggtaacgagtatataggtttccaccccgaactcataccca 34025960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 22535841 - 22535930
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    ||||| || |||||||||||||||||||||||| || |||||||||||| || ||| ||  | | ||||||||||||||| || ||||||    
T  22535841 tgggtatgagttttccccaatttcaaaacacggatatgggacgggtaacgggtatacaggcacccaccccgaacccatacacatactcgt 22535930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 53631992 - 53631903
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgt 128  Q
    |||||||| |||||||| ||||| |||||||| ||| | |||||||||| || |||||| || | ||||||||||||||| || ||||||    
T  53631992 tgggtttgagttttcccaaattttaaaacacgtgtatgagacgggtaacgggtatataggtacccaccccgaacccatactcaaactcgt 53631903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 7469778 - 7469857
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||||||  || || ||||||||||| |||||||||||| || |||||| || | |||||||||||||||    
T  7469778 tgggtatgggttttccctgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatac 7469857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 17146150 - 17146229
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| ||||||||  ||||| |||||||| ||||| || |||||||||||  |||||| |||| |||||||||||||||    
T  17146150 tgggtatgggttttttccaatctcaaaacatgggtatggaacgggtaacagttatataggtatccaccccgaacccatac 17146229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 34119741 - 34119662
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||||| ||| |||| |||||||||||| | ||||| ||||||| |||||| || | ||||||||||||||||||    
T  34119741 gtttgagtttttcccgattttaaaacacgggtatgagacggataacaggtatataggtacccaccccgaacccataccca 34119662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 44106800 - 44106871
Alignment:
Q  47 ggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||||||||||| | |||||||||||| |||||| ||||| |  |||||| |||| |||||||||||||||    
T  44106800 ggttttccccaatcttaaaacacgggtatgggacgcgtaacggatatataggtatctaccccgaacccatac 44106871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 44953435 - 44953514
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||||||| || |||||||||||||| |||||||||||| || |||||| ||   ||||||||| |||||    
T  44953435 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtactcaccccgaactcatac 44953514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 48305641 - 48305732
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    ||||| || ||||||||||||||||||||||||||| || ||| ||| | || |||||| || | |||||||||| ||||||| || |||||    
T  48305641 tgggtatgagttttccccaatttcaaaacacgggtatggaacgagtatcgggtatataggtacccaccccgaacctatacccaaacccgttc 48305732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 49580152 - 49580073
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||| |||||||||||| || |||||||||||||| ||||||||||||  | |||||| || | ||| |||||||||||    
T  49580152 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgagtatataggtacccacctcgaacccatac 49580073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 184
Target Start/End: Complemental strand, 4553275 - 4553134
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||| ||||| ||| ||||||||||| |||| ||| |||||||| ||||||||| |||   ||||||||||||||| || || |||   ||||| | ||    
T  4553275 gtttgagtttttcccgatttcaaaacatgggtgcggaacgggtaatagggatataaatacacaccccgaacccatactcaaacccgtctcgaatgtaaaa 4553176  T
Q  142 aatcaacttattactgcatttatgtaaatagaaactcaaaccc 184  Q
    |||||| |||||| |   ||||| |||||| ||||||||||||    
T  4553175 aatcaatttatta-tttttttatataaataaaaactcaaaccc 4553134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 10043282 - 10043364
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||   |||||||||| ||||| |||||||||||| ||| ||||   | | ||||||||||||||||||    
T  10043282 tgggtttgggttttccctggtttcaaaacatgggtatgggacgggtaacggggttatatgcacccaccccgaacccataccca 10043364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 23580915 - 23580833
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || ||||||||||||||||||||||| ||| |  ||||||||| || |||||| || | || |||||||||||||||    
T  23580915 tgggtatgagttttccccaatttcaaaacacgagtatgaaacgggtaacgggtatataggtacccactccgaacccataccca 23580833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 29284424 - 29284342
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| |||||||| ||| || || ||||||||||| |||||||||||| || |||||| || | | ||||||||||||||||    
T  29284424 tgggtatgggtttttcccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccagcccgaacccataccca 29284342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 34154502 - 34154420
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| || ||||||||| ||||||||||| ||||| |  |||||||||| | |||||| || | ||||||||||||||||||    
T  34154502 tgggtatgtgttttccccgatttcaaaacatgggtatgaaacgggtaacaagaatataggtacccaccccgaacccataccca 34154420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 34593113 - 34593034
Alignment:
Q  168 aatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttct 249  Q
    |||||||||||||||  ||||||||||||||  |||| | || |||||||||||||| |  ||| |||||||||||||||||    
T  34593113 aatagaaactcaaac--taaatcatttcacttacacaattagggtctcggtctttcacataacactcacttatcatagttct 34593034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 38347570 - 38347524
Alignment:
Q  169 atagaaactcaaaccctaaatcatttcactcccacagtcagagtctc 215  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||    
T  38347570 atagaaactcaaactctaaatcatttcactcatacagtcagagtctc 38347524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 26207250 - 26207164
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgacattcacttatcatagttctc 250  Q
    ||||| ||||| ||||| |||||||||||||||||||    |||||| ||||||||  ||||| ||| |||| |||||| |||||||||||    
T  26207250 tttatataaattgaaacccaaaccctaaatcatttca----cacagttagagtctccatcttttagatgacactcacttgtcatagttctc 26207164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 27937736 - 27937667
Alignment:
Q  130 ctgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactc 199  Q
    ||||||| || |||| || ||||||| || ||||| |||||||||||  |||||||||||||||||||||    
T  27937736 ctgaatgtaggaaattaatttattacagcttttatataaatagaaacctaaaccctaaatcatttcactc 27937667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 143
Target Start/End: Original strand, 31126826 - 31126899
Alignment:
Q  70 gggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaaaa 143  Q
    ||||| ||||||||||||| | |||||| |||| ||||||||| |||||||| |||||| |  |||||||||||    
T  31126826 gggtatgggacgggtaacatgtatataggtatccaccccgaactcatacccaaactcgtcccaaatgcagaaaa 31126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 54317229 - 54317150
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    ||||| ||||||||| ||||||||||||  |||  ||||||||||| || |||||| || | ||||||||||||| ||||    
T  54317229 gtttgagttttccccgatttcaaaacacaagtataggacgggtaacgggtatataggtacccaccccgaacccattccca 54317150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 9220333 - 9220387
Alignment:
Q  166 taaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtct 220  Q
    |||||| ||||||| ||||||||||||| |||||  |||||||||||||| ||||    
T  9220333 taaataaaaactcataccctaaatcattccactcatacagtcagagtctcagtct 9220387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 3385875 - 3385936
Alignment:
Q  58 atttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacc 119  Q
    ||||||||||||||||||||||| ||||||  |||||||| || | ||| |||| |||||||    
T  3385875 atttcaaaacacgggtacgggacaggtaacgaggatataggtagccaccacgaatccatacc 3385936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 29842389 - 29842317
Alignment:
Q  45 tgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||||||||| | ||| |||||||||||| ||||| |||||| || |||||| || | |||||||||||||||    
T  29842389 tgggttttcccgatttt-aaaacacgggtatgggactggtaacgggaatataggtacccaccccgaacccatac 29842317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 42243472 - 42243359
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgcagaa 141  Q
    ||||||||||| ||| ||||||| ||||||||| | || |||||||  |||||||  |||| ||||| ||  |||||||| || | | || |||| ||||    
T  42243472 gtttgggtttttcccgatttcaatacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacccaaacccatcctaaatgtagaa 42243373  T
Q  142 aatcaacttattac 155  Q
    |||||| |||||||    
T  42243372 aatcaatttattac 42243359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 211452 - 211365
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactc 126  Q
    ||||||||||||||| || ||||||||| ||||||||| |||||||||||||||||||  || | |||||||||||||||||| ||||    
T  211452 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactc 211365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 90685 - 90580
Alignment:
Q  39 tgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttctgaatgca 138  Q
    ||||| |||||||||||| ||||||||||||||||| | ||||| |||| || |||| | || |  |||||||||||||| || | |||| |||||||||    
T  90685 tgggtatgggttttccccgatttcaaaacacgggtatgagacggttaacgggtatattggtaccctccccgaacccatacacaaattcgtcctgaatgca 90586  T
Q  139 gaaaat 144  Q
    ||||||    
T  90585 gaaaat 90580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 3054 - 2978
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatac 118  Q
    ||||||||||||||| ||||||||| |||||||| |||||| |||| ||||||||  || | |||||||||||||||    
T  3054 gtttgggttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaacccatac 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 154
Target Start/End: Original strand, 20731 - 20854
Alignment:
Q  31 gctttgactgggtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccatacccagactcgttc 130  Q
    |||||||| | |||||| |||| ||| |||||||||| || ||| | |||||||||  |||||||| ||||| ||| ||||||||||| || || |||||    
T  20731 gctttgacagagtttggatttttcccgatttcaaaactcgagtatgagacgggtaatggggatataaatatccacctcgaacccatactcaaacccgttc 20830  T
Q  131 tgaatgcagaaaatcaacttatta 154  Q
     ||||| | |||||||| ||||||    
T  20831 cgaatgtaaaaaatcaatttatta 20854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 128124 - 128203
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||  ||||||||| || |||||||||||||||||||  ||||||||  || | ||||||||||||||||||    
T  128124 gtttgggttttttccaatttcataatacgggtacgggacgggtaatggggatatatgtacccaccccgaacccataccca 128203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 105498 - 105551
Alignment:
Q  68 acgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||||||||||||||  || | ||||||||||||||||||    
T  105498 acgggtacgggacgggtaacagggatatatgtacccaccccgaacccataccca 105551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 55902 - 55979
Alignment:
Q  43 tttgggttttccccaatttcaaaacacgggtacgggacgggtaacagggatatagatatcgaccccgaacccataccca 121  Q
    |||||||||||||||||||||||| | |||||| ||| ||||||||||||||||  || | |||||||| |||||||||    
T  55902 tttgggttttccccaatttcaaaatatgggtacagga-gggtaacagggatatatgtacccaccccgaatccataccca 55979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 1107 - 987
Alignment:
Q  131 tgaatgcagaaaatcaacttattactgcatttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcagacgac 230  Q
    |||||| ||||||| || |||||||    ||||| |||||||||||||||| | ||||||||||||||| |   |||| ||||||  ||||| ||| |||    
T  1107 tgaatgtagaaaattaatttattacccattttatataaatagaaactcaaatcttaaatcatttcactcacgtggtcaaagtctcattctttaagatgac 1008  T
Q  231 attcacttatcatagttctct 251  Q
    | |||||||||||| ||||||    
T  1007 aatcacttatcataattctct 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 14825 - 14759
Alignment:
Q  160 tttatgtaaatagaaactcaaaccctaaatcatttcactcccacagtcagagtctcggtctttcaga 226  Q
    ||||| |||||||||||| ||||  |||||||||||| || |||| ||| |||||| ||||||||||    
T  14825 tttatataaatagaaacttaaacattaaatcatttcattcgcacaatcaaagtctcagtctttcaga 14759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 14932 - 14900
Alignment:
Q  42 gtttgggttttccccaatttcaaaacacgggta 74  Q
    ||||||||||||||| |||||||||||||||||    
T  14932 gtttgggttttccccgatttcaaaacacgggta 14900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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