View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6429_low_34 (Length: 251)
Name: NF6429_low_34
Description: NF6429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6429_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 32437268 - 32437462
Alignment:
| Q |
1 |
acaatttcaaaatttcatgtcaataaccatatctttaattcttaatttcatccatcttgaattgaagaccatatttattttgagacgacatgagttggat |
100 |
Q |
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| T |
32437268 |
acaatttcaaaatttcatgccaataaccatatctttaattc-------cacccatcttgaattgaagaccatatttattttgagacgacatgagttggat |
32437360 |
T |
|
| Q |
101 |
taaagtaaatattgagataaaatagccaaaccttgtcattgaagtaacttcttttgtgtgctcacaaggtttattttacatgaaaaaagatacaagataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
32437361 |
taaagtaaatattgagataaaatagccaaaccttgtcattgaagtaacttcttttgtgtgctcacaaggtttattttacatgaaaaaacatacaagataa |
32437460 |
T |
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