View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6429_low_38 (Length: 245)
Name: NF6429_low_38
Description: NF6429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6429_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 45309501 - 45309729
Alignment:
| Q |
1 |
ctatgggtccgattggagccactgacaacgacgttttagtaacggttgccaaggatggcagtggtcaatataagactattgttgatgctattaatgcata |
100 |
Q |
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| T |
45309501 |
ctatgggtccgattggagccactgacaacgacgttttagtaacggttgccaaggatggcagtggtcaatataagactattgttgatgctattaatgcata |
45309600 |
T |
|
| Q |
101 |
cccaaataaccatcaaggaaggcacattatctacattaagagtggtgtatatgatgagtacatttttgttgacaaggataaaccaaatgttttcatgttt |
200 |
Q |
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|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45309601 |
cccaaataaccatcaaggaaggtacattatctacactaagagtggtgtatatgatgagtacatttttgttgacaaggataaaccaaatgttttcatgttt |
45309700 |
T |
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| Q |
201 |
ggtgatggccctacaaaaaccattatcac |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
45309701 |
ggtgatggccctacaaaaaccattatcac |
45309729 |
T |
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