View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6431_low_10 (Length: 327)

Name: NF6431_low_10
Description: NF6431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6431_low_10
NF6431_low_10
[»] chr2 (28 HSPs)
chr2 (1-312)||(43585732-43586043)
chr2 (7-72)||(12224250-12224315)
chr2 (1-72)||(2438686-2438757)
chr2 (1-72)||(5040755-5040826)
chr2 (1-82)||(24067771-24067852)
chr2 (1-70)||(37558998-37559067)
chr2 (1-68)||(15972894-15972961)
chr2 (1-72)||(18570993-18571064)
chr2 (28-98)||(14450708-14450778)
chr2 (28-98)||(17895824-17895894)
chr2 (28-73)||(24009343-24009388)
chr2 (1-33)||(13501084-13501116)
chr2 (1-45)||(19536391-19536435)
chr2 (1-73)||(20242693-20242765)
chr2 (28-72)||(37419802-37419846)
chr2 (2-37)||(14373429-14373464)
chr2 (1-68)||(18840984-18841051)
chr2 (1-60)||(30404829-30404888)
chr2 (17-72)||(38117126-38117181)
chr2 (7-45)||(21624294-21624332)
chr2 (1-31)||(24067274-24067304)
chr2 (6-60)||(28596495-28596549)
chr2 (6-72)||(34993949-34994015)
chr2 (1-42)||(31026716-31026757)
chr2 (28-73)||(36096330-36096375)
chr2 (50-86)||(8300188-8300224)
chr2 (1-37)||(14450797-14450833)
chr2 (1-45)||(18255974-18256018)
[»] chr7 (19 HSPs)
chr7 (1-94)||(25956466-25956558)
chr7 (1-94)||(5937366-5937459)
chr7 (1-72)||(21880173-21880244)
chr7 (1-39)||(1885594-1885632)
chr7 (1-96)||(48963995-48964100)
chr7 (2-98)||(22801671-22801778)
chr7 (1-59)||(25481923-25481981)
chr7 (8-69)||(21864836-21864897)
chr7 (1-38)||(36013799-36013836)
chr7 (1-44)||(2144533-2144577)
chr7 (9-65)||(7197271-7197327)
chr7 (1-69)||(15680830-15680898)
chr7 (1-73)||(39138465-39138537)
chr7 (9-72)||(598237-598300)
chr7 (1-72)||(8234167-8234238)
chr7 (1-38)||(7438727-7438764)
chr7 (1-38)||(17257990-17258027)
chr7 (1-72)||(5409798-5409874)
chr7 (28-72)||(24339701-24339745)
[»] chr4 (33 HSPs)
chr4 (1-96)||(13307898-13307993)
chr4 (1-98)||(37496725-37496833)
chr4 (1-86)||(44362687-44362772)
chr4 (1-72)||(23292953-23293024)
chr4 (1-67)||(12797310-12797376)
chr4 (1-73)||(49431047-49431119)
chr4 (1-44)||(13117450-13117493)
chr4 (7-60)||(16073421-16073474)
chr4 (1-69)||(29205465-29205533)
chr4 (31-98)||(10635053-10635120)
chr4 (1-60)||(21945524-21945583)
chr4 (1-72)||(28964215-28964286)
chr4 (17-72)||(34306771-34306826)
chr4 (49-96)||(39619045-39619092)
chr4 (1-98)||(5998838-5998934)
chr4 (1-54)||(54580008-54580061)
chr4 (1-37)||(11797630-11797666)
chr4 (1-45)||(42640550-42640594)
chr4 (1-72)||(8423685-8423756)
chr4 (1-32)||(10164861-10164892)
chr4 (1-60)||(56049897-56049956)
chr4 (1-72)||(715572-715645)
chr4 (1-72)||(752898-752971)
chr4 (1-39)||(22799893-22799931)
chr4 (1-39)||(30298968-30299006)
chr4 (1-39)||(30327836-30327874)
chr4 (28-73)||(5414127-5414172)
chr4 (1-45)||(6879459-6879503)
chr4 (1-44)||(13484044-13484088)
chr4 (50-98)||(13484078-13484126)
chr4 (28-72)||(30982834-30982878)
chr4 (1-69)||(40224468-40224536)
chr4 (1-37)||(47492400-47492436)
[»] chr6 (31 HSPs)
chr6 (1-95)||(26402624-26402718)
chr6 (5-93)||(1334686-1334774)
chr6 (1-72)||(28715316-28715387)
chr6 (13-98)||(32225331-32225416)
chr6 (1-72)||(28152119-28152190)
chr6 (1-68)||(34595155-34595222)
chr6 (1-43)||(6751878-6751920)
chr6 (24-98)||(26178527-26178601)
chr6 (1-98)||(19369838-19369923)
chr6 (28-98)||(785385-785455)
chr6 (2-39)||(785455-785492)
chr6 (6-69)||(32978869-32978932)
chr6 (1-45)||(426508-426552)
chr6 (1-44)||(7977825-7977868)
chr6 (1-72)||(17841556-17841627)
chr6 (1-60)||(33001268-33001327)
chr6 (6-72)||(4877969-4878034)
chr6 (1-31)||(10031591-10031621)
chr6 (1-35)||(10158005-10158039)
chr6 (34-72)||(17327617-17327655)
chr6 (1-46)||(6898274-6898319)
chr6 (1-46)||(7378000-7378045)
chr6 (8-69)||(13364675-13364736)
chr6 (8-45)||(16388211-16388248)
chr6 (28-73)||(16488545-16488590)
chr6 (12-69)||(23771610-23771667)
chr6 (2-92)||(7942277-7942373)
chr6 (28-72)||(8365475-8365519)
chr6 (28-72)||(10339081-10339125)
chr6 (28-72)||(16766756-16766800)
chr6 (10-54)||(30851630-30851674)
[»] chr3 (21 HSPs)
chr3 (1-98)||(34834869-34834965)
chr3 (1-72)||(10954973-10955044)
chr3 (1-68)||(14338454-14338521)
chr3 (1-72)||(20503486-20503557)
chr3 (1-72)||(55401096-55401167)
chr3 (1-72)||(28918022-28918095)
chr3 (1-70)||(35222959-35223028)
chr3 (1-72)||(40993302-40993373)
chr3 (8-72)||(7171529-7171593)
chr3 (4-51)||(23271982-23272029)
chr3 (6-45)||(25775535-25775574)
chr3 (4-39)||(49179715-49179750)
chr3 (1-39)||(44427862-44427900)
chr3 (1-82)||(6984785-6984865)
chr3 (28-73)||(13845491-13845536)
chr3 (6-54)||(3865700-3865748)
chr3 (28-72)||(4987247-4987291)
chr3 (28-72)||(14832158-14832202)
chr3 (1-45)||(16000010-16000054)
chr3 (28-72)||(41961606-41961650)
chr3 (26-98)||(54690304-54690376)
[»] chr8 (25 HSPs)
chr8 (1-78)||(42874543-42874620)
chr8 (235-309)||(4188994-4189068)
chr8 (1-73)||(26915201-26915278)
chr8 (28-98)||(10497746-10497816)
chr8 (1-95)||(34073922-34074016)
chr8 (1-54)||(20873090-20873143)
chr8 (24-72)||(5813636-5813684)
chr8 (1-72)||(40332212-40332283)
chr8 (1-46)||(4948673-4948718)
chr8 (1-38)||(31548294-31548331)
chr8 (28-73)||(34450987-34451032)
chr8 (1-33)||(31119108-31119140)
chr8 (5-69)||(44462165-44462229)
chr8 (5-69)||(44469698-44469762)
chr8 (1-72)||(36450721-36450792)
chr8 (1-39)||(5307081-5307119)
chr8 (1-39)||(10002163-10002201)
chr8 (1-43)||(18170478-18170520)
chr8 (1-43)||(18634046-18634088)
chr8 (1-38)||(24295138-24295175)
chr8 (1-54)||(26434201-26434254)
chr8 (1-38)||(27733868-27733905)
chr8 (1-69)||(3025572-3025640)
chr8 (1-73)||(20679361-20679433)
chr8 (1-45)||(24613541-24613585)
[»] chr5 (26 HSPs)
chr5 (1-72)||(21576712-21576783)
chr5 (4-98)||(7621171-7621270)
chr5 (1-72)||(21191023-21191094)
chr5 (6-76)||(11084325-11084395)
chr5 (1-44)||(19167571-19167614)
chr5 (1-72)||(27932256-27932327)
chr5 (1-42)||(8420048-8420089)
chr5 (1-46)||(15884009-15884054)
chr5 (1-45)||(6247643-6247687)
chr5 (4-44)||(16207586-16207626)
chr5 (1-37)||(30080503-30080539)
chr5 (1-72)||(31084344-31084420)
chr5 (1-44)||(2548408-2548451)
chr5 (63-98)||(9031879-9031914)
chr5 (28-71)||(21542089-21542132)
chr5 (1-72)||(42893381-42893452)
chr5 (1-72)||(43564902-43564973)
chr5 (1-43)||(10010575-10010617)
chr5 (1-43)||(24906297-24906339)
chr5 (7-73)||(30099004-30099070)
chr5 (1-38)||(10009847-10009884)
chr5 (1-38)||(21319946-21319983)
chr5 (28-73)||(21814320-21814365)
chr5 (28-72)||(21522809-21522853)
chr5 (28-72)||(21533375-21533419)
chr5 (3-39)||(32444789-32444825)
[»] scaffold0314 (1 HSPs)
scaffold0314 (1-95)||(8969-9061)
[»] chr1 (30 HSPs)
chr1 (1-72)||(1815278-1815349)
chr1 (1-72)||(18337350-18337421)
chr1 (1-72)||(51410046-51410117)
chr1 (1-66)||(19637789-19637854)
chr1 (1-46)||(38078654-38078699)
chr1 (8-72)||(46348350-46348414)
chr1 (1-45)||(50195459-50195503)
chr1 (4-51)||(7988439-7988486)
chr1 (1-72)||(40258900-40258971)
chr1 (10-72)||(37598861-37598923)
chr1 (1-46)||(17007954-17007999)
chr1 (1-42)||(31667446-31667487)
chr1 (1-69)||(29163351-29163419)
chr1 (28-72)||(32461420-32461464)
chr1 (1-63)||(17893886-17893949)
chr1 (6-45)||(19058850-19058889)
chr1 (1-72)||(22515854-22515925)
chr1 (1-72)||(42359416-42359487)
chr1 (7-45)||(24334699-24334737)
chr1 (1-39)||(24462270-24462308)
chr1 (1-39)||(26390133-26390171)
chr1 (7-40)||(7888122-7888155)
chr1 (1-46)||(22881609-22881654)
chr1 (28-73)||(25934675-25934720)
chr1 (1-38)||(28170402-28170439)
chr1 (1-72)||(1486671-1486747)
chr1 (1-37)||(14332429-14332465)
chr1 (34-86)||(14613061-14613113)
chr1 (28-72)||(40917808-40917852)
chr1 (1-45)||(41877464-41877508)
[»] scaffold0083 (1 HSPs)
scaffold0083 (6-60)||(45509-45563)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-68)||(433-500)
[»] scaffold0053 (1 HSPs)
scaffold0053 (17-72)||(8835-8890)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-60)||(70299-70358)
[»] scaffold0504 (1 HSPs)
scaffold0504 (50-98)||(8643-8691)
[»] scaffold0793 (1 HSPs)
scaffold0793 (1-72)||(4848-4921)
[»] scaffold0512 (1 HSPs)
scaffold0512 (17-59)||(5016-5058)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-72)||(14551-14619)
[»] scaffold0122 (1 HSPs)
scaffold0122 (33-86)||(10260-10313)
[»] scaffold0450 (1 HSPs)
scaffold0450 (28-72)||(8591-8635)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-72)||(241653-241697)


Alignment Details
Target: chr2 (Bit Score: 284; Significance: 1e-159; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 43586043 - 43585732
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacagaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||| |    
T  43586043 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcagacacatggacacaccttcaatcagaagtgttcgtgcaacagagg 43585944  T
Q  101 tccttttagagaaaaagttacatggtctgagggcaatagatctccattttattggggaggaacacaaatcacaaaagctacaaaacaacctcgatcaaat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  43585943 tccttttagagaaaaagttacatggtctgagggcaatagatctccagtttattggcgaggaacacaaatcacaaaagctacaaaacaacctcaatcaaat 43585844  T
Q  201 caaaaatcactagccaaaggtacatggtctgagggcatgaagacatagctatagatgacaccagccaaaccaccaccaataagaggtccaacccaataga 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43585843 caaaaatcactagccaaaggtacatggtctgagggcatgaagacatagctatagatgacaccagccaaaccaccaccaataagaggtccaacccaataga 43585744  T
Q  301 tccagttgttat 312  Q
    ||||||||||||    
T  43585743 tccagttgttat 43585732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 12224250 - 12224315
Alignment:
Q  7 cataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  12224250 cataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcct 12224315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 2438757 - 2438686
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||| || |||| ||||| |||||||||||    
T  2438757 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcct 2438686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5040755 - 5040826
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| ||| | |||||||||||    
T  5040755 aaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcct 5040826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24067771 - 24067852
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaa 82  Q
    ||||| ||||||| |||| ||||||||||||||||||| ||||||| ||||||| ||||  | |||| | ||||||||||||    
T  24067771 aaatgtcataattaaatgaaatcacaagtgtcggtgtcagacacgacacgtgtcagacattgagacatgacttcaatcagaa 24067852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37558998 - 37559067
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgc 70  Q
    |||| ||||||||||||||||| |||||||||||||||||||  || ||||||| ||||| || ||||||    
T  37558998 aaatcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccgacaccggtacacgc 37559067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15972894 - 15972961
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 68  Q
    |||| ||| |||||| |||||| ||||||||||||||||||||||| ||||||| ||| | |||||||    
T  15972894 aaattacacaattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacac 15972961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18570993 - 18571064
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||||||||||||||||||| | ||||| |||||| ||||||||| | || |||||  ||||||||||    
T  18570993 aaatgacataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccgacaccaggacacgcct 18571064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 14450778 - 14450708
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||| |||||| |||| || | ||||| ||||| |||||||| |||||||||||||||| |||||||||||    
T  14450778 gtgttggtgtcagacaggacatgtgtcagacaccgggacacgtcttcaatcagaagtgtccgtgcaacaga 14450708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 17895894 - 17895824
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||| ||||||| ||||||||||||||||| |   ||||||||||||||||| |||||| | |||||||||    
T  17895894 gtgttggtgtcgaacacgatacgtgtcggatattaggacacgccttcaatcaaaagtgtccatgcaacaga 17895824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 24009343 - 24009388
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  24009343 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctt 24009388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13501116 - 13501084
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcg 33  Q
    |||||||||||||||||||||||||||||||||    
T  13501116 aaatgacataattcaatgtaatcacaagtgtcg 13501084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19536435 - 19536391
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||    
T  19536435 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20242765 - 20242693
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    |||| |||||||||| |||||| | | ||||||||||||||||| | ||||||| |||||  |||||||||||    
T  20242765 aaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgcctt 20242693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 37419802 - 37419846
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcct 37419846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 14373464 - 14373429
Alignment:
Q  2 aatgacataattcaatgtaatcacaagtgtcggtgt 37  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14373464 aatgacataattcaatgtaatcacatgtgtcggtgt 14373429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18841051 - 18840984
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 68  Q
    |||| |||||||| | |||||| ||||||||||||||| ||||||| || |||| ||||| |||||||    
T  18841051 aaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacac 18840984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30404888 - 30404829
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 60  Q
    |||| |||||||||| |||||| ||||||||||| ||||||||||| || |||| |||||    
T  30404888 aaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacac 30404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 38117181 - 38117126
Alignment:
Q  17 tgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||| |||||||| |||||||||||| | ||||||| ||||| |||||||||||    
T  38117181 tgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcct 38117126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 21624294 - 21624332
Alignment:
Q  7 cataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcggacacg 21624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 24067274 - 24067304
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgt 31  Q
    |||||||||||||||||||||||||||||||    
T  24067274 aaatgacataattcaatgtaatcacaagtgt 24067304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 28596495 - 28596549
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 60  Q
    |||||| ||| |||||| | ||||||||||||||||||||| ||||||| |||||    
T  28596495 acataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacac 28596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 34994015 - 34993949
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||||| | | ||||| |||||| |||||| | ||||| ||||| |||||||||||    
T  34994015 acataattcaatgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcct 34993949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31026716 - 31026757
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggac 42  Q
    |||||||||||||||||||||||| |  ||||||||||||||    
T  31026716 aaatgacataattcaatgtaatcatatatgtcggtgtcggac 31026757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 36096375 - 36096330
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    |||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  36096375 gtgtcgatgtcggacacgacacgtgtctgacacggggacacgcctt 36096330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 8300224 - 8300188
Alignment:
Q  50 gtgtcggacacagggacacgccttcaatcagaagtgt 86  Q
    |||| |||||| |||||||||||||||||||||||||    
T  8300224 gtgttggacaccgggacacgccttcaatcagaagtgt 8300188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14450833 - 14450797
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgt 37  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  14450833 aaatcacataattcaatgtaatcacaagtgtcagtgt 14450797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18256018 - 18255974
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||| |||||||| | ||||||||||||||||||||    
T  18256018 aaatcacataatttaatgtaattagaagtgtcggtgtcggacacg 18255974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25956466 - 25956558
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaa 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||    
T  25956466 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacatgtcggacac-gggacacgccttcaatcagaagtgtccgtgcaa 25956558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5937459 - 5937366
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaa 94  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||  | | |||||||||||  ||||||| |||||||    
T  5937459 aaatgacataattcaatgtaatcacaagtgtctgtgtcggtcacgatacatgtcggacaccagaatacgccttcaatatgaagtgtccgtgcaa 5937366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21880173 - 21880244
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||| || |||| |||||  ||||||||||    
T  21880173 aaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcct 21880244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1885594 - 1885632
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1885594 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 1885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48964100 - 48963995
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg----------gacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgt 90  Q
    ||||||||||||||||| ||||||||||||| |||||||          |||||||||||||||| |||| ||||||  ||||||||||||||||| | |    
T  48964100 aaatgacataattcaatttaatcacaagtgttggtgtcgtgtaagtgtggacacgatacgtgtcgaacaccgggacataccttcaatcagaagtgtccat 48964001  T
Q  91 gcaaca 96  Q
    ||||||    
T  48964000 gcaaca 48963995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 22801778 - 22801671
Alignment:
Q  2 aatgacataattcaatgtaatcacaagtgtcg-----------gtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgt 90  Q
    |||||||||||||| |||||||||||||||||           ||||| ||||| | || |||||||||| |||||||||||||||||||||||| | ||    
T  22801778 aatgacataattcactgtaatcacaagtgtcggtgtattgtcagtgtctgacaccacacttgtcggacactgggacacgccttcaatcagaagtgctggt 22801679  T
Q  91 gcaacaga 98  Q
    ||||||||    
T  22801678 gcaacaga 22801671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25481923 - 25481981
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggaca 59  Q
    |||| |||||||||| |||||| |||||||| |||||||||||||||| ||||| ||||    
T  25481923 aaatcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtccgaca 25481981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 21864836 - 21864897
Alignment:
Q  8 ataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||||| | |||||| |||||||||| |||||||||||| ||||||| ||||| ||||||||    
T  21864836 ataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacg 21864897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36013836 - 36013799
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  36013836 aaatgacataattcaatgtaatcacacgtgtcggtgtc 36013799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2144577 - 2144533
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtc-ggtgtcggacac 44  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||    
T  2144577 aaatgacataattcaatgtaatcacacgtgtcaggtgtcggacac 2144533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 7197327 - 7197271
Alignment:
Q  9 taattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacaggga 65  Q
    |||||||||||||| ||||||||||||||||||||| | || |||| ||||| ||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggacacaacacatgtccgacaccggga 7197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15680830 - 15680898
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||| |||||||| | |||||| | ||||||||||||||||||||| ||||||| ||||| | ||||||    
T  15680830 aaatcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacg 15680898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39138465 - 39138537
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    |||| |||||||||| |||||| | |  ||||||||||||||||||||| ||||  |||| ||||||||||||    
T  39138465 aaatcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacacgcctt 39138537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 598237 - 598300
Alignment:
Q  9 taattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||| ||||||||   ||||||||||||| ||||||| ||||||| ||||| |||||||||||    
T  598237 taattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcct 598300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8234167 - 8234238
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||| | ||||||| ||||||||||||||| || |||| ||||| | |||||||||    
T  8234167 aaataacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcct 8234238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7438727 - 7438764
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  7438727 aaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17258027 - 17257990
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  17258027 aaataacataattcaatgtaatcataagtgtcggtgtc 17257990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 5409874 - 5409798
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg-----gacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| || ||| ||||||||||||||||     ||||||| ||||||| ||||| |||||||||||    
T  5409874 aaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcct 5409798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 24339701 - 24339745
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||||||| |||| || ||||| |||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcct 24339745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13307898 - 13307993
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaaca 96  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||   |||| ||||||||||||||||||| ||||||||    
T  13307898 aaatgacataattcaatgtaatcacaagtgttggtgtcggacacgacacgtgtcagacaccatgacatgccttcaatcagaagtgttggtgcaaca 13307993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 37496725 - 37496833
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgt-----------cggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcg 89  Q
    |||||||||||||||||||||||||||||||||||||           ||||||||| || |||||||||| |||||||||||||||||| |||||| ||    
T  37496725 aaatgacataattcaatgtaatcacaagtgtcggtgttgtgtcgttgccggacacgacacatgtcggacaccgggacacgccttcaatcataagtgtccg 37496824  T
Q  90 tgcaacaga 98  Q
    |||||||||    
T  37496825 tgcaacaga 37496833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44362687 - 44362772
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 86  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||| |||| |||||||  ||||||| |||| ||||||||||||    
T  44362687 aaatgacataatttaatgtaatcacaagtgttggtgtcagacacgacacgtatcggacatcgggacacaccttaaatcagaagtgt 44362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23293024 - 23292953
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| | |||| ||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  23293024 aaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcct 23292953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12797376 - 12797310
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggaca 67  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||||| |||| ||||| ||||||    
T  12797376 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggaca 12797310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 49431047 - 49431119
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    |||| |||||||||| |||||| | ||||||||||||||||||||| |||||||  |||| ||||||||||||    
T  49431047 aaatcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgcctt 49431119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13117450 - 13117493
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 44  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  13117450 aaatgacaaaattcaatgtaatcacaagtgtcggtgtcggacac 13117493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 16073421 - 16073474
Alignment:
Q  7 cataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 60  Q
    ||||||||| |||||| |||||||||||||||||||||||||| |||| |||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacac 16073474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29205465 - 29205533
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||| |||||||||| |||||| |||||||||||||| |||||||| || |||| ||||| ||||||||    
T  29205465 aaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 10635053 - 10635120
Alignment:
Q  31 tcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||||||| |||| ||||||||||||||||  |||||   ||||||||||||| ||||||||||||||    
T  10635053 tcggtgtcagacatgatacgtgtcggacacccggacaactcttcaatcagaagagttcgtgcaacaga 10635120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21945524 - 21945583
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 60  Q
    ||||||||||||||| |||||| |||||||||||||||||||| || || |||| |||||    
T  21945524 aaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacac 21945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28964286 - 28964215
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||| ||||||||||||| || | || ||||| |||||||||||    
T  28964286 aaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcct 28964215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 34306826 - 34306771
Alignment:
Q  17 tgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||    
T  34306826 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 34306771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 39619092 - 39619045
Alignment:
Q  49 cgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaaca 96  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  39619092 cgtgtcggacaccgggacacaccttcaatcagaagtgtccgtgcaaca 39619045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5998838 - 5998934
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||| ||||||||||||| ||||| |||||||  |||| |||||   |||||||||||||  |||||| |||||||||| ||||||  ||||||||||    
T  5998838 aaataacataattcaatgcaatcataagtgtca-tgtcagacacatcacgtgtcggacacctggacacaccttcaatcataagtgtcggtgcaacaga 5998934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 54580061 - 54580008
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 54  Q
    |||| |||||||||| |||||| | ||||||||||||||||||||| |||||||    
T  54580061 aaatcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtc 54580008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11797666 - 11797630
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgt 37  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11797666 aaatgacataatttaatgtaatcacaagtgtcggtgt 11797630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42640550 - 42640594
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||    
T  42640550 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 42640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8423756 - 8423685
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| | || |||||||||||||||||| |  |||| ||||| |||||||||||    
T  8423756 aaatcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcct 8423685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10164892 - 10164861
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtc 32  Q
    ||||||||||||||||||||||||||||||||    
T  10164892 aaatgacataattcaatgtaatcacaagtgtc 10164861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 56049897 - 56049956
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 60  Q
    |||||||||| ||||||||||||| | ||||||||||| |||| ||||||| || |||||    
T  56049897 aaatgacatagttcaatgtaatcatatgtgtcggtgtcagacatgatacgtatccgacac 56049956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 715645 - 715572
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc--ggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| |||||||| ||||||  | |||||| || |||| |||||||||||||||||    
T  715645 aaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcct 715572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 752971 - 752898
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc--ggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| |||||||| ||||||  | |||||| || |||| |||||||||||||||||    
T  752971 aaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcct 752898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22799931 - 22799893
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  22799931 aaatgacataattcaatgtaatcacacgtgtcagtgtcg 22799893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30298968 - 30299006
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  30298968 aaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30327836 - 30327874
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  30327836 aaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 5414172 - 5414127
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| ||||    
T  5414172 gtgtcagtgtcggacacgacacgtgtctgacacagggacacacctt 5414127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6879503 - 6879459
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||| | |||||| ||||||||||||||||||||||    
T  6879503 aaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 6879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13484044 - 13484088
Alignment:
Q  1 aaatgacataattcaa-tgtaatcacaagtgtcggtgtcggacac 44  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||    
T  13484044 aaataacataattcaaatgtaatcacaagtgtcagtgtcggacac 13484088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 13484078 - 13484126
Alignment:
Q  50 gtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    ||||||||||| || ||| || |||||||||||||||| ||||||||||    
T  13484078 gtgtcggacactggaacatgcattcaatcagaagtgttggtgcaacaga 13484126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 30982878 - 30982834
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||| ||||||| ||||||| ||||| |||||||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcct 30982834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40224536 - 40224468
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    ||||||||||||| |||||||||| | |||||||||| ||||| |||| || || ||||  ||||||||    
T  40224536 aaatgacataatttaatgtaatcatatgtgtcggtgttggacatgatatgtttccgacattgggacacg 40224468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 47492400 - 47492436
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgt 37  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  47492400 aaatgacataatttaatgtaatcacaagtgtcagtgt 47492436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26402718 - 26402624
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaac 95  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| | |||||  |||||||||||||||| ||||||||    
T  26402718 aaatgacataattcagtgtaatcacaagtgtcggtgtcggacacgatacatgttggacaccgagacacttcttcaatcagaagtgtccgtgcaac 26402624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 1334686 - 1334774
Alignment:
Q  5 gacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgca 93  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||  |||||| ||||||||||||||||| ||||||    
T  1334686 gacataattcaatgtaatcacaaatgtcggtgtcgaacacgatgcgtgtcgaacaccaggacacaccttcaatcagaagtgtccgtgca 1334774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28715316 - 28715387
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||  ||||| |||||||||||    
T  28715316 aaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcct 28715387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 32225416 - 32225331
Alignment:
Q  13 tcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||||||||||||| |||||||||||||||||||  | ||||||||||  |||||| ||||||||||| |||||| ||||| ||||    
T  32225416 tcaatgtaatcacaggtgtcggtgtcggacacgacccctgtcggacacctggacacaccttcaatcaggagtgtttgtgcagcaga 32225331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28152119 - 28152190
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||| |||||| ||||    
T  28152119 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcct 28152190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34595155 - 34595222
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 68  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||| |||||||    
T  34595155 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacac 34595222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6751920 - 6751878
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6751920 aaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 6751878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 26178527 - 26178601
Alignment:
Q  24 acaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||||| |||||||||||||||| ||||||||||||  ||||||  ||||||||||||||||| |||||| ||||    
T  26178527 acaagtatcggtgtcggacacgacacgtgtcggacatcgggacataccttcaatcagaagtgtccgtgcatcaga 26178601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19369838 - 19369923
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||||||||||||||||||||||||||||||||||||           |||||| ||||| | ||||||||||||||||||||||| |||||||||||    
T  19369838 aaatgacataattcaatgtaatcacaagtgtcggtgt-----------cgtgtc-gacaccgagacacgccttcaatcagaagtgtccgtgcaacaga 19369923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 785455 - 785385
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||||||||||| ||| |||  |||||||||||  |||||| ||||||||||||||||| |||||||||||    
T  785455 gtgtcggtgtcgaacatgatgtgtgtcggacaccaggacacaccttcaatcagaagtgtccgtgcaacaga 785385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 785492 - 785455
Alignment:
Q  2 aatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  785492 aatgacataattcaatgtaatcacaagtgtcggtgtcg 785455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 32978932 - 32978869
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||||||| | |||||| ||||||||||||||||||||||| || |||| ||||| ||||||||    
T  32978932 acataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacg 32978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 426552 - 426508
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||| |||||||| ||||||||||||||||||||||    
T  426552 aaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7977868 - 7977825
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 44  Q
    |||| |||||||||| |||||| |||||||||||||||||||||    
T  7977868 aaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17841627 - 17841556
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||| | |||||| ||||||| ||||||||||||||| | ||||| ||||| | |||||||||    
T  17841627 aaatcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccgacactgagacacgcct 17841556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33001327 - 33001268
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 60  Q
    |||| |||||||| |||||||| | | ||||||||||||||||||| ||||||| |||||    
T  33001327 aaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 33001268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 4877969 - 4878034
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||| | | |||| ||||||||||||||||||||||| || |||| |||||| ||||||||||    
T  4877969 acataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgacaca-ggacacgcct 4878034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 10031591 - 10031621
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgt 31  Q
    |||||||||||||||||||||||||||||||    
T  10031591 aaatgacataattcaatgtaatcacaagtgt 10031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 10158005 - 10158039
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggt 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  10158005 aaatgacataattcaatgtaatcacatgtgtcggt 10158039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 17327655 - 17327617
Alignment:
Q  34 gtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcct 17327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6898319 - 6898274
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 46  Q
    |||| |||||||| | |||||| |||||||||||||||||||||||    
T  6898319 aaattacataattaagtgtaattacaagtgtcggtgtcggacacga 6898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7378000 - 7378045
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 46  Q
    |||| ||||||||||||||||| | | |||||||||||||||||||    
T  7378000 aaatcacataattcaatgtaattatatgtgtcggtgtcggacacga 7378045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 13364736 - 13364675
Alignment:
Q  8 ataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||||||| |||||||| | |||||||||| ||||||||||| |||| |||||  |||||||    
T  13364736 ataattcagtgtaatcatatgtgtcggtgttggacacgatacatgtctgacaccaggacacg 13364675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 16388248 - 16388211
Alignment:
Q  8 ataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcggacacg 16388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 16488590 - 16488545
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||||||||||||||||| ||||||| | ||| ||||||||||||    
T  16488590 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgcctt 16488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 23771610 - 23771667
Alignment:
Q  12 ttcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||| |||||| |||| |||||||||||||||||| | ||||| ||||||| ||||||    
T  23771610 ttcagtgtaattacaaatgtcggtgtcggacacgacatgtgtccgacacagagacacg 23771667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 7942277 - 7942373
Alignment:
Q  2 aatgacataattcaatgtaatcacaagtgt-----cggtgtcggacac-gatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgc 92  Q
    ||||||||||||||||||||||||| ||||     | ||||||||||| || |||||||||||||   ||||| ||||  |||||||||||| ||||    
T  7942277 aatgacataattcaatgtaatcacatgtgtcagtgctgtgtcggacactgacacgtgtcggacaccacgacacaccttagatcagaagtgttggtgc 7942373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 8365519 - 8365475
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||| |||||||||| ||||||| ||||| |||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcct 8365475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 10339125 - 10339081
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||||||| || |||| ||||| |||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcct 10339081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 16766756 - 16766800
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||||| | ||||||| ||||| |||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcct 16766800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 30851630 - 30851674
Alignment:
Q  10 aattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 54  Q
    ||||||||||||| | | ||||||||||||||||||| |||||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacacgacacgtgtc 30851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 9e-27; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34834965 - 34834869
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  34834965 aaatgacataattcaat-taatcacgagtatcggtgtcggacttgatacatgtcggacaccgggacacgccttcaatcagaagtgtccgtgcaacaga 34834869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10954973 - 10955044
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  10954973 aaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcct 10955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14338521 - 14338454
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 68  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||||||| |||||||    
T  14338521 aaatgacataattcaatgtaatcacaaatgtcggtgtcagacacgacacgtatcggacaccgggacac 14338454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 20503486 - 20503557
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||| || |||| ||||| |||||||||||    
T  20503486 aaatgacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcct 20503557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 55401096 - 55401167
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||| | |||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||    
T  55401096 aaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 55401167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28918022 - 28918095
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc--ggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| |||||||||||||||  |||||||| ||||||| ||||| |||||||||||    
T  28918022 aaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcct 28918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35222959 - 35223028
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgc 70  Q
    |||| ||||||||||||||||| | | |||||||||||||||| || ||||||| ||||| |||||||||    
T  35222959 aaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgc 35223028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 40993373 - 40993302
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| | | ||||||||||||||||||| || |||| ||||| |||||||||||    
T  40993373 aaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcct 40993302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 7171529 - 7171593
Alignment:
Q  8 ataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||  |||||| |||||||| |||||||||||||| ||||||| ||||| | |||||||||    
T  7171529 ataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcct 7171593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 23272029 - 23271982
Alignment:
Q  4 tgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgt 51  Q
    |||||||||| |||||||||| | |||||||||| |||||||||||||    
T  23272029 tgacataattgaatgtaatcatatgtgtcggtgttggacacgatacgt 23271982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 25775535 - 25775574
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  25775535 acataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 49179750 - 49179715
Alignment:
Q  4 tgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    ||||||||||| ||||||||||||||||||||||||    
T  49179750 tgacataattcgatgtaatcacaagtgtcggtgtcg 49179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44427862 - 44427900
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  44427862 aaatgacataatccaatgtaatcacatgtgtcggtgtcg 44427900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6984785 - 6984865
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaa 82  Q
    |||| ||| |||||||| |||||||||| ||||||||||||||| | | ||||  ||||| |||| ||| ||||||||||||    
T  6984785 aaataacacaattcaatataatcacaagagtcggtgtcggacacaacaagtgt-agacacggggatacgacttcaatcagaa 6984865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 13845536 - 13845491
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||||||||||||||||| ||||||| ||||| | ||||||||||    
T  13845536 gtgtcggtgtcggacacgagacgtgtctgacacggagacacgcctt 13845491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3865700 - 3865748
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 54  Q
    |||||||||| | |||| ||||||||||||||| ||||||| |||||||    
T  3865700 acataattcagtataattacaagtgtcggtgtctgacacgacacgtgtc 3865748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 4987291 - 4987247
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||||| |||||||| ||||||| ||||| |||||||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcct 4987247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 14832158 - 14832202
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||| |||||||||| ||||||| ||||| |||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcct 14832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16000054 - 16000010
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||||| |||||  ||||||||||||||||||||||    
T  16000054 aaataacataattcagtgtaactacaagtgtcggtgtcggacacg 16000010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 41961650 - 41961606
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||| |||||||||| ||||||| ||||| |||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcct 41961606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 54690376 - 54690304
Alignment:
Q  26 aagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    ||||||||||||||||||| | || ||| | |||| ||||| ||||||| |||| |||| || ||||||||||    
T  54690376 aagtgtcggtgtcggacacaacacatgttgcacactgggacgcgccttcgatcaaaagttttggtgcaacaga 54690304  T

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Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42874543 - 42874620
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatc 78  Q
    |||||||||||||||||||||||||||||||| |||| |||||| | || |||||||||  | |||||||||||||||    
T  42874543 aaatgacataattcaatgtaatcacaagtgtcagtgttggacacaacacatgtcggacatcgagacacgccttcaatc 42874620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 4188994 - 4189068
Alignment:
Q  235 gcatgaagacatagctatagatgacaccagccaaaccaccaccaataagaggtccaacccaatagatccagttgt 309  Q
    ||||||| |||| || |||||| |  |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4188994 gcatgaacacattgccatagataagcccagccaaaccaccaccaataagaggcccagcccaatagatccagttgt 4189068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26915278 - 26915201
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcg-----gtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||||||||||| |||||||||||||||||||     ||||||||||||||||||||| ||||  ||||||||||||    
T  26915278 aaatgacataatttaatgtaatcacaagtgtcgtgtcggtgtcggacacgatacgtgtcagacattgggacacgcctt 26915201  T

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Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 10497816 - 10497746
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||||||||||| |||  |||| ||||  |||| |||||||||||||||||||| ||||||||||||||||    
T  10497816 gtgtcggtgtcgaacataatacatgtcaaacaccgggacacgccttcaatcagaggtgttcgtgcaacaga 10497746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34074016 - 34073922
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaac 95  Q
    ||||||||||||| |||||||||| |||||||| | || ||||||  |||||||| |||    |||||||||||||||| ||||||| |||||||    
T  34074016 aaatgacataatttaatgtaatcataagtgtcgatatcagacacgtcacgtgtcgcacatcatgacacgccttcaatcaaaagtgtttgtgcaac 34073922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20873090 - 20873143
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 54  Q
    |||| |||||||| | |||||| |||||||||||||||||||||||||||||||    
T  20873090 aaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtc 20873143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 5813636 - 5813684
Alignment:
Q  24 acaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  5813636 acaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcct 5813684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40332212 - 40332283
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| |||||||||||||| |||||||| |||||||  |||| ||||| |||||    
T  40332212 aaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcct 40332283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4948673 - 4948718
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 46  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||    
T  4948673 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31548331 - 31548294
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  31548331 aaatgacataattcaatgtaatcacatgtgtcggtgtc 31548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 34451032 - 34450987
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  34451032 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctt 34450987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31119108 - 31119140
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcg 33  Q
    |||||||||||||||||||||||||||||||||    
T  31119108 aaatgacataattcaatgtaatcacaagtgtcg 31119140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 44462229 - 44462165
Alignment:
Q  5 gacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||| |||||||| |||||| | ||||||||||| |||||||||| |||| ||||| ||||||||    
T  44462229 gacacaattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacg 44462165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 44469762 - 44469698
Alignment:
Q  5 gacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||| |||||||| |||||| | ||||||||||| |||||||||| |||| ||||| ||||||||    
T  44469762 gacacaattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacg 44469698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36450792 - 36450721
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| ||| |||||| |||||| |||||||| ||||||||||||||  |||||| |||||  ||||||||||    
T  36450792 aaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcct 36450721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5307081 - 5307119
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  5307081 aaatgacataattcaatgaaatcataagtgtcggtgtcg 5307119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10002201 - 10002163
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  10002201 aaatgacataatttaatgtaatcacatgtgtcggtgtcg 10002163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18170520 - 18170478
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 43  Q
    |||| ||||||||||||||||| |||| |||||||||||||||    
T  18170520 aaattacataattcaatgtaattacaaatgtcggtgtcggaca 18170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18634088 - 18634046
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 43  Q
    |||| ||||||||||||||||| |||| |||||||||||||||    
T  18634088 aaattacataattcaatgtaattacaaatgtcggtgtcggaca 18634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24295175 - 24295138
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  24295175 aaatgacacaatttaatgtaatcacaagtgtcggtgtc 24295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26434201 - 26434254
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc 54  Q
    |||| |||||||||||| |||| | |||||||||||| |||||| |||||||||    
T  26434201 aaatcacataattcaatataattaaaagtgtcggtgttggacacaatacgtgtc 26434254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27733868 - 27733905
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  27733868 aaatgatataattcaatgtaatcacaagtgttggtgtc 27733905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3025572 - 3025640
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||| |||||||||| |||||| | | ||||| ||||||||||||| ||||||| ||||| | ||||||    
T  3025572 aaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacg 3025640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20679433 - 20679361
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    |||| ||||| |||| |||||| | ||||||||||||| ||| | | ||||||| ||||| ||||||||||||    
T  20679433 aaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgcctt 20679361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24613541 - 24613585
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||| | |||||| ||||||||||||||||||||||    
T  24613541 aaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 24613585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21576783 - 21576712
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| |||||||||| |||||||||||| ||||||| ||||| |||||||||||    
T  21576783 aaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcct 21576712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 7621270 - 7621171
Alignment:
Q  4 tgacataattcaatgtaatcacaagtgtcggtgtcg-----gacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||||||||| ||||||||||||||| ||||||||      |||||||||| | |||||||   ||||||| |||||||||||||||| |||||||||||    
T  7621270 tgacataatttaatgtaatcacaagtatcggtgtcatatcagacacgatacttatcggacatcaggacacgtcttcaatcagaagtgtccgtgcaacaga 7621171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21191094 - 21191023
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||||||||||||||| | ||||||| ||| | |||||||||||    
T  21191094 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcct 21191023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 11084325 - 11084395
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaa 76  Q
    ||||||||||| ||| |||| ||||||||||| |||||||| || ||||| |||| |||||||||||||||    
T  11084325 acataattcaacgtagtcactagtgtcggtgttggacacgacacatgtcgaacaccgggacacgccttcaa 11084395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19167614 - 19167571
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 44  Q
    |||||||| ||||||||||||||||||||||||||||| |||||    
T  19167614 aaatgacacaattcaatgtaatcacaagtgtcggtgtcagacac 19167571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 27932256 - 27932327
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| |||| | | |||||||||||||| |||||||||||||  ||||||||||    
T  27932256 aaattacataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcct 27932327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8420048 - 8420089
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggac 42  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  8420048 aaataacataattcaatgtaattacaagtgtcggtgtcggac 8420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15884009 - 15884054
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 46  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||    
T  15884009 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 15884054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6247643 - 6247687
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||    
T  6247643 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 16207626 - 16207586
Alignment:
Q  4 tgacataattcaatgtaatcacaagtgtcggtgtcggacac 44  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  16207626 tgacataattcaatgtaatcacaagtgttggtgtcagacac 16207586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30080539 - 30080503
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgt 37  Q
    ||||||||||||||||||||||||||||| |||||||    
T  30080539 aaatgacataattcaatgtaatcacaagtatcggtgt 30080503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 31084344 - 31084420
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcg-----gtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| ||||||||||||||||| ||||||||||     ||||||||||||| ||||||| ||||| |||||| ||||    
T  31084344 aaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactgggacatgcct 31084420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2548408 - 2548451
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 44  Q
    |||| |||||||||| |||||||| |||||||||||||||||||    
T  2548408 aaattacataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 98
Target Start/End: Complemental strand, 9031914 - 9031879
Alignment:
Q  63 ggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    |||||||||||||||||||||||| |||||||||||    
T  9031914 ggacacgccttcaatcagaagtgtccgtgcaacaga 9031879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 21542089 - 21542132
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcc 71  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcc 21542132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 42893381 - 42893452
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| ||||||| || |||||| ||||||||||||||| ||||| | ||||||| |||||  ||||||||||    
T  42893381 aaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcct 42893452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43564902 - 43564973
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||| | |||||| | ||||||||||||||||||||| | ||||| ||| | |||||||||||    
T  43564902 aaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcct 43564973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10010575 - 10010617
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 43  Q
    ||||||||||||||| |||||||||| |||||||||| |||||    
T  10010575 aaatgacataattcattgtaatcacatgtgtcggtgtgggaca 10010617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24906339 - 24906297
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 43  Q
    ||||||||||||||| |||||| |||||||||||| |||||||    
T  24906339 aaatgacataattcagtgtaattacaagtgtcggtatcggaca 24906297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 30099070 - 30099004
Alignment:
Q  7 cataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||||||  |||||| | | |||||||||||||| |||| ||||||| ||||| ||||||||||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgcctt 30099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10009847 - 10009884
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  10009847 aaatgacataattcaatgtaatcacatgtgtcgttgtc 10009884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21319983 - 21319946
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  21319983 aaatgatataattcaatgtaatcacaagtgtcgatgtc 21319946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 21814320 - 21814365
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||||||||||||||||| ||||||| | ||| ||||||||||||    
T  21814320 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgcctt 21814365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 21522809 - 21522853
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||||||| ||||||| | ||| |||||||||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcct 21522853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 21533375 - 21533419
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||||||| ||||||| | ||| |||||||||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcct 21533419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 32444789 - 32444825
Alignment:
Q  3 atgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    |||||||||||||||||||||| | ||||||||||||    
T  32444789 atgacataattcaatgtaatcaaatgtgtcggtgtcg 32444825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8969 - 9061
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaac 95  Q
    |||||||||||||||| |||||||||||||||||||||  |     |  ||||||||||| |||||||||||||||||||||||||  |||||||    
T  8969 aaatgacataattcaacgtaatcacaagtgtcggtgtc--atgtcgtgtgtgtcggacaccgggacacgccttcaatcagaagtgtctgtgcaac 9061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1815278 - 1815349
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||||||||| ||||||| || |||| ||||| |||||||||||    
T  1815278 aaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcct 1815349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18337350 - 18337421
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||||||||||||||| | ||||||| ||||| |||||| ||||    
T  18337350 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcct 18337421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 51410046 - 51410117
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||| |||| || ||||| | |||||||||    
T  51410046 aaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcct 51410117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19637789 - 19637854
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggac 66  Q
    ||||||||| |||||||||||||| | |||||||||||||||||||||| | || ||||| |||||    
T  19637789 aaatgacattattcaatgtaatcatatgtgtcggtgtcggacacgatacatatccgacaccgggac 19637854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38078699 - 38078654
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 46  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  38078699 aaatcacataattcaatgtaattacaagtgtcggtgtcggacacga 38078654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 46348414 - 46348350
Alignment:
Q  8 ataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||| | |||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||    
T  46348414 ataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 46348350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50195503 - 50195459
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  50195503 aaatgacataattgaatgtaatcacatgtgtcggtgtcggacacg 50195459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 7988486 - 7988439
Alignment:
Q  4 tgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgt 51  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  7988486 tgacataattcaatgtaatcataagtgttggtgtcggacacaatacgt 7988439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 40258971 - 40258900
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| ||||||||||||||| ||||||| || |||| |||||  ||||||||||    
T  40258971 aaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcct 40258900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 37598861 - 37598923
Alignment:
Q  10 aattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||| |||||| | ||||||||||||||||||||| ||||||| ||||  |||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcct 37598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17007999 - 17007954
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 46  Q
    |||| |||||||||||| |||||||||||||| |||||||||||||    
T  17007999 aaattacataattcaatataatcacaagtgtcagtgtcggacacga 17007954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31667446 - 31667487
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggac 42  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  31667446 aaatgacataattaaatgtaatcacatgtgtcggtgtcggac 31667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29163419 - 29163351
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacg 69  Q
    |||| |||||||||||| |||| | | ||||||||||||||||||| ||||| | ||||| ||||||||    
T  29163419 aaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacg 29163351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 32461464 - 32461420
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  32461464 gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcct 32461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17893886 - 17893949
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtc-ggacacagg 63  Q
    |||||| |||||| ||| | |||||| |||||||||||| |||||||||||||| |||||||||    
T  17893886 aaatgatataatttaatattatcacacgtgtcggtgtcgtacacgatacgtgtctggacacagg 17893949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 19058889 - 19058850
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  19058889 acataattcagtgtaattacaagtgtcggtgtcggacacg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22515925 - 22515854
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||| | |||||| ||||||||||||||||||||||| || | || ||||| | |||||||||    
T  22515925 aaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcct 22515854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42359487 - 42359416
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| ||| |||||| |||||| |||||||||||||||||||| ||   ||||| ||||| |||||||||||    
T  42359487 aaatcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcct 42359416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 24334737 - 24334699
Alignment:
Q  7 cataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcggacacg 24334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24462308 - 24462270
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  24462308 aaatgacataattcaatgtaatcacaagtttcagtgtcg 24462270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26390171 - 26390133
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg 39  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  26390171 aaatgacataattgaatgtaatcacaagtgtcagtgtcg 26390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 7888122 - 7888155
Alignment:
Q  7 cataattcaatgtaatcacaagtgtcggtgtcgg 40  Q
    ||||||| ||||||||||||||||||||||||||    
T  7888122 cataatttaatgtaatcacaagtgtcggtgtcgg 7888155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22881654 - 22881609
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacga 46  Q
    |||| |||||||| | |||||| |||||||||||||||||||||||    
T  22881654 aaatcacataatttagtgtaattacaagtgtcggtgtcggacacga 22881609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 25934675 - 25934720
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcctt 73  Q
    ||||||||||||||||||| ||||||| ||||| |||| |||||||    
T  25934675 gtgtcggtgtcggacacgacacgtgtctgacacggggatacgcctt 25934720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28170402 - 28170439
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc 38  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  28170402 aaatgacataattcaatgtaataacaagtgtcagtgtc 28170439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1486747 - 1486671
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcg-----gacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| | ||||||||||||||     ||||||| ||||||| ||||| |||||||||||    
T  1486747 aaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcct 1486671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14332429 - 14332465
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgt 37  Q
    ||||||||||||||||||||||||||  |||||||||    
T  14332429 aaatgacataattcaatgtaatcacatatgtcggtgt 14332465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 14613113 - 14613061
Alignment:
Q  34 gtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 86  Q
    ||||||||||||| |  ||||||| || | |||||||||||||||||||||||    
T  14613113 gtgtcggacacgacatatgtcggatacggagacacgccttcaatcagaagtgt 14613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 40917808 - 40917852
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||||| |||||||| ||||||| ||||| |||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcct 40917852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41877508 - 41877464
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacg 45  Q
    |||| |||||||| | |||||| ||||||||||||||||||||||    
T  41877508 aaattacataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

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Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 45563 - 45509
Alignment:
Q  6 acataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 60  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacac 45509  T

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Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 500 - 433
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacac 68  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||  |||||| ||||| |||||||    
T  500 aaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacac 433  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 8835 - 8890
Alignment:
Q  17 tgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| | |||||||||    
T  8835 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcct 8890  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 70299 - 70358
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacac 60  Q
    |||| |||||||||| |||||| | ||||||||||||||||||||| ||||||| |||||    
T  70299 aaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacac 70358  T

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Target: scaffold0504 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 8691 - 8643
Alignment:
Q  50 gtgtcggacacagggacacgccttcaatcagaagtgttcgtgcaacaga 98  Q
    ||||| ||||| |||||| |||||||||||||||||| |||||||||||    
T  8691 gtgtcagacaccgggacatgccttcaatcagaagtgtccgtgcaacaga 8643  T

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Target: scaffold0793 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4921 - 4848
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtc--ggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| |||||||| ||||||  | |||||| || |||| |||||||||||||||||    
T  4921 aaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcct 4848  T

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Target: scaffold0512 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 5058 - 5016
Alignment:
Q  17 tgtaatcacaagtgtcggtgtcggacacgatacgtgtcggaca 59  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 5016  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14551 - 14619
Alignment:
Q  1 aaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||| |||||| |||||||   ||||||||||||| ||||||| ||||| | |||||||||    
T  14551 aaatcacataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtccgacaccgagacacgcct 14619  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 10313 - 10260
Alignment:
Q  33 ggtgtcggacacgatacgtgtcggacacagggacacgccttcaatcagaagtgt 86  Q
    |||||||||| |||| |||||||||||   |||||| |||||||||||||||||    
T  10313 ggtgtcggacgcgatgcgtgtcggacagcaggacacaccttcaatcagaagtgt 10260  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 8635 - 8591
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||||||| |||||||||||||||||| ||||| || ||||||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcct 8591  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 241653 - 241697
Alignment:
Q  28 gtgtcggtgtcggacacgatacgtgtcggacacagggacacgcct 72  Q
    |||| |||||||||||||| ||||||| ||||| |||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcct 241697  T

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