View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6431_low_26 (Length: 207)
Name: NF6431_low_26
Description: NF6431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6431_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 23836627 - 23836453
Alignment:
| Q |
16 |
atgaaccccgcaatacactttggtaattcagacttgtttctacataaaagagatggacaatcactgtcctgagtgcacttgtgaaagaattcaaaaaagt |
115 |
Q |
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| T |
23836627 |
atgaacccagcaatacattttggtaattcagacttgtttctacataaaagagatggacaatcactgtcctgagtgcacttgtgaaagaattcaaaaaagt |
23836528 |
T |
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| Q |
116 |
ttccacttacaacaagagttatatgaataaataggatcatagcatataaaaacttgtgaattgtacccatatttt |
190 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23836527 |
ttccacttacaacaagagttatatgaataaataggatcatagcatataaaaacttgtgaattgtacccatatttt |
23836453 |
T |
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