View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6432_high_4 (Length: 296)
Name: NF6432_high_4
Description: NF6432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6432_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 10 - 282
Target Start/End: Original strand, 7210516 - 7210788
Alignment:
| Q |
10 |
catcatcatctataaaagaattacttgacaaatggagcaatttgactaactttaaacaatttatgggagcaatttcatatgatgtatatttagagtccca |
109 |
Q |
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| T |
7210516 |
catcatcatctataaaagaattacttgacaaatggagcaatttgactaactttaaacaatttatgggagcaatttcatatgatgtatatttagagactca |
7210615 |
T |
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| Q |
110 |
aatcatcgtacactacaaaatacgtagtagtttactctatacattacttaaataactttttcttgtagtgtggacatggtatactatcatgaacataatg |
209 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7210616 |
aatcatcgtacactacaaaatacgtagtaggttactctatacattacctaaataactttttcttgtagtgtggacatggtatactatcatgaacataatg |
7210715 |
T |
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| Q |
210 |
tcatgagagatcacaaattcacgatgaccatgtaacatagcacatactttaatttgaatttgaaagtgaaatt |
282 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7210716 |
tcatgagagatcacaaattcacgatgaccatgtaacatagcacatactttaatttgaatttgaaagtgaaatt |
7210788 |
T |
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