View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6437_high_4 (Length: 353)

Name: NF6437_high_4
Description: NF6437
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6437_high_4
NF6437_high_4
[»] scaffold0058 (1 HSPs)
scaffold0058 (9-353)||(71825-72166)
[»] scaffold0195 (4 HSPs)
scaffold0195 (9-353)||(8196-8539)
scaffold0195 (9-353)||(13585-13928)
scaffold0195 (256-353)||(17827-17927)
scaffold0195 (256-353)||(19911-20011)
[»] scaffold0610 (1 HSPs)
scaffold0610 (9-353)||(2168-2511)
[»] chr6 (59 HSPs)
chr6 (107-352)||(33323189-33323434)
chr6 (9-147)||(33323040-33323178)
chr6 (169-353)||(18383230-18383416)
chr6 (172-353)||(16889293-16889473)
chr6 (169-353)||(17790689-17790870)
chr6 (256-353)||(16105083-16105181)
chr6 (256-353)||(22428700-22428798)
chr6 (256-353)||(18775736-18775834)
chr6 (257-349)||(34965471-34965564)
chr6 (257-353)||(31626964-31627061)
chr6 (256-353)||(25745844-25745942)
chr6 (238-349)||(19852777-19852889)
chr6 (285-353)||(16083970-16084039)
chr6 (257-353)||(22846651-22846752)
chr6 (169-280)||(31469169-31469282)
chr6 (285-353)||(35137496-35137565)
chr6 (173-280)||(6092955-6093062)
chr6 (264-349)||(16134812-16134898)
chr6 (238-346)||(23220204-23220313)
chr6 (169-280)||(19670910-19671023)
chr6 (256-353)||(19984735-19984834)
chr6 (256-353)||(1554375-1554472)
chr6 (257-301)||(18422260-18422304)
chr6 (9-56)||(32896282-32896329)
chr6 (23-88)||(15738496-15738562)
chr6 (9-74)||(25369229-25369295)
chr6 (256-301)||(25646517-25646562)
chr6 (256-301)||(35017302-35017347)
chr6 (256-353)||(18128805-18128908)
chr6 (15-72)||(940913-940971)
chr6 (9-47)||(16104850-16104888)
chr6 (257-302)||(21930418-21930464)
chr6 (9-74)||(22428473-22428538)
chr6 (256-328)||(1659265-1659337)
chr6 (9-45)||(13623085-13623121)
chr6 (256-328)||(15861267-15861339)
chr6 (256-308)||(33316158-33316210)
chr6 (9-55)||(7829717-7829764)
chr6 (9-44)||(18128340-18128375)
chr6 (263-302)||(18397397-18397436)
chr6 (9-52)||(18843857-18843900)
chr6 (79-142)||(33323226-33323289)
chr6 (9-44)||(35011281-35011316)
chr6 (9-44)||(35017610-35017645)
chr6 (256-353)||(16238898-16238996)
chr6 (9-75)||(23151706-23151772)
chr6 (315-353)||(23151845-23151883)
chr6 (9-47)||(25746122-25746160)
chr6 (257-302)||(13016434-13016479)
chr6 (257-302)||(15738714-15738759)
chr6 (146-203)||(33323112-33323169)
chr6 (170-249)||(940757-940837)
chr6 (256-308)||(1651524-1651576)
chr6 (256-308)||(10487414-10487466)
chr6 (313-349)||(16374963-16374999)
chr6 (256-308)||(16377861-16377913)
chr6 (256-308)||(16385185-16385237)
chr6 (256-308)||(16827454-16827506)
chr6 (9-44)||(16889621-16889657)
[»] chr3 (89 HSPs)
chr3 (79-353)||(55442308-55442586)
chr3 (169-353)||(12490279-12490465)
chr3 (169-353)||(11330550-11330735)
chr3 (169-353)||(48420104-48420290)
chr3 (191-353)||(15874619-15874783)
chr3 (169-353)||(18008679-18008865)
chr3 (257-349)||(5229627-5229720)
chr3 (257-353)||(38812538-38812634)
chr3 (257-352)||(47983419-47983516)
chr3 (257-352)||(47992706-47992803)
chr3 (257-352)||(48001993-48002090)
chr3 (257-352)||(48011279-48011376)
chr3 (256-353)||(12351386-12351484)
chr3 (256-353)||(50113668-50113766)
chr3 (256-352)||(319155-319252)
chr3 (257-353)||(7852329-7852426)
chr3 (257-353)||(47786411-47786508)
chr3 (9-85)||(55443672-55443748)
chr3 (258-349)||(33370914-33371005)
chr3 (256-353)||(8630367-8630465)
chr3 (9-88)||(39654163-39654243)
chr3 (238-349)||(41660117-41660229)
chr3 (257-349)||(9592300-9592393)
chr3 (257-353)||(14060783-14060880)
chr3 (9-88)||(17137699-17137779)
chr3 (9-88)||(25769532-25769612)
chr3 (9-75)||(11062954-11063020)
chr3 (14-88)||(11884005-11884079)
chr3 (256-353)||(23491033-23491133)
chr3 (256-301)||(6148456-6148501)
chr3 (257-302)||(12951512-12951557)
chr3 (257-302)||(14523004-14523049)
chr3 (256-353)||(2048588-2048687)
chr3 (9-88)||(14061031-14061110)
chr3 (9-72)||(12563334-12563397)
chr3 (9-74)||(15515925-15515991)
chr3 (256-353)||(33340370-33340470)
chr3 (256-353)||(10737086-10737183)
chr3 (256-301)||(11813359-11813404)
chr3 (257-302)||(17536604-17536649)
chr3 (256-301)||(19572429-19572474)
chr3 (258-328)||(51160038-51160110)
chr3 (257-301)||(16183664-16183708)
chr3 (256-353)||(5227245-5227343)
chr3 (9-75)||(11199349-11199415)
chr3 (172-272)||(11636938-11637040)
chr3 (9-75)||(14287323-14287389)
chr3 (9-75)||(17536857-17536923)
chr3 (9-47)||(35121921-35121959)
chr3 (257-302)||(11062689-11062734)
chr3 (257-302)||(11883921-11883966)
chr3 (257-302)||(14296957-14297002)
chr3 (257-302)||(14302584-14302629)
chr3 (256-353)||(14846192-14846289)
chr3 (9-42)||(17936455-17936488)
chr3 (256-301)||(22145881-22145926)
chr3 (263-303)||(12774897-12774937)
chr3 (257-301)||(17099138-17099182)
chr3 (78-142)||(18008827-18008891)
chr3 (256-328)||(19945156-19945228)
chr3 (9-44)||(319451-319486)
chr3 (9-44)||(12351674-12351709)
chr3 (9-44)||(14523243-14523278)
chr3 (9-47)||(15548828-15548867)
chr3 (9-55)||(15874506-15874553)
chr3 (260-302)||(15989507-15989550)
chr3 (9-44)||(17098913-17098948)
chr3 (9-44)||(18737974-18738009)
chr3 (256-353)||(19230579-19230678)
chr3 (266-301)||(30204927-30204962)
chr3 (9-44)||(38166213-38166248)
chr3 (9-47)||(13815856-13815894)
chr3 (9-47)||(22146107-22146145)
chr3 (9-47)||(50113953-50113991)
chr3 (9-45)||(11330803-11330840)
chr3 (257-302)||(12563134-12563179)
chr3 (257-302)||(14287553-14287598)
chr3 (257-302)||(35122146-35122191)
chr3 (256-308)||(1469228-1469280)
chr3 (78-138)||(11636909-11636969)
chr3 (256-308)||(12266065-12266117)
chr3 (82-142)||(12490427-12490487)
chr3 (262-302)||(15516159-15516199)
chr3 (256-308)||(15574574-15574626)
chr3 (256-308)||(15613593-15613645)
chr3 (256-308)||(16259573-16259625)
chr3 (256-308)||(23081740-23081792)
chr3 (254-302)||(39654373-39654421)
chr3 (82-142)||(48420082-48420142)
[»] chr5 (45 HSPs)
chr5 (142-353)||(7726988-7727200)
chr5 (171-353)||(37189674-37189858)
chr5 (169-353)||(23492441-23492625)
chr5 (163-353)||(13793560-13793752)
chr5 (171-353)||(32967718-32967902)
chr5 (173-353)||(28888358-28888541)
chr5 (257-353)||(21615537-21615634)
chr5 (257-353)||(24227013-24227110)
chr5 (9-142)||(7726919-7727053)
chr5 (256-353)||(27185374-27185472)
chr5 (257-353)||(19860758-19860855)
chr5 (256-349)||(21661268-21661362)
chr5 (256-353)||(4863789-4863887)
chr5 (248-349)||(11964464-11964566)
chr5 (257-349)||(20455647-20455740)
chr5 (257-300)||(5452432-5452475)
chr5 (257-302)||(23453411-23453456)
chr5 (257-302)||(23460655-23460700)
chr5 (257-302)||(23464916-23464961)
chr5 (257-301)||(21392655-21392699)
chr5 (9-80)||(11338731-11338802)
chr5 (9-47)||(24185099-24185137)
chr5 (260-301)||(1170320-1170361)
chr5 (257-302)||(3672454-3672499)
chr5 (256-301)||(11582370-11582415)
chr5 (9-62)||(23453184-23453237)
chr5 (9-62)||(23460428-23460481)
chr5 (9-62)||(23464689-23464742)
chr5 (256-301)||(24470760-24470805)
chr5 (256-301)||(28258050-28258094)
chr5 (9-44)||(34937571-34937606)
chr5 (9-62)||(19403813-19403866)
chr5 (9-45)||(23492236-23492273)
chr5 (257-302)||(24184867-24184912)
chr5 (256-304)||(10779879-10779927)
chr5 (256-308)||(16534837-16534889)
chr5 (256-304)||(19498330-19498378)
chr5 (261-301)||(21653051-21653091)
chr5 (256-308)||(21933855-21933907)
chr5 (256-308)||(21940025-21940077)
chr5 (256-308)||(22368180-22368232)
chr5 (78-138)||(23236117-23236177)
chr5 (256-308)||(35580785-35580837)
chr5 (256-308)||(35792826-35792878)
chr5 (256-308)||(37010859-37010911)
[»] chr4 (59 HSPs)
chr4 (142-353)||(27959439-27959651)
chr4 (169-353)||(37958607-37958793)
chr4 (170-353)||(12245802-12245985)
chr4 (188-353)||(34197715-34197882)
chr4 (169-353)||(15852866-15853052)
chr4 (256-353)||(12901313-12901411)
chr4 (9-142)||(27959370-27959504)
chr4 (169-353)||(41167484-41167665)
chr4 (256-353)||(21961109-21961207)
chr4 (256-353)||(8874034-8874132)
chr4 (257-353)||(14900002-14900099)
chr4 (238-349)||(10238987-10239099)
chr4 (257-349)||(41257902-41257995)
chr4 (257-349)||(5372248-5372341)
chr4 (260-349)||(47469887-47469977)
chr4 (9-74)||(13811493-13811558)
chr4 (169-280)||(7966230-7966342)
chr4 (238-349)||(50223712-50223824)
chr4 (257-316)||(12837906-12837965)
chr4 (256-353)||(110010-110107)
chr4 (169-280)||(13448670-13448783)
chr4 (9-82)||(45460821-45460894)
chr4 (257-304)||(15043400-15043447)
chr4 (257-304)||(15110977-15111024)
chr4 (9-75)||(12901566-12901631)
chr4 (144-280)||(13595659-13595797)
chr4 (9-75)||(20813824-20813890)
chr4 (256-302)||(44345289-44345335)
chr4 (256-301)||(16366360-16366405)
chr4 (9-54)||(30236366-30236411)
chr4 (257-302)||(43283041-43283086)
chr4 (9-57)||(43283244-43283293)
chr4 (256-301)||(53909430-53909475)
chr4 (169-264)||(5407576-5407672)
chr4 (257-316)||(17377024-17377083)
chr4 (257-300)||(33738688-33738731)
chr4 (9-56)||(44054168-44054215)
chr4 (9-75)||(18294680-18294746)
chr4 (9-47)||(21961402-21961440)
chr4 (256-302)||(30236145-30236191)
chr4 (256-302)||(44054383-44054429)
chr4 (9-57)||(14867696-14867745)
chr4 (257-302)||(52267123-52267168)
chr4 (78-142)||(37958755-37958819)
chr4 (9-44)||(8874311-8874346)
chr4 (9-44)||(33738477-33738512)
chr4 (9-44)||(53706793-53706828)
chr4 (256-302)||(18496063-18496109)
chr4 (257-302)||(13811285-13811330)
chr4 (257-302)||(16395700-16395745)
chr4 (9-45)||(34197988-34198025)
chr4 (257-302)||(45460609-45460654)
chr4 (78-142)||(5407550-5407614)
chr4 (78-142)||(7966304-7966368)
chr4 (78-138)||(13595738-13595798)
chr4 (256-308)||(14994728-14994780)
chr4 (256-353)||(16521316-16521415)
chr4 (256-304)||(19999055-19999103)
chr4 (257-301)||(53706464-53706508)
[»] scaffold0095 (2 HSPs)
scaffold0095 (142-353)||(7210-7421)
scaffold0095 (9-142)||(7356-7489)
[»] chr8 (68 HSPs)
chr8 (142-353)||(39448367-39448578)
chr8 (169-353)||(21192291-21192477)
chr8 (169-353)||(21199718-21199904)
chr8 (143-353)||(21695968-21696179)
chr8 (169-353)||(23835653-23835838)
chr8 (9-142)||(21695899-21696032)
chr8 (9-142)||(39448513-39448646)
chr8 (257-353)||(37655191-37655288)
chr8 (257-353)||(41244158-41244255)
chr8 (238-349)||(33170767-33170879)
chr8 (256-353)||(37605513-37605612)
chr8 (257-349)||(22498852-22498945)
chr8 (238-349)||(23116369-23116481)
chr8 (266-353)||(31195829-31195917)
chr8 (282-353)||(41245210-41245282)
chr8 (257-349)||(22312191-22312284)
chr8 (257-349)||(33612610-33612703)
chr8 (261-316)||(25294527-25294582)
chr8 (261-316)||(25756516-25756571)
chr8 (257-349)||(23153358-23153451)
chr8 (257-349)||(45560767-45560860)
chr8 (256-353)||(16203868-16203967)
chr8 (257-327)||(24238066-24238137)
chr8 (172-280)||(45476020-45476130)
chr8 (256-353)||(270269-270365)
chr8 (256-353)||(645555-645651)
chr8 (256-353)||(831290-831386)
chr8 (257-302)||(20480123-20480168)
chr8 (257-301)||(19994801-19994845)
chr8 (257-301)||(24719076-24719120)
chr8 (257-301)||(25120969-25121013)
chr8 (9-75)||(18768624-18768691)
chr8 (257-302)||(16416767-16416812)
chr8 (257-302)||(28543397-28543442)
chr8 (256-353)||(29758821-29758920)
chr8 (9-72)||(17731324-17731387)
chr8 (172-280)||(21233662-21233772)
chr8 (9-74)||(22737768-22737834)
chr8 (9-47)||(24719475-24719513)
chr8 (256-353)||(24930646-24930746)
chr8 (9-74)||(38531882-38531948)
chr8 (169-280)||(18263044-18263157)
chr8 (256-301)||(22323101-22323145)
chr8 (9-44)||(269950-269985)
chr8 (9-44)||(645935-645970)
chr8 (9-44)||(831670-831705)
chr8 (9-44)||(16043210-16043245)
chr8 (9-52)||(28543151-28543194)
chr8 (9-56)||(37605283-37605330)
chr8 (9-75)||(3433652-3433718)
chr8 (9-75)||(13664677-13664743)
chr8 (9-75)||(13723952-13724018)
chr8 (9-47)||(20655905-20655943)
chr8 (257-302)||(17731115-17731160)
chr8 (257-302)||(21679663-21679708)
chr8 (9-57)||(31196399-31196448)
chr8 (257-302)||(38532109-38532154)
chr8 (256-308)||(272778-272830)
chr8 (256-308)||(643019-643071)
chr8 (256-308)||(828825-828877)
chr8 (256-308)||(5236724-5236776)
chr8 (313-349)||(11543093-11543129)
chr8 (14-53)||(17283559-17283599)
chr8 (78-138)||(20708193-20708253)
chr8 (78-142)||(21199866-21199930)
chr8 (263-303)||(22888690-22888729)
chr8 (256-308)||(24547753-24547805)
chr8 (313-353)||(37609946-37609986)
[»] scaffold0022 (8 HSPs)
scaffold0022 (169-353)||(106466-106650)
scaffold0022 (238-347)||(130391-130501)
scaffold0022 (256-353)||(6681-6780)
scaffold0022 (82-142)||(106612-106672)
scaffold0022 (9-74)||(107909-107975)
scaffold0022 (9-47)||(114112-114150)
scaffold0022 (9-45)||(106718-106755)
scaffold0022 (257-302)||(108113-108158)
[»] chr2 (59 HSPs)
chr2 (169-353)||(25304001-25304187)
chr2 (144-353)||(23823064-23823275)
chr2 (144-353)||(23825008-23825219)
chr2 (169-353)||(4832-5018)
chr2 (171-353)||(23832143-23832327)
chr2 (172-353)||(24296128-24296311)
chr2 (170-353)||(19670686-19670868)
chr2 (257-353)||(19658471-19658568)
chr2 (257-353)||(24088917-24089014)
chr2 (257-353)||(43641348-43641445)
chr2 (256-353)||(25600481-25600579)
chr2 (257-353)||(19435014-19435111)
chr2 (256-353)||(6877963-6878061)
chr2 (256-353)||(22862008-22862106)
chr2 (256-353)||(8886661-8886759)
chr2 (9-75)||(22654339-22654405)
chr2 (257-349)||(22137375-22137468)
chr2 (257-349)||(24272580-24272673)
chr2 (283-353)||(27260130-27260201)
chr2 (9-74)||(7319718-7319783)
chr2 (257-349)||(18534351-18534444)
chr2 (266-353)||(15631927-15632015)
chr2 (9-88)||(24089195-24089275)
chr2 (9-71)||(32040-32102)
chr2 (256-302)||(36892358-36892404)
chr2 (77-142)||(23823212-23823277)
chr2 (77-142)||(23825156-23825221)
chr2 (113-164)||(22654433-22654484)
chr2 (256-303)||(25877615-25877662)
chr2 (172-280)||(16294374-16294484)
chr2 (256-353)||(22273413-22273513)
chr2 (256-353)||(22282646-22282746)
chr2 (9-72)||(22581795-22581858)
chr2 (9-72)||(24573257-24573320)
chr2 (9-44)||(25600173-25600208)
chr2 (9-47)||(4450133-4450171)
chr2 (9-47)||(25877844-25877882)
chr2 (257-302)||(22691605-22691650)
chr2 (257-302)||(22696252-22696297)
chr2 (9-44)||(28972272-28972307)
chr2 (9-47)||(269422-269460)
chr2 (256-353)||(43644507-43644605)
chr2 (257-302)||(4449883-4449928)
chr2 (257-302)||(7319946-7319991)
chr2 (9-45)||(19670970-19671007)
chr2 (9-45)||(24296382-24296419)
chr2 (256-308)||(5889872-5889924)
chr2 (256-308)||(11232827-11232879)
chr2 (256-308)||(14908014-14908066)
chr2 (78-138)||(16294453-16294513)
chr2 (256-304)||(21140405-21140453)
chr2 (256-304)||(21276107-21276155)
chr2 (256-308)||(22514674-22514726)
chr2 (256-308)||(22692818-22692870)
chr2 (256-308)||(22697465-22697517)
chr2 (9-44)||(23823315-23823351)
chr2 (9-44)||(23825259-23825295)
chr2 (9-45)||(24966425-24966461)
chr2 (256-308)||(28777275-28777327)
[»] scaffold0053 (1 HSPs)
scaffold0053 (185-353)||(78379-78548)
[»] chr1 (54 HSPs)
chr1 (151-353)||(38035167-38035371)
chr1 (223-353)||(13378307-13378438)
chr1 (173-353)||(36357883-36358065)
chr1 (169-353)||(19601616-19601801)
chr1 (256-353)||(35053361-35053459)
chr1 (256-349)||(21193689-21193783)
chr1 (256-353)||(37235507-37235605)
chr1 (256-353)||(5676147-5676245)
chr1 (262-353)||(41217978-41218070)
chr1 (258-349)||(5769764-5769856)
chr1 (275-353)||(8539505-8539584)
chr1 (275-353)||(8604744-8604823)
chr1 (238-349)||(41213217-41213329)
chr1 (9-73)||(51658191-51658255)
chr1 (248-349)||(5471933-5472036)
chr1 (257-349)||(20821477-20821570)
chr1 (257-349)||(22144942-22145035)
chr1 (256-353)||(37846012-37846110)
chr1 (256-353)||(20444266-20444364)
chr1 (82-142)||(38035315-38035375)
chr1 (257-301)||(22407893-22407937)
chr1 (257-301)||(49966108-49966152)
chr1 (256-353)||(20929999-20930099)
chr1 (9-74)||(20956820-20956886)
chr1 (256-301)||(2422732-2422777)
chr1 (256-301)||(9785898-9785943)
chr1 (257-302)||(20956625-20956670)
chr1 (256-353)||(22226509-22226606)
chr1 (257-302)||(22836909-22836954)
chr1 (82-142)||(36358031-36358091)
chr1 (257-302)||(77630-77676)
chr1 (259-301)||(18505814-18505856)
chr1 (9-74)||(22837195-22837260)
chr1 (9-42)||(9786282-9786315)
chr1 (256-301)||(20895389-20895434)
chr1 (256-328)||(15862991-15863063)
chr1 (256-353)||(22352654-22352753)
chr1 (9-44)||(20252342-20252377)
chr1 (256-353)||(20530030-20530129)
chr1 (9-44)||(22080190-22080225)
chr1 (9-44)||(41217544-41217579)
chr1 (169-250)||(18164603-18164685)
chr1 (9-47)||(21716430-21716468)
chr1 (256-302)||(27673311-27673357)
chr1 (9-47)||(35524312-35524350)
chr1 (257-302)||(21716664-21716709)
chr1 (9-45)||(22837426-22837463)
chr1 (9-85)||(27673107-27673183)
chr1 (257-302)||(35524080-35524125)
chr1 (9-45)||(36358137-36358174)
chr1 (9-45)||(38035421-38035458)
chr1 (256-328)||(44036462-44036537)
chr1 (256-308)||(17003352-17003404)
chr1 (256-308)||(35935158-35935210)
[»] chr7 (60 HSPs)
chr7 (169-353)||(15913978-15914167)
chr7 (188-353)||(13388419-13388586)
chr7 (169-353)||(13376107-13376292)
chr7 (257-353)||(9058178-9058275)
chr7 (257-353)||(26071809-26071906)
chr7 (257-353)||(26095596-26095693)
chr7 (256-352)||(12753404-12753501)
chr7 (256-353)||(3893618-3893716)
chr7 (256-353)||(45453801-45453896)
chr7 (258-353)||(112840-112939)
chr7 (257-349)||(9322614-9322707)
chr7 (257-349)||(20587160-20587253)
chr7 (238-349)||(8565128-8565240)
chr7 (9-74)||(15629004-15629069)
chr7 (9-74)||(49049658-49049723)
chr7 (248-349)||(28718969-28719071)
chr7 (9-75)||(45455515-45455581)
chr7 (9-75)||(13868014-13868080)
chr7 (257-308)||(4483269-4483320)
chr7 (9-74)||(13272976-13273041)
chr7 (256-353)||(15761903-15762000)
chr7 (257-301)||(44863668-44863712)
chr7 (258-301)||(142094-142137)
chr7 (258-353)||(3058582-3058677)
chr7 (144-280)||(9641448-9641586)
chr7 (9-75)||(12545736-12545802)
chr7 (257-299)||(15824105-15824147)
chr7 (9-75)||(16571987-16572053)
chr7 (9-75)||(16593609-16593675)
chr7 (256-353)||(1938313-1938410)
chr7 (257-301)||(13867687-13867731)
chr7 (256-302)||(12545402-12545449)
chr7 (9-47)||(7286484-7286522)
chr7 (256-302)||(11285671-11285717)
chr7 (9-47)||(18305793-18305831)
chr7 (256-353)||(32496089-32496189)
chr7 (9-56)||(11285348-11285396)
chr7 (9-44)||(141869-141904)
chr7 (9-44)||(2024692-2024727)
chr7 (9-44)||(3893381-3893416)
chr7 (9-44)||(12249908-12249943)
chr7 (9-44)||(15824336-15824371)
chr7 (9-44)||(47287976-47288011)
chr7 (290-353)||(125391-125456)
chr7 (9-47)||(12753172-12753210)
chr7 (257-302)||(21676631-21676677)
chr7 (9-75)||(44863443-44863509)
chr7 (9-45)||(13376002-13376039)
chr7 (257-302)||(49049450-49049495)
chr7 (256-308)||(7821456-7821508)
chr7 (256-308)||(7828767-7828819)
chr7 (78-138)||(9641447-9641507)
chr7 (257-301)||(12249770-12249814)
chr7 (256-300)||(13038809-13038853)
chr7 (256-353)||(18255356-18255455)
chr7 (256-308)||(27103126-27103178)
chr7 (256-308)||(27110474-27110526)
chr7 (256-308)||(27175148-27175200)
chr7 (256-308)||(38785218-38785270)
chr7 (257-301)||(47288201-47288245)
[»] scaffold0016 (3 HSPs)
scaffold0016 (169-353)||(118151-118335)
scaffold0016 (256-302)||(163857-163903)
scaffold0016 (9-45)||(118403-118440)
[»] scaffold0013 (1 HSPs)
scaffold0013 (169-353)||(33904-34091)
[»] scaffold0507 (1 HSPs)
scaffold0507 (169-353)||(4899-5082)
[»] scaffold0028 (4 HSPs)
scaffold0028 (169-353)||(78121-78300)
scaffold0028 (9-47)||(90980-91018)
scaffold0028 (256-301)||(90599-90644)
scaffold0028 (256-308)||(128917-128969)
[»] scaffold0021 (4 HSPs)
scaffold0021 (257-353)||(138352-138449)
scaffold0021 (9-73)||(9876-9940)
scaffold0021 (256-302)||(76809-76855)
scaffold0021 (9-44)||(76589-76624)
[»] scaffold0396 (3 HSPs)
scaffold0396 (256-353)||(13736-13834)
scaffold0396 (9-44)||(14119-14154)
scaffold0396 (256-353)||(15972-16071)
[»] scaffold0327 (2 HSPs)
scaffold0327 (169-353)||(4466-4649)
scaffold0327 (9-45)||(4327-4364)
[»] scaffold0434 (1 HSPs)
scaffold0434 (256-353)||(3181-3279)
[»] scaffold0068 (2 HSPs)
scaffold0068 (256-353)||(60096-60194)
scaffold0068 (9-44)||(59865-59900)
[»] scaffold0243 (1 HSPs)
scaffold0243 (257-353)||(3841-3938)
[»] scaffold0031 (3 HSPs)
scaffold0031 (257-353)||(68850-68947)
scaffold0031 (12-47)||(68597-68632)
scaffold0031 (9-62)||(30314-30367)
[»] scaffold0462 (2 HSPs)
scaffold0462 (256-353)||(4651-4749)
scaffold0462 (9-45)||(4425-4461)
[»] scaffold0083 (2 HSPs)
scaffold0083 (256-353)||(12720-12818)
scaffold0083 (9-44)||(12488-12523)
[»] scaffold0622 (1 HSPs)
scaffold0622 (257-353)||(7955-8052)
[»] scaffold0240 (2 HSPs)
scaffold0240 (257-353)||(6069-6166)
scaffold0240 (9-56)||(5845-5892)
[»] scaffold0102 (1 HSPs)
scaffold0102 (257-353)||(37985-38082)
[»] scaffold0447 (2 HSPs)
scaffold0447 (257-353)||(3148-3245)
scaffold0447 (9-44)||(2475-2510)
[»] scaffold0395 (2 HSPs)
scaffold0395 (257-353)||(14201-14298)
scaffold0395 (9-75)||(13964-14030)
[»] scaffold0383 (3 HSPs)
scaffold0383 (257-353)||(5756-5853)
scaffold0383 (9-44)||(5339-5374)
scaffold0383 (256-308)||(899-951)
[»] scaffold0193 (1 HSPs)
scaffold0193 (257-353)||(3280-3377)
[»] scaffold0190 (2 HSPs)
scaffold0190 (257-353)||(8601-8698)
scaffold0190 (9-47)||(8387-8425)
[»] scaffold0120 (2 HSPs)
scaffold0120 (257-353)||(27097-27194)
scaffold0120 (9-54)||(26873-26918)
[»] scaffold0080 (1 HSPs)
scaffold0080 (257-353)||(25158-25255)
[»] scaffold0004 (3 HSPs)
scaffold0004 (257-349)||(84943-85036)
scaffold0004 (238-349)||(26062-26174)
scaffold0004 (256-353)||(197636-197733)
[»] scaffold0786 (2 HSPs)
scaffold0786 (235-349)||(191-305)
scaffold0786 (235-349)||(5246-5360)
[»] scaffold0051 (2 HSPs)
scaffold0051 (256-353)||(56461-56559)
scaffold0051 (9-75)||(56206-56272)
[»] scaffold0390 (1 HSPs)
scaffold0390 (257-349)||(3800-3893)
[»] scaffold0012 (1 HSPs)
scaffold0012 (256-353)||(249081-249182)
[»] scaffold0138 (5 HSPs)
scaffold0138 (254-353)||(23972-24065)
scaffold0138 (9-52)||(15228-15271)
scaffold0138 (9-44)||(26451-26486)
scaffold0138 (256-301)||(15005-15050)
scaffold0138 (9-45)||(24243-24280)
[»] scaffold1068 (1 HSPs)
scaffold1068 (169-279)||(1676-1787)
[»] scaffold0009 (2 HSPs)
scaffold0009 (256-353)||(236703-236801)
scaffold0009 (256-353)||(270649-270749)
[»] scaffold0808 (1 HSPs)
scaffold0808 (9-74)||(3330-3395)
[»] scaffold0346 (1 HSPs)
scaffold0346 (257-349)||(14162-14255)
[»] scaffold0700 (1 HSPs)
scaffold0700 (169-280)||(1016-1128)
[»] scaffold0020 (2 HSPs)
scaffold0020 (169-280)||(104377-104489)
scaffold0020 (79-142)||(104352-104415)
[»] scaffold0467 (1 HSPs)
scaffold0467 (256-353)||(11566-11663)
[»] scaffold0338 (2 HSPs)
scaffold0338 (12-92)||(6984-7064)
scaffold0338 (256-302)||(7254-7300)
[»] scaffold0025 (2 HSPs)
scaffold0025 (256-353)||(145060-145159)
scaffold0025 (256-353)||(147319-147418)
[»] scaffold0121 (1 HSPs)
scaffold0121 (9-56)||(7299-7346)
[»] scaffold0165 (3 HSPs)
scaffold0165 (172-280)||(28535-28645)
scaffold0165 (172-280)||(20551-20661)
scaffold0165 (78-138)||(20522-20582)
[»] scaffold0037 (3 HSPs)
scaffold0037 (256-302)||(26414-26460)
scaffold0037 (290-353)||(70939-71003)
scaffold0037 (256-294)||(66322-66360)
[»] scaffold0011 (1 HSPs)
scaffold0011 (256-302)||(256558-256604)
[»] scaffold0292 (2 HSPs)
scaffold0292 (256-301)||(18107-18152)
scaffold0292 (9-56)||(17735-17782)
[»] scaffold0253 (1 HSPs)
scaffold0253 (9-73)||(4067-4132)
[»] scaffold0673 (1 HSPs)
scaffold0673 (257-301)||(3706-3750)
[»] scaffold0073 (1 HSPs)
scaffold0073 (266-349)||(55922-56006)
[»] scaffold0001 (2 HSPs)
scaffold0001 (9-56)||(75680-75727)
scaffold0001 (256-302)||(72104-72150)
[»] scaffold1753 (1 HSPs)
scaffold1753 (266-353)||(1-90)
[»] scaffold0597 (1 HSPs)
scaffold0597 (256-353)||(2663-2763)
[»] scaffold0483 (2 HSPs)
scaffold0483 (256-353)||(4282-4382)
scaffold0483 (9-44)||(4796-4831)
[»] scaffold0269 (3 HSPs)
scaffold0269 (256-353)||(607-707)
scaffold0269 (9-47)||(3055-3093)
scaffold0269 (257-301)||(3475-3519)
[»] scaffold0184 (1 HSPs)
scaffold0184 (256-353)||(32724-32824)
[»] scaffold0109 (2 HSPs)
scaffold0109 (256-353)||(49122-49222)
scaffold0109 (9-44)||(49636-49671)
[»] scaffold0092 (1 HSPs)
scaffold0092 (9-71)||(1652-1714)
[»] scaffold0078 (1 HSPs)
scaffold0078 (256-353)||(40020-40120)
[»] scaffold0049 (2 HSPs)
scaffold0049 (9-47)||(30650-30688)
scaffold0049 (257-301)||(31047-31091)
[»] scaffold0692 (1 HSPs)
scaffold0692 (256-301)||(1045-1090)
[»] scaffold0171 (1 HSPs)
scaffold0171 (256-301)||(31260-31305)
[»] scaffold0116 (1 HSPs)
scaffold0116 (256-301)||(28283-28328)
[»] scaffold0032 (2 HSPs)
scaffold0032 (256-353)||(54169-54266)
scaffold0032 (256-353)||(109614-109713)
[»] scaffold0359 (2 HSPs)
scaffold0359 (257-301)||(13433-13477)
scaffold0359 (9-44)||(13705-13740)
[»] scaffold0039 (1 HSPs)
scaffold0039 (257-301)||(20905-20949)
[»] scaffold0008 (4 HSPs)
scaffold0008 (257-301)||(21085-21129)
scaffold0008 (9-44)||(20860-20895)
scaffold0008 (9-44)||(28450-28485)
scaffold0008 (257-300)||(28675-28718)
[»] scaffold0480 (1 HSPs)
scaffold0480 (257-300)||(7013-7056)
[»] scaffold0521 (1 HSPs)
scaffold0521 (9-55)||(6891-6937)
[»] scaffold0014 (1 HSPs)
scaffold0014 (9-75)||(144987-145053)
[»] scaffold0003 (2 HSPs)
scaffold0003 (256-353)||(217282-217381)
scaffold0003 (257-294)||(99652-99689)
[»] scaffold2147 (1 HSPs)
scaffold2147 (256-301)||(758-803)
[»] scaffold0750 (1 HSPs)
scaffold0750 (257-302)||(2837-2881)
[»] scaffold0225 (2 HSPs)
scaffold0225 (256-353)||(28350-28447)
scaffold0225 (256-353)||(14829-14926)
[»] scaffold0133 (1 HSPs)
scaffold0133 (169-280)||(3339-3452)
[»] scaffold0124 (1 HSPs)
scaffold0124 (257-302)||(26540-26584)
[»] scaffold0103 (1 HSPs)
scaffold0103 (257-302)||(32050-32095)
[»] scaffold1560 (1 HSPs)
scaffold1560 (256-328)||(1345-1417)
[»] scaffold0407 (1 HSPs)
scaffold0407 (258-302)||(6308-6352)
[»] scaffold0302 (1 HSPs)
scaffold0302 (256-353)||(4370-4469)
[»] scaffold0266 (1 HSPs)
scaffold0266 (256-353)||(5131-5230)
[»] scaffold0023 (2 HSPs)
scaffold0023 (9-65)||(92252-92308)
scaffold0023 (256-308)||(155929-155981)
[»] scaffold0450 (1 HSPs)
scaffold0450 (9-44)||(4690-4725)
[»] scaffold0191 (1 HSPs)
scaffold0191 (9-44)||(648-683)
[»] scaffold0158 (2 HSPs)
scaffold0158 (9-44)||(16376-16411)
scaffold0158 (9-44)||(23040-23075)
[»] scaffold0106 (2 HSPs)
scaffold0106 (9-52)||(37627-37670)
scaffold0106 (256-301)||(40054-40099)
[»] scaffold0342 (1 HSPs)
scaffold0342 (9-47)||(4078-4116)
[»] scaffold0601 (1 HSPs)
scaffold0601 (258-302)||(2576-2621)
[»] scaffold0589 (1 HSPs)
scaffold0589 (16-72)||(6123-6179)
[»] scaffold0076 (1 HSPs)
scaffold0076 (256-308)||(37818-37870)


Alignment Details
Target: scaffold0058 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 9 - 353
Target Start/End: Complemental strand, 72166 - 71825
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagta 108  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||||||||| || ||| ||    
T  72166 acatcatcataatccacataatagttaacatgaataattcatttcaaatatcatatacttaatcaatgataataataatacatgataacattttcaatta 72067  T
Q  109 tcacaaccaatcacccacaatcacaagtatgtcataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcga 208  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||||||||    ||||||||||||| || || |    
T  72066 tcaaaaccaatcacccacaatcacaagtatgtcataatattcatacatggtaacaaatttaaatatcacaaccaa----tcacaaccacaagtatgtcaa 71971  T
Q  209 tcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||| |||||||||||||||||||| |||||||    
T  71970 tcatttcacaattaggactcatgcaacaaatgatatgtccctaattatgacgcataaatgcctgtggtaccaaatcacctcaaggtcgtcacattcgatg 71871  T
Q  309 caac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||    
T  71870 caacaaaaacatcgtatgtaagatttcacaaccgtcttacataatc 71825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 190; Significance: 1e-103; HSPs: 4)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 9 - 353
Target Start/End: Complemental strand, 8539 - 8196
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagta 108  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||    
T  8539 acatcatcataatcaaaataacaattaacatgaataattcaattcaaatttcatatacttaatcaatgataataataatacatgataacagttccactta 8440  T
Q  109 tcacaaccaatcacccacaatcacaagtatgtcataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcga 208  Q
    |||||||| ||||||||||||||||||||||||||||||  |||| | |||||||| | |||||||||| ||||  ||  ||||| |||||| ||  | |    
T  8439 tcacaaccgatcacccacaatcacaagtatgtcataatatccatataagataacaattttaaatatcac-accagtcaaccacaatcacaagtatggcaa 8341  T
Q  209 tcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    | | |||||| || ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  8340 ttactccacagttaggactcatgcaac-aatgatatgtccctaatcatgacgcataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 8242  T
Q  309 caac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||| ||||||||||| ||||||||||||||||| ||||||    
T  8241 caacaaaaatatcgtatgtaagatttcacacccgtcttagataatc 8196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 9 - 353
Target Start/End: Complemental strand, 13928 - 13585
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagta 108  Q
    |||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||    
T  13928 acatcatcataatcaaaataacaattaacatgaataattcaattcaaatttcatatacttaatcaatgataataataatacatgataacagttccactta 13829  T
Q  109 tcacaaccaatcacccacaatcacaagtatgtcataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcga 208  Q
    |||||||| ||||||||||||||||||||||||||||||  |||| | |||||||| | |||||||||| ||||  ||  ||||| |||||| ||  | |    
T  13828 tcacaaccgatcacccacaatcacaagtatgtcataatatccatataagataacaattttaaatatcac-accagtcaaccacaatcacaagtatggcaa 13730  T
Q  209 tcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    | | |||||| || ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  13729 ttactccacagttaggactcatgcaac-aatgatatgtccctaatcatgacgcataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 13631  T
Q  309 caac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||| ||||||||||| ||||||||||||||||| ||||||    
T  13630 caacaaaaatatcgtatgtaagatttcacacccgtcttagataatc 13585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 17827 - 17927
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcac--cttcgatgcaacaaaa-catcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||  |||||| ||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  17827 tgacacattaatgcatttggtaccaaatcacctcaaggtcgtcacgccttcgatgcaacaaaaacatcgtatgtaagagttcacacccgtcttacataat 17926  T
Q  353 c 353  Q
    |    
T  17927 c 17927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 19911 - 20011
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcac--cttcgatgcaacaaaa-catcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||  |||||| ||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  19911 tgacacattaatgcatttggtaccaaatcacctcaaggtcgtcacgccttcgatgcaacaaaaacatcgtatgtaagagttcacacccgtcttacataat 20010  T
Q  353 c 353  Q
    |    
T  20011 c 20011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 9 - 353
Target Start/End: Complemental strand, 2511 - 2168
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagta 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||    
T  2511 acatcatcataatccacataacagttaacatgaataattcaatccaaatttcatatacttaatcaatgataataataatacatgataacagttccactta 2412  T
Q  109 tcacaaccaatcacccacaatcacaagtatgtcataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcga 208  Q
    |||||||| ||||||||||||||||||||||||||||||  |||| | |||||||| | |||||||||| ||||  ||  ||||| |||||| ||  | |    
T  2411 tcacaaccgatcacccacaatcacaagtatgtcataatatccatataagataacaattttaaatatcac-accattcatccacaatcacaagtatggcaa 2313  T
Q  209 tcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    | | ||||||||| || ||||||| || ||||||||||||||||||||||  |||| ||||||||||||||| ||||||||||| ||||||||||||||     
T  2312 ttactccacaattagggctcatgccac-aatgatatgtccctaatcatgatgcataaatgcatgtggtaccggatcacctcaagatcgtcaccttcgatt 2214  T
Q  309 caac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  2213 caacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 2168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 6e-99; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 107 - 352
Target Start/End: Original strand, 33323189 - 33323434
Alignment:
Q  107 tatcacaaccaatcacccacaatcacaagtatgtcataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatc 206  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||  || ||    
T  33323189 tatcacaaccaatcacccacaatcacaagtatgccataataatcatacatgataacaaatctaaatatcacaatcaatcactcacaaccacaaatatgtc 33323288  T
Q  207 gatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcga 306  Q
     ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  33323289 aatcattccacaatcgggactcatgcaac-aatgatatgtccctaatcatgacacataaatgcatttggtaccgaatcacctcaaggtcgtcaccttcga 33323387  T
Q  307 tgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||    
T  33323388 tgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataat 33323434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 33323040 - 33323178
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagta 108  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  33323040 acatcatcataatccacacaacagttaacatgaataatttaattcaaatttcatatacttaatcaatgatgttaataatacatgataacaattccaagta 33323139  T
Q  109 tcacaaccaatcacccacaatcacaagtatgtcataata 147  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  33323140 tcacaaccaatcacccacaatcacaagcatgtcataata 33323178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 18383416 - 18383230
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| ||||| |||||||||| ||  | || |||||||| || |||||||||| ||||| |||||||||||||| ||||||||||| ||    
T  18383416 aaatatcacaaccaatcactcgcaaccacaagtatgccaattattccacatttaggactcatgcgacaaaatgatatgtccctaaacatgacacataaat 18383317  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  18383316 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacattgtatgtaagatttcacacccgtcttacataatc 18383230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 172 - 353
Target Start/End: Complemental strand, 16889473 - 16889293
Alignment:
Q  172 tatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcat 271  Q
    ||||||| ||||| | ||||||||||||| || || || ||| ||||  |  |||||||||||||| ||||||||||||||||||||||||||  |||||    
T  16889473 tatcacatccaaatattcacaaccacaagtatgtcaattatttcacatataagactcatgcaacaa-tgatatgtccctaatcatgacacataagtgcat 16889375  T
Q  272 gtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  16889374 gtggtaccgaatcacctccaggtcgtcaccttcgatgcatcaacacatcgtatgtaagatttcacacccgtcttacataatc 16889293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 17790870 - 17790689
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatg 268  Q
    |||||||||| ||||| | ||||||||||||| || || || ||| ||||  | ||||||||||||||| |||||||||||||||||| ||||| ||  |    
T  17790870 aaatatcacacccaaatattcacaaccacaagtatgtcaattatttcacatataggactcatgcaacaa-tgatatgtccctaatcataacacagat--g 17790774  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||    
T  17790773 catgtggtaccgaatcacctctaggtcgtcaccttcgatgcatcaacacatcgtatataagatttcacacccgtcttacataatc 17790689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 16105083 - 16105181
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16105083 tgacacataaatgcatgtggtaccggataacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 16105181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 22428700 - 22428798
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  22428700 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtacgatttcacacccgtcttacataatc 22428798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 18775736 - 18775834
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  18775736 tgacacataaatgcatgtggtaccggatcacctcaaagtcgtcaccttcgatacaacaaagacatcgtatgtaagatttcacacccgtcttacataatc 18775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 34965471 - 34965564
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||    
T  34965471 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaatatcgtatgtaagatttcacatccgtcttacat 34965564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 31626964 - 31627061
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||  |||||||||||||    
T  31626964 gacacatacatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcatatgtaagatttcacacatgtcttacataatc 31627061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 25745942 - 25745844
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| | |||||||| |||||||||||||    
T  25745942 tgacacataaattcatgtggtaccaaatcacctcaaggtcgtcaccctcgatgcaacaaaaacatcgtatgtaagagttcacacctgtcttacataatc 25745844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 19852777 - 19852889
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||  |||||||  ||||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||||||| ||||||| |||||||    
T  19852777 atgatatgcgcctaatcccgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcac 19852876  T
Q  337 acccgtcttacat 349  Q
    || ||||||||||    
T  19852877 actcgtcttacat 19852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 16083970 - 16084039
Alignment:
Q  285 acctcaaggtcgtcaccttcgatgcaacaaaa-catcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  16083970 acctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 16084039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 22846651 - 22846752
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaa-----catcgtatgtaatatttcacacccgtcttacataa 351  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||      ||||||||||| |||||||| |||||||||||||    
T  22846651 gacacatatatgcatgtagtaccaaatcaccgcaaggtcgtcaccttcgatgcaacaaaaacatcgatcgtatgtaagatttcacatccgtcttacataa 22846750  T
Q  352 tc 353  Q
    ||    
T  22846751 tc 22846752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 31469282 - 31469169
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatata 266  Q
    ||||||||||||||| |||||||||||||||| ||||| || | |||||||||| |||||||||| |||| ||||||||||||||  || |||||||| |    
T  31469282 aaatatcacaaccaatcactcacaaccacaagtatatcaattatttccacaattaggactcatgccacaatatgatatgtccctagacacgacacataaa 31469183  T
Q  267 tgcatgtggtaccg 280  Q
    |||||| |||||||    
T  31469182 tgcatgcggtaccg 31469169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 35137565 - 35137496
Alignment:
Q  285 acctcaaggtcgtcaccttcgatgcaacaaaa-catcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  35137565 acctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccatcttacataatc 35137496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 173 - 280
Target Start/End: Original strand, 6092955 - 6093062
Alignment:
Q  173 atcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatg 272  Q
    ||||||||||| |||||||| ||||| | || || || ||| |||| || ||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  6092955 atcacaaccaatcactcacatccacatgtatgtcaattatttcacatttaggactcatgcaacaaatgatacgtcccaaatcatgacacataaatgcatg 6093054  T
Q  273 tggtaccg 280  Q
     |||||||    
T  6093055 cggtaccg 6093062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 16134812 - 16134898
Alignment:
Q  264 atatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||||||||||| ||||||||||||||| |||||   |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  16134812 atatgcatgtggtaccaaatcacctcaaggtcttcacccatgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacat 16134898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 23220204 - 23220313
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||  |||||||  ||||||||||||||||||||||| ||||||||||||||||| | |   |||||||| |||||||| ||||||| |||||||    
T  23220204 atgatatgcgcctaatcccgacacatatatgcatgtggtaccaaatcacctcaaggtcgttatccatgatgcaacaaaaacatcatatgtaagatttcac 23220303  T
Q  337 acccgtctta 346  Q
    | ||||||||    
T  23220304 atccgtctta 23220313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 19670910 - 19671023
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatata 266  Q
    ||||||||||||||| |||||||| ||||||| ||||| || | || ||||||| |||||||||| |||| ||||||||||||||  || |||||||| |    
T  19670910 aaatatcacaaccaatcactcacatccacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgtccctagacacgacacataaa 19671009  T
Q  267 tgcatgtggtaccg 280  Q
    |||||| |||||||    
T  19671010 tgcatgcggtaccg 19671023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 19984834 - 19984735
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa--acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||  ||  ||||||||||||||||||| ||||||  |||||||||||||   |||||||||| |||||||||||    
T  19984834 tgacacataaatgcatgtggtaccaaatatccaaaaggtcgtcaccttcgatggaacaaatcacatcgtatgtaagggttcacacccgccttacataatc 19984735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 1554375 - 1554472
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||| |||||||||||||| |||| ||  |||||||||||||||||||  | || |||||||||||||   |||||||||| |||||||||||    
T  1554375 tgacgcataaatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaacacatcgtatgtaagggttcacacccgccttacataatc 1554472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 18422260 - 18422304
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  18422260 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 18422304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 32896282 - 32896329
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaa 56  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  32896282 acatcatcataatccaaataacagttaccatgaataatttaattcaaa 32896329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 15738496 - 15738562
Alignment:
Q  23 cacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaatgacaataataata 88  Q
    |||||||||||||| ||||||||||| ||||||||| |||| |||||||||||| | ||||||||||    
T  15738496 cacataacagttaaacatgaataattcaattcaaatatcatgtacttaatcaattataataataata 15738562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25369295 - 25369229
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaa 74  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||| | |||| |||||||||||    
T  25369295 acatcatcataatcgacataacagttaaacatgaataattcaattcaattatcatgtacttaatcaa 25369229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 25646562 - 25646517
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  25646562 tgacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 25646517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 35017347 - 35017302
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  35017347 tgacacatatatgcatgtggtaccaaatcacctcagggtcgtcacc 35017302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 18128805 - 18128908
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc-----ttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||| ||| |||||||||||||| ||||||||| || ||||||||     |||||||| ||   |||||||||||||| |||||||||| |||||||||    
T  18128805 tgacatataaatgcatgtggtaccaaatcacctccagttcgtcaccttcgattcgatgccacttgaacatcgtatgtaagatttcacacctgtcttacat 18128904  T
Q  350 aatc 353  Q
    ||||    
T  18128905 aatc 18128908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 940971 - 940913
Alignment:
Q  15 tcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatc 72  Q
    |||||||||||||| ||||||  ||||||||||| ||||||||| ||||||||||||||    
T  940971 tcataatccacatagcagttaggcatgaataattcaattcaaatatcatatacttaatc 940913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 16104850 - 16104888
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  16104850 acatcatcataatccaaataacagttaacatgaataatt 16104888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 21930418 - 21930464
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctc-aaggtcgtcacct 302  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  21930418 gacacatatatgcatgtggtaccaaatcacctcaaaggtcgtcacct 21930464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 22428473 - 22428538
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    |||||||||||||||| ||||||||||||||||||| || |||| |||  |||| ||||| |||||    
T  22428473 acatcatcataatccaaataacagttaacatgaatatttcaatttaaacatcatgtacttgatcaa 22428538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 1659337 - 1659265
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaa 328  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  | || |||||||||||||    
T  1659337 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaa 1659265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 13623121 - 13623085
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataa 45  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13623121 acatcatcataatccaaataacagttaacatgaataa 13623085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 15861267 - 15861339
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaa 328  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  | || |||||||||||||    
T  15861267 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaa 15861339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 33316210 - 33316158
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  ||||||||||||||||||||    
T  33316210 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcaccttcgatg 33316158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 7829764 - 7829717
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataatttaattcaa 55  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||    
T  7829764 acatcatcataatccacataacagttagacatgaataaatcaattcaa 7829717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 18128340 - 18128375
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  18128340 acatcatcataatccaaataacagttaacatgaata 18128375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 302
Target Start/End: Original strand, 18397397 - 18397436
Alignment:
Q  263 tatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  18397397 tatatgcatgtggtaccatatcacctcaaggtcgtcacct 18397436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 18843900 - 18843857
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaatt 52  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||    
T  18843900 acattatcataatccaaataacagttaacatgaatattttaatt 18843857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 33323226 - 33323289
Alignment:
Q  79 aataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||| |||||||||||||| || || |||||||| ||||||| ||||| ||||| |||||||    
T  33323226 aataatcatacatgataacaaatctaaatatcacaatcaatcactcacaaccacaaatatgtca 33323289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 35011316 - 35011281
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  35011316 acatcatcataatccaaataacagttaacatgaata 35011281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 35017645 - 35017610
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  35017645 acatcatcataatccaaataacagttaacatgaata 35017610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 16238898 - 16238996
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacc-tcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||  |||| ||   ||||||||||||| |||||  | || |||||||||||||   ||||| |||| |||||||||||    
T  16238898 tgacacatatatgcatgtggtacaaaatctccaaaaaggtcgtcacctccgatgataaaacacatcgtatgtaagggttcacccccgccttacataatc 16238996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 23151706 - 23151772
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||||||||||||||| |||||||||| |||| ||| || ||||||||  |||| ||||| ||||||    
T  23151706 acatcatcataatccaaataacagttagcatggatatttcaattcaaacatcatgtacttgatcaat 23151772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 353
Target Start/End: Original strand, 23151845 - 23151883
Alignment:
Q  315 aacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  23151845 aacatcgtatgtaagagttcacacccgtcttacataatc 23151883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 25746160 - 25746122
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  25746160 acatcatcataatcaaaataacagttaacatgaataatt 25746122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 13016479 - 13016434
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||| ||||||||||||||||  |||| ||||||||||||||||    
T  13016479 gacacaaatatgcatgtggtaccatatcatctcaaggtcgtcacct 13016434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 15738714 - 15738759
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||| |||||||||||||| |||||| |||| ||||||||||    
T  15738714 gacacatacatgcatgtggtaccaaatcacttcaacgtcgtcacct 15738759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 33323112 - 33323169
Alignment:
Q  146 taatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcat 203  Q
    |||| |||||||||||||| || || |||||||||||| ||| ||||| |||||||||    
T  33323112 taataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagcat 33323169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 940837 - 940757
Alignment:
Q  170 aatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaa-atgatatgtccc 249  Q
    |||||||||||||| || ||||| ||||| | || || |||||| |||| ||  |||||||||||||| ||||||||||||    
T  940837 aatatcacaaccaatcattcacatccacatgtatgtcaatcatttcacatttatgactcatgcaacaatatgatatgtccc 940757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 1651576 - 1651524
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  1651576 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 1651524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 10487414 - 10487466
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  10487414 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 10487466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 16374963 - 16374999
Alignment:
Q  313 aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  16374963 aaaacatcatatgtaagatttcacacccgtcttacat 16374999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 16377913 - 16377861
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  16377913 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 16377861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 16385237 - 16385185
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  16385237 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 16385185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 16827506 - 16827454
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  16827506 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 16827454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 16889657 - 16889621
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaata 44  Q
    ||||||||||||||||||||||||||| |||||||||    
T  16889657 acatcatcataatccacataacagttatacatgaata 16889621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 79 - 353
Target Start/End: Complemental strand, 55442586 - 55442308
Alignment:
Q  79 aataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtcataataatcatacatgataacaagtctaaatatcaca 178  Q
    |||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| | || ||||||||    
T  55442586 aataataatacatgataacaatccaaattatcacaaccattcacccacaatcacaagtatgtcatgatattcatacatgataacaaatttatatatcaca 55442487  T
Q  179 accaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatgtggtac 278  Q
    | ||| |||||||||||| ||| ||||| |||||||||  ||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  55442486 atcaatcactcacaaccataagtatatcaatcattccatcattaggacttatgcaacaaatgttatgtccctaatcatgacacataaatgcatgtggtac 55442387  T
Q  279 cgaatcacctcaaggt---cgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |  |||||||||||||   |||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  55442386 cagatcacctcaaggtcgtcgtcaccttcaatgcaacaaaaacatcgtatgtaagatttcacacccgccttacataatc 55442308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 12490465 - 12490279
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||| || |||||||||||||||| || ||||||||| | ||||||||||| ||    
T  12490465 aaatatcacaaccaaacactcacaaccacaagtatgtcaatcattccacatttaggactcatgcaacaaaatgttatgtcccttaacatgacacataaat 12490366  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12490365 gcatgtggtaccgaatcatctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 12490279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 11330735 - 11330550
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatg 268  Q
    ||||||||||||||| |||||||||||||||| || || |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  11330735 aaatatcacaaccaatcactcacaaccacaagtatgtcaatcatttcacaattaggactcatgcaacaaatgatatatccctaatcatgacacataaatg 11330636  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||| |||||||||||| |||||||| |||||||| |||||||||||||||| |||||||||  |||||||||||||    
T  11330635 catgtggtaccgagtcacctcaaggttgtcacctttgatgcaacaaaaacatcgtatgtaagatttcacacatgtcttacataatc 11330550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 48420104 - 48420290
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||| ||| |||||||||||||||| || || ||||||||||| ||  ||||||||||||||| || ||||||||||| ||||||||||| ||    
T  48420104 aaatatcacaatcaatcactcacaaccacaagtatgtcaatcattccacatttatgactcatgcaacaaaatgttatgtccctaaacatgacacataaat 48420203  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  48420204 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaatatcgtatgtaagatttcacacccgtcttacataatc 48420290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 191 - 353
Target Start/End: Original strand, 15874619 - 15874783
Alignment:
Q  191 caaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctc 289  Q
    |||||||||| || || ||||||||||| || |||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  15874619 caaccacaagtatgtcaatcattccacatttaggactcatgcaacaaaatgttatgtccctaaacatgacacataaatgcatgtggtaccgaatcacctc 15874718  T
Q  290 aaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15874719 aaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 15874783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 18008865 - 18008679
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||| ||| ||||||||| |||||| || || |||||||||||  | |||||||||||||||| || ||||| ||||| |||||| |||| ||    
T  18008865 aaatatcacaaacaatcactcacaatcacaagtatgtcaatcattccacatctaggactcatgcaacaaaatgttatgttcctaaacatgacgcataaat 18008766  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18008765 gcatgtggtactgaatcacctcaaggtcgtcaccttcaatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 18008679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 5229720 - 5229627
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  5229720 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacat 5229627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 38812634 - 38812538
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38812634 gacacatatatgcatgtcgtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaatatttcac-cccgtcttacataatc 38812538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 47983419 - 47983516
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacaccc-gtcttacataat 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||    
T  47983419 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaacagatcgtatgtaagatttcacacccggtcttacataat 47983516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 47992706 - 47992803
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacaccc-gtcttacataat 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||    
T  47992706 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaacagatcgtatgtaagatttcacacccggtcttacataat 47992803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 48001993 - 48002090
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacaccc-gtcttacataat 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||    
T  48001993 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaacagatcgtatgtaagatttcacacccggtcttacataat 48002090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 48011279 - 48011376
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacaccc-gtcttacataat 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||    
T  48011279 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaacagatcgtatgtaagatttcacacccggtcttacataat 48011376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 12351484 - 12351386
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  12351484 tgacacataaatgcatgtggtactggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacactcgtcttacataatc 12351386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 50113766 - 50113668
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaa-caaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| |||||||    
T  50113766 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaataaaaacatcgtatgtaagatttcacacccgtcttgcataatc 50113668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 319252 - 319155
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  319252 tgacacataaatgcatgtggtaccagatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagagttcacacccgtcttacataat 319155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 7852329 - 7852426
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||    
T  7852329 gacacatacatgcatgtgataccaaatcacctcaaggtcgtcaccttcgatccaacaaaaacatcgtatgtaagatttcacactcgtcttacataatc 7852426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 47786508 - 47786411
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||| |||   ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  47786508 gacacatatatgcatgtgttactatatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacatccgtcttacataatc 47786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 55443748 - 55443672
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataata 85  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||    
T  55443748 acatcatcataatccacataacagttaacatgaatgattcaattcaaatttcatatacttaatcaatgttaataata 55443672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 33371005 - 33370914
Alignment:
Q  258 acacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||||||||||||||||| |||||||||||||||||||||   | |||||||||| ||| ||||||| ||||||||||||||||||||    
T  33371005 acacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatggtgcaacaaaaaatcatatgtaagatttcacacccgtcttacat 33370914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 8630367 - 8630465
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| ||   |||||||||||||| ||||||||||| ||||||||||||    
T  8630367 tgacacataaatgcatgtggtaccaaatcacctccaggtcgtcaccttcgatgccacttgaacatcgtatgtaagatttcacacccatcttacataatc 8630465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 39654163 - 39654243
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaatgacaataataata 88  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||||||||||    
T  39654163 acatcatcataatccacataacagttaagcatgaataattcaattcaaatatcatgtacttaatcaatgataataataata 39654243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 41660117 - 41660229
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||  |||||||  ||||||||||||||||||||||| |||||||||||| ||||||||   |||||||| |||||||| ||||||| |||||||    
T  41660117 atgatatgcgcctaatcccgacacatatatgcatgtggtaccaaatcacctcaagatcgtcacccatgatgcaacaaaaacatcatatgtaagatttcac 41660216  T
Q  337 acccgtcttacat 349  Q
    ||| |||||||||    
T  41660217 acctgtcttacat 41660229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 9592393 - 9592300
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   |||| |||||| ||||| | ||||| ||||||||||||||||||||    
T  9592393 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgtaacaaacacatcatgtgtaagatttcacacccgtcttacat 9592300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 14060880 - 14060783
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||| |||||||| |||| |||| |||||| | ||||| ||| ||||||||||||    
T  14060880 gacacgtatatgcatgtgataccaaatcacctcaaggtcgtcacctttgatgcaacaaaaatatcgaatgtaagagttcacccccatcttacataatc 14060783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 17137699 - 17137779
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaatgacaataataata 88  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| ||||||| ||||||| ||||| ||||    
T  17137699 acatcatcataatccacataacagttaaccatgaataattcaattcaaatatcacatacttagtcaatgataataaaaata 17137779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 25769532 - 25769612
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaatgacaataataata 88  Q
    |||||||||||||||||||||| ||||| ||||||| ||| ||||||||| ||| |||||||||| |||| ||||||||||    
T  25769532 acatcatcataatccacataacggttaagcatgaatgattaaattcaaatatcacatacttaatcgatgataataataata 25769612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 11063020 - 11062954
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||  |||| ||||| ||||||    
T  11063020 acatcatcataatccacataacaattaacatgaataattcaattcaaacatcatgtacttgatcaat 11062954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 11884079 - 11884005
Alignment:
Q  14 atcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataata 88  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||| |||| ||||| | | ||||||||||    
T  11884079 atcataatccacataacagttaacatgaataaatcaattcaaatatcatgtactcaatcatttataataataata 11884005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 23491033 - 23491133
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   |||||||||| ||||||||||    
T  23491033 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacacccgccttacataat 23491132  T
Q  353 c 353  Q
    |    
T  23491133 c 23491133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 6148501 - 6148456
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  6148501 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 6148456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 12951512 - 12951557
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  12951512 gacacatatatgcatgtggtaccgaatcacttcaaggtcgtcacct 12951557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 14523049 - 14523004
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  14523049 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 14523004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 2048588 - 2048687
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa--aacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| ||||  |  ||||||||||||||||||| |||||   |||||||||||||   |||||||||| |||||||||||    
T  2048588 tgacacataaatgcatgtggtaccaaatcttcaaaaggtcgtcaccttcgatggaacaactcacatcgtatgtaagggttcacacccgccttacataatc 2048687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 14061110 - 14061031
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaatgacaataataata 88  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||| ||  |||| |||||||||||||| || |||||||    
T  14061110 acatcatcataatccacataacagttaagcatgaataattcaattc-aacatcatgtacttaatcaatgataacaataata 14061031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 12563397 - 12563334
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatc 72  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||| |||| |||| |||||||||    
T  12563397 acatcatcataattcacataacacttaacatgaataattcaatttaaatatcatgtacttaatc 12563334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15515925 - 15515991
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    |||||||||||||||||||| ||||| ||||||||||| | ||||||||| |||| |||||||||||    
T  15515925 acatcatcataatccacatagcagttaaacatgaataaatcaattcaaatatcatttacttaatcaa 15515991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 33340370 - 33340470
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  33340370 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 33340469  T
Q  353 c 353  Q
    |    
T  33340470 c 33340470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 10737086 - 10737183
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| || ||||||||||| |||| ||  ||||||| |||||||||||  | || |||||||||||||   |||||||||| |||||||||||    
T  10737086 tgacacataaattcatgtggtaccaaatctccaaaaggtcgccaccttcgatgataaaacacatcgtatgtaagggttcacacccgccttacataatc 10737183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 11813359 - 11813404
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  11813359 tgacacatatatgcatgtggtaccaaatcacctcagggtcgtcacc 11813404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 17536649 - 17536604
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  17536649 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 17536604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 19572474 - 19572429
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  19572474 tgacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 19572429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 51160110 - 51160038
Alignment:
Q  258 acacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa--aacatcgtatgtaa 328  Q
    |||||||||||||||||||||| |||| ||  ||||||||||||||||||| |||||   |||||||||||||    
T  51160110 acacatatatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatggaacaactcacatcgtatgtaa 51160038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 16183708 - 16183664
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  16183708 gacacatatatgcatgtggtaccaaatcacctcaaagtcgtcacc 16183664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 5227245 - 5227343
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacc-tcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||||||| ||   ||||||||||| |||||||  | || |||| ||||||||   |||||||||| |||||||||||    
T  5227245 tgacacataaatgcatgtggtaccgaatctccaaaaaggtcgtcacattcgatgataaaacacattgtatgtaagggttcacacccgccttacataatc 5227343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 11199415 - 11199349
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| |||  |||| ||||| ||||||    
T  11199415 acatcatcataatccacataacaattaacatgaacaattcaatttaaacatcatgtacttgatcaat 11199349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 11636938 - 11637040
Alignment:
Q  172 tatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatatgc 269  Q
    |||||||||||| | |||||||||||||| ||||| || | || ||||||| |||||||||| |||| |||||||| |||||  || |||||||| ||||    
T  11636938 tatcacaaccaatccctcacaaccacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgcccctagacacgacacataaatgc 11637037  T
Q  270 atg 272  Q
    |||    
T  11637038 atg 11637040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 14287323 - 14287389
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||||||||||||||| |||||||||||| || |||| |||  |||| ||||| ||||||    
T  14287323 acatcatcataatccacataacaattaacatgaatagttcaatttaaacatcatgtacttgatcaat 14287389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 17536923 - 17536857
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||||||||||||||| |||||||||||| || |||| ||| |||||  |||| ||||||    
T  17536923 acatcatcataatccacataacatttaacatgaatatttcaatttaaacttcatgcacttgatcaat 17536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 35121921 - 35121959
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  35121921 acatcatcataatccaaataacagttaacatgaataatt 35121959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 11062734 - 11062689
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  11062734 gacacatatatgcatgtggtaccgtttcacttcaaggtcgtcacct 11062689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 11883966 - 11883921
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||    
T  11883966 gacacatatatgcatgtggtaccaaatcacttcaaagtcgtcacct 11883921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 14296957 - 14297002
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||    
T  14296957 gacacgtatatgcatgtggtaccatatcacctcaaggtcgtcacct 14297002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 14302584 - 14302629
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||    
T  14302584 gacacgtatatgcatgtggtaccatatcacctcaaggtcgtcacct 14302629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 14846289 - 14846192
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  | || |||||||||||||   ||||| |||  |||||||||||    
T  14846289 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaagggttcaccccccccttacataatc 14846192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 17936455 - 17936488
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaa 42  Q
    ||||||||||||||||||||||||||||||||||    
T  17936455 acatcatcataatccacataacagttaacatgaa 17936488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 22145926 - 22145881
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||    
T  22145926 tgacacataaatgcatgtggtaccaaattacctcaaggtcgtcacc 22145881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 12774937 - 12774897
Alignment:
Q  263 tatatgcatgtggtaccgaatcacctcaaggtcgtcacctt 303  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  12774937 tatatgcatgtggtaccgggtcacctcaaggtcgtcacctt 12774897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 17099138 - 17099182
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||    
T  17099138 gacacatatatgcatgtggtaccaaatctcctcaaggttgtcacc 17099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 18008891 - 18008827
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||||||| ||   || ||||| |||||||| ||||||| |||||||||||||||||||    
T  18008891 caataataatacataatggtaactccaaatatcacaaacaatcactcacaatcacaagtatgtca 18008827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 19945156 - 19945228
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaa 328  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  | || |||||||||||||    
T  19945156 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaa 19945228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 319486 - 319451
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  319486 acatcatcataatccaaataacagttaacatgaata 319451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 12351709 - 12351674
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  12351709 acatcatcataatccaaataacagttaacatgaata 12351674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 14523278 - 14523243
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    ||||||||||||||||||||||| ||||||||||||    
T  14523278 acatcatcataatccacataacaattaacatgaata 14523243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 15548828 - 15548867
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataatt 47  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  15548828 acatcatcataatccacataacagttatacatgaataatt 15548867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 15874506 - 15874553
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataatttaattcaa 55  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  15874506 acatcatcataatccacataacagttagacatgaataaaataattcaa 15874553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 15989507 - 15989550
Alignment:
Q  260 acatatatgcatgtggtaccgaatcacctc-aaggtcgtcacct 302  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  15989507 acatatatgcatgtggtaccaaatcacctcaaaggtcgtcacct 15989550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 17098913 - 17098948
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  17098913 acatcatcataatccaaataacagttaacatgaata 17098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 18737974 - 18738009
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  18737974 acatcatcataatccaaataacagttaacatgaata 18738009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 19230579 - 19230678
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc-ttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||| ||||||| |||| ||  || ||||||||| ||||||| | |||| |||||||||||||   |||||||||  |||||||||||    
T  19230579 tgacacatatatgcatatggtaccaaatctccaaaacgtcgtcacctttcgatgaatcaaacacatcgtatgtaagggttcacacccaccttacataatc 19230678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 301
Target Start/End: Original strand, 30204927 - 30204962
Alignment:
Q  266 atgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||| |||||||||||||||||||||    
T  30204927 atgcatgtggtaccaaatcacctcaaggtcgtcacc 30204962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 38166213 - 38166248
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  38166213 acatcatcataatccaaataacagttaacatgaata 38166248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 13815856 - 13815894
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  13815856 acatcatcataatcaaaataacagttaacatgaataatt 13815894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 22146145 - 22146107
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  22146145 acatcatcataatccaaataatagttaacatgaataatt 22146107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 50113991 - 50113953
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  50113991 acatcatcataatccaaataatagttaacatgaataatt 50113953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 11330840 - 11330803
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  11330840 acatcatcataatccacataacagttatacatgaataa 11330803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 12563179 - 12563134
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  12563179 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 12563134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 14287553 - 14287598
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  14287553 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 14287598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 35122146 - 35122191
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  35122146 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 35122191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 1469280 - 1469228
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  1469280 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 1469228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 11636909 - 11636969
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtat 138  Q
    |||||||||| ||| || | || |||||||||||||||||||| | ||||| |||||||||    
T  11636909 caataataattcataatgataaatccaagtatcacaaccaatccctcacaaccacaagtat 11636969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 12266117 - 12266065
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  12266117 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 12266065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 12490487 - 12490427
Alignment:
Q  82 aataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||| || | || ||||| |||||||||||| ||| ||||| |||||||||||||    
T  12490487 aataatacataatgataaatccaaatatcacaaccaaacactcacaaccacaagtatgtca 12490427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 15516159 - 15516199
Alignment:
Q  262 atatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||  |||||| |||||||||||||||    
T  15516159 atatatgcatgtggtacgaaatcacttcaaggtcgtcacct 15516199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 15574574 - 15574626
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  15574574 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 15574626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 15613593 - 15613645
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  15613593 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 15613645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 16259573 - 16259625
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  16259573 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 16259625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 23081792 - 23081740
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  23081792 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 23081740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 39654373 - 39654421
Alignment:
Q  254 catgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||| |||||| ||||||| |||||| ||||||| |||||||    
T  39654373 catgacacatacatgcatatggtaccaaatcacttcaaggttgtcacct 39654421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 48420082 - 48420142
Alignment:
Q  82 aataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||| || | || ||||| |||||||| ||||||| ||||| |||||||||||||    
T  48420082 aataatacataatgataaatccaaatatcacaatcaatcactcacaaccacaagtatgtca 48420142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 142 - 353
Target Start/End: Original strand, 7726988 - 7727200
Alignment:
Q  142 ataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatga 241  Q
    |||||||| |||||| || | || || ||||||||||||||| |||||||||||||||| || || |||||||||||||| |||||||||||||||||||    
T  7726988 ataataataatacataatgataaatccaaatatcacaaccaatcactcacaaccacaagtatgtcaatcattccacaattaggactcatgcaacaaatga 7727087  T
Q  242 tatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacaccc 340  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  7727088 tatgtccctaatcatgacacgtaaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacaccc 7727187  T
Q  341 gtcttacataatc 353  Q
     ||||||||||||    
T  7727188 atcttacataatc 7727200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 171 - 353
Target Start/End: Complemental strand, 37189858 - 37189674
Alignment:
Q  171 atatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatgc 269  Q
    ||||||||||||| |||||||| ||||||| || || || |||||||| || ||||||||| |||||| |||||||||||||| ||||||||||| ||||    
T  37189858 atatcacaaccaatcactcacagccacaagtatgtcaattattccacatttaggactcatgaaacaaaatgatatgtccctaaacatgacacataaatgc 37189759  T
Q  270 atgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37189758 aagtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaatatttcacacccgtcttacataatc 37189674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 23492441 - 23492625
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatg 268  Q
    |||||||||||||||| | ||||||||||||| || || || |||  |||  | ||||||||||||||| |||||||||||||||||||||||||| |||    
T  23492441 aaatatcacaaccaaatattcacaaccacaagtatgtcaattattttacatataggactcatgcaacaa-tgatatgtccctaatcatgacacataaatg 23492539  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  23492540 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 23492625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 163 - 353
Target Start/End: Original strand, 13793560 - 13793752
Alignment:
Q  163 aagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacac 261  Q
    ||||| ||||||||||||||| || || |||||||||| ||  | || ||||||||  | |||||||||||||||| |||||||||||||| ||||||||    
T  13793560 aagtccaaatatcacaaccaatcaatcgcaaccacaagtatgacaattattccacatataggactcatgcaacaaaatgatatgtccctaaacatgacac 13793659  T
Q  262 atatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| || |||||||||||||||||||||    
T  13793660 ataaatgcatgtggtaccgaatcacctcaaggtcgtcacctttgatgcaacaaaaacatcgtatataagatctcacacccgtcttacataatc 13793752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 171 - 353
Target Start/End: Complemental strand, 32967902 - 32967718
Alignment:
Q  171 atatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatgc 269  Q
    ||||||||| ||| ||||||| ||||||||  | || || |||||||| || |||||| ||||||||| |  ||||||||||| |||||| |||| ||||    
T  32967902 atatcacaatcaatcactcacgaccacaagtgtgtcaattattccacatttaggactcttgcaacaaaattctatgtccctaaacatgacgcataaatgc 32967803  T
Q  270 atgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  32967802 atgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 32967718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 173 - 353
Target Start/End: Original strand, 28888358 - 28888541
Alignment:
Q  173 atcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatg 272  Q
    |||||||||||| | ||||||||||||| || || |||||| ||||  | ||||| |||||| || ||||||||||||||||||||| |||| |||||||    
T  28888358 atcacaaccaaatattcacaaccacaagtatgtcaatcatttcacatataggacttatgcaataa-tgatatgtccctaatcatgacgcataaatgcatg 28888456  T
Q  273 tggtaccgaatcacctcaagg---tcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||   || ||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28888457 tggtaccgaatcacctcaaggtcatcatcatcttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 28888541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 21615537 - 21615634
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21615537 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaaaatttcacacccgtcttacataatc 21615634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 24227110 - 24227013
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  24227110 gacacatatatgcatgtcgtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 24227013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 7726919 - 7727053
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagt 107  Q
    |||||||||||||||| ||||||| ||| ||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||| || | || ||||| |    
T  7726919 acatcatcataatccagataacagctaagcatgaataattcaattcaaatatcatgtacttaatcaatgataataataatacataatgataaatccaaat 7727018  T
Q  108 atcacaaccaatcacccacaatcacaagtatgtca 142  Q
    ||||||||||||||| ||||| |||||||||||||    
T  7727019 atcacaaccaatcactcacaaccacaagtatgtca 7727053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 27185472 - 27185374
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  27185472 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacacgtcttacataatc 27185374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 19860758 - 19860855
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  19860758 gacacatatatgcatgtggtaccaaatcaccccaaggtcgtcaccttcgatacaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 19860855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 21661362 - 21661268
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  21661362 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacaccagtcttacat 21661268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 4863789 - 4863887
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  4863789 tgacgcataaatgaatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagagttcacacccgtcttacataatc 4863887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 248 - 349
Target Start/End: Original strand, 11964464 - 11964566
Alignment:
Q  248 cctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtctta 346  Q
    |||||||  |||||||| |||||||||||||| || ||||||||||||||||||||| ||||||| |||||||||||||||| |||||| |||||| |||    
T  11964464 cctaatcccgacacatacatgcatgtggtaccaaaccacctcaaggtcgtcaccttcaatgcaacaaaaacatcgtatgtaagatttcaaacccgtatta 11964563  T
Q  347 cat 349  Q
    |||    
T  11964564 cat 11964566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 20455740 - 20455647
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||   |||||||| |||||||| ||||||| |||||||| |||||||||||    
T  20455740 gacacatatatgcatgtggtaccaaatcacctcaagatcgttacccatgatgcaacaaaaacatcatatgtaagatttcacatccgtcttacat 20455647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 5452475 - 5452432
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcac 300  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  5452475 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcac 5452432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 23453411 - 23453456
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  23453411 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 23453456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 23460655 - 23460700
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  23460655 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 23460700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 23464916 - 23464961
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  23464916 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 23464961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 21392655 - 21392699
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  21392655 gacacatatatgcatgtggtaccaaatcaactcaaggtcgtcacc 21392699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 11338802 - 11338731
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaa 80  Q
    ||||||||||||||||||||||| |||||||||||| || |||| |||  |||| ||||| |||||| ||||    
T  11338802 acatcatcataatccacataacaattaacatgaatatttcaattaaaagatcatgtacttgatcaataacaa 11338731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 24185137 - 24185099
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  24185137 acatcatcataatccaaataacagttaacatgaataatt 24185099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 1170361 - 1170320
Alignment:
Q  260 acatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  1170361 acatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 1170320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 3672454 - 3672499
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||    
T  3672454 gacacatatatgcatgtggtaccaactcacttcaaggtcgtcacct 3672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 11582370 - 11582415
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  11582370 tgacacatatatgcatgtggtaccaaatcatctcagggtcgtcacc 11582415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23453184 - 23453237
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcat 62  Q
    |||||||||||||||||||||||  |||||||||||||| |||| |||| ||||    
T  23453184 acatcatcataatccacataacaaataacatgaataattcaatttaaatatcat 23453237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23460428 - 23460481
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcat 62  Q
    |||||||||||||||||||||||  |||||||||||||| |||| |||| ||||    
T  23460428 acatcatcataatccacataacaaataacatgaataattcaatttaaatatcat 23460481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23464689 - 23464742
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcat 62  Q
    |||||||||||||||||||||||  |||||||||||||| |||| |||| ||||    
T  23464689 acatcatcataatccacataacaaataacatgaataattcaatttaaatatcat 23464742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 24470760 - 24470805
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||    
T  24470760 tgacccatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 24470805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 28258050 - 28258094
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  28258050 tgacacatatatgcatgtggtacc-aatctcctcaaggtcgtcacc 28258094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 34937571 - 34937606
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  34937571 acatcatcataatccaaataacagttaacatgaata 34937606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 19403813 - 19403866
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcat 62  Q
    |||||||||||||||| |||| | |||||||||||| || ||||||||| ||||    
T  19403813 acatcatcataatccatataataattaacatgaatagttcaattcaaatatcat 19403866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 23492236 - 23492273
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  23492236 acatcatcataatccacataacagttagacatgaataa 23492273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 24184912 - 24184867
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  24184912 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 24184867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 10779927 - 10779879
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttc 304  Q
    ||||||||| |||||||||||||| |||| |  ||||||||||||||||    
T  10779927 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcaccttc 10779879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 16534837 - 16534889
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  16534837 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 16534889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 19498330 - 19498378
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttc 304  Q
    ||||||||| |||||||||||||| |||| |  ||||||||||||||||    
T  19498330 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcaccttc 19498378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 21653091 - 21653051
Alignment:
Q  261 catatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||| |||  ||||||||||||||||    
T  21653091 catatatgcatgtggtaccaaatgtcctcaaggtcgtcacc 21653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 21933907 - 21933855
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  21933907 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 21933855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 21940077 - 21940025
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  21940077 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 21940025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 22368232 - 22368180
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  22368232 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 22368180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 23236177 - 23236117
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtat 138  Q
    |||||||||| ||| || | || |||||||||||||||||||||| ||||  |||||||||    
T  23236177 caataataattcataatgataaatccaagtatcacaaccaatcactcacatccacaagtat 23236117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 35580785 - 35580837
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  35580785 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 35580837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 35792878 - 35792826
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  35792878 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 35792826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 37010911 - 37010859
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  37010911 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 37010859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 142 - 353
Target Start/End: Original strand, 27959439 - 27959651
Alignment:
Q  142 ataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatga 241  Q
    |||||||| |||||| |||||||  | ||||||||||||||| |||||||||||||||| || || |||||||||||||| |||||||||||||||||||    
T  27959439 ataataataatacataataacaaaaccaaatatcacaaccaatcactcacaaccacaagtatgtcaatcattccacaattaggactcatgcaacaaatga 27959538  T
Q  242 tatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacaccc 340  Q
    |||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  27959539 tatgtccctaatcatgacatttaaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagattttacaccc 27959638  T
Q  341 gtcttacataatc 353  Q
    |||||||||||||    
T  27959639 gtcttacataatc 27959651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 37958793 - 37958607
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| ||||| |||||||||| || || |||||| |||| || |||||||||||||||| || ||||||||||| |||||| |||| ||    
T  37958793 aaatatcacaaccaatcactcgcaaccacaagtatgtcaatcatttcacatttaggactcatgcaacaaaatgttatgtccctaaacatgacgcataaat 37958694  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  37958693 gcatgtggtaccgaatcacctcaaggtcatcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 37958607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 170 - 353
Target Start/End: Complemental strand, 12245985 - 12245802
Alignment:
Q  170 aatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatg 268  Q
    |||||||||||||| ||| ||  |||||||| || || || |||||||| || |||||||||||||||| |||||||||||||| ||||||||||| |||    
T  12245985 aatatcacaaccaatcaccca--accacaagtatgtcaattattccacatttaggactcatgcaacaaaatgatatgtccctaaacatgacacataaatg 12245888  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  12245887 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacactcgtcttacataatc 12245802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 188 - 353
Target Start/End: Complemental strand, 34197882 - 34197715
Alignment:
Q  188 tcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcac 286  Q
    ||||||||||||| || || || ||| ||||  | |||||||||||||||| || ||||||||||| |||||| |||| |||||||||||||||||||||    
T  34197882 tcacaaccacaagtatgtcaattatttcacatataggactcatgcaacaaaatgttatgtccctaaacatgacgcataaatgcatgtggtaccgaatcac 34197783  T
Q  287 ctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  34197782 ctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 34197715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 15853052 - 15852866
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    |||||||||||| || |||||||||||||||| || || ||||||||||| || | |||||||||||||| || ||||||||||  ||||||||||| ||    
T  15853052 aaatatcacaacaaatcactcacaaccacaagtatgtcaatcattccacatttagaactcatgcaacaaaatgttatgtccctagacatgacacataaat 15852953  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgc-aacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||    |||||||||||||    
T  15852952 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaaaaaaaacatcgtatgtaagatttcaccaaagtcttacataatc 15852866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 12901411 - 12901313
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12901411 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaatatttcacacccgtcttacataatc 12901313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 27959370 - 27959504
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagt 107  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| || ||||||||||||| |||||||  |||| |    
T  27959370 acatcaccataatccacataacagttaagcatgaataatttaattcaaatatcatgtacttaatcaaagataataataatacataataacaaaaccaaat 27959469  T
Q  108 atcacaaccaatcacccacaatcacaagtatgtca 142  Q
    ||||||||||||||| ||||| |||||||||||||    
T  27959470 atcacaaccaatcactcacaaccacaagtatgtca 27959504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 41167665 - 41167484
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||| ||| |||||||||||||||| || || |  |||||||| || | |||||||||||||| || |||||||||||     ||||| | ||    
T  41167665 aaatatcacaatcaatcactcacaaccacaagtatgtcaactattccacacttagaactcatgcaacaaaatgttatgtccctaa-----acacacaaat 41167571  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
     |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  41167570 acatgtggtaccgaatcacctcaaggtcgtcaccttcgatgtaacaaaaacatcgtatgtgagatttcacacccgtcttacataatc 41167484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 21961207 - 21961109
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21961207 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 21961109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 8874132 - 8874034
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||    
T  8874132 tgacaaataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcttatgtaagagttcacacccgtcttacataatc 8874034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 14900002 - 14900099
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||||| ||||    
T  14900002 gacacatatatgcatgtgataccaaatcacctcaaggtcgtcacctccgatgcaacaaaaacatcgtatgtaagatttcacatccgtcttacaaaatc 14900099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 10239099 - 10238987
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||    |||||||| |||||||| ||||||| |||||||    
T  10239099 atgatatgtgcctaatcccgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacacatgatgcaacaaaaacatcatatgtaaaatttcac 10239000  T
Q  337 acccgtcttacat 349  Q
    |||||||||||||    
T  10238999 acccgtcttacat 10238987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 41257995 - 41257902
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||| ||| ||||||| ||||||||||||||||||||    
T  41257995 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgcaacaaaaatatcatatgtaagatttcacacccgtcttacat 41257902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 5372341 - 5372248
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||   |||||||| |||||||| ||||||| | ||||||||||||||||||    
T  5372341 gacacatatatgcatgtggtaccaaatcacctcaagatcgtcacccatgatgcaacaaaaacatcatatgtaagacttcacacccgtcttacat 5372248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 349
Target Start/End: Complemental strand, 47469977 - 47469887
Alignment:
Q  260 acatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||||||||||||||| ||| ||| |||||||||||||   |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  47469977 acatatatgcatgtggtaccaaataaccccaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacat 47469887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 13811558 - 13811493
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||    
T  13811558 acatcatcataatccacataacaattaacatgaataattcaattcaaatatcatgtacttaatcaa 13811493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 7966342 - 7966230
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| |||||||| ||||||| || || || ||| |||| || ||||||| ||||||| ||||||||||||||| || |||||||| ||    
T  7966342 aaatatcacaaccaatcactcacatccacaagtatgtcaattatttcacattttggactcacgcaacaatatgatatgtccctaaacacgacacataaat 7966243  T
Q  268 gcatgtggtaccg 280  Q
    ||||| |||||||    
T  7966242 gcatgcggtaccg 7966230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 50223824 - 50223712
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||  |||||||  |||||||||||||||||| |||| ||||||||||||||| |||||   |||||||| |||||||| ||||| | ||||||     
T  50223824 atgatatgcgcctaatcccgacacatatatgcatgtgataccaaatcacctcaaggtcatcacccatgatgcaacaaaaacatcatatgttagatttcat 50223725  T
Q  337 acccgtcttacat 349  Q
    |||||||||||||    
T  50223724 acccgtcttacat 50223712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 12837965 - 12837906
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaa 316  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  12837965 gacacatacatgcatgtggtaccaaatcacatcaaggtcgtcaccttcgatgcaacaaaa 12837906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 110010 - 110107
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  |||||||||||||||||||  | || |||||||||||||   |||||||||| |||||||||||    
T  110010 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaacacatcgtatgtaagggttcacacccgccttacataatc 110107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 13448783 - 13448670
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatata 266  Q
    ||||||||||||||| |||||||| ||||||| ||||| || | || ||||| | |||||||||| |||| ||||||||||||||  |||||| |||| |    
T  13448783 aaatatcacaaccaaccactcacatccacaagtatatccattattttcacaactaggactcatgccacaatatgatatgtccctagacatgacgcataaa 13448684  T
Q  267 tgcatgtggtaccg 280  Q
    |||||| |||||||    
T  13448683 tgcatgcggtaccg 13448670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 45460894 - 45460821
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaata 82  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||||  |||| ||||| |||||||| ||||    
T  45460894 acatcataataatccaaataacagttaacatgaataattcaattcaaacatcatgtacttgatcaatgataata 45460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 15043400 - 15043447
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttc 304  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  15043400 gacacatatatgcatgtggtaccaaatgacctcaaggtcgtcaccttc 15043447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 15111024 - 15110977
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttc 304  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  15111024 gacacatatatgcatgtggtaccaaatgacctcaaggtcgtcaccttc 15110977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 12901631 - 12901566
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||  |||| ||||| ||||||    
T  12901631 acatcatcataatccaaataacagttaacatgaataa-ttaattcaaacatcatgtacttgatcaat 12901566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 280
Target Start/End: Complemental strand, 13595797 - 13595659
Alignment:
Q  144 aataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atga 241  Q
    |||||| || ||| |||| || || ||||||||||||||| |||||||| ||||||| ||||| || | || ||||||| |||||||||| |||| |||     
T  13595797 aataataattcataataataaatccaaatatcacaaccaatcactcacatccacaagtatatcaattattttcacaattaggactcatgccacaacatgg 13595698  T
Q  242 tatgtccctaatcatgacacatatatgcatgtggtaccg 280  Q
    ||||||||||  || ||||| || ||||||| |||||||    
T  13595697 tatgtccctagacacgacacctaaatgcatgcggtaccg 13595659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 20813890 - 20813824
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||||  |||| ||||| ||||||    
T  20813890 acatcatcataatccaaataatagttaacatgaataattcaattcaaacatcatgtacttgatcaat 20813824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 44345289 - 44345335
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||    
T  44345289 tgacacatatatgcatgtggtaacaaatcacctcaaggtcgtcacct 44345335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 16366405 - 16366360
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  16366405 tgacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 16366360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 30236411 - 30236366
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattca 54  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  30236411 acatcatcataatccaaataacagttaacatgaataattcaattca 30236366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 43283086 - 43283041
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  43283086 gacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacct 43283041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 43283293 - 43283244
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataatttaattcaaat 57  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  43283293 acatcatcataatccacataacagttagacatgaataattcaattcaaat 43283244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 53909475 - 53909430
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  53909475 tgacacatatatgcatgtggtaccaaatcacctcagggtcgtcacc 53909430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 5407576 - 5407672
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacata 264  Q
    ||||||||||||||| |||||||| ||||||| || || || ||| |||| || |||||||||| |||| ||| ||||||||||  |||||||||||    
T  5407576 aaatatcacaaccaatcactcacatccacaagtatgtcaattatttcacatttaggactcatgccacaatatggtatgtccctagacatgacacata 5407672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 17377083 - 17377024
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaa 316  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||   ||||||||||||    
T  17377083 gacacatatatgaatgtggtaccaaatcacctcaaggtcatcacccatgatgcaacaaaa 17377024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 33738688 - 33738731
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcac 300  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  33738688 gacacatatatgcatgtggtaccaaatcaccttaaggtcgtcac 33738731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 44054168 - 44054215
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaa 56  Q
    |||||||||||||||| |||||||||||||| | ||||||||||||||    
T  44054168 acatcatcataatccaaataacagttaacataattaatttaattcaaa 44054215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 18294746 - 18294680
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||||||||||||||| |||||||||| |||| ||| || ||||||||| |||| ||||| ||||||    
T  18294746 acatcatcataatccaaataacagttagcatggatatttcaattcaaatatcatctacttgatcaat 18294680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 21961440 - 21961402
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  21961440 acatcatcataatccaaataacagttaacatgaataatt 21961402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 30236191 - 30236145
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  30236191 tgacacatatatggatgtggtaccatatcacctcaaggtcgtcacct 30236145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 44054383 - 44054429
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  44054383 tgacacataaatgcatgtggtaccggatcacctcaaggccgtcacct 44054429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 14867696 - 14867745
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaat 57  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  14867696 acatcatcataatccacataacagttaaacataaataattcaattcaaat 14867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 52267168 - 52267123
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||    
T  52267168 gacacatacatgcatgtggtaccaaatcacttcaaggtcgtcacct 52267123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 37958819 - 37958755
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||||||| ||   |||||||| |||||||||||||||| | ||| |||||||||||||    
T  37958819 caataataatacataatggtaattccaaatatcacaaccaatcactcgcaaccacaagtatgtca 37958755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 8874346 - 8874311
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  8874346 acatcatcataatccaaataacagttaacatgaata 8874311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 33738477 - 33738512
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  33738477 acatcatcataatccaaataacagttaacatgaata 33738512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 53706828 - 53706793
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  53706828 acatcatcataatccaaataacagttaacatgaata 53706793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 18496109 - 18496063
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||||   |||| |||||||||||||||    
T  18496109 tgacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 18496063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 13811330 - 13811285
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  13811330 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 13811285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 16395745 - 16395700
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  16395745 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 16395700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 34198025 - 34197988
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  34198025 acatcatcataatccacataacagttagacatgaataa 34197988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 45460654 - 45460609
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||| |||||||||| ||||||  |||||||||||||||||||||    
T  45460654 gacacgtatatgcatgcggtaccatatcacctcaaggtcgtcacct 45460609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 5407550 - 5407614
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||| ||| || | || ||||| |||||||||||||||| ||||  |||||||||||||    
T  5407550 caataataattcataatgataaatccaaatatcacaaccaatcactcacatccacaagtatgtca 5407614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 7966368 - 7966304
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||| ||| || | || ||||| |||||||||||||||| ||||  |||||||||||||    
T  7966368 caataataattcataatgataaatccaaatatcacaaccaatcactcacatccacaagtatgtca 7966304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 13595798 - 13595738
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtat 138  Q
    |||||||||| ||| |||| || ||||| |||||||||||||||| ||||  |||||||||    
T  13595798 caataataattcataataataaatccaaatatcacaaccaatcactcacatccacaagtat 13595738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 14994728 - 14994780
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  14994728 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 14994780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 16521316 - 16521415
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg--caacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| ||||  |  ||||||||||||| |||||  |||   ||||||||||||||   ||||| |||| |||||||||||    
T  16521316 tgacacataaatgcatgtggtaccaaatcttcaaaaggtcgtcacctccgatggacaagccaacatcgtatgtaagggttcacccccgccttacataatc 16521415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 19999055 - 19999103
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttc 304  Q
    ||||||||| |||||||||||||| |||| |  ||||||||||||||||    
T  19999055 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcaccttc 19999103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 53706508 - 53706464
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||    
T  53706508 gacacatatatgcatgtggtactagatcacctcagggtcgtcacc 53706464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 142 - 353
Target Start/End: Complemental strand, 7421 - 7210
Alignment:
Q  142 ataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatga 241  Q
    ||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||||| || || |||||| | ||||| ||||||||||||||| |||    
T  7421 ataataatactacatgataccaattctagatatcacaaccaatcactcacaaccacaagtatgtcaatcatttcgcaattaggactcatgcaacaa-tga 7323  T
Q  242 tatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacaccc 340  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||     
T  7322 tatgtccctaatcatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtgtgtaagatttcacacca 7223  T
Q  341 gtcttacataatc 353  Q
    |||||||||||||    
T  7222 gtcttacataatc 7210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 7489 - 7356
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagta 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| |||||| ||||||| ||||||||| |||||| |  ||    
T  7489 acatcatcataatccacataacagttaacatgaataattcaattcaaatatcatgtacttaaccaatgataataatactacatgataccaattctagata 7390  T
Q  109 tcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||||||| ||||| |||||||||||||    
T  7389 tcacaaccaatcactcacaaccacaagtatgtca 7356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 4e-69; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 142 - 353
Target Start/End: Complemental strand, 39448578 - 39448367
Alignment:
Q  142 ataataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatga 241  Q
    ||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||||| || || |||||| ||||||  ||||||||||||||| |||    
T  39448578 ataataatactacatgataccaattctagatatcacaaccaatcactcacaaccacaagtatgtcaatcatttcacaataaggactcatgcaacaa-tga 39448480  T
Q  242 tatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacaccc 340  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||     
T  39448479 tatgtccctaatcatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtgtgtaagatttcacacca 39448380  T
Q  341 gtcttacataatc 353  Q
    |||||||||||||    
T  39448379 gtcttacataatc 39448367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 21192477 - 21192291
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||| ||||||| |||||||||||||||| || || || |||||||| || |||||||||||||||| |||||||||||||| ||||||||||| ||    
T  21192477 aaatatcgcaaccaatcactcacaaccacaagtatgtcaattattccacatttaggactcatgcaacaaaatgatatgtccctaaacatgacacataaat 21192378  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21192377 gcatgtggtaccgaatcaccttaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 21192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 21199904 - 21199718
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| |||||||||||||||| || || || |||||||| || |||||||||||||||| |||||||||||||| ||| ||||||| ||    
T  21199904 aaatatcacaaccaatcactcacaaccacaagtatgtcaattattccacatttaggactcatgcaacaaaatgatatgtccctaaacatcacacataaat 21199805  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  21199804 gcatgtggtaccgaatcacctcaagctcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 21199718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 143 - 353
Target Start/End: Original strand, 21695968 - 21696179
Alignment:
Q  143 taataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgat 242  Q
    ||||||| |||||||||||||| |  || ||||||||| || ||| || || |||||| || || |||||| ||||||| || |||||||||||||||||    
T  21695968 taataataatacatgataacaatttcaattatcacaactaatcacccaaaatcacaagtatgtcaatcatttcacaattaggtctcatgcaacaaatgat 21696067  T
Q  243 atgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccg 341  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  21696068 atgtccctaatcatgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacattgtatgtaagatttcacacccg 21696167  T
Q  342 tcttacataatc 353  Q
    | ||||||||||    
T  21696168 ttttacataatc 21696179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 23835653 - 23835838
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| ||||| |||||||||| || || || |||||||| || |||||||||||||||| |||||||||||||| ||||||||||| ||    
T  23835653 aaatatcacaaccaatcactcgcaaccacaagtatgtcaattattccacatttaggactcatgcaacaaaatgatatgtccctaaacatgacacataaat 23835752  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  23835753 gcatgtggtaccgaa-cacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagattttacacccgtcttacataatc 23835838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 21695899 - 21696032
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagta 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||    
T  21695899 acatcatcataatccacataacagttaacatgaataattcaattcaaatttcatatacttaatcaatggtaataataatacatgataacaatttcaatta 21695998  T
Q  109 tcacaaccaatcacccacaatcacaagtatgtca 142  Q
    ||||||| ||||||||| ||||||||||||||||    
T  21695999 tcacaactaatcacccaaaatcacaagtatgtca 21696032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 39448646 - 39448513
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatgataacaattccaagta 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| |||||| ||||||| ||||||||| |||||| |  ||    
T  39448646 acatcatcataatccacataacagttaacatgaataattcaattcaaatatcatgtacttaaccaatgataataatactacatgataccaattctagata 39448547  T
Q  109 tcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||||||| ||||| |||||||||||||    
T  39448546 tcacaaccaatcactcacaaccacaagtatgtca 39448513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 37655288 - 37655191
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  37655288 gacacatatatgcatgtggtgccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 37655191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 41244158 - 41244255
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  41244158 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaatatcgtatgtaagatttcacacccgtcttacataatc 41244255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 33170767 - 33170879
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||  |||||||  ||||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||||||| ||||||| |||||||    
T  33170767 atgatatgcgcctaatcccgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcac 33170866  T
Q  337 acccgtcttacat 349  Q
    |||||||||||||    
T  33170867 acccgtcttacat 33170879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 37605513 - 37605612
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtc-gtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||    
T  37605513 tgacacataaatgcatgtggtaccggatcacctcaaggtctgtcaccttcgatgcaacaaaaatatcatatgtaagatttcacacccgtcttacataatc 37605612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 22498945 - 22498852
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  22498945 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacat 22498852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 23116481 - 23116369
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||| ||||  | |||||||||||||||||||||||| |||||| ||||||||||||||   |||||||| |||||||| ||||||| |||||||    
T  23116481 atgatatgtgcctatacttgacacatatatgcatgtggtaccaaatcacatcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcac 23116382  T
Q  337 acccgtcttacat 349  Q
    |||||||||||||    
T  23116381 acccgtcttacat 23116369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 266 - 353
Target Start/End: Complemental strand, 31195917 - 31195829
Alignment:
Q  266 atgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||    
T  31195917 atgcatgtggtaccaaatcaccttaaggtcgtcaccttcgatgcaacaaaaatatcgtatgtaagatttcacgcccgtcttacataatc 31195829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 41245210 - 41245282
Alignment:
Q  282 atcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  41245210 atcacctcaaggtcgtcaccttcgatgcaacaaaaatatcgtatgtaagatttcacacccgtcttacataatc 41245282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 22312191 - 22312284
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||   |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  22312191 gacacatatatgcatgtggtaccaaatcacctcaaagtcatcacccatgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacat 22312284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 33612703 - 33612610
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||| |||||||||||||||||| |||||||||||||||||||||   |||| |||||| ||||| ||||||| ||||||||||||||||||||    
T  33612703 gacatatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgtaacaaacacatcatatgtaagatttcacacccgtcttacat 33612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 25294527 - 25294582
Alignment:
Q  261 catatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaa 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25294527 catatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaa 25294582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 25756516 - 25756571
Alignment:
Q  261 catatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaa 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25756516 catatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaa 25756571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 23153451 - 23153358
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||   | || |||||| ||||| ||||||| ||||||||||||||||||||    
T  23153451 gacacatatatgcatgtggtaccaaatcacctcaagatcgtcacccatggtgtaacaaacacatcatatgtaagatttcacacccgtcttacat 23153358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 45560860 - 45560767
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||| |||||||||||| | |||||||||||||||||||||   |||||||| |||||||| ||||||| |||| |||||||||||||||    
T  45560860 gacacatacatgcatgtggtaacaaatcacctcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagattttacacccgtcttacat 45560767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 16203967 - 16203868
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa--aacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||||||||||| | |||   |||||||||||||   |||||||||| |||||||||||    
T  16203967 tgacacatatatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatggatcaattcacatcgtatgtaagggttcacacccgccttacataatc 16203868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 24238066 - 24238137
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgta 327  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||   |||||||| |||||||||||||||    
T  24238066 gacacatatatgcatgtggtaccaaatcagctcaaggtcgtcacccatgatgcaacaaaaacatcgtatgta 24238137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 45476130 - 45476020
Alignment:
Q  172 tatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatatgc 269  Q
    |||||||||||| |||||||||||||||| ||||| || | || ||||||| |||||||||| |||| |||||||| |||||  || |||||||| ||||    
T  45476130 tatcacaaccaatcactcacaaccacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgcccctagacacgacacataaatgc 45476031  T
Q  270 atgtggtaccg 280  Q
    ||| |||||||    
T  45476030 atgcggtaccg 45476020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 270269 - 270365
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||||||||||  | || ||||||||| ||||  |||||| ||| |||||||||||    
T  270269 tgacacatatatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaacacatcgtat-taatggttcacatccgccttacataatc 270365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 645651 - 645555
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||||||||||  | || ||||||||| ||||  |||||| ||| |||||||||||    
T  645651 tgacacatatatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaacacatcgtat-taatggttcacatccgccttacataatc 645555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 831386 - 831290
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||||||||||  | || ||||||||| ||||  |||||| ||| |||||||||||    
T  831386 tgacacatatatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaacacatcgtat-taatggttcacatccgccttacataatc 831290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 20480123 - 20480168
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  20480123 gacacatatatgcatgtggtaccgaatcacctcaatgtcgtcacct 20480168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 19994845 - 19994801
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  19994845 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 19994801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 24719120 - 24719076
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  24719120 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 24719076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 25120969 - 25121013
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  25120969 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 25121013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 18768691 - 18768624
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||||||| |||| |||||| |||||    
T  18768691 acatcatcataatccacataacagttaagcatgaataaatcaattcaaatatcatgtacttactcaat 18768624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 16416767 - 16416812
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  16416767 gacacatatatgcatgtggtaccaaatcacctcaaggtcatcacct 16416812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 28543397 - 28543442
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  28543397 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcacct 28543442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 29758821 - 29758920
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa--acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||| ||| |||||||||||||| |||| ||  ||||||||||||||||||| ||||||  |||| ||||||||   |||||||||| |||||| ||||    
T  29758821 tgacatataaatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatggaacaaatcacattgtatgtaagggttcacacccgccttacaaaatc 29758920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 17731387 - 17731324
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatc 72  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| |||| |||| || ||||||    
T  17731387 acatcatcataatccacataacaattaacatgaatgattcaatttaaatatcatgtatttaatc 17731324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 21233772 - 21233662
Alignment:
Q  172 tatcacaaccaaacactcacaaccacaagcatatcgatcattc-cacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatatgc 269  Q
    ||||||||||||  |||||||||| |||| ||||| || |||  || |||| |||||||||| |||| |||||||| |||||  ||||||||||| ||||    
T  21233772 tatcacaaccaattactcacaaccgcaagtatatcaattattttcaaaattaggactcatgccacaatatgatatgcccctagacatgacacataaatgc 21233673  T
Q  270 atgtggtaccg 280  Q
    ||| |||||||    
T  21233672 atgcggtaccg 21233662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 22737834 - 22737768
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    |||||||||||||| ||||||||||| |||||||||| || ||||||||| ||||  ||||||||||    
T  22737834 acatcatcataatctacataacagttaaacatgaatagttcaattcaaatatcatgcacttaatcaa 22737768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 24719513 - 24719475
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  24719513 acatcatcataatccaaataacagttaacatgaataatt 24719475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 24930746 - 24930646
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| ||||  |||||||||    
T  24930746 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgctttacataat 24930647  T
Q  353 c 353  Q
    |    
T  24930646 c 24930646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 38531882 - 38531948
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaa 74  Q
    ||||||||||||| || ||||||||||| ||||||||||| ||||||||| ||||  ||||||||||    
T  38531882 acatcatcataattcatataacagttaaacatgaataattcaattcaaatatcatgcacttaatcaa 38531948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 18263157 - 18263044
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatata 266  Q
    ||||||||||| ||| |||||||| ||||||| ||||| | || || |||||||  ||||||||| |||| ||||||||||||||  || |||||||| |    
T  18263157 aaatatcacaaacaatcactcacatccacaagtatatcaaccattttcacaattaagactcatgccacaatatgatatgtccctagacacgacacataaa 18263058  T
Q  267 tgcatgtggtaccg 280  Q
    || ||| |||||||    
T  18263057 tgtatgcggtaccg 18263044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 22323145 - 22323101
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  22323145 tgacacatatatgcatgtggtacc-aatctcctcaaggtcgtcacc 22323101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 269950 - 269985
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  269950 acatcatcataatccaaataacagttaacatgaata 269985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 645970 - 645935
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  645970 acatcatcataatccaaataacagttaacatgaata 645935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 831705 - 831670
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  831705 acatcatcataatccaaataacagttaacatgaata 831670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 16043245 - 16043210
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  16043245 acatcatcataatccaaataacagttaacatgaata 16043210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 28543151 - 28543194
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaatt 52  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||    
T  28543151 acatcatcataatccaaataacaattaacatgaataattcaatt 28543194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 37605283 - 37605330
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaa 56  Q
    |||||||||||||| | ||||||||||||||||||| || ||||||||    
T  37605283 acatcatcataatctaaataacagttaacatgaatatttcaattcaaa 37605330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 3433718 - 3433652
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||| ||||||||||| ||||||||||||||||||| || |||| |||  ||||| |||| ||||||    
T  3433718 acattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatacacttgatcaat 3433652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 13664743 - 13664677
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||| ||||||||||| ||||||||||||||||||| || |||| |||  ||||| |||| ||||||    
T  13664743 acattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatacacttgatcaat 13664677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 13724018 - 13723952
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||| ||||||||||| ||||||||||||||||||| || |||| |||  ||||| |||| ||||||    
T  13724018 acattatcataatccaaataacagttaacatgaatatttcaatttaaacatcatacacttgatcaat 13723952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 20655943 - 20655905
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  20655943 acatcatcataatccaaataacagttagcatgaataatt 20655905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 17731160 - 17731115
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  17731160 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 17731115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 21679663 - 21679708
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  21679663 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 21679708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 31196448 - 31196399
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaat 57  Q
    |||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  31196448 acatcatcataatccacataaacgttaaacatgaataattcaattcaaat 31196399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 38532109 - 38532154
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||||    
T  38532109 gacacatatatgcatggggtaccatatcacttcaaggtcgtcacct 38532154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 272830 - 272778
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  272830 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 272778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 643019 - 643071
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  643019 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 643071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 828825 - 828877
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  828825 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 828877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 5236724 - 5236776
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  5236724 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 5236776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 11543093 - 11543129
Alignment:
Q  313 aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  11543093 aaaacatcatatgtaagatttcacacccgtcttacat 11543129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 17283559 - 17283599
Alignment:
Q  14 atcataatccacataacagttaa-catgaataatttaattc 53  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  17283559 atcataatccacataacagttaatcatgaataattcaattc 17283599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 20708193 - 20708253
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtat 138  Q
    |||||||||| ||| || | || |||||||||||||||||||||| ||||  |||||||||    
T  20708193 caataataattcataatgataaatccaagtatcacaaccaatcactcacatccacaagtat 20708253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 21199930 - 21199866
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||| ||| || | || | ||| |||||||||||||||| ||||| |||||||||||||    
T  21199930 caataataattcataatgataaatacaaatatcacaaccaatcactcacaaccacaagtatgtca 21199866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 22888690 - 22888729
Alignment:
Q  263 tatatgcatgtggtaccgaatcacctcaaggtcgtcacctt 303  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  22888690 tatatgcatgtggtaccgg-tcacctcaaggtcgtcacctt 22888729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 24547753 - 24547805
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  24547753 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 24547805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 37609946 - 37609986
Alignment:
Q  313 aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| ||| ||||||| ||||||||||||||||||||||||    
T  37609946 aaaatatcatatgtaagatttcacacccgtcttacataatc 37609986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 126; Significance: 6e-65; HSPs: 8)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 106650 - 106466
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatg 268  Q
    ||||||||||||||| |||||||||||||||| || || |||||| ||| ||  ||||||||||||||| |||||||||||||||||||||||||| |||    
T  106650 aaatatcacaaccaatcactcacaaccacaagtatgtcaatcatttcacgatgaggactcatgcaacaa-tgatatgtccctaatcatgacacataaatg 106552  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  106551 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaatatcgtatgtaagatttcacacccgtcttacataatc 106466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 238 - 347
Target Start/End: Original strand, 130391 - 130501
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||  |||||||  ||||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||||||| ||||||| |||||||    
T  130391 atgatatgcacctaatcccgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcac 130490  T
Q  337 acccgtcttac 347  Q
    ||| |||||||    
T  130491 accggtcttac 130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 6780 - 6681
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg--caacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  |||   ||||||||||||||   ||||| |||| |||||||||||    
T  6780 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggacaagtcaacatcgtatgtaagggttcacccccgccttacataatc 6681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 106672 - 106612
Alignment:
Q  82 aataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||| || | || ||||| |||||||||||||||| ||||| |||||||||||||    
T  106672 aataatacataatgataaatccaaatatcacaaccaatcactcacaaccacaagtatgtca 106612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 107909 - 107975
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    ||||||||||||||| |||| ||||| ||||||||||  | ||||| ||| ||||||||||||||||    
T  107909 acatcatcataatccgcatatcagttaaacatgaatagatcaattcgaatatcatatacttaatcaa 107975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 114150 - 114112
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  114150 acatcatcataattcaaataacagttaacatgaataatt 114112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 106755 - 106718
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  106755 acatcatcataatccacataacagttatacatgaataa 106718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 108113 - 108158
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  108113 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 108158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 9e-61; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 25304001 - 25304187
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| |||||||||||||||| || || ||  ||||||| || |||||||||||||||| |||||||||||| | ||||||||||| ||    
T  25304001 aaatatcacaaccaagcactcacaaccacaagtatgtcaattgttccacatttaggactcatgcaacaaaatgatatgtcccttaacatgacacataaat 25304100  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  25304101 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccttcttacataatc 25304187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 144 - 353
Target Start/End: Complemental strand, 23823275 - 23823064
Alignment:
Q  144 aataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgat 242  Q
    |||||| |||||| || |||| || ||||||||||||||| |||||||||||||||| || || ||||||||||| || |||||| ||||||||| || |    
T  23823275 aataataatacataatgacaaatccaaatatcacaaccaatcactcacaaccacaagtatgtcaatcattccacatttaggactcgtgcaacaaaatgtt 23823176  T
Q  243 atgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccg 341  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||  | |    
T  23823175 atgtccctagacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacctcag 23823076  T
Q  342 tcttacataatc 353  Q
    ||||||||||||    
T  23823075 tcttacataatc 23823064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 144 - 353
Target Start/End: Complemental strand, 23825219 - 23825008
Alignment:
Q  144 aataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgat 242  Q
    |||||| |||||| || |||| || ||||||||||||||| |||||||||||||||| || || ||||||||||| || |||||| ||||||||| || |    
T  23825219 aataataatacataatgacaaatccaaatatcacaaccaatcactcacaaccacaagtatgtcaatcattccacatttaggactcgtgcaacaaaatgtt 23825120  T
Q  243 atgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccg 341  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||  | |    
T  23825119 atgtccctagacatgacacataaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacctcag 23825020  T
Q  342 tcttacataatc 353  Q
    ||||||||||||    
T  23825019 tcttacataatc 23825008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 5018 - 4832
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| ||||| |||||||||| || || ||||||| ||| || |||||||||||||||| || ||||| ||||| ||||||||||| ||    
T  5018 aaatatcacaaccaatcactcgcaaccacaagtatgtcaatcattctacatttaggactcatgcaacaaaatgttatgttcctaaccatgacacataaat 4919  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||    
T  4918 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacattgtatgtaagatttcacccccgtcttacataatc 4832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 171 - 353
Target Start/End: Complemental strand, 23832327 - 23832143
Alignment:
Q  171 atatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatgc 269  Q
    ||||||||||||| |||||||||||||||| || || ||||||||||| || |||||| ||||||||| || ||||||||||  ||||||||||| ||||    
T  23832327 atatcacaaccaatcactcacaaccacaagtatgtcaatcattccacatttaggactcgtgcaacaaaatgttatgtccctagacatgacacataaatgc 23832228  T
Q  270 atgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||  | |||||||||||||    
T  23832227 atgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacctcagtcttacataatc 23832143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 172 - 353
Target Start/End: Complemental strand, 24296311 - 24296128
Alignment:
Q  172 tatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatgca 270  Q
    |||||| ||||| || ||||||||||||| || || ||||||||||| || |||||||||||||||| || ||||||||||| ||||||||||| |||||    
T  24296311 tatcacgaccaatcaatcacaaccacaagtatgtcaatcattccacatttaggactcatgcaacaaaatgttatgtccctaaacatgacacataaatgca 24296212  T
Q  271 tgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |  |||||||||||||    
T  24296211 tgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaactaaaacatcgtatgtaagatttcacccaagtcttacataatc 24296128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 170 - 353
Target Start/End: Complemental strand, 19670868 - 19670686
Alignment:
Q  170 aatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgc 269  Q
    ||||||||| | ||| | ||||||||||||| || || || ||| ||||  | |||||||| |||||  |||||||||||||||||||||||||| ||||    
T  19670868 aatatcacatctaaatattcacaaccacaagtatgtcaattatttcacatataggactcattcaacat-tgatatgtccctaatcatgacacataaatgc 19670770  T
Q  270 atgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  19670769 atgtggtgccgaatctcctcaaggtcgtcaccttcgatgcatcaagacatcgtatgtaagatttcacacccgtcttacataatc 19670686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 19658471 - 19658568
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  19658471 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 19658568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 24089014 - 24088917
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  24089014 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcatcttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 24088917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 43641348 - 43641445
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaa-caaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||    
T  43641348 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaataaaaacatcgtatgtaagatttcacatccgtcttacataatc 43641445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 25600481 - 25600579
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  25600481 tgacacatatatgcatgtggtaccatattacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 25600579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 19435111 - 19435014
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  19435111 gacacatatatgcatgtggtatcaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtacgtaagatttcacacccgtcttacataatc 19435014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 6877963 - 6878061
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  6877963 tgacacataaatgcatttggtaccggatcacctcaaagtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 6878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 22862008 - 22862106
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  22862008 tgacacataaatgcatgtggtacgagatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagagttcacacccgtcttacataatc 22862106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 8886661 - 8886759
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  8886661 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagagttcacacccgtcttacataatc 8886759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 22654339 - 22654405
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22654339 acatcatcataatccacataacagttaacatgaataattcaattcaaatttcatatacttaatcaat 22654405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 22137468 - 22137375
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   |||| |||||| ||||| ||||||| ||||||||||| ||||||||    
T  22137468 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgtaacaaacacatcatatgtaagatttcacacccatcttacat 22137375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 24272580 - 24272673
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||   |||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  24272580 gacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcacactcgtcttacat 24272673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 27260130 - 27260201
Alignment:
Q  283 tcacctcaaggtcgtcaccttcgatgcaacaaaa-catcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  27260130 tcacctcaaggtcgtcacctttgatgcaacaaaaacatcgtatgtaagatttcacactcgtcttacataatc 27260201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 7319718 - 7319783
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||    
T  7319718 acatcatcataatccacataacaattaacatgaataattcaattcaaatatcatgtacttaatcaa 7319783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 18534351 - 18534444
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||   |||||||| |||||||| ||||||| ||| ||||| ||||||||||    
T  18534351 gacacatatatgcatgtggtaccaaatcacctcaacgtcgtcacccatgatgcaacaaaaacatcatatgtaagattgcacactcgtcttacat 18534444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 15631927 - 15632015
Alignment:
Q  266 atgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| ||||||||||||| |||||  |   |||||| ||||||| ||||||||||||||||||||||||    
T  15631927 atgcatgtggtaccgaatcacctccaggtcgtcacctttgatgcctcttgaacatcatatgtaagatttcacacccgtcttacataatc 15632015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 24089275 - 24089195
Alignment:
Q  9 acatcatcataatccacataacagttaa-catgaataatttaattcaaatttcatatacttaatcaatgacaataataata 88  Q
    |||||||||||||||  ||||||||||| ||||||||| | ||||||||| |||| |||||||||||||| ||||||||||    
T  24089275 acatcatcataatccgtataacagttaaacatgaataaatcaattcaaatatcatgtacttaatcaatgataataataata 24089195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 32102 - 32040
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaat 71  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||| |||| ||||||||    
T  32102 acatcatcataatccacataacaaataacatgaataattcaattcaaatatcatgtacttaat 32040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 36892404 - 36892358
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  36892404 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 36892358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 23823277 - 23823212
Alignment:
Q  77 acaataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    ||||||||||||||| || |||| ||||| |||||||||||||||| ||||| |||||||||||||    
T  23823277 acaataataatacataatgacaaatccaaatatcacaaccaatcactcacaaccacaagtatgtca 23823212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 23825221 - 23825156
Alignment:
Q  77 acaataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    ||||||||||||||| || |||| ||||| |||||||||||||||| ||||| |||||||||||||    
T  23825221 acaataataatacataatgacaaatccaaatatcacaaccaatcactcacaaccacaagtatgtca 23825156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 22654433 - 22654484
Alignment:
Q  113 aaccaatcacccacaatcacaagtatgtcataataatcatacatgataacaa 164  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  22654433 aaccaatcacccacaatcacaagtacgtcataatattaatacatgataacaa 22654484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 25877662 - 25877615
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacctt 303  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  25877662 tgacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacctt 25877615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 16294484 - 16294374
Alignment:
Q  172 tatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatatgc 269  Q
    |||||||| ||| |||||||||||||||| ||||| || | || ||||||| |||||||||| |||| |||||||| |||||  || |||||||| ||||    
T  16294484 tatcacaatcaatcactcacaaccacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgcccctagacacgacacataaatgc 16294385  T
Q  270 atgtggtaccg 280  Q
    ||| |||||||    
T  16294384 atgcggtaccg 16294374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 22273413 - 22273513
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  22273413 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 22273512  T
Q  353 c 353  Q
    |    
T  22273513 c 22273513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 22282646 - 22282746
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  22282646 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 22282745  T
Q  353 c 353  Q
    |    
T  22282746 c 22282746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 22581858 - 22581795
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatc 72  Q
    |||||||||||||||||||||||  |||||||||||||| |||| |||| |||| || ||||||    
T  22581858 acatcatcataatccacataacaaataacatgaataattcaatttaaatatcatttatttaatc 22581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 24573320 - 24573257
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatc 72  Q
    |||||||||||||||||||||||  |||||||||||||| |||| |||| |||| || ||||||    
T  24573320 acatcatcataatccacataacaaataacatgaataattcaatttaaatatcatgtatttaatc 24573257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 25600173 - 25600208
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  25600173 acatcatcataatccacataacagttaacatgaata 25600208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 4450171 - 4450133
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  4450171 acatcatcataatccaaataacagttaacatgaataatt 4450133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 25877882 - 25877844
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  25877882 acatcatcataatccaaataacagttaacatgaataatt 25877844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 22691650 - 22691605
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||    
T  22691650 gacacatatatgcatgtggtaccatatcacctcaaggtcttcacct 22691605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 22696297 - 22696252
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||    
T  22696297 gacacatatatgcatgtggtaccatatcacctcaaggtcttcacct 22696252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 28972272 - 28972307
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    ||||||||||||||||||||||| ||||||||||||    
T  28972272 acatcatcataatccacataacaattaacatgaata 28972307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 269422 - 269460
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  269422 acatcatcataatccaaataacaattaacatgaataatt 269460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 43644605 - 43644507
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa-aacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| ||||||||||||||||||| |||| ||  ||| |||||||||||| || | |||  |||||||||||||   |||||||||| || ||||||||    
T  43644605 tgacgcatatatgcatgtggtaccaaatctccaaaagatcgtcaccttcgttgaatcaagcacatcgtatgtaagggttcacacccgcctcacataatc 43644507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 4449928 - 4449883
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  4449928 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 4449883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 7319946 - 7319991
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  7319946 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 7319991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 19671007 - 19670970
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataa 45  Q
    |||||||||||||||||||||||||| |||||||||||    
T  19671007 acatcatcataatccacataacagttaaacatgaataa 19670970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 24296419 - 24296382
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  24296419 acatcatcataatccacataacagttagacatgaataa 24296382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 5889924 - 5889872
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  5889924 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 5889872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 11232879 - 11232827
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  11232879 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 11232827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 14908066 - 14908014
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  14908066 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 14908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 16294513 - 16294453
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtat 138  Q
    |||||||||| ||| || | || |||||||||||||| ||||||| ||||| |||||||||    
T  16294513 caataataattcataatgataaatccaagtatcacaatcaatcactcacaaccacaagtat 16294453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 21140405 - 21140453
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttc 304  Q
    ||||||||| |||||||||||||| |||| |  ||||||||||||||||    
T  21140405 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcaccttc 21140453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 21276155 - 21276107
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttc 304  Q
    ||||||||| |||||||||||||| |||| |  ||||||||||||||||    
T  21276155 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcaccttc 21276107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 22514726 - 22514674
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  22514726 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 22514674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 22692818 - 22692870
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  22692818 tgacacataaatgcatgtggtaccaaatctccataaggtcgtcacctccgatg 22692870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 22697465 - 22697517
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  22697465 tgacacataaatgcatgtggtaccaaatctccataaggtcgtcacctccgatg 22697517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 23823351 - 23823315
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaata 44  Q
    ||||||||||||||||||||||||||| |||||||||    
T  23823351 acatcatcataatccacataacagttagacatgaata 23823315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 23825295 - 23825259
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaata 44  Q
    ||||||||||||||||||||||||||| |||||||||    
T  23825295 acatcatcataatccacataacagttagacatgaata 23825259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 24966425 - 24966461
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataa 45  Q
    |||||||||||||||| |||| |||||||||||||||    
T  24966425 acatcatcataatccaaataaaagttaacatgaataa 24966461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 28777327 - 28777275
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  28777327 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 28777275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 185 - 353
Target Start/End: Complemental strand, 78548 - 78379
Alignment:
Q  185 cactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatc 284  Q
    |||||||||||||||| || || || |||||||| || |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  78548 cactcacaaccacaagtatgtcaattattccacatttaggactcatgcaacaaatgatatgtccctaaacatgacacataaatgcatgtggtactgaatc 78449  T
Q  285 acctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  78448 acctcaaggttgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 78379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 151 - 353
Target Start/End: Complemental strand, 38035371 - 38035167
Alignment:
Q  151 atacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccc 249  Q
    |||||| || |||| || || |||||||||||| ||||||||| |||||| || || ||||||||||| || |||||||||||||||| || ||||||||    
T  38035371 atacataatgacaaatccaagtatcacaaccaatcactcacaatcacaagtatgtcaatcattccacatttaggactcatgcaacaaaatgttatgtccc 38035272  T
Q  250 taatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttaca 348  Q
    ||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  38035271 taaacaagacacataaatgcatgtggtaccgaatcacctcaaggtcgtcacattcgatgcaacaaaaacatcgtatgtaagatttcacacccgttttaca 38035172  T
Q  349 taatc 353  Q
    |||||    
T  38035171 taatc 38035167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 223 - 353
Target Start/End: Complemental strand, 13378438 - 13378307
Alignment:
Q  223 ggactcatgcaacaaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcg 321  Q
    |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13378438 ggactcatgcaacaaatgatatgtccctaaacatgacacctaaatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcg 13378339  T
Q  322 tatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||| ||||||||||||||||||||||||    
T  13378338 tatgtaagatttcacacccgtcttacataatc 13378307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 173 - 353
Target Start/End: Complemental strand, 36358065 - 36357883
Alignment:
Q  173 atcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatgcat 271  Q
    ||||||||||| |||||||||||||||| || || ||||||||||| |  |||||||||||||||| || ||||||||||  ||||||||||| ||||||    
T  36358065 atcacaaccaatcactcacaaccacaagtatgtcaatcattccacattcaggactcatgcaacaaaatgttatgtccctagacatgacacataaatgcat 36357966  T
Q  272 gtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||| || |||||||||||||    
T  36357965 gtggtaccgaatcacctcaaggtcgtcatcttcgatgcaacaaaaacatcgtatgtaagatttcactccagtcttacataatc 36357883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 19601616 - 19601801
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    |||||||||||| || |||||| || |||||| || || |||||| |||| || ||||| |||| ||||| || ||||||||||| ||||||| ||| ||    
T  19601616 aaatatcacaac-aatcactcagaatcacaagtatgtcaatcatttcacatttaggacttatgcgacaaaatgttatgtccctaaacatgacatataaat 19601714  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  19601715 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacatccgtcttacataatc 19601801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 35053361 - 35053459
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  35053361 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 35053459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 349
Target Start/End: Original strand, 21193689 - 21193783
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  21193689 tgacacatatatgcatgtggtaccaaatcacctcaaggttgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacat 21193783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 37235605 - 37235507
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  37235605 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatttaagatttcacatccgtcttacataatc 37235507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 5676245 - 5676147
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  5676245 tgactcataaatgcatgtggtaccgtatcacctcaaggtcgtcaccttcaatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 5676147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 41217978 - 41218070
Alignment:
Q  262 atatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  41217978 atatatacatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagagttcacacccgtcttacataatc 41218070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 5769856 - 5769764
Alignment:
Q  258 acacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  5769856 acacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacat 5769764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 8539584 - 8539505
Alignment:
Q  275 gtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  8539584 gtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacatccgtcttacataatc 8539505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 8604823 - 8604744
Alignment:
Q  275 gtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  8604823 gtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacatccgtcttacataatc 8604744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 41213329 - 41213217
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaa-caaaacatcgtatgtaatatttcac 336  Q
    ||||||||| |||||||  ||||||||||||||||||||||| |||||||||||||||||||||   ||| |||  |||| ||| ||||||| |||||||    
T  41213329 atgatatgtgcctaatcccgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatacaataaaaatatcatatgtaagatttcac 41213230  T
Q  337 acccgtcttacat 349  Q
    |||||||||||||    
T  41213229 acccgtcttacat 41213217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 51658255 - 51658191
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatca 73  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  51658255 acatcatcataatccacataacagttaacatgaataattcaattcaaatatcatatacttaatca 51658191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 248 - 349
Target Start/End: Complemental strand, 5472036 - 5471933
Alignment:
Q  248 cctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttc-gatgcaacaaaa-catcgtatgtaatatttcacacccgtctt 345  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||||||    |||||||||||| |||| ||||||| ||||||||||||||||    
T  5472036 cctaatcccgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccccatgatgcaacaaaaacatcatatgtaagatttcacacccgtctt 5471937  T
Q  346 acat 349  Q
    ||||    
T  5471936 acat 5471933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 20821477 - 20821570
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||| | |||||||||||||||||||||   |||||||| |||||||| ||||||| ||||||| ||||||||||||    
T  20821477 gacacatatatgcatgtggtatcaaatcacctcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcacgcccgtcttacat 20821570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 22145035 - 22144942
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   |||| |||||| ||||| ||||||| ||||||||| ||||||||||    
T  22145035 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgtaacaaacacatcatatgtaaaatttcacactcgtcttacat 22144942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 37846110 - 37846012
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||||||||||| | |||| |||||||||||||   |||||||||| |||||||||||    
T  37846110 tgacacatatatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgaatcaaacacatcgtatgtaagggttcacacccgccttacataatc 37846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 20444266 - 20444364
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||||||||||| | |||| ||||| |||||||   |||||||||| |||||||||||    
T  20444266 tgacacatatatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgaatcaaacacatcttatgtaagggttcacacccgccttacataatc 20444364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 38035375 - 38035315
Alignment:
Q  82 aataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||| || |||| |||||||||||||||||||||| |||||||||||||||||||    
T  38035375 aataatacataatgacaaatccaagtatcacaaccaatcactcacaatcacaagtatgtca 38035315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 22407937 - 22407893
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  22407937 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 22407893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 49966108 - 49966152
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  49966108 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 49966152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 20929999 - 20930099
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  20929999 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatgtaacaactcaacatcgtatgtaagggttcacccccgccttacataat 20930098  T
Q  353 c 353  Q
    |    
T  20930099 c 20930099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 20956886 - 20956820
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    |||||||||||||||||||||||||| ||||||||||| | ||| ||||| |||| |||||||||||    
T  20956886 acatcatcataatccacataacagttaaacatgaataaatcaatccaaatatcatgtacttaatcaa 20956820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 2422777 - 2422732
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  2422777 tgacacatatatgcatgtggtaccaaatcacctcaaagtcgtcacc 2422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 9785943 - 9785898
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  9785943 tgacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 9785898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 20956670 - 20956625
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  20956670 gacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacct 20956625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 22226509 - 22226606
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  | || |||||||||||||   ||||| |||| |||||||||||    
T  22226509 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaagggttcacccccgccttacataatc 22226606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 22836954 - 22836909
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  22836954 gacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacct 22836909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 36358091 - 36358031
Alignment:
Q  82 aataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    |||||||||| || |||| |||||| ||||||||||||||| ||||| |||||||||||||    
T  36358091 aataatacataatgacaaatccaagaatcacaaccaatcactcacaaccacaagtatgtca 36358031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 77676 - 77630
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctc-aaggtcgtcacct 302  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  77676 gacacatatatgcatgtggtaccaaatcacctcaaaggtcgtcacct 77630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 301
Target Start/End: Original strand, 18505814 - 18505856
Alignment:
Q  259 cacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  18505814 cacatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 18505856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 22837260 - 22837195
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| ||| |||| |||||||||||    
T  22837260 acatcatcataatccacataacagttaaacatgaataaatcaattc-aatatcatgtacttaatcaa 22837195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 9786315 - 9786282
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaa 42  Q
    ||||||||||||||||||||||||||||||||||    
T  9786315 acatcatcataatccacataacagttaacatgaa 9786282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 20895434 - 20895389
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  20895434 tgacacatatatgcatgtggtaccaaatcatctcagggtcgtcacc 20895389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 15863063 - 15862991
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaa 328  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  | || |||||||||||||    
T  15863063 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaa 15862991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 22352654 - 22352753
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg--caacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  |||   ||||||||||||||   ||||| |||| |||||||||||    
T  22352654 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggacaagtcaacatcgtatgtaagggttcacccccgccttacataatc 22352753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 20252342 - 20252377
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  20252342 acatcatcataatccaaataacagttaacatgaata 20252377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 20530030 - 20530129
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgt-caccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  || ||||| | ||||||||| | |||| ||||| |||||||   |||||||||| |||||||||||    
T  20530030 tgacacatatatgcatgtggtaccaaatctccaaaacgtcgtcccccttcgatgaatcaaacacatcttatgtaagggttcacacccgccttacataatc 20530129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 22080190 - 22080225
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  22080190 acatcatcataatccaaataacagttaacatgaata 22080225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 41217544 - 41217579
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  41217544 acatcatcataatccaaataacagttaacatgaata 41217579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 18164603 - 18164685
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaa-atgatatgtccct 250  Q
    ||||||||||| ||| |||||||| ||||||| || || || ||| |||| || |||||||||| |||| |||||||||||||    
T  18164603 aaatatcacaatcaatcactcacatccacaagtatgtcaattatttcacatttaggactcatgccacaatatgatatgtccct 18164685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 21716430 - 21716468
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  21716430 acatcatcataatccaaataatagttaacatgaataatt 21716468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 27673311 - 27673357
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||| | |||| |||||| ||||||||    
T  27673311 tgacacatatatgcatgtggtaccaactcacttcaagggcgtcacct 27673357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 35524350 - 35524312
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  35524350 acatcatcataatccaaagaacagttaacatgaataatt 35524312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 21716664 - 21716709
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  || | ||||||||||||||||    
T  21716664 gacacatatatgcatgtggtaccatattatctcaaggtcgtcacct 21716709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 22837463 - 22837426
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataa 45  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22837463 acatcatcataatccacataacagttaaacatgaataa 22837426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 27673107 - 27673183
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaatttcatatacttaatcaatgacaataata 85  Q
    ||||||||||||||||||| |||||| |||||||||||  |||| ||||| |||| ||||||| |||| | |||||||    
T  27673107 acatcatcataatccacatgacagttaaacatgaataa-ataatccaaatatcatgtacttaaccaataataataata 27673183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 35524125 - 35524080
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  35524125 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 35524080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 36358174 - 36358137
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  36358174 acatcatcataatccacataacagttagacatgaataa 36358137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 38035458 - 38035421
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  38035458 acatcatcataatccacataacagttagacatgaataa 38035421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 44036537 - 44036462
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaa 328  Q
    ||||||||| |||||||||||||| |||| ||  |||||||||||||  |||| |||||   ||||||||||||||    
T  44036537 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctctgatggaacaactcaacatcgtatgtaa 44036462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 17003352 - 17003404
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  17003352 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 17003404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 35935210 - 35935158
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  35935210 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 35935158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 15914167 - 15913978
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcatt---ccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacata 264  Q
    ||||||||||||||| |||||| ||||||||| || || ||||||   ||||| || |||||||||||||||| || ||||||||||| |||||| ||||    
T  15914167 aaatatcacaaccaatcactcataaccacaagtatgtcaatcattgttccacatttaggactcatgcaacaaaatgttatgtccctaagcatgacgcata 15914068  T
Q  265 tatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  15914067 aatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 15913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 188 - 353
Target Start/End: Original strand, 13388419 - 13388586
Alignment:
Q  188 tcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcac 286  Q
    ||||||||||||| ||  | || |||||| | || |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  13388419 tcacaaccacaagtatgccaattattccatatttaggactcatgcaacaaaatgatatgtccctaaacatgacacataaatgcatgtggtaccgaatcac 13388518  T
Q  287 ctcaaggtcgtcaccttcgatgcaaca-aaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  13388519 ctcaaggtcgtcaccttcgatgcaacagaaacatcgtatgtaagatttcacacccgtattacataatc 13388586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 13376107 - 13376292
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaa-tgatatgtccctaatcatgacacatatat 267  Q
    |||||||||||| || | || |||||| |||| || || | ||||||||| || |||||||||||||||| || ||||||||||| ||||||||||| ||    
T  13376107 aaatatcacaactaatccctgacaaccgcaagtatgtcaaccattccacatttaggactcatgcaacaaaatgttatgtccctaaacatgacacataaat 13376206  T
Q  268 gcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||    
T  13376207 gcatatggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcatatgtaagatttcaca-ccgtcttacataatc 13376292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 9058275 - 9058178
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  9058275 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacactcgtcttacataatc 9058178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 26071906 - 26071809
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  26071906 gacacatatatgcatgtggtatcggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 26071809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 26095693 - 26095596
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  26095693 gacacatatatgcatgtggtatcggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 26095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 12753404 - 12753501
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  12753404 tgacacataaatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatttaagatttcacacccgtcttacataat 12753501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 3893618 - 3893716
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||    
T  3893618 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagagttcacacctgtcttacataatc 3893716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 45453896 - 45453801
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||    
T  45453896 tgacacataaatgcatgtggtaccggatcacctcaaggtcatcaccttcgatgcaacaaa--atcgtatgtaagatttcacatccgtcttacataatc 45453801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 112939 - 112840
Alignment:
Q  258 acacatatatgcatgtggtaccgaatcacctcaaggt---cgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||| |||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  112939 acacataaatgcatgtggtaccgaatcacctcaaggtcgtcgtcaccttcgatgcaacaaaaacatcgtatgtaagagttcacacccgtcttacataatc 112840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 9322707 - 9322614
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||   |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  9322707 gacacatatatgcatgtggtaccaaatcacatcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacat 9322614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 20587253 - 20587160
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  20587253 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcactcatgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacat 20587160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 8565240 - 8565128
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaa-caaaacatcgtatgtaatatttcac 336  Q
    ||||||||  |||||||  |||| |||||||||||||||||| |||||||||||||||||||||   |||||||  |||||||| ||||||| |||||||    
T  8565240 atgatatgcgcctaatcccgacaaatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgcaataaaaacatcatatgtaagatttcac 8565141  T
Q  337 acccgtcttacat 349  Q
    |||||||||||||    
T  8565140 acccgtcttacat 8565128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15629004 - 15629069
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  15629004 acatcatcataatccacataacagttaacatgaataattcaattcaaatatcatgtacttaatcaa 15629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 49049723 - 49049658
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  49049723 acatcatcataatccacataacagttaacatgaataattcaattcaaatatcatgtacttaatcaa 49049658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 349
Target Start/End: Original strand, 28718969 - 28719071
Alignment:
Q  248 cctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtctta 346  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||||||||||   |||||||| |||| |||  |||||| |||||||||| ||||||    
T  28718969 cctaatcacgacacatatatgcatgtggtaccaagtcacctcaaggtcgtcacccatgatgcaacaaaaatatcacatgtaagatttcacacctgtctta 28719068  T
Q  347 cat 349  Q
    |||    
T  28719069 cat 28719071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 45455581 - 45455515
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  45455581 acatcatcataatccaaataacagttaacatgaataatttaattcaaaaatcatatacttgatcaat 45455515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 13868080 - 13868014
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  |||| ||||| ||||||    
T  13868080 acatcatcataatccacataacagttaacatgaataattcaattcaaacatcatgtacttgatcaat 13868014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 4483269 - 4483320
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  4483269 gacacatatatgcatgtggtaccaaatcacgtcaaggtcgtcaccttcgatg 4483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 13272976 - 13273041
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    ||||||||||||| |||||||||||| ||| |||||||| ||||||||| |||| |||||||||||    
T  13272976 acatcatcataattcacataacagttgacaagaataattcaattcaaatatcatgtacttaatcaa 13273041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 15762000 - 15761903
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||| |||||||||||||| |||| ||  |||||||||||||||||||  | || |||||||||||||   |||||||||| |||||||||||    
T  15762000 tgacgcataaatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaacacatcgtatgtaagggttcacacccgccttacataatc 15761903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 44863668 - 44863712
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  44863668 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 44863712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 142094 - 142137
Alignment:
Q  258 acacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  142094 acacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 142137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 3058582 - 3058677
Alignment:
Q  258 acacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||| |||||||||||||| |||| ||  |||||||||||||||||||  | || |||||||||||||   |||||||||| |||| ||||||    
T  3058582 acacataaatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaacacatcgtatgtaagggttcacacccgccttatataatc 3058677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 280
Target Start/End: Original strand, 9641448 - 9641586
Alignment:
Q  144 aataatcatacatgataacaagtctaaatatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atga 241  Q
    |||||| || ||| |||| || || ||||||||||||||| |||||||| ||||||| ||||| || | || ||||||| |||||||||| |||| |||     
T  9641448 aataataattcataataataaatccaaatatcacaaccaatcactcacatccacaagtatatcaattattttcacaattaggactcatgccacaacatgg 9641547  T
Q  242 tatgtccctaatcatgacacatatatgcatgtggtaccg 280  Q
    ||||||||||  || ||||| || ||||||| |||||||    
T  9641548 tatgtccctagacacgacacctaaatgcatgcggtaccg 9641586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 12545802 - 12545736
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||  |||| ||||| ||||||    
T  12545802 acatcatcatagtccacattacagttaacatgaataattcaattcaaacatcatgtacttgatcaat 12545736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 15824147 - 15824105
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtca 299  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  15824147 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtca 15824105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 16572053 - 16571987
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||  |||| ||||| ||||||    
T  16572053 acatcatcataatccacataacaattaacatgaataattcaatttaaacatcatgtacttgatcaat 16571987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 16593609 - 16593675
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||  |||| ||||| ||||||    
T  16593609 acatcatcataatccacataacaattaacatgaataattcaatttaaacatcatgtacttgatcaat 16593675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 1938410 - 1938313
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  |||||||||||||| ||||  | || |||||||||||||   |||||||||  |||||||||||    
T  1938410 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctttgatgataaaacacatcgtatgtaagggttcacacccaccttacataatc 1938313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 13867731 - 13867687
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||    
T  13867731 gacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 13867687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 12545449 - 12545402
Alignment:
Q  256 tgacacatatatgcatgtggtacc-gaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12545449 tgacacatatatgcatgtggtaccaaaatcacctcaaggtcgtcacct 12545402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 7286522 - 7286484
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7286522 acatcatcataatcaacataacagttaacatgaataatt 7286484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 11285671 - 11285717
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||    
T  11285671 tgacacatatatgcatgtggtaccaaattaactcaaggtcgtcacct 11285717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 18305831 - 18305793
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  18305831 acatcatcataatccaaataacagttaacatgaataatt 18305793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 32496189 - 32496089
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| ||||  |||||||||    
T  32496189 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgcgttacataat 32496090  T
Q  353 c 353  Q
    |    
T  32496089 c 32496089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 11285348 - 11285396
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaa 56  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  11285348 acatcatgataatccacataacagttaaacatgaataattcaattcaaa 11285396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 141869 - 141904
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  141869 acatcatcataatccaaataacagttaacatgaata 141904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 2024692 - 2024727
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  2024692 acatcatcataatccaaataacagttaacatgaata 2024727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 3893381 - 3893416
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  3893381 acatcatcataatccaaataacagttaacatgaata 3893416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 12249943 - 12249908
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12249943 acatcatcataatccacataacaattaacatgaata 12249908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 15824371 - 15824336
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  15824371 acatcatcataatccaaataacagttaacatgaata 15824336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 47287976 - 47288011
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  47287976 acatcatcataatccaaataacagttaacatgaata 47288011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 125391 - 125456
Alignment:
Q  290 aaggtcgtcaccttcgatgcaacaaa--acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||| ||||||  |||||||||||||   || ||||||| |||||||||||    
T  125391 aaggtcgtcaccttcgatggaacaaatcacatcgtatgtaagggtttacacccgccttacataatc 125456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 12753172 - 12753210
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  12753172 acatcatcataatccaaataacatttaacatgaataatt 12753210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 21676677 - 21676631
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctc-aaggtcgtcacct 302  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||    
T  21676677 gacacatatatgcatgtggtaccaaatcgcctcaaaggtcgtcacct 21676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 44863443 - 44863509
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    ||||||| |||||||| ||||||||||||||||||| || |||| |||  |||| ||||| ||||||    
T  44863443 acatcattataatccaaataacagttaacatgaatatttcaatttaaacatcatgtacttgatcaat 44863509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 13376002 - 13376039
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  13376002 acatcatcataatccacataacagttagacatgaataa 13376039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 49049495 - 49049450
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   |||| |||||||||||||||    
T  49049495 gacacatatatgcatgtggtaccatttcacttcaaggtcgtcacct 49049450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 7821456 - 7821508
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  7821456 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 7821508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 7828767 - 7828819
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  7828767 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 7828819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 9641447 - 9641507
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtat 138  Q
    |||||||||| ||| |||| || ||||| |||||||||||||||| ||||  |||||||||    
T  9641447 caataataattcataataataaatccaaatatcacaaccaatcactcacatccacaagtat 9641507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 12249814 - 12249770
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||  ||||| |||| |||||||||    
T  12249814 gacacatatatgcatgtggtaccatatcacttcaaagtcgtcacc 12249770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 13038853 - 13038809
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcac 300  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||    
T  13038853 tgacacatatatgcatgtggtaccaaatcatttcagggtcgtcac 13038809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 18255455 - 18255356
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg--caacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||| |||| |||||||||||||| |||| ||  ||||||||||||| |||||  |||   ||||||||||||||   ||||| |||| |||||||||||    
T  18255455 tgactcataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggacaagtcaacatcgtatgtaagggttcacccccgccttacataatc 18255356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 27103178 - 27103126
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  27103178 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 27103126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 27110526 - 27110474
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  27110526 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 27110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 27175148 - 27175200
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  27175148 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 27175200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 38785270 - 38785218
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  38785270 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 38785218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 47288201 - 47288245
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| ||||| | |||||| ||||||    
T  47288201 gacacatatatgcatgtggtaccaaatcatcccaaggttgtcacc 47288245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 118335 - 118151
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatg 268  Q
    |||||||||||||||||| ||||| ||||||| || || || |||| ||| || ||||||||||||||| |||||||||||||| |||||||||||||||    
T  118335 aaatatcacaaccaaacattcacagccacaagtatgtcaattattcaacatttaggactcatgcaacaa-tgatatgtccctaaacatgacacatatatg 118237  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| || ||||||||||||    
T  118236 catgtggtactgaatcacctcaaggtcgtcaccttcgattcaacaaaaacatcgtatgtaagatttcacagccatcttacataatc 118151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 163857 - 163903
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  163857 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 163903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 118440 - 118403
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  118440 acatcatcataatccacataacagttagacatgaataa 118403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 33904 - 34091
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattg-ggactcatgcaacaaa-tgatatgtccctaatcatgacacatata 266  Q
    |||| |||||||||| ||||| |||||||||| || || || |||||||||||  |||||||||||||||| |||||| ||||||| ||||||||||| |    
T  33904 aaatgtcacaaccaatcactcgcaaccacaagtatgtcaattattccacaatttaggactcatgcaacaaaatgatatatccctaaacatgacacataaa 34003  T
Q  267 tgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    | ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  34004 tacatgtggtaccgaatcacctcaaagtcgtcaccttcgatgcaacaaaaacatcgtatgtaacatttcacacctgtcttacataatc 34091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 5082 - 4899
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatg 268  Q
    ||||||||||||||||||  || ||||||||| || || || |||||||| || ||||||||||||||| | |||||||| ||| ||||||||||| |||    
T  5082 aaatatcacaaccaaacatacataaccacaagtatgtcaattattccacatttaggactcatgcaacaatt-atatgtccttaaacatgacacataaatg 4984  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  4983 catgtggtaccgaatcacctcaaggtcgtcacctt-gatgcaacaaaaacatcgtatgtaagatttcacacccgtcatacataatc 4899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 86; Significance: 5e-41; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 78121 - 78300
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatg 268  Q
    ||||||||||  |||| | ||||||||||||| || || || ||  ||||  | ||||||||||||||| |||||||||||||||||||||||||| |||    
T  78121 aaatatcacattcaaatattcacaaccacaagtatgtcaattatctcacatataggactcatgcaacaa-tgatatgtccctaatcatgacacataaatg 78219  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||     ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  78220 catgtggt-----atcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccatcttacataatc 78300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 91018 - 90980
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  91018 acatcatcataatccaaataacagttaacatgaataatt 90980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 90644 - 90599
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||| ||||||| |||||||||| ||||||||||    
T  90644 tgacacatatatgcatttggtaccaaatcacctcagggtcgtcacc 90599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 128917 - 128969
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  128917 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 86; Significance: 5e-41; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 138449 - 138352
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  138449 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaatatttcacacccgtcttacataatc 138352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 9876 - 9940
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatca 73  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||  |||||||||||||||    
T  9876 acatcatcataatccacataatagttaacatgaataattcaattcaaaactcatatacttaatca 9940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 76809 - 76855
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  76809 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 76855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 76589 - 76624
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  76589 acatcatcataatccaaataacagttaacatgaata 76624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 13834 - 13736
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  13834 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 13736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 14154 - 14119
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    ||||||||||||||||||||| ||||||||||||||    
T  14154 acatcatcataatccacataatagttaacatgaata 14119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 15972 - 16071
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg--caacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||| | |||| ||  ||||||||||||| |||||  |||   ||||||||||||||   ||||| |||| |||||||||||    
T  15972 tgacacataaatgcatgtggtatcaaatctccaaaaggtcgtcacctccgatggacaagtcaacatcgtatgtaagggttcacccccgccttacataatc 16071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 4466 - 4649
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaaatgatatgtccctaatcatgacacatatatg 268  Q
    |||||||||| ||||| | ||||||||||||| || || || ||| ||||  | ||| || |||||||| |||||||||||||| |||| |||||| ||     
T  4466 aaatatcacatccaaatattcacaaccacaagtatgtcaattatttcacatataggaatcgtgcaacaa-tgatatgtccctaagcatggcacataaata 4564  T
Q  269 catgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    || ||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||    
T  4565 caagtggtactgaatcacctccaggtcgtcaccttcgatgcatcaacacatcgtatgtaagatttcacactcgtcttacataatc 4649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 4327 - 4364
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  4327 acatcatcataatccacataacagttatacatgaataa 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 3181 - 3279
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  3181 tgacacatacatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 3279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 60096 - 60194
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  60096 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 60194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 59865 - 59900
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  59865 acatcatcataatccaaataacagttaacatgaata 59900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 3938 - 3841
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  3938 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttatataatc 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 68850 - 68947
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  68850 gacacatatatgcatgtggtaccatatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 68947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 68597 - 68632
Alignment:
Q  12 tcatcataatccacataacagttaacatgaataatt 47  Q
    ||||||||||||||||||||||||||||||||||||    
T  68597 tcatcataatccacataacagttaacatgaataatt 68632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 30314 - 30367
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcat 62  Q
    |||||||||||||| | |||| | ||||||||||||||| ||||||||| ||||    
T  30314 acatcatcataatctatataataattaacatgaataattcaattcaaatatcat 30367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 4651 - 4749
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  4651 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacataatc 4749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 4425 - 4461
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataa 45  Q
    |||||||||||||||| |||||| |||||||||||||    
T  4425 acatcatcataatccaaataacaattaacatgaataa 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 12720 - 12818
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  12720 tgacacataaatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgccttacataatc 12818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 12488 - 12523
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  12488 acatcatcataatccaaataacagttaacatgaata 12523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 7955 - 8052
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  7955 gacacataaatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacaaccgtcttacataatc 8052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 6069 - 6166
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  6069 gacacatacatgcatgtggtaccaaatcacctcaaggtcgtcaccttcgatgcaacaaaaatatcgtatgtaagatttcacacccgtcttacataatc 6166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 5845 - 5892
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaa 56  Q
    ||||||| |||||||| ||||||||||||||||||| || ||||||||    
T  5845 acatcattataatccaaataacagttaacatgaatatttcaattcaaa 5892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 37985 - 38082
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  37985 gacacgtacatgcatgtggtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 38082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 3148 - 3245
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||| || |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  3148 gacacgtacatgcatgtggtaccaaatcacctcaagctcgtcaccttcgatgcaacaaaaacatcgtatgtaaaatttcacacccgtcttacataatc 3245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 2475 - 2510
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  2475 acatcatcataatccaaataacagttaacatgaata 2510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 14201 - 14298
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||||||||    
T  14201 gacacataaatgcatgtggtaccaaatcacctcaaggtcgtcatcttcgatgcaacaaaaacatcgtatgtaagatttgacacccgtcttacataatc 14298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 13964 - 14030
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||||| ||||||||| |||||||||||||||||||||| |||||| |  |||| ||||| ||||||    
T  13964 acatcaacataatccaaataacagttaacatgaataattcaattcagacatcatgtacttgatcaat 14030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 5756 - 5853
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||| || |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  5756 gacacgtacatgcatgtggtaccaaatcacctcaagctcgtcaccttcgatgcaacaaaaacatcgtatgtaaaatttcacacccgtcttacataatc 5853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 5339 - 5374
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  5339 acatcatcataatccaaataacagttaacatgaata 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 899 - 951
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  899 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 3280 - 3377
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||    
T  3280 gacacatatatgcatgtggtaccaaatcacctctaggtcgtcaccttcgatgcaacaaaaacattgtatgtaagatttcacgcccgtcttacataatc 3377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 8601 - 8698
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  8601 gacacatatatgcatgtggtaccaaatcacctcaaggccgtcacctccgattcaacaaaaacatcgtatgtaagatttcacacccgtcttacataatc 8698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 8387 - 8425
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  8387 acatcatcataatccaaataacaattaacatgaataatt 8425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 27097 - 27194
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  27097 gacacataaatgcatgtagtaccggatcacctcaaggtcgtcaccttcgatgcaacaaaaacatcgtatgtaagatttcacacccatcttacataatc 27194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 26873 - 26918
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattca 54  Q
    |||||| |||| |||| |||||||||||||||||||||| ||||||    
T  26873 acatcaacatagtccaaataacagttaacatgaataattcaattca 26918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 25255 - 25158
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||  ||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  25255 gacacatatatgcatgtggtacaaaatcacctcaaggtcgtcaccttaaatgcaacaaaaatatcgtatgtaagatttcacacccgtcttacataatc 25158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 84943 - 85036
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  84943 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcacacccgtcttacat 85036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 349
Target Start/End: Original strand, 26062 - 26174
Alignment:
Q  238 atgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcac 336  Q
    ||||||||  |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||   |||||||| |||||||| ||||||| |||||||    
T  26062 atgatatgcgcctaatcacgacacatatatgcatgtggtaccaaatcacctaaaggtcgtcacccatgatgcaacaaaaacatcatatgtaagatttcac 26161  T
Q  337 acccgtcttacat 349  Q
    || ||||||||||    
T  26162 acacgtcttacat 26174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 197733 - 197636
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| || ||||||||||| |||| ||  |||||||||||||||||||  | || |||||||||||||   |||||||||| |||||||||||    
T  197733 tgacacataaatacatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaagacatcgtatgtaagggttcacacccgccttacataatc 197636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 191 - 305
Alignment:
Q  235 caaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatattt 333  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||| |||||||||||||||||||||   |||| |||||| ||||| ||||||| ||||    
T  191 caaatgatatgtgcctaaacc-gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgtaacaaacacatcatatgtaagattt 289  T
Q  334 cacacccgtcttacat 349  Q
    ||||||||||||||||    
T  290 cacacccgtcttacat 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 5246 - 5360
Alignment:
Q  235 caaatgatatgtccctaatcatgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatattt 333  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||| |||||||||||||||||||||   |||| |||||| ||||| ||||||| ||||    
T  5246 caaatgatatgtgcctaaacc-gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgtaacaaacacatcatatgtaagattt 5344  T
Q  334 cacacccgtcttacat 349  Q
    ||||||||||||||||    
T  5345 cacacccgtcttacat 5360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 56461 - 56559
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||||||  ||||||||||| ||||||||||| |||||||||||||||| | |||| |||||||||||||||||    
T  56461 tgacacataaatgcatgtggtaccaaatcaccaaaaggtcgtcacattcgatgcaacaaaaacatcgtatgtaagaattcaaacccgtcttacataatc 56559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 56206 - 56272
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||  |||| ||||| ||||||    
T  56206 acatcatcataatccaaataacagttaacatgaataattcaattcaaacatcatgtacttgatcaat 56272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 3800 - 3893
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa-acatcgtatgtaatatttcacacccgtcttacat 349  Q
    ||||||||||||||||||||||| |||||||||||||||||||||   |||| |||||| ||||| ||||||| ||||||||||||||||||||    
T  3800 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacccatgatgtaacaaacacatcatatgtaagatttcacacccgtcttacat 3893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 249182 - 249081
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggt---cgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataa 351  Q
    ||||||||| ||||||||||||||  |||||||||||||   |||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||    
T  249182 tgacacataaatgcatgtggtaccagatcacctcaaggtcgtcgtcaccttcgatgcaacaaaaacatcttatgtaagagttcacacccgtcttacataa 249083  T
Q  352 tc 353  Q
    ||    
T  249082 tc 249081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 53; Significance: 2e-21; HSPs: 5)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 353
Target Start/End: Complemental strand, 24065 - 23972
Alignment:
Q  254 catgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||| |||||||||||||||||||||||| |       |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  24065 catgacacataaatgcatgtggtaccgaatcacctccat------accttcgatgcatcaacacatcgtatgtaagatttcacacccgtcttacataatc 23972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 15271 - 15228
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaatt 52  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  15271 acatcatcataatccaaataacagttaacatgaataattcaatt 15228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 26451 - 26486
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  26451 acatcatcataatccaaataacagttaacatgaata 26486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 15050 - 15005
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||    
T  15050 tgacacatatatgcatgtggtacaaaatcatctcagggtcgtcacc 15005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 24280 - 24243
Alignment:
Q  9 acatcatcataatccacataacagtta-acatgaataa 45  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  24280 acatcatcataatccacataacagttatacatgaataa 24243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 1676 - 1787
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatat 267  Q
    |||||||| |||||| |||||||| ||||||| || || || ||| |||| || ||||||||||||||| ||||||||||||||| ||||| ||||| ||    
T  1676 aaatatcataaccaatcactcacatccacaagtatgtcaattatttcacatttaggactcatgcaacaatatgatatgtccctaaacatgagacataaat 1775  T
Q  268 gcatgtggtacc 279  Q
    ||||||||||||    
T  1776 gcatgtggtacc 1787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 236703 - 236801
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| ||||||||||||||  |||||||| ||||||||||||||||||| ||   |||||||||||||| ||||||||||  ||||||||||||    
T  236703 tgacacataaatgcatgtggtaccttatcacctctaggtcgtcaccttcgatgctactttaacatcgtatgtaagatttcacacctttcttacataatc 236801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 270649 - 270749
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||| ||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  270649 tgacacataaatgcatgtggtaccaaatctccaaaagatcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 270748  T
Q  353 c 353  Q
    |    
T  270749 c 270749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 3395 - 3330
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaa 74  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||| |||||||||||    
T  3395 acatcatcataatccacataatagttaacatgaataattcaattcaaatatcatgtacttaatcaa 3330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 14255 - 14162
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||| ||| |||||||||||||| ||||||||||||||||| |||   |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  14255 gacagatacatgcatgtggtaccaaatcacctcaaggtcgttacccatgatgcaacaaaaacatcatatgtaaaatttcacacccgtcttacat 14162  T

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Target: scaffold0700 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 1016 - 1128
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaac-aaatgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| |||||||| ||||||| || || || ||| |||| || ||||||||||||| | ||||||||||||||| || |||||||| ||    
T  1016 aaatatcacaaccaatcactcacatccacaagtatgtcaattatttcacatttaggactcatgcaacgatatgatatgtccctaaacacgacacataaat 1115  T
Q  268 gcatgtggtaccg 280  Q
    ||||| |||||||    
T  1116 gcatgcggtaccg 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 104377 - 104489
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatcattccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatat 267  Q
    ||||||||||||||| |||||||||||||||| || || || ||| |||| || |||||||||| |||| ||||||||||||||  || |||||||| ||    
T  104377 aaatatcacaaccaatcactcacaaccacaagtatgtcaattatttcacatttaggactcatgccacaatatgatatgtccctagacacgacacataaat 104476  T
Q  268 gcatgtggtaccg 280  Q
    ||||| |||||||    
T  104477 gcatgcggtaccg 104489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 104352 - 104415
Alignment:
Q  79 aataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtatgtca 142  Q
    ||||||||| ||| || | || ||||| |||||||||||||||| ||||| |||||||||||||    
T  104352 aataataattcataatgataaatccaaatatcacaaccaatcactcacaaccacaagtatgtca 104415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 11663 - 11566
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  |||||||||||||||||||  | || |||||||||||||   |||||||||| |||||||||||    
T  11663 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatgataaaacacatcgtatgtaagggttcacacccgccttacataatc 11566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 6984 - 7064
Alignment:
Q  12 tcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaatgacaataataatacatg 92  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||| ||||| |||||| | |||| | |||||||    
T  6984 tcatcataatccacataacagttaacatgaataattcaattcaaacatcatgtacttgatcaataataatattcatacatg 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 7254 - 7300
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  7254 tgacacatatatgcatgtggtactaaatcacctcaaggtcgtcacct 7300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 145060 - 145159
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa--aacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||||||||||| |||||   |||||||||||||   ||||| |||| |||||||||||    
T  145060 tgacacatatatgcatgtggtaccaaatctccaaaaggtcgtcaccttcgatggaacaactcacatcgtatgtaagggttcacccccgccttacataatc 145159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 147319 - 147418
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa--aacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||||||||||||| |||| ||  |||||| |||||||||||| |||||   |||||||||||||   ||||| |||| |||||||||||    
T  147319 tgacacatatatgcatgtggtaccaaatctccaaaaggtcatcaccttcgatggaacaactcacatcgtatgtaagggttcacccccgccttacataatc 147418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 7299 - 7346
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaa 56  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7299 acatcatcataatccacataacagttaacatgaataattcaattcaaa 7346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 28535 - 28645
Alignment:
Q  172 tatcacaaccaaacactcacaaccacaagcatatcga-tcattccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatatgc 269  Q
    |||||||||||| |||||||||||||||| ||||| | |  || ||||||| |||||||||| |||| |||||||| |||||  || |||||||| ||||    
T  28535 tatcacaaccaatcactcacaaccacaagtatatcaactattttcacaattaggactcatgccacaatatgatatggccctagacacgacacataaatgc 28634  T
Q  270 atgtggtaccg 280  Q
    |||||||||||    
T  28635 atgtggtaccg 28645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 280
Target Start/End: Original strand, 20551 - 20661
Alignment:
Q  172 tatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatatatgc 269  Q
    |||||||||||| ||||||||| |||||| ||||| || | || ||||||| |||||||||| |||| |||||||| |||||  || |||||||| ||||    
T  20551 tatcacaaccaatcactcacaatcacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgcccctatacacgacacataaatgc 20650  T
Q  270 atgtggtaccg 280  Q
    ||| |||||||    
T  20651 atgcggtaccg 20661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 20522 - 20582
Alignment:
Q  78 caataataatacatgataacaattccaagtatcacaaccaatcacccacaatcacaagtat 138  Q
    |||||||||| ||| || | || | |||||||||||||||||||| |||||||||||||||    
T  20522 caataataattcataatgataaattcaagtatcacaaccaatcactcacaatcacaagtat 20582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 26460 - 26414
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  26460 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 26414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 71003 - 70939
Alignment:
Q  290 aaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||||||  ||||||||||||    
T  71003 aaggtcgtcaccttcgatgcaacaaaaacatcgtatggaagatttcacacctatcttacataatc 70939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Complemental strand, 66360 - 66322
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggt 294  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  66360 tgacacataaatgcatgtggtaccggatcacctcaaggt 66322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 256604 - 256558
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  256604 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacct 256558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 18107 - 18152
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  18107 tgacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 18152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 17735 - 17782
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaa 56  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  17735 acatcatcaaaatccacataacagttaacatgaataattcaattcaaa 17782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 4067 - 4132
Alignment:
Q  9 acatcatcataatccacataacagtt-aacatgaataatttaattcaaatttcatatacttaatca 73  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||||| |||| ||||||||||    
T  4067 acatcatcataatccacataacagttaaacatgaataaatcaattcaaatatcatgtacttaatca 4132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 3750 - 3706
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  3750 gacacatatatgcatgtggtaccaaatcacctcaaggtcgtcacc 3706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 55922 - 56006
Alignment:
Q  266 atgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaac-aaaacatcgtatgtaatatttcacacccgtcttacat 349  Q
    |||||||||||||  |||| ||||||||||||||||   |||||||| |||| ||| ||||||| ||||||||||||||||||||    
T  55922 atgcatgtggtacaaaatcccctcaaggtcgtcacccatgatgcaacaaaaatatcatatgtaagatttcacacccgtcttacat 56006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 75727 - 75680
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaa 56  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  75727 acatcatcataatccaaataatagttaacatgaataatttaattcaaa 75680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 72150 - 72104
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||||    
T  72150 tgacgcataaatgcatgtggtaccggatcacctcaaggtcgtcacct 72104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1753 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1753
Description:

Target: scaffold1753; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 1 - 90
Alignment:
Q  266 atgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaa--acatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    |||||||||||||| |||| ||  ||| ||||||||||||||| ||||||  |||||||||||||   |||||||||| |||||||||||    
T  1 atgcatgtggtaccaaatctccaaaagctcgtcaccttcgatggaacaaatcacatcgtatgtaagggttcacacccgccttacataatc 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 2763 - 2663
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  |||||||||||||  |||| |||||   ||||||||||||||   ||||| |||||||||||||||    
T  2763 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctctgatggaacaactcaacatcgtatgtaagggttcacccccgtcttacataat 2664  T
Q  353 c 353  Q
    |    
T  2663 c 2663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 4382 - 4282
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  4382 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 4283  T
Q  353 c 353  Q
    |    
T  4282 c 4282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 4831 - 4796
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  4831 acatcatcataatccaaataacagttaacatgaata 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 607 - 707
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  607 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 706  T
Q  353 c 353  Q
    |    
T  707 c 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 3055 - 3093
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3055 acatcatcataatccacataacagttaacatgaataatt 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 3475 - 3519
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  3475 gacacatatatgcatgtggtaccaaatcacctcagggtcgtcacc 3519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 32824 - 32724
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  32824 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 32725  T
Q  353 c 353  Q
    |    
T  32724 c 32724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 49222 - 49122
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  49222 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 49123  T
Q  353 c 353  Q
    |    
T  49122 c 49122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 49671 - 49636
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  49671 acatcatcataatccaaataacagttaacatgaata 49636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 1652 - 1714
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaat 71  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| |||  |||| ||||||||    
T  1652 acatcatcataatccacataacaattaacatgagtaatttaatttaaacatcatgtacttaat 1714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 40020 - 40120
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  40020 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcacccccgccttacataat 40119  T
Q  353 c 353  Q
    |    
T  40120 c 40120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 30650 - 30688
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30650 acatcatcataatccacataacagttaacatgaataatt 30688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 31047 - 31091
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  31047 gacacatatatgcatgtggtaccaaatcacctcagggtcgtcacc 31091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 1090 - 1045
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  1090 tgacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 1045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 31260 - 31305
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  31260 tgacacatatatgcatgtggtaccaaatcacctcagggtcgtcacc 31305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 28283 - 28328
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  28283 tgacacatatatgcatgtggtaccaaatcacctcagggtcgtcacc 28328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 54169 - 54266
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||| |||||||  | || |||||||||||||   |||||||||  |||||||||||    
T  54169 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcactttcgatgataaaacacatcgtatgtaagggttcacacccagcttacataatc 54266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 109713 - 109614
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg--caacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  |||   ||||||||||||||   ||||| ||||||||||||||||    
T  109713 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggacaagtcaacatcgtatgtaagggttcacccccgtcttacataatc 109614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 13477 - 13433
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  13477 gacacatatatgcatgtggtaccaaatcacttcaaggtcgtcacc 13433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 13740 - 13705
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  13740 acatcatcataatccaaataacagttaacatgaata 13705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 20949 - 20905
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  20949 gacacatatatgcatgtggtaccaaatcacctcagggtcgtcacc 20905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 21085 - 21129
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||    
T  21085 gacacatatatgcatgtggtaccaaatctcctcaaggtcgtcacc 21129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 20860 - 20895
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  20860 acatcatcataatccaaataacagttaacatgaata 20895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 28450 - 28485
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  28450 acatcatcataatccaaataacagttaacatgaata 28485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 28675 - 28718
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcac 300  Q
    |||||||||||||||||||| || |||| |||||||||||||||    
T  28675 gacacatatatgcatgtggtgccaaatctcctcaaggtcgtcac 28718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 7056 - 7013
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcac 300  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  7056 gacacatatatgcatgtggtaccaaataacctcaaggtcgtcac 7013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 6891 - 6937
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaa 55  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||    
T  6891 acatcatcataatccatataacagttaacatgaataagtcaattcaa 6937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 144987 - 145053
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatcaat 75  Q
    |||| |||||||||||||||||| ||||||||| ||||| ||||||||  |||| ||||| ||||||    
T  144987 acattatcataatccacataacaattaacatgattaattcaattcaaacatcatgtacttgatcaat 145053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 217381 - 217282
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaa---aacatcgtatgtaatatttcacacccgtcttacataat 352  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| ||||| |||||   ||||||||||||||   ||||| |||| ||||||||||    
T  217381 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggaacaactcaacatcgtatgtaagggttcac-cccgccttacataat 217283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 99652 - 99689
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggt 294  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  99652 gacacatatatgtatgtggtaccaaatcacctcaaggt 99689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 758 - 803
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||    
T  758 tgacacatatatgcatgtggtaccaaatctcctaaaggtcgtcacc 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 2881 - 2837
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||    
T  2881 gacacatatatgcatgtggtacc-attcacctcaaggtcgtcacct 2837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 28350 - 28447
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||| ||| |||| ||  ||||||||||||| |||||  | || |||||||||||||   ||||| |||| |||||||||||    
T  28350 tgacacataaatgcatgtggcaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaagggttcacccccgccttacataatc 28447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 14829 - 14926
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||| ||| |||| ||  ||||||||||||| |||||  | || |||||||||||||   ||||| |||  |||||||||||    
T  14829 tgacacataaatgcatgtggaaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaagggttcacccccaccttacataatc 14926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 3452 - 3339
Alignment:
Q  169 aaatatcacaaccaaacactcacaaccacaagcatatcgatca-ttccacaattgggactcatgcaacaa-atgatatgtccctaatcatgacacatata 266  Q
    ||||||||||||||| ||||| |  ||||||||||||| || | || ||||||| |||||||||| |||| |||||||| |||||  || |||||||| |    
T  3452 aaatatcacaaccaatcactcgcgtccacaagcatatcaattattttcacaattaggactcatgctacaatatgatatgcccctagacacgacacataaa 3353  T
Q  267 tgcatgtggtaccg 280  Q
    | |||| |||||||    
T  3352 ttcatgcggtaccg 3339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 26584 - 26540
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||    
T  26584 gacacatatatgcatgtggtacc-attcacctcaaggtcgtcacct 26540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 32050 - 32095
Alignment:
Q  257 gacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||||   ||||||||||||||||||||    
T  32050 gacacatatatgcatgtggtaccatttcacctcaaggtcgtcacct 32095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 1417 - 1345
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatgcaacaaaacatcgtatgtaa 328  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  | || |||||||||||||    
T  1417 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatgataaaacacatcgtatgtaa 1345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 6352 - 6308
Alignment:
Q  258 acacatatatgcatgtggtaccgaatcacctcaaggtcgtcacct 302  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||    
T  6352 acacatatatgcatgtggtaccaaatcatctcagggtcgtcacct 6308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 4370 - 4469
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg--caacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  |||   ||||||||||||||   ||||| |||| |||||||||||    
T  4370 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggacaagtcaacatcgtatgtaagggttcacccccgccttacataatc 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 353
Target Start/End: Complemental strand, 5230 - 5131
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg--caacaaaacatcgtatgtaatatttcacacccgtcttacataatc 353  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||  |||  |||||||||||||||   |||||  ||| |||||||||||    
T  5230 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatggacaagtaaacatcgtatgtaagggttcactgccgccttacataatc 5131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 92252 - 92308
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaattcaaatttcatata 65  Q
    ||||||||||||||||||||||||||||||| |||| || |||| ||| | ||||||    
T  92252 acatcatcataatccacataacagttaacataaatatttaaatttaaactccatata 92308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 155981 - 155929
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| ||  ||||||||||||| |||||    
T  155981 tgacacataaatgcatgtggtaccaaatctccaaaaggtcgtcacctccgatg 155929  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 4725 - 4690
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4725 acatcatcataatccacataacatttaacatgaata 4690  T

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Target: scaffold0191 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 683 - 648
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  683 acatcatcataatccaaataacagttaacatgaata 648  T

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Target: scaffold0158 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 16376 - 16411
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  16376 acatcatcataatccaaataacagttaacatgaata 16411  T

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Target: scaffold0158; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 23040 - 23075
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaata 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  23040 acatcatcataatccaaataacagttaacatgaata 23075  T

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Target: scaffold0106 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 37627 - 37670
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatttaatt 52  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||    
T  37627 acattatcataatccaaataacagttaacatgaataattcaatt 37670  T

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Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 40054 - 40099
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcacc 301  Q
    ||||||||| |||||||||||||| |||||||||| ||| ||||||    
T  40054 tgacacataaatgcatgtggtaccaaatcacctcagggttgtcacc 40099  T

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Target: scaffold0342 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 4078 - 4116
Alignment:
Q  9 acatcatcataatccacataacagttaacatgaataatt 47  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  4078 acatcatcataatcaaaataacagttaacatgaataatt 4116  T

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Target: scaffold0601 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 2621 - 2576
Alignment:
Q  258 acacatatatgcatgtggtaccgaatcacctc-aaggtcgtcacct 302  Q
    |||||||||||| ||||||||| ||||||||| |||||||||||||    
T  2621 acacatatatgcgtgtggtaccaaatcacctcaaaggtcgtcacct 2576  T

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Target: scaffold0589 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 6123 - 6179
Alignment:
Q  16 cataatccacataacagttaacatgaataatttaattcaaatttcatatacttaatc 72  Q
    |||||||||||||| | ||||||||| ||||| |||| |||| |||| |||||||||    
T  6123 cataatccacataaaaattaacatgagtaattcaatttaaatatcatgtacttaatc 6179  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 37818 - 37870
Alignment:
Q  256 tgacacatatatgcatgtggtaccgaatcacctcaaggtcgtcaccttcgatg 308  Q
    ||||||||| |||||||||||||| |||| |  |||||||||||||| |||||    
T  37818 tgacacataaatgcatgtggtaccaaatctcaacaaggtcgtcacctccgatg 37870  T

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