View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6440_high_10 (Length: 238)
Name: NF6440_high_10
Description: NF6440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6440_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 36246660 - 36246885
Alignment:
| Q |
1 |
ttctatcctaaattcatctctctatgcctctacctcatcatcacaaatgaacatccaaaggctaattggtacacaatcaatagtgaaccctgagattcta |
100 |
Q |
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| T |
36246660 |
ttctatcctaaattcatctctctatgcctctacctcatcatcacaaatgaacatccaaaggctaattggtacacaatcaatagtgaaccctgagattcta |
36246759 |
T |
|
| Q |
101 |
aagttggcttcatcactcttctcttctcaaaatggacaagagaatcaccaaattgatcacaaacaacaaattagctcacacatggatcaagaagcatgca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36246760 |
aagttggcttcatcactcttctcttctcaaaatggacaagagaatcaccaaattgatcacaaacaacaaattagctcacacatggatcaagaagcatgca |
36246859 |
T |
|
| Q |
201 |
ccatgttgttgaatccaccttttgat |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
36246860 |
ccatgttgttgaatccaccttttgat |
36246885 |
T |
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