View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6441_low_13 (Length: 241)
Name: NF6441_low_13
Description: NF6441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6441_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 53744601 - 53744834
Alignment:
| Q |
1 |
tcggagcagcggagtcttctccttcagcgcgattccggtaaagagttgctccagcggaaggatcttgaagacgaatggaatcacgcattgcgaagcgaag |
100 |
Q |
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| T |
53744601 |
tcggagcagcggagtcttctccttcagcgcgattccggtaaagagtttctccggcggaaggatcttgaagacgaatggaatcacgcattgcaaagcgaag |
53744700 |
T |
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| Q |
101 |
atactgtggcaaagtaagctgtttcttcaagtcttctttgtcaatacgcatgccggagagaccgcagccgcgaattgattcaacgagtgatgaacgagct |
200 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
53744701 |
atactgtggcaaagtaagctgcttcttcaagtcttctttgtcaatacgcatgccggagagaccgcagccgcgaattgattcaacgagtgatgaacgaact |
53744800 |
T |
|
| Q |
201 |
tgtatcttctttgaatcttccgtcgttgatgatg |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
53744801 |
tgtatcttctttgaatcttccgtcgttgatgatg |
53744834 |
T |
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