View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6447_high_44 (Length: 210)
Name: NF6447_high_44
Description: NF6447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6447_high_44 |
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Alignment Details
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 17 - 194
Target Start/End: Complemental strand, 44578867 - 44578690
Alignment:
| Q |
17 |
ctgtgatcagagtatgtcaatgacagattatggtaagggagagagggggaaaatttgtacaagtgaggaagatgagcctagttttatggaggatggtttt |
116 |
Q |
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| T |
44578867 |
ctgtgatcagagtatgtcaatgacagattatggtaagggagagagggggaaaatttgtacaagtgaggaagatgagcctagttttatggaggatggtttt |
44578768 |
T |
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| Q |
117 |
gatggtcaacatgaagggggtagaggtaaaaagggatcatcgtcgccttggcagcgtgtgaagtggactgataatatg |
194 |
Q |
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| T |
44578767 |
gatggtcaacatgaagggggtagaggtaaaaaaggatcgtcgtcgccttggcagcgtgtgaagtggactgataatatg |
44578690 |
T |
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