View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6447_low_22 (Length: 262)
Name: NF6447_low_22
Description: NF6447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6447_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 5297431 - 5297667
Alignment:
| Q |
19 |
acacaatgccaaaataactaattaataataattgtataaagccaagtaaacagtctcaagttacagtagcagttccagagtatggttgcatggaattata |
118 |
Q |
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| T |
5297431 |
acacaatgccaaaataactaattaataataattgtataaagccaagtaaacagtctcaagttacagtagcagttccagagtttggttgcatggaattata |
5297530 |
T |
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| Q |
119 |
gatataactgttaaaaagtagatagcattaaaatttccttgttgcaaagcagaggcttttgtccttagcaacataatatggcaaaactagttgtttgata |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
5297531 |
gatataactgttaaaaagtagatagcattaaaatttccttgttgcaaagcagaggcttttgtccttagctacataatatggcaaaactagttgtttgata |
5297630 |
T |
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| Q |
219 |
ccgtacgtgtaagaatttctgccttatgcctatgcta |
255 |
Q |
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|||||||||||||||||||||||||||| |||||||| |
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| T |
5297631 |
ccgtacgtgtaagaatttctgccttatgtctatgcta |
5297667 |
T |
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