View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6453A_high_11 (Length: 254)
Name: NF6453A_high_11
Description: NF6453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6453A_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 36702309 - 36702546
Alignment:
| Q |
1 |
aattgttaggttggatgccaaagtgaaaatatttacatgttagctttcttgcttgcttaattatttctttgcaccatatatagattaattaagtcatctt |
100 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
36702309 |
aattgttaagttggatgccaaagtgaaaatatttacatgttagctttcttgcttgcttaattatttctttgcaccatat--agattaattaagtcatctt |
36702406 |
T |
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| Q |
101 |
atagttgtctcttgttaataatctatagcctcgtcgattggatttgaccgtgcaattcttggacaaacttcctagagttttgtttgatgaggatttacaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36702407 |
atagttgtctcttgttaataatctatagcctcgtcgattggatttgaccgtgcaattcttggacaaacttcctagagttttgtttgatgaggatttacaa |
36702506 |
T |
|
| Q |
201 |
gcaagggattcactgtaagtttctttttagttatgttcat |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
36702507 |
gcaagggattcactgtaagtttctttttagttatgttcat |
36702546 |
T |
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