View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6453A_low_133 (Length: 245)
Name: NF6453A_low_133
Description: NF6453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6453A_low_133 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 48482603 - 48482373
Alignment:
| Q |
9 |
aacacagacgctaatatattgtgcagttcacaggtttgagctctggcctttcaattatgctaatcttattttccatgtgttcttttgaaaaactgttttt |
108 |
Q |
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| T |
48482603 |
aacacagacgctaatatattgcgcagttcacaggtttgagctctggtcttccaattatgctaatcttattttccatgtgttcttttgaaaaactgttttt |
48482504 |
T |
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| Q |
109 |
acattttaatttcattttagggtcccaaatccagattcagtagtggttgtgcatacccctctgggggtattctctccaagaacttcacttcaaattcaca |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
48482503 |
acattttaatttcattttagggtcccaaatccagattcagtagtggttgtgcatacccctctgggggtattctctccaagaacttcacttcaaaatcaca |
48482404 |
T |
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| Q |
209 |
agggacgctttagaggatcaaagcttatttc |
239 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
48482403 |
agggacgctttagaggatcaaagcttatttc |
48482373 |
T |
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