View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6453A_low_157 (Length: 235)

Name: NF6453A_low_157
Description: NF6453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6453A_low_157
NF6453A_low_157
[»] scaffold0634 (1 HSPs)
scaffold0634 (16-214)||(2924-3122)
[»] scaffold0026 (1 HSPs)
scaffold0026 (16-177)||(12534-12695)
[»] scaffold0456 (2 HSPs)
scaffold0456 (16-177)||(247-407)
scaffold0456 (16-177)||(7392-7552)
[»] chr2 (16 HSPs)
chr2 (24-214)||(26583046-26583236)
chr2 (16-176)||(23168954-23169114)
chr2 (16-176)||(23580211-23580371)
chr2 (64-208)||(23062983-23063127)
chr2 (47-198)||(26884489-26884639)
chr2 (64-209)||(24660876-24661021)
chr2 (146-207)||(5706698-5706759)
chr2 (137-209)||(21907750-21907822)
chr2 (113-214)||(25181507-25181606)
chr2 (137-214)||(29281368-29281445)
chr2 (64-207)||(23089636-23089779)
chr2 (141-207)||(23878325-23878391)
chr2 (137-209)||(27208322-27208394)
chr2 (137-209)||(27210657-27210729)
chr2 (72-177)||(23264419-23264524)
chr2 (146-214)||(9957-10025)
[»] chr6 (16 HSPs)
chr6 (24-214)||(29614815-29615002)
chr6 (19-208)||(25396439-25396627)
chr6 (99-212)||(12167637-12167749)
chr6 (99-212)||(19286546-19286658)
chr6 (99-212)||(19877730-19877842)
chr6 (99-212)||(19786538-19786650)
chr6 (99-212)||(19883506-19883618)
chr6 (47-198)||(19300359-19300509)
chr6 (69-207)||(18799754-18799892)
chr6 (72-209)||(19471946-19472082)
chr6 (146-207)||(34640663-34640724)
chr6 (146-207)||(34647337-34647398)
chr6 (64-207)||(21565793-21565936)
chr6 (137-212)||(25470373-25470448)
chr6 (114-177)||(9186841-9186903)
chr6 (146-214)||(20008554-20008622)
[»] chr3 (7 HSPs)
chr3 (24-212)||(41455769-41455957)
chr3 (46-177)||(13302844-13302974)
chr3 (46-209)||(13324400-13324562)
chr3 (46-177)||(13313520-13313650)
chr3 (147-207)||(24192274-24192334)
chr3 (137-207)||(55499728-55499798)
chr3 (137-207)||(16802069-16802139)
[»] chr7 (12 HSPs)
chr7 (42-214)||(13742927-13743096)
chr7 (31-214)||(13123583-13123765)
chr7 (31-214)||(12710512-12710694)
chr7 (99-212)||(13006706-13006818)
chr7 (64-208)||(46625259-46625403)
chr7 (64-207)||(16676623-16676766)
chr7 (64-207)||(17650859-17651002)
chr7 (72-208)||(13678770-13678906)
chr7 (148-207)||(12591318-12591377)
chr7 (137-209)||(14320243-14320315)
chr7 (114-207)||(11383462-11383554)
chr7 (137-214)||(16090457-16090534)
[»] scaffold0154 (1 HSPs)
scaffold0154 (59-209)||(30194-30344)
[»] scaffold0029 (1 HSPs)
scaffold0029 (31-177)||(111139-111284)
[»] scaffold1773 (1 HSPs)
scaffold1773 (38-214)||(392-567)
[»] chr8 (4 HSPs)
chr8 (31-214)||(23865818-23866001)
chr8 (64-208)||(21931018-21931162)
chr8 (72-208)||(18613529-18613664)
chr8 (113-214)||(24321277-24321376)
[»] chr4 (13 HSPs)
chr4 (38-198)||(8046516-8046676)
chr4 (58-198)||(11847397-11847537)
chr4 (46-109)||(14485975-14486037)
chr4 (64-176)||(8834185-8834297)
chr4 (147-208)||(14486052-14486113)
chr4 (146-207)||(53483022-53483083)
chr4 (116-208)||(15244566-15244658)
chr4 (113-176)||(27905613-27905675)
chr4 (64-208)||(15307415-15307563)
chr4 (137-214)||(16147437-16147514)
chr4 (66-208)||(13887086-13887228)
chr4 (66-208)||(13887943-13888085)
chr4 (163-215)||(15407485-15407537)
[»] scaffold0138 (1 HSPs)
scaffold0138 (64-208)||(1117-1261)
[»] scaffold0117 (1 HSPs)
scaffold0117 (32-214)||(9244-9425)
[»] scaffold0053 (2 HSPs)
scaffold0053 (64-208)||(81826-81970)
scaffold0053 (137-214)||(80097-80174)
[»] chr5 (8 HSPs)
chr5 (40-212)||(23527845-23528016)
chr5 (77-209)||(18408553-18408685)
chr5 (113-212)||(34829432-34829530)
chr5 (113-214)||(22460506-22460605)
chr5 (159-214)||(19236294-19236349)
chr5 (121-212)||(20781102-20781192)
chr5 (62-94)||(20819456-20819488)
chr5 (62-94)||(20826556-20826588)
[»] chr1 (9 HSPs)
chr1 (99-212)||(41111214-41111326)
chr1 (114-209)||(18712098-18712193)
chr1 (47-198)||(19961472-19961622)
chr1 (64-208)||(22030360-22030504)
chr1 (113-214)||(20851739-20851838)
chr1 (113-214)||(21705625-21705724)
chr1 (113-214)||(21710167-21710267)
chr1 (146-214)||(20858366-20858434)
chr1 (64-177)||(11157441-11157554)
[»] scaffold0004 (2 HSPs)
scaffold0004 (64-209)||(129247-129393)
scaffold0004 (72-208)||(116173-116309)
[»] scaffold0001 (2 HSPs)
scaffold0001 (47-198)||(493650-493800)
scaffold0001 (64-208)||(525062-525205)
[»] scaffold0261 (1 HSPs)
scaffold0261 (47-212)||(24178-24342)
[»] scaffold0031 (2 HSPs)
scaffold0031 (64-208)||(121200-121344)
scaffold0031 (64-208)||(132077-132221)
[»] scaffold0461 (2 HSPs)
scaffold0461 (114-209)||(658-752)
scaffold0461 (114-198)||(7605-7688)
[»] scaffold0232 (1 HSPs)
scaffold0232 (64-171)||(19059-19166)
[»] scaffold0090 (1 HSPs)
scaffold0090 (90-209)||(17492-17611)
[»] scaffold0028 (1 HSPs)
scaffold0028 (73-208)||(65413-65548)
[»] scaffold0317 (1 HSPs)
scaffold0317 (72-208)||(663-799)
[»] scaffold0222 (1 HSPs)
scaffold0222 (77-209)||(16083-16215)
[»] scaffold0085 (1 HSPs)
scaffold0085 (113-214)||(4278-4377)
[»] scaffold0025 (1 HSPs)
scaffold0025 (147-207)||(15061-15121)
[»] scaffold1061 (1 HSPs)
scaffold1061 (76-177)||(1712-1813)
[»] scaffold0476 (1 HSPs)
scaffold0476 (137-207)||(3905-3975)
[»] scaffold0094 (1 HSPs)
scaffold0094 (72-177)||(51552-51657)
[»] scaffold0034 (1 HSPs)
scaffold0034 (47-212)||(72565-72729)
[»] scaffold0483 (1 HSPs)
scaffold0483 (47-198)||(11631-11782)
[»] scaffold0124 (1 HSPs)
scaffold0124 (137-209)||(34938-35010)
[»] scaffold0247 (1 HSPs)
scaffold0247 (64-207)||(10610-10753)
[»] scaffold0453 (1 HSPs)
scaffold0453 (47-176)||(11196-11324)
[»] scaffold0720 (1 HSPs)
scaffold0720 (113-198)||(3882-3966)
[»] scaffold0206 (1 HSPs)
scaffold0206 (137-198)||(18060-18121)
[»] scaffold0235 (1 HSPs)
scaffold0235 (114-209)||(15539-15633)
[»] scaffold0169 (1 HSPs)
scaffold0169 (64-108)||(6299-6343)
[»] scaffold0139 (1 HSPs)
scaffold0139 (72-204)||(15604-15735)
[»] scaffold0335 (1 HSPs)
scaffold0335 (64-108)||(3328-3372)
[»] scaffold0310 (1 HSPs)
scaffold0310 (163-207)||(6907-6951)
[»] scaffold0023 (1 HSPs)
scaffold0023 (113-177)||(134820-134882)


Alignment Details
Target: scaffold0634 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 2924 - 3122
Alignment:
Q  16 acatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtc 115  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2924 acatcaaccaattcgatcaccggcttgttctagtgggattctggtacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtc 3023  T
Q  116 ccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||    
T  3024 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtct 3122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 177
Target Start/End: Complemental strand, 12695 - 12534
Alignment:
Q  16 acatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtc 115  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  12695 acatcaaccaattcgatcaccggcttgttctagtaggattctgatacctatacaagggatatacaagttaaaggaaatattttagaatgctcaagaagtc 12596  T
Q  116 ccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 177  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  12595 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 247 - 407
Alignment:
Q  16 acatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| || |||| |||||||||||||||||| |||    
T  247 acatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaagatgtc 346  T
Q  116 ccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 177  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  347 cccttgtgcacgaagc-aaaattcagaaagaggctgactaaggttcacttcgcttaagcgac 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 7392 - 7552
Alignment:
Q  16 acatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtc 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| || |||| |||||||||||||||||| |||    
T  7392 acatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaagatgtc 7491  T
Q  116 ccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 177  Q
    |||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  7492 cccttgtgcacgaagc-aaaattcagaaagaggctgactaaggttcacttcgcttaagcgac 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 26583046 - 26583236
Alignment:
Q  24 caattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtg 123  Q
    ||||||||||||| ||| |||||| ||||| || | |||||| || |||||||||| ||||||| |||| ||| ||||||||||||||||||||||| ||    
T  26583046 caattcgatcaccggctagttctaataggagtcggttacctacaccagggttatactagttaaaagaaatattatagaatgctcaagaagtcccctcctg 26583145  T
Q  124 cacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||||| ||||| |||| ||  |||||||||||| || |||||||||||||||| | |||||| |||||||||||||||||||| ||||||    
T  26583146 cacgaaacaaaagttcagaagaaggctgactaagacttacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtct 26583236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 23169114 - 23168954
Alignment:
Q  16 acatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaaga-agt 114  Q
    |||||||||||| ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||| | ||| |  ||    
T  23169114 acatcaaccaatgcgatcaccagagtgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggt 23169015  T
Q  115 cccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcga 176  Q
    ||||| || |||||| | ||  |||| |||||||||||||||| ||||  ||||||||||||    
T  23169014 cccctagtacacgaaac-aattttcagaaagaggctgactaagcctcagctcgcttaagcga 23168954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 23580371 - 23580211
Alignment:
Q  16 acatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaaga-agt 114  Q
    |||||||||||| ||||||||||  |||||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||| | ||| |  ||    
T  23580371 acatcaaccaatgcgatcaccagagtgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggt 23580272  T
Q  115 cccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcga 176  Q
    ||||| || |||||| | ||  |||| |||||||||||||||| ||||  ||||||||||||    
T  23580271 cccctagtacacgaaac-aattttcagaaagaggctgactaagcctcagctcgcttaagcga 23580211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 23062983 - 23063127
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    |||| |||||||||||||||| || ||||||||||  ||||||||| | | ||||||  ||||||| |||||  ||||||||| ||||||||||||   |    
T  23062983 tatataagggttatacaagttgaaagaaacatttttaaatgctcaaaaggatcccctaatgcacgaggcaaag-ttcaaaaagtggctgactaaggtcaa 23063081  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    ||||||||||||||| | | |||| |||||||||||||||||||||    
T  23063082 cttcgcttaagcgacggctggttcgcttaagcgaccggcttacaga 23063127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 198
Target Start/End: Original strand, 26884489 - 26884639
Alignment:
Q  47 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 145  Q
    ||||||||| |||| |||||||||| |||||||||| |||| ||||||||| | ||| ||||| | | |||||| |||||||||||||   |||| ||||    
T  26884489 agtaggatt-tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaagg-ttcagaaag 26884586  T
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    ||||||||||||||||| |||||||||||||  | ||| || |||||||||||    
T  26884587 aggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgacc 26884639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 24660876 - 24661021
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||| | | |||||| ||||||||||  ||||||||||||| ||||||||||| |       
T  24660876 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaag-taaaattcaaaaagtggctgactaagacctt 24660974  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    ||| ||||||||||| | | | || ||||||||||||||| ||||||    
T  24660975 ctttgcttaagcgacggctggctcgcttaagcgaccggctcacagaa 24661021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 5706759 - 5706698
Alignment:
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||| ||||||||    
T  5706759 aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacag 5706698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 21907750 - 21907822
Alignment:
Q  137 ttcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    ||||||||| |||||||||||| ||| ||||||||||||||  | |||||| ||||||||||||||||||||||    
T  21907750 ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaa 21907822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 25181606 - 25181507
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||| ||||||||||||| | |||| ||| |||||||||||  |||| |||||||||||||| | |||||  ||||||||||| |||||||| ||||    
T  25181606 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacactcagttcgcttaagcgacggctagtttgcttaagcgaccagcttacagtaggt 25181509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 29281368 - 29281445
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||| ||| |||||||||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||||    
T  29281368 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtct 29281445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 23089779 - 23089636
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| |  ||| |||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  23089779 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 23089681  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    |||||||||||||||    ||||| ||||||||||||||||||||    
T  23089680 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacag 23089636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 23878325 - 23878391
Alignment:
Q  141 aaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||| |||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||    
T  23878325 aaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacag 23878391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 27208394 - 27208322
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    |||| ||| ||||||||||||||||| |||||||||||||  | ||| || ||||||||||| ||| ||||||    
T  27208394 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacagaa 27208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 27210729 - 27210657
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    |||| ||| ||||||||||||||||| |||||||||||||  | ||| || ||||||||||| ||| ||||||    
T  27210729 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacagaa 27210657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 23264419 - 23264524
Alignment:
Q  72 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgct 169  Q
    ||||||||||||| || | ||||||| | ||||||||| | | |||||| |||||||| || ||| ||||||||| |||||||||||| ||| |||||||    
T  23264419 ggttatacaagttgaaaggaacatttaaaaatgctcaaaaggatcccctagtgcacgaggc-aaagttcaaaaagtggctgactaagg-tcatcttcgct 23264516  T
Q  170 taagcgac 177  Q
    ||||||||    
T  23264517 taagcgac 23264524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 9957 - 10025
Alignment:
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||||| ||||  |||| || ||||||||||| | |||||| ||||||||||| |||||||| ||||||    
T  9957 aggctgtctaacactcagtttgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtct 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 29615002 - 29614815
Alignment:
Q  24 caattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtg 123  Q
    |||||| |||||| ||| |||||| || ||||||| ||||||| | |||||||||| |||||||||||| ||| ||||||||||||||||| ||||| ||    
T  29615002 caattcaatcaccggctcgttctaataagattctgttacctatgccagggttatactagttaaaggaaatattatagaatgctcaagaagttccctcatg 29614903  T
Q  124 cacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||||| ||||| |||| |   |||||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||| ||||||    
T  29614902 cacgaaacaaaagttcaga---aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccgacttacagtaggtct 29614815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 25396439 - 25396627
Alignment:
Q  19 tcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tccc 117  Q
    |||||||||||||| ||||   ||||  |||||||||| | | | ||||||||||||||||||||| || ||||||||||||||||||||| | | | ||    
T  25396439 tcaaccaattcgattaccaatgtgtttcagtaggattcag-tgcatatacaagggttatacaagttgaaagaaacattttagaatgctcaaaaggattcc 25396537  T
Q  118 ctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    || |||||| |||| | ||||||||||| || |||||||| |  |||||||||||||||| | | | || |||||||||||| ||||||||    
T  25396538 ctagtgcactaagc-ataattcaaaaagtggttgactaagacctacttcgcttaagcgacggctggctcgcttaagcgaccgacttacaga 25396627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 12167637 - 12167749
Alignment:
Q  99 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  12167637 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 12167735  T
Q  199 ggcttacagaaggt 212  Q
     |||||||| ||||    
T  12167736 agcttacagtaggt 12167749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 19286546 - 19286658
Alignment:
Q  99 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  19286546 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19286644  T
Q  199 ggcttacagaaggt 212  Q
     |||||||| ||||    
T  19286645 agcttacagtaggt 19286658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 19877730 - 19877842
Alignment:
Q  99 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  19877730 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19877828  T
Q  199 ggcttacagaaggt 212  Q
     |||||||| ||||    
T  19877829 agcttacagtaggt 19877842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 19786650 - 19786538
Alignment:
Q  99 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||| ||||||||||||||||| ||||  |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  19786650 agaacgctcaagaagtcccctcatgcattaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19786552  T
Q  199 ggcttacagaaggt 212  Q
     |||||||| ||||    
T  19786551 agcttacagtaggt 19786538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 19883506 - 19883618
Alignment:
Q  99 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||| | ||||| |||||||||||||||||| | |||||| |||||||||||    
T  19883506 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctaattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19883604  T
Q  199 ggcttacagaaggt 212  Q
     |||||||| ||||    
T  19883605 agcttacagtaggt 19883618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 19300509 - 19300359
Alignment:
Q  47 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 145  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||||| || | ||| ||||| | | |||||| ||||||||||||||  |||| | ||    
T  19300509 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaacacttaaaaatactcaaaagggtcccctagtgcacgaagcaaag-ttcagatag 19300412  T
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||||||||||||||||  ||||||||||||  | ||| || |||||||||||    
T  19300411 aggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgacc 19300359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 207
Target Start/End: Original strand, 18799754 - 18799892
Alignment:
Q  69 aagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcg 167  Q
    |||||||||||||||| || | ||||| || ||||||| || | | ||||||  |||| || |||||  ||||||||| |||||||||||| | ||||||    
T  18799754 aagggttatacaagttgaaaggaacatgtttgaatgctaaaaagggtcccctaatgcatgaggcaaag-ttcaaaaagtggctgactaaggttgacttcg 18799852  T
Q  168 cttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    |||||||||| | |||||| ||||||||||||||||||||    
T  18799853 cttaagcgacggctagttcgcttaagcgaccggcttacag 18799892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 209
Target Start/End: Complemental strand, 19472082 - 19471946
Alignment:
Q  72 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgctt 170  Q
    ||||||||||||| |||||||||||| | ||||||||| | | |||||| ||||||||||| ||||||||||||| ||||||| ||| |   ||||||||    
T  19472082 ggttatacaagttgaaggaaacatttcaaaatgctcaaaaggatcccctagtgcacgaagc-aaaattcaaaaagtggctgac-aagaccttcttcgctt 19471985  T
Q  171 aagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    ||||||  | | | || ||||||||||||||| ||||||    
T  19471984 aagcgatggctggctcgcttaagcgaccggctcacagaa 19471946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 34640724 - 34640663
Alignment:
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||| ||||||||    
T  34640724 aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacag 34640663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 34647398 - 34647337
Alignment:
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||| ||||||||    
T  34647398 aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacag 34647337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 21565936 - 21565793
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| | | || |||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  21565936 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtctcctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 21565838  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    |||||||||||||||    ||||| ||||||||||||||||||||    
T  21565837 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacag 21565793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 25470448 - 25470373
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    |||| ||| ||||||||||||| ||||||||||||||||||   |||||| |||||||||||  ||||||| ||||    
T  25470448 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacgtctagttcgcttaagcgaccaacttacagtaggt 25470373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 9186841 - 9186903
Alignment:
Q  114 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgac 177  Q
    |||||| ||||||||||||||  ||||||||| |||||||||||| ||| |||||||||||||||    
T  9186841 tcccctagtgcacgaagcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgac 9186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 20008622 - 20008554
Alignment:
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||||| ||||  |||| ||||||||||| || | |||||| ||||||||||| |||||||| ||||||    
T  20008622 aggctgtctaacactcagttcgcttaagcaacggctagttcgcttaagcgaccagcttacagtaggtct 20008554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 41455957 - 41455769
Alignment:
Q  24 caattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtg 123  Q
    |||||||||  |||||||||||||||||||||||||||||||||| ||| |||||||||||||||   |  ||  |||| ||||| ||||||||||| ||    
T  41455957 caattcgattgccagcttgttctagtaggattctgatacctatactaggattatacaagttaaagaggaagttaaagaacgctcaggaagtcccctcatg 41455858  T
Q  124 cacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||| |||||| | |||| ||| ||||||||||||| |||||||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  41455857 cactaagcaacagttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 41455769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 13302974 - 13302844
Alignment:
Q  46 tagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaa 144  Q
    |||||||||| || ||||||||||||||||||| ||| | || ||||||| || |||||||||| | | ||||||  |||||||||||||| |||| |||    
T  13302974 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13302877  T
Q  145 gaggctgactaaggctcacttcgcttaagcgac 177  Q
    | ||||||||||||||||  |||||||||||||    
T  13302876 gtggctgactaaggctcagctcgcttaagcgac 13302844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 13324562 - 13324400
Alignment:
Q  46 tagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaa 144  Q
    |||||||||| || ||||||||||||||||||| ||| | || ||||||| || |||||||||| | | ||||||  |||||||||||||| |||| |||    
T  13324562 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13324465  T
Q  145 gaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    | ||||||||||||||||  ||||||||||||  | | | || |||||||||| ||||| |||||    
T  13324464 gtggctgactaaggctcagctcgcttaagcgaaggctggctcgcttaagcgactggcttgcagaa 13324400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 13313650 - 13313520
Alignment:
Q  46 tagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaa 144  Q
    |||||||||| || ||||||||||||||||||| ||| | || ||||||| ||  ||||||||| | | ||||||  |||||||||||||| |||| |||    
T  13313650 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttaaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13313553  T
Q  145 gaggctgactaaggctcacttcgcttaagcgac 177  Q
    | ||||||||||||||||  |||||||||||||    
T  13313552 gtggctgactaaggctcagctcgcttaagcgac 13313520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 24192274 - 24192334
Alignment:
Q  147 ggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||||  ||||||||||||||||| | |||||| ||||||||||||||||||||    
T  24192274 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacag 24192334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 55499798 - 55499728
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||| |||||||||||    ||||||||||||||||   |||||| ||||||||||||||||||||    
T  55499798 ttcaaaaagtggctgactaagatcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacag 55499728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 16802139 - 16802069
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||| |||| |||||||   ||||||||||| |||| | ||| || ||||||||||||||||||||    
T  16802139 ttcaaaaagtggctaactaaggtcaacttcgcttaaacgacggctagctcgcttaagcgaccggcttacag 16802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 13742927 - 13743096
Alignment:
Q  42 gttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaa 141  Q
    |||||| |||||||| | |||||| || |||||||||| ||||||| |||| ||| ||||||||||||||||||||||| |||||||| ||||| ||||     
T  13742927 gttctaataggattcggttacctacaccagggttatactagttaaaagaaatattatagaatgctcaagaagtcccctcatgcacgaaacaaaagttcag 13743026  T
Q  142 aaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |   |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| || ||||||    
T  13743027 a---aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccggcttatagtaggtct 13743096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 214
Target Start/End: Complemental strand, 13123765 - 13123583
Alignment:
Q  31 atcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaag 130  Q
    |||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| |||    
T  13123765 atcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaag 13123666  T
Q  131 caaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
     || | |||| ||| |||||||||||| ||||||||||||||||||| | ||| || |||||||||||  ||||||| ||||||    
T  13123665 taatagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtct 13123583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 214
Target Start/End: Complemental strand, 12710694 - 12710512
Alignment:
Q  31 atcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaag 130  Q
    |||||| ||||||| || |||| ||||  |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| |||    
T  12710694 atcaccggcttgttataataggcttcttctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaag 12710595  T
Q  131 caaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
     || | |||| ||| |||||||||||| ||||||||||||||||||| | ||| || |||||||||||  ||||||| ||||||    
T  12710594 taatagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtct 12710512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 13006706 - 13006818
Alignment:
Q  99 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  13006706 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 13006804  T
Q  199 ggcttacagaaggt 212  Q
     |||||||| ||||    
T  13006805 agcttacagtaggt 13006818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 46625259 - 46625403
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||| ||||| ||||||||| || ||||||||||| ||||||||| | | | |||| ||||||||| ||||| |||||| || ||||||||||| |  |    
T  46625259 tataccagggtcatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaaacaaaa-ttcaaagagtggctgactaagaccta 46625357  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    ||||||||||||||| | | | || ||||||||||| |||||||||    
T  46625358 cttcgcttaagcgacggctggctcgcttaagcgacctgcttacaga 46625403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 16676623 - 16676766
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| | | ||||||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  16676623 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 16676721  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    |||||||||||||||   |||||| ||||||||||||||||||||    
T  16676722 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacag 16676766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 17650859 - 17651002
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    |||| |||||||||||||||| |||||| ||| ||  ||||||||| | | ||||||  ||||||| ||||   ||||||||| ||||||||||||   |    
T  17650859 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaacg-ttcaaaaagtggctgactaaggtcaa 17650957  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    |||||||||||||||   |||||| ||||||||||||||||||||    
T  17650958 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacag 17651002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 13678770 - 13678906
Alignment:
Q  72 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgct 169  Q
    |||||||||| || || ||||||||||  ||||||||| | | ||||||  ||||||| |||||  ||||||||| |||||||||||| ||| |||||||    
T  13678770 ggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaag-ttcaaaaagtggctgactaagg-tcatcttcgct 13678867  T
Q  170 taagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    |||||||| | | |||| |||||||||||||||||||||    
T  13678868 taagcgacggctggttcgcttaagcgaccggcttacaga 13678906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 12591377 - 12591318
Alignment:
Q  148 gctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||| |||||||||||||||||| | |||||| ||||||||||| ||||||||    
T  12591377 gctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacag 12591318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 14320315 - 14320243
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    |||| ||| ||||||||||||||||| |||||||||||||  | ||| || ||||||||||||||| ||||||    
T  14320315 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccggctcacagaa 14320243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 11383554 - 11383462
Alignment:
Q  114 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||||| | ||| || |||||||||| |||| ||||    
T  11383554 tcccctagtgcacgaggcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgacaggctcacag 11383462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 16090457 - 16090534
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||| ||| |||||||||||  |||| |||||||||||||| | ||| || |||||||||||  ||||||| ||||||    
T  16090457 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtct 16090534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 30194 - 30344
Alignment:
Q  59 atacctatacaagggttatacaagttaaaggaaacattttagaatgctcaaga-agtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaag 157  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| |  ||||||| ||||||||||| |||||||| |||| |||||||||||    
T  30194 atacctatacaagggttatacaagttgaaagaaacattttagaatgctcaaaagggtcccctagtgcacgaagc-aaaattcagaaagtggctgactaag 30292  T
Q  158 gctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    |||||||||||||||||||  | | | || ||||||||||||||||||||||    
T  30293 gctcacttcgcttaagcgaaggttggctcgcttaagcgaccggcttacagaa 30344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 111139 - 111284
Alignment:
Q  31 atcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaag 130  Q
    |||||| |||||||||| |||||||| | |||||| || |||||||||| |||||||||| | ||| ||||||||||||||||||||||| ||||| |||    
T  111139 atcaccggcttgttctaataggattcagttacctacaccagggttatactagttaaaggagaaattatagaatgctcaagaagtcccctcatgcactaag 111238  T
Q  131 caaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 177  Q
     || | |||| ||| |||||||||||| |||||||||||||||||||    
T  111239 taatagttcagaaa-aggctgactaagactcacttcgcttaagcgac 111284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 214
Target Start/End: Original strand, 392 - 567
Alignment:
Q  38 gcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaaaat 137  Q
    |||||||||| |||||||| | |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| || | |    
T  392 gcttgttctaataggattcggttacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagt 491  T
Q  138 tcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    ||| ||| |||||||||||| ||||||||||||||||||| | |||||| ||||||||||| |||||||| ||||||    
T  492 tcagaaa-aggctgactaagactcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtct 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 214
Target Start/End: Original strand, 23865818 - 23866001
Alignment:
Q  31 atcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaag 130  Q
    |||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| |||    
T  23865818 atcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaag 23865917  T
Q  131 caaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
     || | |||| ||| |||||||||||| ||||||||||||||||||| | ||| || |||||||||||  ||||||| ||||||    
T  23865918 taatagttcagaaaaaggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtct 23866001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 21931018 - 21931162
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag--tcccctcgtgcacgaagcaaaaattcaaaaagaggctga-ctaaggct 160  Q
    ||||||| ||||||||||||| || ||||||||||||||||||| ||| |  | |||| ||| | |||||||||  |||||||| |||||| | |||||     
T  21931018 tatacaaaggttatacaagttgaaagaaacattttagaatgctc-agatggattccctagtggaggaagcaaaa--tcaaaaagtggctgaccaaaggcc 21931114  T
Q  161 cacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
      ||||||||||||||  | | ||||||||||||||||| ||||||||    
T  21931115 ttcttcgcttaagcgaaggctggttcacttaagcgaccgacttacaga 21931162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 18613529 - 18613664
Alignment:
Q  72 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgct 169  Q
    ||||||||||||| || | ||||||||  ||||||||||| | |||||| |||||||| |||||  ||||||| | ||| |||||||| ||| |||||||    
T  18613529 ggttatacaagttgaaaggaacatttttaaatgctcaagaggatcccctagtgcacgaggcaaag-ttcaaaa-gtggccgactaagg-tcatcttcgct 18613625  T
Q  170 taagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    |||||||| | | |||| ||||||||||| |||||||||    
T  18613626 taagcgacggctggttcgcttaagcgacctgcttacaga 18613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 24321376 - 24321277
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  24321376 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 24321279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 8046676 - 8046516
Alignment:
Q  38 gcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaaaat 137  Q
    |||||||||| |||||||| | |||||| || |||||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| || | |    
T  8046676 gcttgttctaataggattcggttacctacaccagggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaacagt 8046577  T
Q  138 tcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    ||| ||| ||||||||||||||||||||||||||||||||   ||| || |||||||||||    
T  8046576 tcagaaaaaggctgactaaggctcacttcgcttaagcgacgtctagctcgcttaagcgacc 8046516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 198
Target Start/End: Original strand, 11847397 - 11847537
Alignment:
Q  58 gatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaa 156  Q
    |||||||||||||| |||||||||| || | |||||| ||   ||| ||||| | | |||||| |||||| |||||||  |||| |||||||||||||||    
T  11847397 gatacctatacaagagttatacaagctagaagaaacacttacaaatactcaaaagggtcccctagtgcacaaagcaaag-ttcagaaagaggctgactaa 11847495  T
Q  157 ggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    ||||||  ||||||||||||| | |||||| |||||||||||    
T  11847496 ggctcagctcgcttaagcgacgggtagttcgcttaagcgacc 11847537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 14485975 - 14486037
Alignment:
Q  46 tagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaa 109  Q
    |||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||    
T  14485975 tagtaggatt-tgatacctatacaagggttatacaagctgaaagaaacattttagaatgctcaa 14486037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 8834185 - 8834297
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||||| ||||||||||||| || |||||||||||||| |||||| | | | | || ||||| |||||||||| |||||||| ||||||||||| |       
T  8834185 tatacaaaggttatacaagttgaaagaaacattttagaacgctcaaaaggattctctagtgcatgaagcaaaaa-tcaaaaagtggctgactaagacctt 8834283  T
Q  163 cttcgcttaagcga 176  Q
    ||||||||||||||    
T  8834284 cttcgcttaagcga 8834297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 14486052 - 14486113
Alignment:
Q  147 ggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    ||||||||||||||||||||||||||||||  | | | || |||||||||||||||||||||    
T  14486052 ggctgactaaggctcacttcgcttaagcgaaggctggctcgcttaagcgaccggcttacaga 14486113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 53483022 - 53483083
Alignment:
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||||| |||||||||||||||||| |  ||||| ||||||||||| ||||||||    
T  53483022 aggctgactaaggttcacttcgcttaagcgacggcaagttcgcttaagcgaccagcttacag 53483083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 15244566 - 15244658
Alignment:
Q  116 ccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    |||| ||||||||||||||| ||||||||| ||||||||||| |   ||||| ||||||||| | |   || |||||||||||||||||||||    
T  15244566 ccctagtgcacgaagcaaaatttcaaaaagtggctgactaagaccttcttcgattaagcgacggttgactcgcttaagcgaccggcttacaga 15244658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 176
Target Start/End: Original strand, 27905613 - 27905675
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcga 176  Q
    |||||||  ||||||||||||||||||| |||| |||||||| |||||||  ||||||||||||    
T  27905613 gtcccctaatgcacgaagcaaaaattcagaaagtggctgact-aggctcagctcgcttaagcga 27905675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 15307415 - 15307563
Alignment:
Q  64 tatacaagggttatacaagtt---aaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggc 159  Q
    ||||||| |||||||||||||   |||  |||||||||| ||||||| | | | | |||| ||||||||||||||  ||| ||||| ||||||||||| |    
T  15307415 tatacaaaggttatacaagttgaaaaaaaaaacattttaaaatgctcgaaaggattccctagtgcacgaagcaaagtttcgaaaagtggctgactaagac 15307514  T
Q  160 tcacttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
       ||||||||||||||  | | | || |||||||||||| ||||||||    
T  15307515 cttcttcgcttaagcgatggctggctcgcttaagcgaccgacttacaga 15307563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 16147514 - 16147437
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||| ||| |||||||||||  |||| |||||||||||||| | ||| || |||||||||||  ||||||| ||||||    
T  16147514 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtct 16147437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 208
Target Start/End: Original strand, 13887086 - 13887228
Alignment:
Q  66 tacaagggttatacaagttaaaggaaacatttt-agaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcac 163  Q
    ||||| ||||||||||||| || |||||||||| | |||| |||| | | | |||| ||||||||||||||| ||||||| | |||| |||||| |   |    
T  13887086 tacaaaggttatacaagttgaaagaaacatttttaaaatgttcaaaaggattccctagtgcacgaagcaaaa-ttcaaaa-gtggctaactaagaccttc 13887183  T
Q  164 ttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    |||||||||||||| | | | || ||||| |||||||||||||||    
T  13887184 ttcgcttaagcgacggctggctcgcttaaacgaccggcttacaga 13887228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 208
Target Start/End: Original strand, 13887943 - 13888085
Alignment:
Q  66 tacaagggttatacaagttaaaggaaacatttt-agaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcac 163  Q
    ||||| ||||||||||||| || |||||||||| | |||| |||| | | | |||| ||||||||||||||| ||||||| | |||| |||||| |   |    
T  13887943 tacaaaggttatacaagttgaaagaaacatttttaaaatgttcaaaaggattccctagtgcacgaagcaaaa-ttcaaaa-gtggctaactaagaccttc 13888040  T
Q  164 ttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    |||||||||||||| | | | || ||||| |||||||||||||||    
T  13888041 ttcgcttaagcgacggctggctcgcttaaacgaccggcttacaga 13888085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 15407485 - 15407537
Alignment:
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtcta 215  Q
    ||||||||||||||| |  ||||| ||||||||||||||| |||||| |||||    
T  15407485 cttcgcttaagcgacggccagttcgcttaagcgaccggctcacagaaagtcta 15407537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 1117 - 1261
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||| | | |||||| ||||||||||||||| ||||||||| ||||||||||| | |     
T  1117 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagaccct 1215  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    ||||||||||||||| | | | || ||||||||||||||| |||||    
T  1216 cttcgcttaagcgacggctggctcgcttaagcgaccggctcacaga 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 214
Target Start/End: Complemental strand, 9425 - 9244
Alignment:
Q  32 tcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagc 131  Q
    ||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  ||  |||||||||||||||||||||| ||||| |||     
T  9425 tcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttacagaatgctcaagaagtcccctcatgcactaagt 9326  T
Q  132 aaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||| || | ||| |||||||||||| ||||||||||||||||||| | ||| || |||||||||||  ||||||| ||||||    
T  9325 aaaagtttagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtct 9244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 81970 - 81826
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||| | | | |||| ||| ||||||||||| ||||||||| ||||||||||| |  |    
T  81970 tatacaagggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctggtgtacgaagcaaaa-ttcaaaaagtggctgactaagaccta 81872  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    ||||||||||||||| | | | || |||||||||||| ||||||||    
T  81871 cttcgcttaagcgacggctggctcgcttaagcgaccgacttacaga 81826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 80174 - 80097
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||| ||| |||||||||||  |||| |||||||||||||| | ||| || |||||||||||  ||||||| ||||||    
T  80174 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtct 80097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 212
Target Start/End: Original strand, 23527845 - 23528016
Alignment:
Q  40 ttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaagtcccctcgtgcacgaagcaaaaattc 139  Q
    |||||||| |||||||  | |||||| || |||||||||| ||||||||   |  ||  |||| ||||||||||||||||| ||||| |||||| | |||    
T  23527845 ttgttctaataggatttggttacctacaccagggttatactagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaagcaacagttc 23527944  T
Q  140 aaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    | ||| ||||||| ||||| |||||||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  23527945 agaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 23528016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 209
Target Start/End: Complemental strand, 18408685 - 18408553
Alignment:
Q  77 tacaagttaaaggaaacattttagaatgctcaaga-agtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcactt-cgcttaagc 174  Q
    |||||||| || | ||||||| | ||||||||| | | |||||| |||||||| |||||  ||||||||| |||||||||||| ||| || |||||||||    
T  18408685 tacaagttgaaaggaacatttaaaaatgctcaaaagaatcccctagtgcacgaggcaaag-ttcaaaaagtggctgactaagg-tcattttcgcttaagc 18408588  T
Q  175 gacagatagttcacttaagcgaccggcttacagaa 209  Q
    ||| | |||||  ||||||||||||||||||||||    
T  18408587 gacggctagtttgcttaagcgaccggcttacagaa 18408553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 34829432 - 34829530
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||| ||||||||||||||  |||| ||| ||| ||||||||||||| |||||||||||||  | ||| || ||||||||||| ||| ||| |||||    
T  34829432 gtcccctagtgcacgaagcaaag-ttcagaaaaaggttgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 34829530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 22460506 - 22460605
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  22460506 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 22460603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 19236294 - 19236349
Alignment:
Q  159 ctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||||    
T  19236294 ctcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtct 19236349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 20781102 - 20781192
Alignment:
Q  121 gtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||||||||||| |||| ||| |||||||||||  || | |||||||||||||| | ||| || ||||||||||| ||| ||| |||||    
T  20781102 gtgcacgaagcaaaa-ttcagaaaaaggctgactaacacttagttcgcttaagcgacgggtagctcgcttaagcgaccagctcacacaaggt 20781192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 20819456 - 20819488
Alignment:
Q  62 cctatacaagggttatacaagttaaaggaaaca 94  Q
    ||||||||||||||||||||| |||||||||||    
T  20819456 cctatacaagggttatacaagctaaaggaaaca 20819488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 20826556 - 20826588
Alignment:
Q  62 cctatacaagggttatacaagttaaaggaaaca 94  Q
    ||||||||||||||||||||| |||||||||||    
T  20826556 cctatacaagggttatacaagctaaaggaaaca 20826588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 41111214 - 41111326
Alignment:
Q  99 agaatgctcaagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||| ||||||||||||||||| ||||| |||||| | |||| ||| ||||||| ||||| |||||||||||||||||| | |||||| |||||||||||    
T  41111214 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 41111312  T
Q  199 ggcttacagaaggt 212  Q
     |||||||| ||||    
T  41111313 agcttacagtaggt 41111326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 18712098 - 18712193
Alignment:
Q  114 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    |||||| |||||||| |||||| ||||||| | |||||||||||| ||| ||||||||||||||| | |||||| ||||||||||| ||||||||||    
T  18712098 tcccctagtgcacgaggcaaaagttcaaaaggtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccagcttacagaa 18712193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 198
Target Start/End: Original strand, 19961472 - 19961622
Alignment:
Q  47 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 145  Q
    ||||||||| |||| ||||||||||||||||||||| |||| ||||||  | | ||| ||||| | | |||||| ||||||||||||||  |||| | ||    
T  19961472 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaacacgtaaaaatactcaaaagggtcccctagtgcacgaagcaaag-ttcagatag 19961569  T
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||||||||||||||||  ||||||||||||  | ||| || |||||||||||    
T  19961570 aggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgacc 19961622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 22030504 - 22030360
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||||| ||||||||||||| || |||||||| |||||||||||| | | |  ||| ||||| |||||||||||| |||||| ||||||||||| |       
T  22030504 tatacaaaggttatacaagttgaaagaaacattatagaatgctcaaaaggatttcctagtgcaagaagcaaaaatt-aaaaagtggctgactaagacctt 22030406  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    ||||||||||||||  | | | || |||||||||| ||||||||||    
T  22030405 cttcgcttaagcgaaggctggctcgcttaagcgactggcttacaga 22030360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 20851838 - 20851739
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  20851838 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 20851741  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 21705625 - 21705724
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||| ||| ||||||||| | |||| ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  21705625 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21705722  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 21710167 - 21710267
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||| ||| ||||||||| | |||  ||| |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||    
T  21710167 gtcccctagtgtacgaagcaaga-ttcggaaaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21710265  T
Q  213 ct 214  Q
    ||    
T  21710266 ct 21710267  T

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Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 20858434 - 20858366
Alignment:
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggtct 214  Q
    |||||| ||||  |||| |||||||||||||| | |||||| ||||||||||| |||||||| ||||||    
T  20858434 aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtct 20858366  T

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Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 11157441 - 11157554
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    |||| |||||||||||||||| || ||||||||||  ||||||||| | | ||||||  ||||||| || ||| ||||||||| || ||||||||| |||    
T  11157441 tatataagggttatacaagttgaaagaaacatttttaaatgctcaaaaggatcccctaatgcacgaggc-aaagttcaaaaagtggttgactaagg-tca 11157538  T
Q  163 -cttcgcttaagcgac 177  Q
     |||||||||||||||    
T  11157539 tcttcgcttaagcgac 11157554  T

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Target: scaffold0004 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 209
Target Start/End: Complemental strand, 129393 - 129247
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctc 161  Q
    ||||||| ||||||||||||| |||||||||||| | || ||||||| | | |||||| ||||||||||||||| ||||||||| ||||||||||| |      
T  129393 tatacaaaggttatacaagttgaaggaaacatttcaaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagacct 129295  T
Q  162 acttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
     ||||||||||||||| | | | || ||||||||||||||| ||||||    
T  129294 tcttcgcttaagcgacggctggctcgcttaagcgaccggctcacagaa 129247  T

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Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 116173 - 116309
Alignment:
Q  72 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgct 169  Q
    ||||||||| ||| || ||||||||||| ||| ||||| | | |||||| |||||||| |||||  ||||||||  |||||||||||| ||| |||||||    
T  116173 ggttatacaggttgaaagaaacattttaaaatactcaaaaggatcccctagtgcacgaggcaaag-ttcaaaaaatggctgactaagg-tcatcttcgct 116270  T
Q  170 taagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    |||||||| | | |||| |||||||||||||||||||||    
T  116271 taagcgacggctggttcgcttaagcgaccggcttacaga 116309  T

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Target: scaffold0001 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 493800 - 493650
Alignment:
Q  47 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 145  Q
    ||||||||| |||| |||||||||| |||||||||| |||| ||||||||| | ||| ||||| | | |||||| |||||||||||||   |||| |||     
T  493800 agtaggatt-tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaagg-ttcagaaaa 493703  T
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    ||||||||||||||||| |||||||||||||  | ||| || |||||||||||    
T  493702 aggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgacc 493650  T

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Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 525062 - 525205
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag--tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctc 161  Q
    ||||||| ||||||||||||| || ||||||||| ||||||||| ||| |  | |||| ||||| ||| |||||  |||||| | ||||||| |||||      
T  525062 tatacaaaggttatacaagttgaaagaaacatttcagaatgctc-agatggattccctagtgcaggaaacaaaa--tcaaaatgtggctgaccaaggcct 525158  T
Q  162 acttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
     ||||||||||||||  | | |||| |||||||||||| ||||||||    
T  525159 tcttcgcttaagcgaaggctggttcgcttaagcgaccgtcttacaga 525205  T

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Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 212
Target Start/End: Complemental strand, 24342 - 24178
Alignment:
Q  47 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 145  Q
    ||||||||| |||| |||| |||||||||||||||| |||| |||||| || | ||  ||||| | | |||||| ||||||||||||||  |||| ||||    
T  24342 agtaggatt-tgatgcctacacaagggttatacaagctaaaagaaacacttaaaaacactcaaaagggtcccctagtgcacgaagcaaag-ttcagaaag 24245  T
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    || ||||||||||||||  ||||||||||||  ||||| || ||||||||||| ||| ||| |||||    
T  24244 agactgactaaggctcatctcgcttaagcgaaggatagctcgcttaagcgaccagctcacaaaaggt 24178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 121200 - 121344
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||| | | | |||| ||||||||||| |||| |||||||| ||||||||||| |       
T  121200 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagc-aaaagtcaaaaagtggctgactaagacctt 121298  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    ||||||||||||||  | | | || ||||||| |||||||||||||    
T  121299 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacaga 121344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 132077 - 132221
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||||| ||||||||||||| || ||||||||||| ||||||||| | | | |||| ||||||||||| |||| |||||||| ||||||||||| |       
T  132077 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagc-aaaagtcaaaaagtggctgactaagacctt 132175  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    ||||||||||||||  | | | || ||||||| |||||||||||||    
T  132176 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacaga 132221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 752 - 658
Alignment:
Q  114 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  752 tcccctagtgcacgacgcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagaa 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 7688 - 7605
Alignment:
Q  114 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||||| | |||||| |||||||||||    
T  7688 tcccctagtgcacgacgcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgacc 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 19166 - 19059
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    ||||||| ||||||| ||||| || ||||||||||| ||||||||| | | |||||| ||||||||||| ||||||||||||| ||||||||||| | |     
T  19166 tatacaaaggttatataagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagc-aaaattcaaaaagtggctgactaagaccct 19068  T
Q  163 cttcgctta 171  Q
    |||||||||    
T  19067 cttcgctta 19059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 17492 - 17611
Alignment:
Q  90 aaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcac 188  Q
    |||| ||||||||||||||| | | || ||| ||||||||| ||||| |||| |||| ||||||| ||||||||||||||||||||||  | | | || |    
T  17492 aaaccttttagaatgctcaaaaggctcgcctagtgcacgaaacaaaa-ttcagaaagtggctgaccaaggctcacttcgcttaagcgaaggctggctcgc 17590  T
Q  189 ttaagcgaccggcttacagaa 209  Q
    |||||||||||||||||||||    
T  17591 ttaagcgaccggcttacagaa 17611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 65413 - 65548
Alignment:
Q  73 gttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgctta 171  Q
    |||||||||||| || ||||||||||| |||| |||| | | |||||| |||||||| |||||| ||||||||| ||||||||||||    || ||||||    
T  65413 gttatacaagttgaaagaaacattttaaaatgttcaaaaggatcccctagtgcacgaggcaaaa-ttcaaaaagtggctgactaaggtcttctccgctta 65511  T
Q  172 agcgacagatagttcacttaagcgaccggcttacaga 208  Q
    || ||| | | |||| |||||||||||||||||||||    
T  65512 agtgacggctggttcgcttaagcgaccggcttacaga 65548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 663 - 799
Alignment:
Q  72 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgct 169  Q
    |||||||||| || || ||||||||||  ||||||||| | | ||||||  ||||||| |||||  ||||||||| |||||||||||| ||| |||||||    
T  663 ggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaag-ttcaaaaagtggctgactaagg-tcatcttcgct 760  T
Q  170 taagcgacagatagttcacttaagcgaccggcttacaga 208  Q
    |||||||| | | |||| |||||||||||||||||||||    
T  761 taagcgacggctggttcgcttaagcgaccggcttacaga 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 209
Target Start/End: Original strand, 16083 - 16215
Alignment:
Q  77 tacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagc 174  Q
    |||||||| || | ||||||| | ||||||||| | | |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||    
T  16083 tacaagttgaaaggaacatttaaaaatgctcaaaaggatcccctagtgcacgaggcaaag-ttcaaaaagtggctgactaagg-tcatcttcgcttaagc 16180  T
Q  175 gacagatagttcacttaagcgaccggcttacagaa 209  Q
    ||| | ||| || ||||||||||||||||||||||    
T  16181 gacggttagctcgcttaagcgaccggcttacagaa 16215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 4377 - 4278
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
    ||||||| ||||||||||||| | |||| ||| ||||||||||| ||||| |||||||||||||  | |||||| ||||||||||| |||||||| ||||    
T  4377 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgatggctagttcgcttaagcgaccagcttacagtaggt 4280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 15121 - 15061
Alignment:
Q  147 ggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||||  ||||||||||||||||| | |||||| ||||||||||||||||||||    
T  15121 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacag 15061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 1712 - 1813
Alignment:
Q  76 atacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaag 173  Q
    ||||||||| || ||||||||||| ||||||||| | | |||||| |||||||| || ||||||||||||| |||||||||||| ||| |||||||||||    
T  1712 atacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaggc-aaaattcaaaaagtggctgactaagg-tcatcttcgcttaag 1809  T
Q  174 cgac 177  Q
    ||||    
T  1810 cgac 1813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 3975 - 3905
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||| ||||||||||||   ||||||||||||||||   |||||| ||||||||||||||||||||    
T  3975 ttcaaaaagtggctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacag 3905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 51552 - 51657
Alignment:
Q  72 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgctt 170  Q
    ||||||||||||| || ||||||||||| ||||||||| | | | |||| |||||| |||| ||||||||||||| ||||||||||| |   ||||||||    
T  51552 ggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacaaagc-aaaattcaaaaagtggctgactaagaccttcttcgctt 51650  T
Q  171 aagcgac 177  Q
    |||||||    
T  51651 aagcgac 51657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 72565 - 72729
Alignment:
Q  47 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 145  Q
    ||||||||| |||||| ||||||||||||||| ||| |||| | |||| ||||  || || || | | ||||||  ||||||||||||||||||| ||||    
T  72565 agtaggatt-tgatacttatacaagggttatataagctaaaaggaacactttaagatactaaaaagggtcccctaatgcacgaagcaaaaattcagaaag 72663  T
Q  146 aggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgaccggcttacagaaggt 212  Q
     |||||||| |||||||  ||||||||||||  | ||| || ||||||||||| ||| ||| |||||    
T  72664 tggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 72729  T

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Target: scaffold0483 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 11782 - 11631
Alignment:
Q  47 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaa 144  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||| | || | || | ||||| | | |||||| ||||| ||||||||  |||| | |    
T  11782 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaaaacttaaaaaatactcaaaagggtcccctagtgcatgaagcaaag-ttcagata 11685  T
Q  145 gaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    ||||||||||||||||||  ||||||||||||  | |||||| |||||||||||    
T  11684 gaggctgactaaggctcagctcgcttaagcgaagggtagttcgcttaagcgacc 11631  T

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Target: scaffold0124 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 35010 - 34938
Alignment:
Q  137 ttcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    ||||||||| |||||||||||| ||| ||||||||||||||  | |||||| ||||||||||||||||||||||    
T  35010 ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaa 34938  T

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Target: scaffold0247 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 10610 - 10753
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgct-caagaagtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca 162  Q
    |||| ||||||||||||||||||| |  |||| ||  |||||| ||||   ||||||  ||||||| |||||  ||||||||| |||||||||||    |    
T  10610 tatataagggttatacaagttaaaagggacatgtttaaatgctacaagggatcccctaatgcacgaggcaaag-ttcaaaaagtggctgactaagatcaa 10708  T
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||||||| | ||| || ||||||||||||||||||||    
T  10709 cttcgcttaagcgacggctagctcgcttaagcgaccggcttacag 10753  T

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Target: scaffold0453 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 11324 - 11196
Alignment:
Q  47 agtaggattctgatacctatacaagggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaag 145  Q
    ||||||||| |||| |||||||||| |||||||||| ||||  ||||| || | | | ||||| | | |||||| |||||||||||||   |||| |||     
T  11324 agtaggatt-tgatgcctatacaagagttatacaagctaaaataaacacttaaaagtactcaaaagggtcccctagtgcacgaagcaagg-ttcagaaaa 11227  T
Q  146 aggctgactaaggctcacttcgcttaagcga 176  Q
    ||||||||||||||||| |||||||||||||    
T  11226 aggctgactaaggctcagttcgcttaagcga 11196  T

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Target: scaffold0720 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 3966 - 3882
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    ||||||| |||||||||||||   |||||||| ||||||||||| ||||| |||||||||||||  | ||| || |||||||||||    
T  3966 gtcccctagtgcacgaagcaagg-ttcaaaaaaaggctgactaatgctcagttcgcttaagcgaagggtagctcgcttaagcgacc 3882  T

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Target: scaffold0206 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 18060 - 18121
Alignment:
Q  137 ttcaaaaagaggctgactaaggctcacttcgcttaagcgacagatagttcacttaagcgacc 198  Q
    |||| ||| ||||||||||||||||| ||||||||||||| || ||| || |||||||||||    
T  18060 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaaaggtagctcgcttaagcgacc 18121  T

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Target: scaffold0235 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 15633 - 15539
Alignment:
Q  114 tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgcttaagcgacagatagttcacttaagcgaccggcttacagaa 209  Q
    |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||||||||||||  | ||| ||||||||||||| |||| ||||||    
T  15633 tcccctagtgcacgaggcaaat-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagctcacttaagcgactggctcacagaa 15539  T

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Target: scaffold0169 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 6299 - 6343
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctca 108  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||    
T  6299 tatacaaaggttatacaagttgaaagaaacattttagaatgctca 6343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 15735 - 15604
Alignment:
Q  72 ggttatacaagttaaaggaaacattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctca-cttcgct 169  Q
    ||||||||||||| || ||||||||||  ||||||||| | | || ||| |||||||| || ||| ||| ||||| |||||||||||| ||| |||||||    
T  15735 ggttatacaagttgaaagaaacatttttaaatgctcaaaaggatctcctagtgcacgaggc-aaagttc-aaaagtggctgactaagg-tcatcttcgct 15639  T
Q  170 taagcgacagatagttcacttaagcgaccggctta 204  Q
    |||||||| | | |||| |||||||||||| ||||    
T  15638 taagcgacggttggttcgcttaagcgaccgtctta 15604  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 3372 - 3328
Alignment:
Q  64 tatacaagggttatacaagttaaaggaaacattttagaatgctca 108  Q
    ||||||| ||||||||||||| || ||||||||| ||||||||||    
T  3372 tatacaaaggttatacaagttgaaagaaacatttcagaatgctca 3328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 6907 - 6951
Alignment:
Q  163 cttcgcttaagcgacagatagttcacttaagcgaccggcttacag 207  Q
    ||||||||||||||| | ||| || ||||||||||||||||||||    
T  6907 cttcgcttaagcgacggctagctcgcttaagcgaccggcttacag 6951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 134820 - 134882
Alignment:
Q  113 gtcccctcgtgcacgaagcaaaaattcaaaaagaggctgactaaggctcacttcgcttaagcgac 177  Q
    ||||||| ||||||||||||| | |||| ||| ||||||||||| ||||| ||||||||||||||    
T  134820 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgac 134882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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