View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6453A_low_217 (Length: 212)

Name: NF6453A_low_217
Description: NF6453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6453A_low_217
NF6453A_low_217
[»] chr2 (48 HSPs)
chr2 (5-212)||(35449373-35449581)
chr2 (28-97)||(21782832-21782901)
chr2 (20-93)||(37411250-37411323)
chr2 (22-97)||(21616738-21616813)
chr2 (19-97)||(18276497-18276575)
chr2 (19-117)||(30404855-30404953)
chr2 (19-86)||(23718013-23718080)
chr2 (19-86)||(24105685-24105752)
chr2 (19-100)||(18420439-18420520)
chr2 (19-86)||(896198-896265)
chr2 (19-73)||(44860320-44860374)
chr2 (21-86)||(31808064-31808129)
chr2 (28-117)||(36409641-36409730)
chr2 (24-76)||(28677906-28677958)
chr2 (19-86)||(31284035-31284103)
chr2 (19-66)||(5367199-5367246)
chr2 (19-86)||(20242732-20242799)
chr2 (19-86)||(30527600-30527667)
chr2 (28-97)||(4332902-4332971)
chr2 (19-116)||(18841018-18841115)
chr2 (19-67)||(18889596-18889644)
chr2 (49-97)||(29663985-29664033)
chr2 (19-67)||(34691810-34691858)
chr2 (19-67)||(34714222-34714270)
chr2 (19-95)||(36756349-36756425)
chr2 (19-83)||(39279665-39279729)
chr2 (19-75)||(42832281-42832337)
chr2 (50-116)||(12224177-12224244)
chr2 (23-86)||(15909641-15909704)
chr2 (57-100)||(21624239-21624282)
chr2 (19-86)||(31018577-31018644)
chr2 (45-100)||(31727830-31727885)
chr2 (19-86)||(37558964-37559031)
chr2 (20-94)||(20473301-20473375)
chr2 (19-97)||(20539679-20539757)
chr2 (20-86)||(30717536-30717602)
chr2 (19-97)||(34784987-34785065)
chr2 (20-97)||(10535765-10535842)
chr2 (19-84)||(12668428-12668493)
chr2 (29-86)||(21374714-21374771)
chr2 (37-86)||(24894376-24894425)
chr2 (38-75)||(27084260-27084297)
chr2 (20-73)||(29970555-29970608)
chr2 (26-63)||(35191591-35191628)
chr2 (45-86)||(38117190-38117231)
chr2 (19-60)||(38355892-38355933)
chr2 (57-117)||(6290113-6290173)
chr2 (19-95)||(15972851-15972927)
[»] chr7 (61 HSPs)
chr7 (19-115)||(15902780-15902876)
chr7 (19-93)||(20549771-20549845)
chr7 (19-97)||(26329387-26329465)
chr7 (21-86)||(32308107-32308172)
chr7 (19-98)||(22602715-22602794)
chr7 (19-101)||(3721066-3721147)
chr7 (19-100)||(7328696-7328777)
chr7 (21-86)||(22868029-22868094)
chr7 (19-95)||(7438684-7438760)
chr7 (19-86)||(9482921-9482988)
chr7 (19-117)||(19206005-19206104)
chr7 (19-94)||(22484004-22484079)
chr7 (20-86)||(6630918-6630984)
chr7 (35-97)||(11722119-11722181)
chr7 (19-97)||(26733280-26733358)
chr7 (19-97)||(27945017-27945095)
chr7 (19-100)||(1433427-1433508)
chr7 (21-78)||(5548671-5548728)
chr7 (28-76)||(29787383-29787431)
chr7 (19-86)||(5835234-5835301)
chr7 (19-82)||(24339633-24339696)
chr7 (30-97)||(30731013-30731080)
chr7 (19-97)||(2425738-2425816)
chr7 (28-117)||(12289069-12289159)
chr7 (23-73)||(16341496-16341546)
chr7 (21-67)||(17851437-17851483)
chr7 (21-95)||(18013081-18013155)
chr7 (19-73)||(19992001-19992055)
chr7 (24-86)||(23191883-23191945)
chr7 (20-86)||(43249980-43250046)
chr7 (19-84)||(2948672-2948737)
chr7 (29-82)||(25481893-25481946)
chr7 (29-97)||(32094035-32094104)
chr7 (26-99)||(48246825-48246898)
chr7 (20-72)||(12278836-12278888)
chr7 (19-103)||(24105648-24105732)
chr7 (19-75)||(24146814-24146870)
chr7 (19-75)||(27093418-27093474)
chr7 (19-75)||(27184827-27184883)
chr7 (29-97)||(30813788-30813856)
chr7 (28-67)||(2424620-2424659)
chr7 (26-97)||(5235962-5236033)
chr7 (22-117)||(8090033-8090128)
chr7 (19-74)||(32287468-32287523)
chr7 (19-93)||(3520347-3520421)
chr7 (19-65)||(27732244-27732290)
chr7 (38-72)||(45056925-45056959)
chr7 (19-97)||(49107797-49107874)
chr7 (20-97)||(13770667-13770744)
chr7 (21-86)||(21828412-21828477)
chr7 (19-92)||(21880133-21880206)
chr7 (19-76)||(28155567-28155624)
chr7 (45-114)||(28401102-28401171)
chr7 (26-63)||(35493423-35493460)
chr7 (21-86)||(42720897-42720962)
chr7 (27-67)||(1401031-1401071)
chr7 (22-86)||(5233616-5233680)
chr7 (19-95)||(11061081-11061157)
chr7 (22-62)||(17307904-17307944)
chr7 (19-67)||(26033466-26033514)
chr7 (21-93)||(35861944-35862016)
[»] chr5 (63 HSPs)
chr5 (19-86)||(3966490-3966557)
chr5 (19-116)||(28588679-28588775)
chr5 (19-100)||(16203800-16203881)
chr5 (19-97)||(21191061-21191139)
chr5 (19-114)||(11685898-11685993)
chr5 (21-93)||(27144443-27144515)
chr5 (39-97)||(26716120-26716178)
chr5 (39-97)||(26985860-26985918)
chr5 (20-73)||(41091263-41091316)
chr5 (22-73)||(6471897-6471948)
chr5 (19-73)||(18421846-18421900)
chr5 (21-86)||(12264836-12264901)
chr5 (19-72)||(30502393-30502446)
chr5 (19-72)||(30542736-30542789)
chr5 (29-86)||(43001787-43001844)
chr5 (23-95)||(18592051-18592123)
chr5 (19-86)||(6247609-6247676)
chr5 (19-86)||(14674256-14674323)
chr5 (20-116)||(21576751-21576849)
chr5 (29-116)||(41633692-41633779)
chr5 (19-97)||(24906306-24906384)
chr5 (20-86)||(31084310-31084376)
chr5 (19-100)||(22423817-22423898)
chr5 (22-75)||(32766951-32767004)
chr5 (19-72)||(36838544-36838597)
chr5 (19-100)||(37328849-37328930)
chr5 (22-91)||(38749571-38749640)
chr5 (29-86)||(39698528-39698585)
chr5 (19-116)||(2436878-2436976)
chr5 (29-97)||(6326312-6326380)
chr5 (40-100)||(19552569-19552629)
chr5 (29-97)||(21522726-21522794)
chr5 (29-97)||(21533292-21533360)
chr5 (19-83)||(23220973-23221037)
chr5 (22-74)||(39205879-39205931)
chr5 (19-86)||(6035470-6035536)
chr5 (22-97)||(15410456-15410531)
chr5 (19-86)||(19579688-19579755)
chr5 (23-62)||(24273039-24273078)
chr5 (23-62)||(24389136-24389175)
chr5 (19-86)||(26312756-26312823)
chr5 (29-76)||(27932232-27932279)
chr5 (49-95)||(5873548-5873594)
chr5 (20-82)||(19429423-19429485)
chr5 (47-97)||(19820427-19820477)
chr5 (19-97)||(21542006-21542084)
chr5 (19-81)||(21814253-21814315)
chr5 (27-97)||(22013390-22013460)
chr5 (25-87)||(35017023-35017085)
chr5 (37-95)||(40000558-40000616)
chr5 (20-65)||(5467984-5468029)
chr5 (45-86)||(17123035-17123076)
chr5 (26-67)||(17593734-17593775)
chr5 (19-68)||(23012413-23012462)
chr5 (20-65)||(23015995-23016040)
chr5 (26-63)||(28262408-28262445)
chr5 (20-81)||(34879342-34879403)
chr5 (45-86)||(38464395-38464436)
chr5 (19-75)||(7677703-7677759)
chr5 (19-63)||(14873527-14873571)
chr5 (48-84)||(38816729-38816765)
chr5 (19-55)||(39758290-39758326)
chr5 (19-75)||(42893358-42893414)
[»] chr1 (76 HSPs)
chr1 (19-116)||(36878417-36878515)
chr1 (22-117)||(27471574-27471669)
chr1 (19-97)||(9709796-9709874)
chr1 (22-92)||(19562629-19562699)
chr1 (19-116)||(5898271-5898368)
chr1 (21-97)||(398772-398848)
chr1 (1-85)||(31015031-31015115)
chr1 (29-116)||(14359537-14359623)
chr1 (19-97)||(10572594-10572672)
chr1 (20-86)||(17831537-17831603)
chr1 (19-73)||(40181871-40181925)
chr1 (19-75)||(1864885-1864941)
chr1 (22-86)||(6427337-6427401)
chr1 (21-97)||(7918218-7918294)
chr1 (29-100)||(13011230-13011302)
chr1 (26-86)||(15641042-15641102)
chr1 (38-97)||(1262860-1262919)
chr1 (19-86)||(2896126-2896193)
chr1 (23-74)||(19324561-19324612)
chr1 (22-81)||(25098563-25098622)
chr1 (23-81)||(12443469-12443527)
chr1 (22-76)||(13436455-13436509)
chr1 (19-116)||(19058861-19058959)
chr1 (28-86)||(25452162-25452220)
chr1 (19-84)||(1486714-1486779)
chr1 (19-97)||(5944257-5944337)
chr1 (22-115)||(36905955-36906048)
chr1 (19-116)||(48450592-48450689)
chr1 (19-115)||(23636054-23636150)
chr1 (19-75)||(38503318-38503374)
chr1 (19-63)||(44482240-44482284)
chr1 (19-117)||(51409980-51410079)
chr1 (18-97)||(10577739-10577818)
chr1 (19-86)||(13997870-13997937)
chr1 (19-74)||(20157355-20157410)
chr1 (21-76)||(25361883-25361938)
chr1 (19-73)||(29229461-29229516)
chr1 (19-86)||(37598819-37598885)
chr1 (19-74)||(38075975-38076030)
chr1 (29-83)||(113289-113343)
chr1 (20-86)||(3490396-3490462)
chr1 (19-97)||(5376505-5376583)
chr1 (19-81)||(9828036-9828098)
chr1 (19-81)||(14332647-14332709)
chr1 (21-95)||(17754289-17754363)
chr1 (27-97)||(34298412-34298482)
chr1 (19-73)||(34371714-34371767)
chr1 (21-71)||(34712390-34712440)
chr1 (19-93)||(38078666-38078740)
chr1 (19-97)||(41877475-41877553)
chr1 (21-66)||(10233260-10233305)
chr1 (19-116)||(28273093-28273190)
chr1 (19-76)||(39953151-39953208)
chr1 (19-75)||(1704997-1705053)
chr1 (26-98)||(16927197-16927269)
chr1 (21-81)||(30847727-30847787)
chr1 (38-97)||(609482-609541)
chr1 (19-86)||(6415006-6415073)
chr1 (19-93)||(9690279-9690351)
chr1 (19-86)||(22881621-22881688)
chr1 (19-86)||(42359454-42359521)
chr1 (19-86)||(46348388-46348455)
chr1 (51-93)||(20999588-20999630)
chr1 (19-97)||(25272458-25272536)
chr1 (21-75)||(26238120-26238173)
chr1 (20-86)||(40285660-40285726)
chr1 (19-116)||(9629905-9630002)
chr1 (37-82)||(10475000-10475045)
chr1 (26-63)||(20131987-20132024)
chr1 (22-75)||(23738676-23738729)
chr1 (29-86)||(31672910-31672967)
chr1 (19-87)||(29163386-29163454)
chr1 (19-55)||(30749858-30749894)
chr1 (19-55)||(30771309-30771345)
chr1 (55-116)||(35702629-35702691)
chr1 (45-97)||(40917727-40917779)
[»] chr6 (70 HSPs)
chr6 (19-86)||(7996383-7996450)
chr6 (19-86)||(8022351-8022418)
chr6 (19-86)||(7265598-7265665)
chr6 (21-84)||(19040341-19040404)
chr6 (20-87)||(26562675-26562742)
chr6 (19-97)||(7086771-7086849)
chr6 (19-73)||(9025499-9025553)
chr6 (19-97)||(9027154-9027232)
chr6 (19-97)||(9658855-9658933)
chr6 (19-82)||(13364710-13364773)
chr6 (20-99)||(13851710-13851789)
chr6 (19-114)||(16833267-16833362)
chr6 (19-117)||(34073352-34073451)
chr6 (19-116)||(10770679-10770776)
chr6 (19-76)||(21924940-21924997)
chr6 (28-93)||(34290091-34290156)
chr6 (23-100)||(1532211-1532290)
chr6 (19-86)||(5732515-5732582)
chr6 (19-82)||(9629374-9629437)
chr6 (19-86)||(16766684-16766751)
chr6 (19-86)||(19044451-19044518)
chr6 (19-82)||(33001294-33001357)
chr6 (19-97)||(9107375-9107453)
chr6 (27-100)||(3398592-3398664)
chr6 (28-97)||(8805586-8805655)
chr6 (21-97)||(10339132-10339209)
chr6 (52-97)||(18803549-18803594)
chr6 (19-72)||(30866149-30866202)
chr6 (20-100)||(1681731-1681811)
chr6 (19-75)||(7377977-7378033)
chr6 (29-97)||(8776988-8777056)
chr6 (29-97)||(12696300-12696368)
chr6 (21-85)||(17341671-17341735)
chr6 (19-86)||(7723255-7723322)
chr6 (19-86)||(7938103-7938170)
chr6 (19-74)||(9195759-9195814)
chr6 (19-82)||(20371115-20371178)
chr6 (19-65)||(9617442-9617488)
chr6 (19-97)||(10294083-10294161)
chr6 (20-86)||(10842519-10842585)
chr6 (19-97)||(13360377-13360455)
chr6 (19-76)||(30851599-30851654)
chr6 (19-93)||(31959139-31959213)
chr6 (19-97)||(34595110-34595188)
chr6 (47-92)||(677818-677863)
chr6 (19-76)||(6665210-6665267)
chr6 (19-84)||(7977835-7977900)
chr6 (20-61)||(11591876-11591917)
chr6 (29-86)||(17841604-17841661)
chr6 (22-66)||(7248365-7248409)
chr6 (19-87)||(7801161-7801229)
chr6 (20-76)||(8931608-8931664)
chr6 (49-115)||(20370515-20370585)
chr6 (19-82)||(26178686-26178749)
chr6 (19-86)||(28152086-28152152)
chr6 (5-65)||(31579212-31579276)
chr6 (22-73)||(32511674-32511725)
chr6 (28-95)||(32839660-32839727)
chr6 (19-97)||(426519-426597)
chr6 (19-97)||(8365524-8365602)
chr6 (19-81)||(16488595-16488657)
chr6 (19-81)||(18367828-18367890)
chr6 (24-86)||(24833243-24833305)
chr6 (22-84)||(32298615-32298677)
chr6 (19-97)||(34172170-34172247)
chr6 (19-92)||(32299256-32299329)
chr6 (20-76)||(1191706-1191762)
chr6 (22-66)||(7151419-7151463)
chr6 (19-95)||(11784221-11784297)
chr6 (27-75)||(12686408-12686455)
[»] chr3 (62 HSPs)
chr3 (1-116)||(26492186-26492307)
chr3 (19-97)||(25093478-25093556)
chr3 (5-82)||(32804529-32804608)
chr3 (19-97)||(8383233-8383311)
chr3 (22-75)||(11313808-11313861)
chr3 (19-116)||(26508067-26508164)
chr3 (19-75)||(7928448-7928504)
chr3 (22-86)||(25948895-25948959)
chr3 (19-115)||(8789555-8789652)
chr3 (19-98)||(28678278-28678357)
chr3 (29-87)||(4987306-4987364)
chr3 (19-97)||(11665920-11665998)
chr3 (19-93)||(14829670-14829743)
chr3 (30-116)||(14979138-14979224)
chr3 (27-97)||(30994895-30994965)
chr3 (29-86)||(21479105-21479162)
chr3 (20-97)||(24205047-24205124)
chr3 (22-97)||(2731790-2731863)
chr3 (25-73)||(9624641-9624689)
chr3 (31-112)||(10954911-10954994)
chr3 (38-97)||(5441055-5441114)
chr3 (19-82)||(8039840-8039903)
chr3 (19-97)||(9800016-9800094)
chr3 (19-73)||(10690267-10690321)
chr3 (19-97)||(28917977-28918055)
chr3 (21-67)||(49505161-49505207)
chr3 (19-81)||(49651791-49651853)
chr3 (19-100)||(4990972-4991053)
chr3 (28-73)||(11251978-11252023)
chr3 (20-97)||(11658791-11658868)
chr3 (24-81)||(12703999-12704056)
chr3 (19-100)||(16000021-16000102)
chr3 (22-75)||(16192758-16192811)
chr3 (28-73)||(27277852-27277897)
chr3 (20-73)||(34307786-34307839)
chr3 (19-72)||(45451554-45451607)
chr3 (46-86)||(6525712-6525752)
chr3 (19-87)||(20691305-20691373)
chr3 (38-86)||(40052319-40052367)
chr3 (24-118)||(1438765-1438853)
chr3 (22-97)||(10455766-10455841)
chr3 (21-84)||(13620771-13620834)
chr3 (39-82)||(24633757-24633800)
chr3 (19-82)||(34185128-34185191)
chr3 (19-86)||(38731205-38731272)
chr3 (27-81)||(5407260-5407314)
chr3 (47-97)||(12674534-12674584)
chr3 (19-73)||(25211539-25211593)
chr3 (20-66)||(29508451-29508497)
chr3 (20-82)||(35994744-35994805)
chr3 (20-81)||(1830335-1830396)
chr3 (29-86)||(10268501-10268558)
chr3 (25-66)||(11493372-11493413)
chr3 (25-86)||(15812832-15812893)
chr3 (21-86)||(26290358-26290423)
chr3 (19-75)||(7614420-7614476)
chr3 (19-75)||(14028005-14028061)
chr3 (29-97)||(15796309-15796377)
chr3 (30-86)||(21720751-21720807)
chr3 (29-81)||(34910309-34910361)
chr3 (19-74)||(40993340-40993396)
chr3 (19-95)||(55401053-55401129)
[»] chr8 (55 HSPs)
chr8 (19-86)||(13844601-13844668)
chr8 (24-115)||(29775994-29776085)
chr8 (21-95)||(24362209-24362283)
chr8 (19-81)||(31236582-31236644)
chr8 (19-115)||(20873027-20873123)
chr8 (19-81)||(27213539-27213601)
chr8 (20-74)||(34897084-34897138)
chr8 (19-76)||(11927091-11927148)
chr8 (22-98)||(11803234-11803310)
chr8 (19-86)||(4786343-4786410)
chr8 (19-74)||(12606834-12606889)
chr8 (22-73)||(14731712-14731763)
chr8 (19-86)||(20679400-20679467)
chr8 (23-86)||(39954288-39954351)
chr8 (19-97)||(29510309-29510387)
chr8 (19-76)||(11944662-11944719)
chr8 (29-86)||(36450769-36450826)
chr8 (19-75)||(4611532-4611588)
chr8 (29-97)||(4673440-4673508)
chr8 (19-99)||(28384999-28385079)
chr8 (21-68)||(3025556-3025603)
chr8 (31-86)||(13436981-13437036)
chr8 (19-66)||(14134706-14134753)
chr8 (19-86)||(15816134-15816201)
chr8 (29-117)||(22595949-22596038)
chr8 (38-97)||(22651952-22652011)
chr8 (19-97)||(926793-926871)
chr8 (19-97)||(24669409-24669487)
chr8 (28-86)||(37283824-37283882)
chr8 (19-73)||(40332191-40332245)
chr8 (20-86)||(44067503-44067569)
chr8 (19-76)||(7658460-7658517)
chr8 (20-73)||(12570514-12570567)
chr8 (21-86)||(31109525-31109590)
chr8 (22-98)||(36934645-36934721)
chr8 (26-97)||(13203617-13203688)
chr8 (19-86)||(25192352-25192419)
chr8 (32-87)||(41831958-41832013)
chr8 (19-97)||(12985368-12985446)
chr8 (20-86)||(18407706-18407772)
chr8 (19-73)||(25566841-25566895)
chr8 (39-116)||(27067323-27067403)
chr8 (19-65)||(33382024-33382070)
chr8 (19-65)||(33405389-33405435)
chr8 (19-97)||(34222924-34223001)
chr8 (21-78)||(20785472-20785529)
chr8 (21-97)||(24413566-24413643)
chr8 (26-63)||(24447039-24447076)
chr8 (19-84)||(25172703-25172768)
chr8 (26-63)||(26529751-26529788)
chr8 (22-63)||(30133160-30133201)
chr8 (37-73)||(18067957-18067993)
chr8 (29-97)||(22197757-22197825)
chr8 (19-55)||(26902180-26902216)
chr8 (29-85)||(31556985-31557040)
[»] chr4 (57 HSPs)
chr4 (7-82)||(40613441-40613516)
chr4 (19-117)||(21945458-21945557)
chr4 (21-97)||(14126118-14126194)
chr4 (22-86)||(15029752-15029816)
chr4 (22-86)||(36635311-36635375)
chr4 (21-86)||(35723391-35723457)
chr4 (29-97)||(3947781-3947849)
chr4 (27-75)||(8423731-8423779)
chr4 (20-76)||(13134447-13134503)
chr4 (23-86)||(13783268-13783331)
chr4 (23-74)||(22440609-22440660)
chr4 (19-74)||(26504304-26504359)
chr4 (19-117)||(49430981-49431080)
chr4 (24-86)||(903909-903971)
chr4 (19-65)||(5775363-5775409)
chr4 (47-97)||(5832727-5832777)
chr4 (22-72)||(15659768-15659818)
chr4 (27-97)||(16402224-16402294)
chr4 (19-97)||(23292991-23293069)
chr4 (55-97)||(28720852-28720894)
chr4 (19-72)||(16189710-16189763)
chr4 (22-87)||(20743286-20743351)
chr4 (26-117)||(21539879-21539976)
chr4 (20-81)||(24343499-24343560)
chr4 (28-73)||(56257933-56257978)
chr4 (19-75)||(9996838-9996894)
chr4 (19-115)||(12797343-12797438)
chr4 (22-70)||(18576045-18576093)
chr4 (29-97)||(19482644-19482712)
chr4 (21-73)||(56488517-56488569)
chr4 (38-97)||(847927-847986)
chr4 (50-101)||(31638068-31638119)
chr4 (28-87)||(32910537-32910596)
chr4 (19-66)||(54580028-54580075)
chr4 (27-85)||(1747200-1747258)
chr4 (19-97)||(5414177-5414255)
chr4 (24-93)||(7970501-7970568)
chr4 (44-86)||(18743867-18743909)
chr4 (29-107)||(40481603-40481680)
chr4 (26-63)||(3731213-3731250)
chr4 (19-76)||(4672090-4672147)
chr4 (46-103)||(12628617-12628674)
chr4 (28-81)||(17425403-17425456)
chr4 (19-72)||(29205445-29205498)
chr4 (24-81)||(35952627-35952684)
chr4 (45-82)||(41601670-41601707)
chr4 (21-73)||(3712516-3712568)
chr4 (5-66)||(7214511-7214574)
chr4 (24-76)||(7670681-7670733)
chr4 (19-95)||(12895279-12895355)
chr4 (50-86)||(17345451-17345487)
chr4 (19-86)||(30298933-30299001)
chr4 (19-86)||(30327801-30327869)
chr4 (19-67)||(30982883-30982931)
chr4 (19-67)||(33950142-33950190)
chr4 (27-75)||(35161034-35161082)
chr4 (30-74)||(38148741-38148785)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-100)||(135317-135398)
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-95)||(263379-263453)
[»] scaffold0652 (1 HSPs)
scaffold0652 (19-100)||(467-548)
[»] scaffold0036 (1 HSPs)
scaffold0036 (19-86)||(9752-9819)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-97)||(21019-21097)
[»] scaffold0123 (1 HSPs)
scaffold0123 (19-73)||(44530-44584)
[»] scaffold0103 (1 HSPs)
scaffold0103 (29-86)||(51798-51855)
[»] scaffold0004 (1 HSPs)
scaffold0004 (29-86)||(92794-92851)
[»] scaffold0223 (1 HSPs)
scaffold0223 (29-97)||(20148-20216)
[»] scaffold0044 (1 HSPs)
scaffold0044 (19-83)||(53170-53234)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-117)||(241549-241648)
[»] scaffold1528 (1 HSPs)
scaffold1528 (21-95)||(1013-1087)
[»] scaffold0050 (1 HSPs)
scaffold0050 (19-112)||(70238-70332)
[»] scaffold0306 (1 HSPs)
scaffold0306 (37-86)||(13387-13436)
[»] scaffold0152 (1 HSPs)
scaffold0152 (37-86)||(21891-21940)
[»] scaffold0022 (2 HSPs)
scaffold0022 (20-97)||(90819-90896)
scaffold0022 (22-86)||(99880-99944)
[»] scaffold0007 (1 HSPs)
scaffold0007 (20-97)||(225274-225351)
[»] scaffold0110 (1 HSPs)
scaffold0110 (19-87)||(28836-28904)
[»] scaffold0085 (1 HSPs)
scaffold0085 (20-117)||(26348-26446)
[»] scaffold0027 (1 HSPs)
scaffold0027 (29-97)||(46658-46726)
[»] scaffold0376 (1 HSPs)
scaffold0376 (19-73)||(6312-6366)
[»] scaffold0246 (1 HSPs)
scaffold0246 (29-107)||(19542-19619)
[»] scaffold0053 (1 HSPs)
scaffold0053 (47-97)||(8774-8824)
[»] scaffold0018 (2 HSPs)
scaffold0018 (29-97)||(178833-178902)
scaffold0018 (29-86)||(192264-192321)
[»] scaffold0450 (1 HSPs)
scaffold0450 (39-87)||(8660-8708)
[»] scaffold0361 (1 HSPs)
scaffold0361 (29-81)||(14522-14574)
[»] scaffold0066 (1 HSPs)
scaffold0066 (29-81)||(33378-33430)
[»] scaffold0019 (1 HSPs)
scaffold0019 (29-86)||(71710-71769)


Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 35449581 - 35449373
Alignment:
Q  5 gacatgtgtcgtgcccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtatt 104  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  35449581 gacatgtgtcgtgtctgacacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtcgtgttcgtatt 35449482  T
Q  105 cgtgcttcatagaagtaaagtaagcattatgaatggaaatagtt-gaaggttgaagaatataggtacctttccttggcagaagtaagcccaattaagaag 203  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35449481 cgtgcttcatagaagtaaagtaagcattatgaatggaaatagttggaaggttgaagaatataggtacctttccttggcagaagtaagcccaattaagaag 35449382  T
Q  204 agagttaga 212  Q
    |||||||||    
T  35449381 agagttaga 35449373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 21782832 - 21782901
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgt 21782901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 37411250 - 37411323
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||||    
T  37411250 cgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 21616813 - 21616738
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |||| ||||  |||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgt 21616738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 18276575 - 18276497
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||| |||||||||| ||||||| ||| ||||||    
T  18276575 ccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgt 18276497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 30404855 - 30404953
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 117  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||| | |||||||| |||||||||  ||||| ||| ||||| |||||||||||||    
T  30404855 ccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccgtatccgtgcttcataga 30404953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 23718080 - 23718013
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||  |||||||||    
T  23718080 ccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgt 23718013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 24105752 - 24105685
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||  |||||||||    
T  24105752 ccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgt 24105685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 18420439 - 18420520
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||| ||||||| |  |||||| |||||||||||||||||||||||||||| ||| ||||||| | ||| |||||||||    
T  18420439 ccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtatatgtctcgtgttcg 18420520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 896265 - 896198
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||| |||||  |||| | ||||||||||||||| |||||||||||||||| |||||||||    
T  896265 ccgacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt 896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 44860374 - 44860320
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||| |||||    
T  44860374 ccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 31808129 - 31808064
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||| ||||||| ||||||||| | ||||||||||| |||||||  |||||||||    
T  31808129 gacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgt 31808064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 36409641 - 36409730
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 117  Q
    |||||||| || |||| ||||||||| ||||||||| ||| |||||||||||| ||| |  |||||||||  |||| |||||||||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctgtatccgtgcttcataga 36409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 28677958 - 28677906
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtcggc 28677906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 31284103 - 31284035
Alignment:
Q  19 ccgacacata-taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||| |||||||  || ||| |||||||||||||||||||||||||||||||| ||| |||||    
T  31284103 ccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgt 31284035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 5367246 - 5367199
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattag 66  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||    
T  5367246 ccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 20242732 - 20242799
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||||||||||| |||  |||||  |||||||| |||||||||    
T  20242732 ccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgt 20242799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 30527600 - 30527667
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| || |||| | ||||||||||||||||||| |||||| ||  |||||||||    
T  30527600 ccgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgt 30527667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 4332971 - 4332902
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||  |||||| |||||||||| |||||||||| |||||||||||||| ||| | |||| |||||    
T  4332971 ataattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgt 4332902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 18841018 - 18841115
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| | ||||||| || |||| ||| ||||| ||||||||||||  ||||| || |||||||||   |||||||| ||||| ||||||||||||    
T  18841018 ccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccgtatacgtgcttcatag 18841115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 18889596 - 18889644
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||||||| ||||| ||||||| |||||||||||||| ||||||||    
T  18889596 ccgacacatatgattacactgaattatgtgattttctcaatttattagc 18889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 29664033 - 29663985
Alignment:
Q  49 attttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||| |||||||||||||| ||||| ||||||||||| ||||||||||    
T  29664033 attttttcaaattattagcactgtcgacatgtcagtgtctgtgtcgtgt 29663985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 34691810 - 34691858
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||||||||||||| ||||||| | ||||||| |||||||||||||    
T  34691810 ccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 34714222 - 34714270
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||||||||||||| ||||||| | ||||||| |||||||||||||    
T  34714222 ccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 36756349 - 36756425
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||| ||||||||| ||||||| ||| ||||  ||||||||||||  |||||| | ||||||||| ||||||||    
T  36756349 ccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 39279729 - 39279665
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcag 83  Q
    ||||||||||||||||| ||||||| | ||||||||||| ||||||| | |||| ||| ||||||    
T  39279729 ccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtcag 39279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 42832281 - 42832337
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||| ||||||||| ||||| | ||| ||||||||||||||||||| |||||||    
T  42832281 ccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcgg 42832337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 12224244 - 12224177
Alignment:
Q  50 ttttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc-gtattcgtgcttcatag 116  Q
    |||| |||||||||||||  ||| ||| ||||| |||||||||||||||| |||| ||||||||||||    
T  12224244 ttttttcaaattattagctatgttggcgtgtcaatgtttgtgtcgtgttcggtatccgtgcttcatag 12224177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 15909641 - 15909704
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||| ||||||| ||| ||||||||||| | ||||| || ||||| |||||||||    
T  15909641 cacatataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgt 15909704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 21624282 - 21624239
Alignment:
Q  57 aaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcg 21624239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 31018644 - 31018577
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||| || |||  ||||||||||| ||||||||||| |||| ||| |||||||||    
T  31018644 ccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgt 31018577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 31727885 - 31727830
Alignment:
Q  45 tgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    |||||||||||||||||||||| |||||| || ||||||| | |||||| ||||||    
T  31727885 tgtgattttctcaaattattagtagtgtcagcgtgtcagtatctgtgtcatgttcg 31727830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 37559031 - 37558964
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | |||||||  |||||| |||||||||  |||||||||||| |||||||| |||||||||    
T  37559031 ccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgt 37558964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 20473375 - 20473301
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcg 94  Q
    |||||| | ||||||| ||||||| | ||| ||| | ||||||||||  |||||||||||||||||| |||||||    
T  20473375 cgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtcg 20473301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 20539679 - 20539757
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| || |||| | ||||||| ||||||||||||| |||||| | |||||||||  |||||||||    
T  20539679 ccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgt 20539757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 30717536 - 30717602
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| | ||||||| ||||||| ||||||||| |||||||||||||  ||||||  |||||||||    
T  30717536 cgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgt 30717602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 34784987 - 34785065
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||| || |||| ||||||||||| |||  |||||  |||||||  |||||||||  |||||||||    
T  34784987 ccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgt 34785065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 10535765 - 10535842
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| ||| ||||| ||||||| ||| ||||||||||||||||| | |||||||| | | ||| | ||||||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgt 10535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 12668428 - 12668493
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    ||||||| ||||||||| ||||||| ||| ||||| ||||||||||||   ||||||| |||||||    
T  12668428 ccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 21374714 - 21374771
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||| ||| ||||| ||||||||||||| |||||||| ||| |||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgt 21374771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 24894425 - 24894376
Alignment:
Q  37 ctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||| | ||||||||||| |||||||| |||||||||    
T  24894425 ctgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgt 24894376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 27084297 - 27084260
Alignment:
Q  38 tgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||||| | |||||||||||||||||||||||||||||    
T  27084297 tgaattatatgattttctcaaattattagcagtgtcgg 27084260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 29970555 - 29970608
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||| ||||| ||||| | || |||||||||||||||||||| |||||    
T  29970555 cgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtc 29970608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 35191591 - 35191628
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  35191591 atataattaccctaaattatgtgattttctcaaattat 35191628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 38117190 - 38117231
Alignment:
Q  45 tgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||| ||||||||||||| |||||||| |||||||||    
T  38117190 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 38117231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 38355892 - 38355933
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaat 60  Q
    |||||||||||||| || ||||||| ||||||||||||||||    
T  38355892 ccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 6290173 - 6290113
Alignment:
Q  57 aaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 117  Q
    ||||||||||| ||| || | || ||||||| |||||||||  ||||||||||||||||||    
T  6290173 aaattattagcggtgccgacgtgccagtgttcgtgtcgtgtctgtattcgtgcttcataga 6290113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 15972927 - 15972851
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||| | ||||||| ||||||| ||| ||||| |||||||||||   |||||||| |||||||||  |||||||    
T  15972927 ccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 15902876 - 15902780
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 115  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||||   |||||||||||||||||| |||||||||| |||||||||||||||||    
T  15902876 ccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccgtattcgtgcttcata 15902780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 20549845 - 20549771
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||| |||||||  ||||||||| ||||||    
T  20549845 ccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 26329387 - 26329465
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||| |  ||||||| ||||||||| ||||||||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgt 26329465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 32308172 - 32308107
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  32308172 gacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 32308107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 22602715 - 22602794
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 98  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||  | |||||||| ||||||||  |||||||||||    
T  22602715 ccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgtt 22602794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 3721147 - 3721066
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgt 101  Q
    ||||||||||||||||  || |||| |||||||||||||||||||||||| |||||  ||||||||||  |||||||||||||    
T  3721147 ccgacacatataattatactaaattatgtgattttctcaaattattagca-tgtcgaaatgtcagtgtccgtgtcgtgttcgt 3721066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 7328696 - 7328777
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||||||||||||| || |||| ||| |||||||||||||||||||||| ||| | ||| | ||| |||||||||||||    
T  7328696 ccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcg 7328777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 22868094 - 22868029
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||  |||||||| |||||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgt 22868029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7438760 - 7438684
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||| | |||||||  |||||| ||||||||| ||||||||||| | |||||||||||||||||||| ||||||    
T  7438760 ccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgtttatgtcgt 7438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 9482988 - 9482921
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||  ||||||  |||||||||    
T  9482988 ccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgt 9482921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 19206104 - 19206005
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt-tcgtattcgtgcttcataga 117  Q
    ||||||||||||||||   |||||| ||||||||||||||||||||||| |||||||| |||  ||||  ||||||||| | |||| ||||||| |||||    
T  19206104 ccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtgcttaataga 19206005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 22484079 - 22484004
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcg 94  Q
    ||||||||||||||||  ||||||| ||  ||||||| ||||||||||| |||||||| ||||||||| |||||||    
T  22484079 ccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 6630918 - 6630984
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||||| |||||||  |||| ||||||||||||||||  |||||||| |||||||||    
T  6630918 cgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgt 6630984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 11722119 - 11722181
Alignment:
Q  35 ccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||| ||||||||||||||||| ||||| |||||||| |||||||||  |||||||||    
T  11722119 ccctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgt 11722181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 26733358 - 26733280
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||| ||||||  ||||||| ||||||||| ||||||||||||| |||||| | |||||||||  |||||||||    
T  26733358 ccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 26733280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 27945095 - 27945017
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||| ||||||||||||||||||  |||||||| |||||||||  |||||||||    
T  27945095 ccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgt 27945017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 1433508 - 1433427
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||||||||||||| |  |||  ||||||||||||||||||||| | |||||||| ||||| |||  ||||||||||||    
T  1433508 ccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcg 1433427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 5548728 - 5548671
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcat 78  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| ||| ||||||||||    
T  5548728 gacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 29787383 - 29787431
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggc 29787431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 5835301 - 5835234
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||| ||||||||||| ||||||  |||||||| | |||||||    
T  5835301 ccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgt 5835234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 24339696 - 24339633
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||    
T  24339696 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 24339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 30731080 - 30731013
Alignment:
Q  30 aattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| ||||||| |||||||||||||||||||| || |||||||| || || ||| ||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgt 30731013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 2425738 - 2425816
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||| || | || |||| ||||||||||||||||||||| | ||| |||| ||||||| | ||||||||||    
T  2425738 ccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgt 2425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 12289159 - 12289069
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagt-gtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 117  Q
    |||||| | ||||||| |||||||||||||||||||||||||| | |||| |||| ||||  |||| ||||  |||| |||||||||||||    
T  12289159 ataattccactgaattatgtgattttctcaaattattagcagtggccggcgtgtcggtgtccgtgttgtgtctgtatccgtgcttcataga 12289069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 16341546 - 16341496
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||||||||| || |||| ||||||||||||||||||||| |||||||    
T  16341546 cacatataattacacttaattatgtgattttctcaaattattatcagtgtc 16341496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 17851483 - 17851437
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaattattagc 17851437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 18013081 - 18013155
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||||||||||| ||||||| ||| ||||| | |||||||||| |||||| | ||||||||||  |||||||    
T  18013081 gacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgt 18013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 19992055 - 19992001
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||| ||||||||| ||||| | ||||||||||||||||||||||| |||||    
T  19992055 ccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 23191945 - 23191883
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||| ||||||| ||||| | ||||||||||||||||||||||| |||||||| | |||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgt 23191883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 43250046 - 43249980
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| ||||||||| ||| ||| ||| ||||||||||||||||| | |||||||| |||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 43249980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 2948737 - 2948672
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    ||||||||||||||||| || ||||  |||||||||| ||||||| ||| |||||||| |||||||    
T  2948737 ccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagt 2948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 25481946 - 25481893
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 25481893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 32094035 - 32094104
Alignment:
Q  29 taattaccctgaattctgtgattttct-caaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||||||||| | |||||||||||  |||| ||||||| ||||||||||||||||    
T  32094035 taattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgtttgtgtcgtgt 32094104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 48246825 - 48246898
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc 99  Q
    ||||||||||  ||| || |||||||||||||||||| || |||||||| | ||||| ||| ||||||||||||    
T  48246825 atataattacattgagttgtgtgattttctcaaattaataacagtgtcgacgtgtcattgtctgtgtcgtgttc 48246898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 12278888 - 12278836
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    |||||||||||||||| ||||||| ||| ||||||| ||||||||| ||||||    
T  12278888 cgacacatataattacactgaattatgtcattttcttaaattattatcagtgt 12278836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 24105732 - 24105648
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtat 103  Q
    ||||||| | ||||||| ||||||  ||  ||||| ||||||||||||| |||||||| |||||||||  ||||||||| |||||    
T  24105732 ccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtat 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 24146870 - 24146814
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||||||||||   |||||| ||||||||||| |||||||||||| ||||||    
T  24146870 ccgacacatataattatattgaattatgtgattttctaaaattattagcattgtcgg 24146814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 27093418 - 27093474
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||| ||||||||||| || |||| ||||||||||| ||||||||||| |||||||    
T  27093418 ccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 27184883 - 27184827
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||| ||||||||||| || |||| ||||||||||| ||||||||||| |||||||    
T  27184883 ccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 30813856 - 30813788
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||| |||||||||||||||||||| ||||||  | ||||||| ||| ||||||    
T  30813856 taattacactgaattatgtaattttctcaaattattagcaatgtcggagtatcagtgtctgtctcgtgt 30813788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 2424659 - 2424620
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagc 67  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 5236033 - 5235962
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||| || |||| | | ||||||| ||||||||||| |||||| | ||||||||| ||||||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgt 5235962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 8090033 - 8090128
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 117  Q
    ||||||| | |||| |||||||  ||||| ||||||||||| |||  ||||| || ||||| |||||||||||||| | |||| ||| ||||||||    
T  8090033 acacatacagttacactgaattacgtgatattctcaaattactagtggtgtctgcgtgtcattgtttgtgtcgtgtccctatttgtgattcataga 8090128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 32287468 - 32287523
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    |||||||||||| || | ||||||| ||||||||||||| ||||||||| ||||||    
T  32287468 ccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtcg 32287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 3520347 - 3520421
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    |||||||||||||||||  |||||| | |||||||||||||| |||| | ||||| || ||||| ||| ||||||    
T  3520347 ccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtcaatgtctgtgtc 3520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 27732244 - 27732290
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattatta 65  Q
    ||||||||||||||||| ||||||| ||| ||||||| |||||||||    
T  27732244 ccgacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 45056925 - 45056959
Alignment:
Q  38 tgaattctgtgattttctcaaattattagcagtgt 72  Q
    |||||| ||||||||||||||||||||||||||||    
T  45056925 tgaattatgtgattttctcaaattattagcagtgt 45056959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 49107874 - 49107797
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||| || || |||| |||| |||||||||||||||||| |||||||  |||||| ||  |||||||||    
T  49107874 ccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgt 49107797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 13770744 - 13770667
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| | ||||||| ||||||| ||| ||||| | ||||||||||| |||||||| | |||||||  |||||||||    
T  13770744 cgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgt 13770667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 21828412 - 21828477
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||| ||||||  || ||| |||||||||||||||||| || | |||||||| |||||||||    
T  21828412 gacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgt 21828477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 21880206 - 21880133
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt 92  Q
    ||||||| | ||||||| ||||||| ||| |||||||||||||||||||  ||||  ||||| |||||| ||||    
T  21880206 ccgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtccacatgttagtgttcgtgt 21880133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 28155624 - 28155567
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    ||||||| | ||||||| | ||||| ||| ||||||||||||||||||| ||||||||    
T  28155624 ccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggc 28155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 28401171 - 28401102
Alignment:
Q  45 tgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcat 114  Q
    |||||||||||||||||||||| ||||||| | |||  |||   ||||||||| ||||| ||||||||||    
T  28401171 tgtgattttctcaaattattagtagtgtcgacgtgttggtgcccgtgtcgtgtccgtatccgtgcttcat 28401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 35493460 - 35493423
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  35493460 atataattaccctaaattatgtgattttctcaaattat 35493423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 42720897 - 42720962
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||||  | |||| ||||||||| ||||||||||||| |||||  | |||||||||    
T  42720897 gacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgt 42720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 1401071 - 1401031
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||||| ||||||| ||||| |||||||||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 5233680 - 5233616
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||| ||  ||| ||||||||||||||||||||| | || ||||  |||||||||    
T  5233680 acacatataattacactagattatgtgattttctcaaattattaaccgtatcggtgtgtcagtgt 5233616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 11061081 - 11061157
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||| | ||||||  || |||| ||||||||| ||||||||||||| |||||||  |||||||||  |||||||    
T  11061081 ccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgt 11061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 17307944 - 17307904
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaatta 62  Q
    |||||||||||||| ||||||| ||| ||||||||||||||    
T  17307944 acacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 26033466 - 26033514
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||| | ||||||| ||||||| ||||||||| |||||||||||||    
T  26033466 ccgacacttgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 35862016 - 35861944
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||| || ||||||  |||||| ||||||||| ||||||||||||  |||||||| ||| |||||| |||||    
T  35862016 gacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttagtgtc 35861944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 3966557 - 3966490
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  3966557 ccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgt 3966490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 28588679 - 28588775
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||| | |||||||| ||||| || || |||||||| ||||||||||||||||||    
T  28588679 ccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtcaatg-ttatgtcgtgtccgtattcgtgcttcatag 28588775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 16203800 - 16203881
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||||||||||||| || |||| || ||||||||||||||||||||||||||||||||| |||||  ||||| ||||||    
T  16203800 ccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcg 16203881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 21191061 - 21191139
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||  |||||||||    
T  21191061 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgt 21191139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 11685993 - 11685898
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt-cgtgttcgtattcgtgcttcat 114  Q
    ||||||||||||||||| || |||| || || ||||||||||||||||| ||||||||||||||||| | |||| ||||| ||||| ||||||||||    
T  11685993 ccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtg-tcgtgtccgtgtccgtatccgtgcttcat 11685898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 27144515 - 27144443
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||||||||||||| || |||| |||||||| |||||||||||||| |||||||| ||||||||| ||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 26716178 - 26716120
Alignment:
Q  39 gaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgt 26716120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 26985918 - 26985860
Alignment:
Q  39 gaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgt 26985860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 41091263 - 41091316
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  41091263 cgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 6471897 - 6471948
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  6471897 acacatataattacactgaattatgtgattttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 18421846 - 18421900
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||    
T  18421846 ccgacacatataattacactggattatgtgattttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 12264836 - 12264901
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||| ||||||  ||| |||||||||||| |||||| |||| |||||||||||||    
T  12264836 gacacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgt 12264901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 30502393 - 30502446
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||| ||||    
T  30502393 ccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 30542736 - 30542789
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||| ||||    
T  30542736 ccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 43001844 - 43001787
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||| ||| ||||| |||||||||||||||||||| |||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgt 43001787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 18592123 - 18592051
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    |||||||||||||  |||||| ||| ||||||| ||| ||||||| |||||||||| ||||||||| ||||||    
T  18592123 cacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgtttatgtcgt 18592051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 6247676 - 6247609
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||  |||||||| |||||||||    
T  6247676 ccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 14674323 - 14674256
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| || |||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 14674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 21576751 - 21576849
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcatag 116  Q
    |||||| | ||||||| ||||||| ||||||||| ||||||||||||| |||| ||| | |||||||| |||||  ||||  |||| ||||||||||||    
T  21576751 cgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtccagtgtctgtatccgtgcttcatag 21576849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 41633779 - 41633692
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| ||||||| ||| | ||| ||||||||||||| |||||||  ||||||| | ||||| |||| |||||||||| |||||||    
T  41633779 taattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtccgtattcgtgtttcatag 41633692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 24906306 - 24906384
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||| ||||| ||||||||||| | |||| ||| |||||||||| |||||||||    
T  24906306 ccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgt 24906384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 31084376 - 31084310
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| | |||||||  |||||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  31084376 cgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 31084310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 22423817 - 22423898
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    |||||| |||||||||   |||||| |||||||||||||||||||||| |||||| |  ||||||| |  ||||||||||||    
T  22423817 ccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgttcg 22423898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 32766951 - 32767004
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||||||||  |||||| || |||||||||||||||||||| |||||||    
T  32766951 acacatataattacattgaattgtgcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 36838597 - 36838544
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    ||||||||||||||||| || |||| ||| ||||||||||||||||||| ||||    
T  36838597 ccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 37328849 - 37328930
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||||| ||||||| ||||||| |||||||||  ||||||||| || |||||||  | |||||||  ||||||||||||    
T  37328849 ccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcg 37328930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 38749571 - 38749640
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtg 91  Q
    ||||||||||||||  |||||| ||| ||||| ||||||||||| | |||||| |||||| |||||||||    
T  38749571 acacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtccgtgtttgtg 38749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 39698585 - 39698528
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||| ||||||||| ||||||||||||| ||||| || |||||||||    
T  39698585 taattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgt 39698528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 2436976 - 2436878
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcatag 116  Q
    |||||||||||||| ||   ||||| |||||||||  |||||||||||| |||||||| |||||||| | |||||  |||| ||||| ||||||||||||    
T  2436976 ccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtg-tcgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 6326312 - 6326380
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||| |||||||||||||| ||||  ||||||| |||||||||  |||||||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgt 6326380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 19552569 - 19552629
Alignment:
Q  40 aattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    |||| ||||||||| ||||||||||| | |||||||| |||||||||  ||||||||||||    
T  19552569 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcg 19552629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 21522794 - 21522726
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||| ||||| | ||||||||||| |||||||| |||||||||  |||||||||    
T  21522794 taattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 21522726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 21533360 - 21533292
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||| ||||| | ||||||||||| |||||||| |||||||||  |||||||||    
T  21533360 taattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 21533292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 23221037 - 23220973
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcag 83  Q
    ||||||||||| || || || |||| ||||||||| ||||||||||||| |||||| ||||||||    
T  23221037 ccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 39205931 - 39205879
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    |||||||||||||| |  |||| | ||||||||||||||||||||||||||||    
T  39205931 acacatataattacacctaattatatgattttctcaaattattagcagtgtcg 39205879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 6035536 - 6035470
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| |||||||||| ||||||| | | |||| |||||||||||||| |||||||| |||||||||    
T  6035536 ccgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagtgt 6035470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 15410456 - 15410531
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||| ||||| ||||||  | | ||||||| ||||||||||| |||||||| |||||||||  |||||||||    
T  15410456 acacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 15410531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 19579755 - 19579688
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||| | || |||| ||||||||||||||||||||||| |||||||| | |||||||    
T  19579755 ccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgt 19579688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 24273039 - 24273078
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaatta 62  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 24389175 - 24389136
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaatta 62  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 26312823 - 26312756
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||| |||||||||||| |||||||   |||||||||||||||||| || || ||||||| |||||||    
T  26312823 ccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgt 26312756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 27932279 - 27932232
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcggc 27932232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 5873548 - 5873594
Alignment:
Q  49 attttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtgtcgt 5873594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 19429485 - 19429423
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||| ||| |||| || | || ||||||||||||||||||||| || |||||||||||||    
T  19429485 cgacacagatatttacactaagttatgtgattttctcaaattattaacattgtcggcatgtca 19429423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 19820427 - 19820477
Alignment:
Q  47 tgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||||||| |||||||  |||||||||  |||||||||    
T  19820427 tgattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgt 19820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 21542084 - 21542006
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||| || || | ||||||||||  |||||||||||||| ||| ||||||||||    
T  21542084 ccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgt 21542006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 21814315 - 21814253
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||||||||||||| ||| ||| ||||||||||| |||  |||||| |||||||| ||||    
T  21814315 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 21814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 22013460 - 22013390
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||| || |||| ||| |||||  |||||||||||| |||||||| |||||||||  |||||||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22013390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 35017085 - 35017023
Alignment:
Q  25 catataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    ||||||||||| || |||| ||||||||||||||||||||||  || ||||| |||| |||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattagtggtttcggcgtgtcggtgtt 35017023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 40000558 - 40000616
Alignment:
Q  37 ctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||| ||||||||| |||||||||||  ||||||| |||||||||||  |||||||    
T  40000558 ctgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 5467984 - 5468029
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattatta 65  Q
    |||||| ||||||||| ||||||| ||||||||| |||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 17123076 - 17123035
Alignment:
Q  45 tgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||||||||| |||| ||| |||||||||    
T  17123076 tgtgattttctcaaattattagcggtgttggcgtgtcagtgt 17123035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 17593734 - 17593775
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattattagc 67  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagc 17593775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 23012413 - 23012462
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagca 68  Q
    |||||||||||||||||  | |||| | ||||||||||||||||||||||    
T  23012413 ccgacacatataattacattaaattatatgattttctcaaattattagca 23012462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 23015995 - 23016040
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattatta 65  Q
    |||||| ||||||||| ||||||| |||||||||||||||| ||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 28262408 - 28262445
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattat 28262445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 34879403 - 34879342
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||||||| ||||| ||||||| | ||||||||||||||| ||||| ||| |||| ||||    
T  34879403 cgacacatattattacactgaattatatgattttctcaaatttttagcggtgccggcgtgtc 34879342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 38464395 - 38464436
Alignment:
Q  45 tgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||||||||  ||||||||||||| ||||    
T  38464395 tgtgattttctcaaattattagttgtgtcggcatgtcggtgt 38464436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 7677759 - 7677703
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||| | ||||| | ||||||| ||||||||| ||||||||||||| |||||||    
T  7677759 ccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 14873571 - 14873527
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||||||| || |||| |||| ||||||||||||||    
T  14873571 ccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 38816729 - 38816765
Alignment:
Q  48 gattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    |||||||||||||||||||| |||||||| |||||||    
T  38816729 gattttctcaaattattagcggtgtcggcgtgtcagt 38816765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 39758326 - 39758290
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct 55  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  39758326 ccgacacatataattacactgaattatgtgattttct 39758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 42893414 - 42893358
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||| | ||||||| ||| ||| ||||||||| ||||||||||||| |||||||    
T  42893414 ccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcgg 42893358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 36878515 - 36878417
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt-cgtgttcgtattcgtgcttcatag 116  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||||| ||||||||| | ||| ||||| ||||| ||||||||||||    
T  36878515 ccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtgcttcatag 36878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 27471574 - 27471669
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 117  Q
    |||||| ||||||| ||||||| |||| |||||||||||||||||| || ||||  ||||||||||||||||| || |||||  ||||||||||||    
T  27471574 acacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtcgcgtccgtatatgtgcttcataga 27471669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 9709874 - 9709796
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||||||   ||||| ||||||||||||||||||||||| |||| |||||||||||||  |||||||||    
T  9709874 ccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgt 9709796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 19562629 - 19562699
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt 92  Q
    |||||||||||||| ||||| | || ||||||||||||||||||||||||||||| |||||||||| ||||    
T  19562629 acacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt 19562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 5898271 - 5898368
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||| ||||||||||| ||||||| ||||||||| ||| ||||||||| |||||||| | ||||||| |||||| ||| ||||| |||||| |||||    
T  5898271 ccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccgtatccgtgctacatag 5898368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 398772 - 398848
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||| ||||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 398848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31015115 - 31015031
Alignment:
Q  1 gtcagacatgtgtcgtgcccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtg 85  Q
    |||||||| |||||||| ||||||| | ||||||| ||||||| ||||||||||||||||||||||| |||| |||  |||||||    
T  31015115 gtcagacacgtgtcgtgtccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtg 31015031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 14359537 - 14359623
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| || |||| ||||||||| ||||||||||||| |||||||| |||| |||| |||||||||| ||||| ||||||||||||    
T  14359537 taattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccgtatccgtgcttcatag 14359623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 10572594 - 10572672
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||| ||||||| | ||||| ||||||||||||||||||||||  |||||||| ||||||||||  ||||||||    
T  10572594 ccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgt 10572672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 17831537 - 17831603
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||| ||||| ||||||  ||||||||||||||||||||||| |||||||| |||||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 17831603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 40181925 - 40181871
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  40181925 ccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 1864885 - 1864941
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| | |||||||    
T  1864885 ccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 6427401 - 6427337
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||| |||| ||| |||||||||    
T  6427401 acacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgt 6427337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 7918218 - 7918294
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||   |||| || ||||| ||| ||||||||||    
T  7918218 gacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgt 7918294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 13011230 - 13011302
Alignment:
Q  29 taattaccctgaattctgtgattttct-caaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||| || |||| ||||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||    
T  13011230 taattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcg 13011302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 15641042 - 15641102
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||| |||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgt 15641102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 1262919 - 1262860
Alignment:
Q  38 tgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| ||||||||||||||||||||||| |||||||| |||| ||||| |||||||||    
T  1262919 tgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgt 1262860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 2896126 - 2896193
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| |||||  ||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  2896126 ccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 2896193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 19324612 - 19324561
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattatcagcagtgtcg 19324561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 25098563 - 25098622
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||| ||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 12443469 - 12443527
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||| |||||| ||||||| ||||||||||||||||||||||| |||||||| ||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtc 12443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 13436509 - 13436455
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||||||||||| ||||||| |||||||| || ||||||||||||||||||||    
T  13436509 acacatataattacactgaattatgtgatttccttaaattattagcagtgtcggc 13436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 19058861 - 19058959
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc-agtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| | ||||||| ||||||| ||| || || | ||||||||||| |||||||| |||| ||||| |||||||||| ||||| ||||||||||||    
T  19058861 ccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtccgtatccgtgcttcatag 19058959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 25452162 - 25452220
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||| ||||||| || ||||||||||||||||||||||||| |||||||| ||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtcggtgt 25452220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 1486714 - 1486779
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||||| ||||| || |||||||    
T  1486714 ccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 1486779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 5944337 - 5944257
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct--caaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||||| ||||||| ||||||||| |  |||||||||||| ||| |||| ||||||||| ||||||||||    
T  5944337 ccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgt 5944257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 36906048 - 36905955
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 115  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||| |||| ||  |||||||||   || | ||| |||||| ||||||||||    
T  36906048 acacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagtgtccttgacatgtccgtatttgtgcttcata 36905955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 48450592 - 48450689
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| | ||||||| || |||| ||| ||||| ||||||||||||| |||| ||| |||||||||  ||||||||| ||||| | ||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccgtatccatgcttcatag 48450689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 23636054 - 23636150
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 115  Q
    |||||||||| |||||| ||||||| ||| ||||||||||||| || || || ||||| ||||| |||  ||||||||| |||||  ||||||||||    
T  23636054 ccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgtgcgtatctgtgcttcata 23636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 38503374 - 38503318
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||||||||||| ||||| | | ||||||||||||||||||||| |||||||    
T  38503374 ccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcgg 38503318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 44482284 - 44482240
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  44482284 ccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 51410079 - 51409980
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct-caaattattagcagtgtcggcatgtcagtgtttgtgt-cgtgttcgtattcgtgcttcatag 116  Q
    ||||||| | ||||||| ||||||| ||||||||| | |||||||||||  ||||||||||||| || ||||||| ||||| ||||| ||||||||||||    
T  51410079 ccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggcatgtccgt-tttgtgtccgtgtccgtatccgtgcttcatag 51409981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 10577739 - 10577818
Alignment:
Q  18 cccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||||||| ||| ||| ||||||||||| |||  |||||| |||||||| |||| ||||  |||||||||    
T  10577739 cccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgt 10577818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 13997937 - 13997870
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||||||||| | |||| |||| | |||||||| |||||||||    
T  13997937 ccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgt 13997870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 20157355 - 20157410
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    ||||||||||| ||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  20157355 ccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcg 20157410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 25361938 - 25361883
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| ||  ||||||||    
T  25361938 gacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggc 25361883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 29229516 - 29229461
Alignment:
Q  19 ccgacacatataattacc-ctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||||||||||| || |||  |||||||||||||||||||||||||||||    
T  29229516 ccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgtc 29229461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 37598885 - 37598819
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||||  |||||||| |||||||||    
T  37598885 ccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 37598819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 38075975 - 38076030
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    ||||||||||| ||||| |||| || |||||||| |||||||||||||||||||||    
T  38075975 ccgacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcg 38076030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 113343 - 113289
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcag 83  Q
    ||||||| ||||||| ||||||||| ||||||||||||| |||||||| ||||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 3490396 - 3490462
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| | ||||||| ||||||  |||  ||||||||||||||||||||||||||| |||||||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgt 3490462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 5376505 - 5376583
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||| ||||||| ||||||||||| |||||||| ||| |||||  |||||||||    
T  5376505 ccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgt 5376583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 9828098 - 9828036
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||||||| |||||| ||||||| ||||||||| ||||||||||||  |||||||| ||||    
T  9828098 ccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 14332647 - 14332709
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||| |||||||||||| || |||| ||||||||||||||||||||||  |||| ||||||||    
T  14332647 ccgagacatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 17754363 - 17754289
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    |||||||||| |||| ||||||| ||| ||||| ||||||||||||| |||||||  |||||| || ||||||||    
T  17754363 gacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 17754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 34298482 - 34298412
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||| ||||||| ||||||||||||||||||||||  |||||||  ||||||| |  |||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgt 34298412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34371767 - 34371714
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||||| |||||    
T  34371767 ccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 34712390 - 34712440
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtg 71  Q
    ||||||||||||||| || |||| ||| |||||||||||||||||||||||    
T  34712390 gacacatataattacactaaattatgttattttctcaaattattagcagtg 34712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 38078666 - 38078740
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||||| | |||||||  |||||| ||||||||| ||||||||||||| |||||| | |||||||||| |||||    
T  38078666 ccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 41877475 - 41877553
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| || |||| ||| ||||||||||||||||||| |||||||| |  |||||| ||||||||||    
T  41877475 ccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgt 41877553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 10233305 - 10233260
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattag 66  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||    
T  10233305 gacacatataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 28273093 - 28273190
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| | ||||||| ||||||| | ||||||| |||||| |||||  ||||| ||||||||||||   |||| ||| ||||| ||||||||||||    
T  28273093 ccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtccttgtcatgtccgtatccgtgcttcatag 28273190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 39953151 - 39953208
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||||||| |||||| || |||| ||||||||||| ||||||||||| ||||||||    
T  39953151 ccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggc 39953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 1704997 - 1705053
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||| | ||||||||||||||| ||||||||| ||||||||||||  |||||||    
T  1704997 ccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcgg 1705053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 16927197 - 16927269
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 98  Q
    |||||||||| ||||||| | ||||||| |||||||||||||  || || | ||||||||| |||||||||||    
T  16927197 atataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgtt 16927269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 30847727 - 30847787
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||||| |||||  |||||| ||| ||||| ||||||||||||||||||| |||||||    
T  30847727 gacacatatgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtc 30847787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 609482 - 609541
Alignment:
Q  38 tgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| ||| ||||||||||||||||||  |||||||| ||||||||||  ||||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgt 609541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 6415006 - 6415073
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||| ||||||  ||| ||| |||||||||||||||| ||||||  ||||||| |||||||||    
T  6415006 ccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgt 6415073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 9690279 - 9690351
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||||||||| ||||| |||||||  ||||||||||||  |||||||| ||||| || ||||||||| ||||||    
T  9690279 ccgacacatatgattacactgaatt--gtgattttctcagtttattagcggtgtcagcgtgtcagtgtctgtgtc 9690351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 22881621 - 22881688
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| || |||| ||||||||| ||||||||||||  |||||||| |||||||||    
T  22881621 ccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 22881688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 42359454 - 42359521
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||  ||||| || |||||||||    
T  42359454 ccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgt 42359521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 46348388 - 46348455
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| || |||| | ||||||| ||||||||||||| |||||||| |||||||||    
T  46348388 ccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgt 46348455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 20999630 - 20999588
Alignment:
Q  51 tttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||    
T  20999630 tttctcaaattattatcagtgtcgacatatcagtgtttgtgtc 20999588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 25272536 - 25272458
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||||| || |||| ||||||||||||||||| ||| | |||||    |||| |||||||||||||||    
T  25272536 ccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtcaaagtgtctgtgtttgtgtcgtgt 25272458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 26238120 - 26238173
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||||||||| |||| ||||||| ||| ||||||||||||||||||| |||||||    
T  26238120 gacacatata-ttacactgaattatgttattttctcaaattattagcggtgtcgg 26238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 40285660 - 40285726
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||| | ||| ||||||| || |||||||||||||||||||| |||| ||  |||||||||    
T  40285660 cgacacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgt 40285726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 9629905 - 9630002
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| |||||| || ||||||| | ||||||| ||||||||||||| ||||||   |||| ||||   |||||||  ||||| ||||||||||||    
T  9629905 ccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtccatgtcgtggccgtatccgtgcttcatag 9630002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 10475000 - 10475045
Alignment:
Q  37 ctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||| |||||||||||||| |||||||| |||||||| |||||    
T  10475000 ctgaattatgtgattttctcaagttattagcggtgtcggcgtgtca 10475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 20131987 - 20132024
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  20131987 atataattaccctaaattatgtgattttctcaaattat 20132024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 23738729 - 23738676
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||||| ||||| | ||||||| ||||||||| ||||||||||||| |||||||    
T  23738729 acacatttaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 23738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 31672910 - 31672967
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| |||||||  |||||||| ||||||||||||| |||||||  |||||||||    
T  31672910 taattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgt 31672967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 29163386 - 29163454
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    ||||||||||||||||   |||||| ||||||||||  ||||| ||||| |||||||| |||| |||||    
T  29163386 ccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtctgtgtt 29163454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 30749894 - 30749858
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct 55  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  30749894 ccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 30771345 - 30771309
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct 55  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  30771345 ccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 35702629 - 35702691
Alignment:
Q  55 tcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcatag 116  Q
    ||||||||||||| ||||||||||||||||| | |||||  |||| ||||| ||||||||||||    
T  35702629 tcaaattattagctgtgtcggcatgtcagtg-tcgtgtccggtgtccgtatccgtgcttcatag 35702691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 40917779 - 40917727
Alignment:
Q  45 tgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||| ||||||||||||| |||||||| ||||||| |  |||||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgt 40917727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 7996383 - 7996450
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  7996383 ccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgt 7996450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 8022418 - 8022351
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  8022418 ccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgt 8022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 7265598 - 7265665
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| |||||||||    
T  7265598 ccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgt 7265665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 19040404 - 19040341
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  19040404 gacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 26562742 - 26562675
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||| |||||    
T  26562742 cgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgtt 26562675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 7086849 - 7086771
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||| || | |||| |||| ||||||||||    
T  7086849 ccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgt 7086771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 9025499 - 9025553
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  9025499 ccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 9027232 - 9027154
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||| | ||||| ||||||| ||||||||||||||| |||||||| |||||||||  |||||||||    
T  9027232 ccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 9027154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 9658933 - 9658855
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| |||||||||| ||||||| ||||||||||| ||||||||||| |||||||| |||||||||  |||||||||    
T  9658933 ccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt 9658855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 13364710 - 13364773
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||||||| ||||| ||||||| | ||||||||||||||||| ||||||||||||||||||    
T  13364710 ccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 13851789 - 13851710
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc 99  Q
    |||||||||||||||| |||||||  || ||||||||||||||||||| |||||| | |||||||||  |||||||||||    
T  13851789 cgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttc 13851710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 16833362 - 16833267
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcat 114  Q
    ||||||| | ||||||| ||||| | ||||||||| ||||||||||||  |||||||| ||||||||| |||||||||| |||||  |||||||||    
T  16833362 ccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccgtatcagtgcttcat 16833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 34073352 - 34073451
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc-gtattcgtgcttcataga 117  Q
    ||||| ||||||||||| ||||||| || ||||||||||||||||||||  ||| |||||||||||||  ||||||||| | || | |||||||||||||    
T  34073352 ccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgtgcttcataga 34073451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 10770679 - 10770776
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||  |||| ||| |||||||||   |||||||| ||||| ||||||||||||    
T  10770679 ccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccgtatccgtgcttcatag 10770776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 21924940 - 21924997
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    ||||||||||||||||| ||||||| | |||| |||||||||||||||||||||||||    
T  21924940 ccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggc 21924997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 34290091 - 34290156
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    |||||||| ||||||| ||||||| || |||||||||||  |||||||||||||||||||||||||    
T  34290091 ataattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtc 34290156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 1532290 - 1532211
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagc--agtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||||||||| ||||||| ||| ||||| |||||||||||||   |||||| | |||||||||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcg 1532211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 5732515 - 5732582
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| || || | ||||||||||||||||||||| | |||||||| |||||||||    
T  5732515 ccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgt 5732582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 9629437 - 9629374
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    |||||||||||||||||  |||||| |||||||||||||||||||| || |||||||| |||||    
T  9629437 ccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 16766751 - 16766684
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  16766751 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 16766684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 19044518 - 19044451
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||| || ||||||| |||||| |||||||||||||||  |||||||| |||||||||    
T  19044518 ccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgt 19044451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 33001294 - 33001357
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    |||||||||||||||||  | |||| ||||||||| |||||||||||||||||||||| |||||    
T  33001294 ccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 9107375 - 9107453
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||| |||||||| ||| |||||  |||||||||    
T  9107375 ccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 3398664 - 3398592
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||||| ||||||| | ||||||| ||||||||||||| |||||||| |||||||||  ||||||||||||    
T  3398664 tataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcg 3398592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 8805586 - 8805655
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||| || |||| ||||||||||||||||||||||||||| || | |||| |||| ||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgt 8805655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 10339132 - 10339209
Alignment:
Q  21 gacacatataattacc-ctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||| | ||||||| |||||||||||||||||| | || |||||||| ||||||||||  ||||||||    
T  10339132 gacacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgt 10339209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 18803549 - 18803594
Alignment:
Q  52 ttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||    
T  18803549 ttctcgaattattagcggtgtcggcatgtcagtgtttgtgtcgtgt 18803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||| ||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 1681811 - 1681731
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    |||||| | ||||||| |||||||  |||||||| ||||||||||||  |||||||| ||| ||||| |||||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcg 1681731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 7378033 - 7377977
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||||||||||||||||  |||||| ||||||||||||||||| ||||| |||||||    
T  7378033 ccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcgg 7377977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 8776988 - 8777056
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||||||||| ||||||||||||  |||||||| |||||||||  |||||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgt 8777056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 12696368 - 12696300
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||| ||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 12696300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 17341671 - 17341735
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtg 85  Q
    ||||| ||||||||| ||||||| ||||||||| ||||||||||| | |||||||| ||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 7723255 - 7723322
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||| |||||||||||  ||||||| | |||||||||||||||||||||||||||  | |||||||||    
T  7723255 ccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgt 7723322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 7938170 - 7938103
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||| || |||| | ||||||| ||||||||||||| |||||||| |||||||||    
T  7938170 ccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgt 7938103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 9195759 - 9195814
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    ||||||||||||||||| || |||| ||| |||||||||||||||||| |||||||    
T  9195759 ccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcg 9195814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 20371115 - 20371178
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    |||||||||||||| ||  ||| || ||||||||||||||||||||||| |||||||| |||||    
T  20371115 ccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtca 20371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 9617488 - 9617442
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattatta 65  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||    
T  9617488 ccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 10294161 - 10294083
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||||||  |||| | || |||| ||||||||||||||| || ||||||||||||| |  |||||||||    
T  10294161 ccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 10842585 - 10842519
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||| ||||| || |||| ||||||||| ||||||||||||| |||||||| |||| ||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgt 10842519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 13360377 - 13360455
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||| |||||||||||| ||||||| |||||||||||||||||| |||  |||||| | |||| ||||| || ||||||    
T  13360377 ccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgt 13360455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 30851654 - 30851599
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||||||||||||||  ||||||  |||||||||| ||||||||||||||||||||    
T  30851654 ccgacacatataattacattgaatt--gtgattttcttaaattattagcagtgtcggc 30851599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 31959213 - 31959139
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||||| | ||||||| ||| ||| ||||||||| ||||||||||||| ||| |||| |||||||||| |||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtc 31959139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 34595188 - 34595110
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||  |||||||| ||||| |||  |||||||||    
T  34595188 ccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgt 34595110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 677863 - 677818
Alignment:
Q  47 tgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt 92  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||    
T  677863 tgattttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 6665267 - 6665210
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||||| |||||||| ||||||| |||||||| |||||||||||||| || |||||    
T  6665267 ccgacacaaataattactctgaattatgtgatttactcaaattattagcggtttcggc 6665210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 7977835 - 7977900
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    ||||||| | ||||||| ||||||| ||| ||||| ||||||||||||| |||||||| |||||||    
T  7977835 ccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaatt 61  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 17841604 - 17841661
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| || |||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 17841661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7248409 - 7248365
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattag 66  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||    
T  7248409 acacatataattaccctgaattatgtgatttcctcagattattag 7248365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 7801161 - 7801229
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||  |||||||| ||| ||||||    
T  7801161 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgtt 7801229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 8931608 - 8931664
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||||||||||||  ||||||| ||| ||||||||||||| ||||| ||||||||    
T  8931608 cgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggc 8931664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 20370515 - 20370585
Alignment:
Q  49 attttctcaaattattagcagtgtcggcatgtcagtgt---ttgtgt-cgtgttcgtattcgtgcttcata 115  Q
    ||||||||||||||||||||| ||||||||||| ||||   | |||| ||||| |||||||||||||||||    
T  20370515 attttctcaaattattagcagagtcggcatgtcggtgtctatagtgtccgtgtccgtattcgtgcttcata 20370585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 26178686 - 26178749
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||||||| ||||| || |||| ||||||||| |||||||||||| |||| |||| |||||    
T  26178686 ccgacacatatgattacactaaattatgtgattttatcaaattattagaagtgacggcttgtca 26178749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 28152152 - 28152086
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| ||||||| ||||||||| |||||||||||||  ||||||| |||||||||    
T  28152152 ccgacacttgtaattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgt 28152086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 31579212 - 31579276
Alignment:
Q  5 gacatgtgtcgtgcccgacac----atataattaccctgaattctgtgattttctcaaattatta 65  Q
    ||||||||||||| |||||||    | |||||||| ||||||| |||||||||||||||||||||    
T  31579212 gacatgtgtcgtgtccgacaccgacacataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 32511674 - 32511725
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||| ||||||||| ||||||| ||||||||||| ||||||||||| |||||    
T  32511674 acacttataattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 32839660 - 32839727
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    |||||||  ||| ||| ||||||||||||||||||||| ||||||| |||||||  ||| ||||||||    
T  32839660 ataattatactggattatgtgattttctcaaattattaacagtgtcagcatgtcgatgtctgtgtcgt 32839727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 426519 - 426597
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | |||||||  | |||| ||||||||| ||||||||||| | |||||||| |||||||||  |||||||||    
T  426519 ccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 426597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 8365524 - 8365602
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| | ||||| |||||| || ||||||||||||  |||||||| |||||||||  |||||||||    
T  8365524 ccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgt 8365602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 16488595 - 16488657
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||||||||||||| ||| ||| ||||||||||| |||  |||||| |||||||| ||||    
T  16488595 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 16488657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 18367890 - 18367828
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||||||||||||| ||| ||| ||||||||||| |||  |||||| |||||||| ||||    
T  18367890 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 24833243 - 24833305
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||| || |||| || |||||||| || ||||||| ||||||||| |||||||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttattagtagtgtcggcgtgtcagtgt 24833305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 32298615 - 32298677
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    |||||||||||||| || |||| ||||||  ||| ||||||||||| |||| |||||||||||    
T  32298615 acacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagt 32298677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 34172247 - 34172170
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||||    | |||| ||||||||||||||||| ||||  ||||||||||||||||  |||||||||||    
T  34172247 ccgacacatataattttaattaattatgtgattttctcaaattgttagaggtgtcggcatgtcagt-attgtgtcgtgt 34172170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 32299329 - 32299256
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgt 92  Q
    ||||||| ||||| |||  |||||| ||||||||||||||||||||| ||| || ||  ||||||| |||||||    
T  32299329 ccgacacgtataactacattgaattatgtgattttctcaaattattatcagggttggtgtgtcagtatttgtgt 32299256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 1191706 - 1191762
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||| | ||||||| ||||||| ||||| ||| ||||||||||||| ||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggc 1191762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7151463 - 7151419
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattag 66  Q
    |||||||||||||| || |||| ||||||||| ||||||||||||    
T  7151463 acacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 11784221 - 11784297
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    |||||| |||||||||| |||| |  |||||||||||||||||||||   |||| ||| |||| |||| ||||||||    
T  11784221 ccgacatatataattacactgattcatgtgattttctcaaattattatatgtgtgggcgtgtcggtgtctgtgtcgt 11784297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 12686408 - 12686455
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||| ||||||  ||||||||||| |||||||||||||||||||    
T  12686408 tataattacactgaata-tgtgattttcttaaattattagcagtgtcgg 12686455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 8e-20; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26492186 - 26492307
Alignment:
Q  1 gtcagacatgtgtcgtgcccgacac--ata----taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcg 94  Q
    ||||||||||||||||| |||||||  |||    ||||||| ||||||| | ||||||| |||||||||||||  ||||||| |||||||||  ||||||    
T  26492186 gtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcg 26492285  T
Q  95 tgttcgtattcgtgcttcatag 116  Q
    ||| ||||||||||||||||||    
T  26492286 tgtccgtattcgtgcttcatag 26492307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 25093556 - 25093478
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||| |||||||||| ||| |||||  |||||||||    
T  25093556 ccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgt 25093478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 32804529 - 32804608
Alignment:
Q  5 gacatgtgtcgtgcccga--cacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||||||||| ||||  ||||||||||||| || |||| ||||||||||||||||||||| | ||||||||||||||    
T  32804529 gacatgtgtcgtgtccgagacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 8383311 - 8383233
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||||| ||||||| | ||||||||||||||||||||| |||||||| ||||| |||  |||||||||    
T  8383311 ccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgt 8383233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 11313808 - 11313861
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 26508164 - 26508067
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||| ||||| || ||||||| | ||| |||||| ||||| ||| ||||||||    
T  26508164 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccgtatccgttcttcatag 26508067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 7928504 - 7928448
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||    
T  7928504 ccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 25948895 - 25948959
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||| ||||||||| ||||||| ||||||||| ||||||||||||| || |||||||||||||||    
T  25948895 acacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgt 25948959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 8789555 - 8789652
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcata 115  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||| ||| |||||||  |||| ||| |||||||  |||| ||||| |||||||||||    
T  8789555 ccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgtctgtg-ttgtgtccggtgtccgtatccgtgcttcata 8789652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 28678357 - 28678278
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 98  Q
    |||||||||| |||||  || |||| ||||||||| | ||||||||||||| |||||||||||||||| | |||||||||    
T  28678357 ccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgtctatgtcgtgtt 28678278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 4987306 - 4987364
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    ||||||| ||||||| ||||||||| ||||||||||||| |||||||| ||||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtt 4987364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 11665998 - 11665920
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||| || |||| ||||||||| |||||||||||||  ||||||  ||| ||||| ||||||||||    
T  11665998 ccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgt 11665920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 14829743 - 14829670
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||| |||||||| ||||||||| ||||||    
T  14829743 ccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 14979224 - 14979138
Alignment:
Q  30 aattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    |||||| ||||||| ||||||||| ||||||||||||| |||||||| || || |||   |||||||| ||||| ||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccgtatccgtgcttcatag 14979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 30994895 - 30994965
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||   | ||||| ||||||||||||||    
T  30994895 tataattacactgaattgtgtgattttcttaaattattagcagtgtgaacgtgtcaatgtttgtgtcgtgt 30994965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 21479162 - 21479105
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 21479105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 24205047 - 24205124
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| ||||||||| ||| ||| ||| ||||||||||||||||| | |||||||| |||||||||  |||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgt 24205124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 2731863 - 2731790
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||| || |||| ||||||||||| ||| |||||  ||| ||||||||||||||| ||||||||||    
T  2731863 acacatataattacacttaattatgtgattttcttaaagtatta--agtatcggcatgtcagtgtatgtgtcgtgt 2731790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 9624689 - 9624641
Alignment:
Q  25 catataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||||  |||||| |||||||||||||||||||||||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtc 9624641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 10954994 - 10954911
Alignment:
Q  31 attaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttc 112  Q
    ||||| ||||||| ||||||||| ||||||||||||  |||||||| |||||||||| |||||  |||| ||||| ||||||||    
T  10954994 attacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccggtgtccgtatccgtgcttc 10954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 5441055 - 5441114
Alignment:
Q  38 tgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| ||||||||||||||||| ||||| ||| |||| ||||||||| ||||||||||    
T  5441055 tgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgt 5441114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 8039840 - 8039903
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||||||||||||| ||||||| | | ||||||||||||||||||| |||| ||| |||||    
T  8039840 ccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 9800094 - 9800016
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| || |||||| | ||||| ||| ||||||||||||||||||  |||||||| |||||||||  |||||||||    
T  9800094 ccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgt 9800016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 10690267 - 10690321
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||| |||||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  10690267 ccgacaaatataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 28918055 - 28917977
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||||||||| |||||||||||||  ||||||| ||||||| |  |||||||||    
T  28918055 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgt 28917977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 49505161 - 49505207
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||||||||||| || |||| |||||||||||||||||||||||    
T  49505161 gacacatataattacactaaattatgtgattttctcaaattattagc 49505207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 49651791 - 49651853
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||| | |||||||  |||||| ||||||||| ||||||||||||| |||||||||||||    
T  49651791 ccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 4990972 - 4991053
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||| | ||||||| ||||||| ||| ||||||||||| ||||||| |||||||  ||||||| |  ||||||||||||    
T  4990972 ccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcg 4991053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 11252023 - 11251978
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||    
T  11252023 ataattacactgaattatgtgattttctcaaattattagcaatgtc 11251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 11658868 - 11658791
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||| || ||||||| || |||||||||||||||||| |  ||| ||  ||||||||| ||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgt 11658791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 12704056 - 12703999
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||||||||| ||||||| |||| |||||||||||||||||  |||||||| ||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 16000021 - 16000102
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||| | || |||| ||||||| ||| ||||| | ||||||||||  |||||||| ||||||||| |||||||||||||    
T  16000021 ccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcg 16000102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 16192758 - 16192811
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||| | |||||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattattaacggtgtcgg 16192811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 27277852 - 27277897
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||| || |||| |||||||||||||||||||||||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 34307786 - 34307839
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||| ||||||||| ||||| | ||||||||||||||||||||||| |||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtc 34307839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 45451607 - 45451554
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    ||||||||||| ||||  ||||| | ||||||||||||||||||||||||||||    
T  45451607 ccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgt 45451554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 6525712 - 6525752
Alignment:
Q  46 gtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  6525712 gtgattttctcaaattattagcggtgtcgacatgtcagtgt 6525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 20691373 - 20691305
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    ||||||||||| ||||| ||||||| ||| ||||||||||||||||| |||| ||  | ||||||||||    
T  20691373 ccgacacatatgattacactgaattatgtcattttctcaaattattatcagtttctacgtgtcagtgtt 20691305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 40052367 - 40052319
Alignment:
Q  38 tgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 40052319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 1438853 - 1438765
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcatagaa 118  Q
    |||||||||||  ||||||| ||||||||||||||||| |||||  ||||||  |||||      ||||||||| | ||||||||||||||||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtca------gtgtcgtgtccatattcgtgcttcatagaa 1438765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 10455841 - 10455766
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||| || | || | ||||||||||| |||||||||||||| ||| ||||| ||  ||||||||||    
T  10455841 acacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtcgtgt 10455766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 13620771 - 13620834
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    ||||||||||| | | ||||||  |||||||||||||||||| |||| |||||| |||||||||    
T  13620771 gacacatataactgcactgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagt 13620834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 24633800 - 24633757
Alignment:
Q  39 gaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||    
T  24633800 gaattatgtgattttctcaaattattagtggtgtcggcatgtca 24633757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 34185128 - 34185191
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||| | ||||||| ||||||| ||||||||| | ||||||||||| |||||||| |||||    
T  34185128 ccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtca 34185191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 38731272 - 38731205
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||| ||| ||||||| ||||||||| | ||||||||||| || ||| |||||| ||||    
T  38731272 ccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgt 38731205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 5407260 - 5407314
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||||||  |||||| ||||||||||||||||| ||||| |||||||| ||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgtc 5407314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 12674534 - 12674584
Alignment:
Q  47 tgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||||||||||||||||||  ||||| |||  |||||||||    
T  12674534 tgattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgt 12674584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 25211593 - 25211539
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||||||||||||| || || | |||||| |||||||||||| |||||||||    
T  25211593 ccgacacatataattacacttaactgtgtgatattctcaaattatcagcagtgtc 25211539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 29508497 - 29508451
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattag 66  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 35994744 - 35994805
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    |||||| | ||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||    
T  35994744 cgacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtca 35994805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 1830396 - 1830335
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||| ||| ||||| ||||||| ||| ||||||| |||||||||  ||||||||||||||    
T  1830396 cgacacctatgattacactgaattatgtcattttcttaaattattaaaagtgtcggcatgtc 1830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 10268501 - 10268558
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| || |||| ||||||||| ||||||||||| | |||||||| |||||||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgt 10268558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 11493372 - 11493413
Alignment:
Q  25 catataattaccctgaattctgtgattttctcaaattattag 66  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattag 11493413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 15812832 - 15812893
Alignment:
Q  25 catataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||| |||| || |||||||||||||||||||| || | ||| ||||| ||||||    
T  15812832 catataattacactgagttatgtgattttctcaaattatttgcggcgtcagcatgccagtgt 15812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 26290423 - 26290358
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||  | ||| | |||||||||||||||||||||   |||||||| |||||||||    
T  26290423 gacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcggcgtgtcagtgt 26290358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 7614420 - 7614476
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||||| |||||||||  ||||||| ||||||||||| ||||||||| | |||||||    
T  7614420 ccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcgg 7614476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 14028061 - 14028005
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||||||||||| ||| ||| ||||||||||| |||  |||||| |||||||    
T  14028061 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcgg 14028005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 15796309 - 15796377
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| | ||||||| ||||||||||| | |||||||| ||||| |||  |||||||||    
T  15796309 taattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgt 15796377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 21720807 - 21720751
Alignment:
Q  30 aattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| ||||||| || ||| |||||||||||||| | |||||||| |||||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgt 21720751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 34910361 - 34910309
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||| ||||||| ||||||||| ||||||||||||  |||||||| ||||    
T  34910361 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 40993340 - 40993396
Alignment:
Q  19 ccgacacatataattaccctgaattctgtga-ttttctcaaattattagcagtgtcg 74  Q
    ||||||||||||||||| ||||||| ||||| |||| | ||||||||||| ||||||    
T  40993340 ccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtcg 40993396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 55401129 - 55401053
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||| | ||||||| || |||| ||||||||| ||||||||||||  |||||||| | |||||||  |||||||    
T  55401129 ccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgt 55401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 13844601 - 13844668
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||||||||||||| |||| ||||    
T  13844601 ccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgt 13844668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 29776085 - 29775994
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 115  Q
    |||||||||||  |||||||  ||||||||||||||||||||||||||||| | ||||| |||  ||||||||  |||||||||||||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtgaccgtattcgtgcttcata 29775994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 24362209 - 24362283
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||| |||| |||| ||||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgt 24362283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 31236582 - 31236644
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||| ||||    
T  31236582 ccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 20873123 - 20873027
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 115  Q
    ||||||| | ||||||| || |||| ||||||||| ||||||||||| |  ||||||| |||||||||  ||||||||| |||||||||||||||||    
T  20873123 ccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccgtattcgtgcttcata 20873027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 27213601 - 27213539
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||| ||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtc 27213539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 34897138 - 34897084
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  34897138 cgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 34897084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 11927091 - 11927148
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  11927091 ccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggc 11927148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 11803310 - 11803234
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 98  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| ||||||| |  | |||||||| ||||||||||    
T  11803310 acacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgtt 11803234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 4786343 - 4786410
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||   |||||||| |||||||||    
T  4786343 ccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgt 4786410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 12606834 - 12606889
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    |||||||||||||||||  |||||| | ||||||||||||||||||||||||||||    
T  12606834 ccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 14731763 - 14731712
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 20679400 - 20679467
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||| ||||| | ||||||||||||||||||||||  |||||| |||||||||||    
T  20679400 ccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgt 20679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 39954288 - 39954351
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||| || |||| ||||||||||||||||||||||| |||||||| |||| ||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgt 39954351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 29510309 - 29510387
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||  ||||||| ||||||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  29510309 ccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 11944719 - 11944662
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    ||||||||||||||||| |||| || ||||||||| ||||||||||| ||||||||||    
T  11944719 ccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggc 11944662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 36450769 - 36450826
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||||||||||| ||||||||||||  |||||||| |||||||||    
T  36450769 taattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 36450826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 4611588 - 4611532
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||| |||||||||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  4611588 ccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 4673440 - 4673508
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| | ||||||| ||||||||||| | |||||||| ||||||||| ||||||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgt 4673508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 28384999 - 28385079
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc 99  Q
    ||||||||||||||||| ||||||| || |||||  ||| ||||||| | ||||||| ||||||||||  |||||||||||    
T  28384999 ccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgttc 28385079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 3025603 - 3025556
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagca 68  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  3025603 gacacctataattacactgaattatgtgattttctcaaattattagca 3025556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 13436981 - 13437036
Alignment:
Q  31 attaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| |||||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  13436981 attaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 13437036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 14134753 - 14134706
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattag 66  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  14134753 ccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 15816134 - 15816201
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||| || |||| ||||||||| ||||||||||||  |||||||| |||||||||    
T  15816134 ccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 15816201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 22596038 - 22595949
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcataga 117  Q
    ||||||| ||||||| ||| ||||| | ||||||||||| |||||||| |||||||| |||||||  |||| ||||| |||||||||||||    
T  22596038 taattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtg-ttgtgtccggtgtccgtatccgtgcttcataga 22595949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 22652011 - 22651952
Alignment:
Q  38 tgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| ||||||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  22652011 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 926793 - 926871
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||||| |||||   || ||||||||||||||||||| ||||| ||| |||||||||  |||||||||    
T  926793 ccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgt 926871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 24669487 - 24669409
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||| ||||||| ||| |||| |||||||||||| | ||||| || ||||||||| ||||||||||    
T  24669487 ccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgt 24669409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 37283824 - 37283882
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||| ||||||| ||||||||||||| ||||||||| ||| | ||||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgt 37283882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 40332245 - 40332191
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||||| ||||||||    
T  40332245 ccgacacttgtaattacactgaattatgtgattttctcaaattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 44067569 - 44067503
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| ||||||||| ||| ||| ||| ||||||||||||||||| | |||||||| |||||||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 44067503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 7658517 - 7658460
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||| |||||||||| ||||||| ||| ||||||||||||||||||  ||||||||    
T  7658517 ccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggc 7658460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 12570514 - 12570567
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||||||||| || |||| |||| |||||| |||||||||||||||||    
T  12570514 cgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtc 12570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 31109525 - 31109590
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||| |||  ||||||| | ||||||||||||||||||| | |||||||| |||||||||    
T  31109525 gacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgt 31109590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 36934721 - 36934645
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgtt 98  Q
    ||||||||||||||  |||||| ||||||||| || |||||||||| |||||| | ||| |||||  ||||||||||    
T  36934721 acacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtt 36934645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 13203688 - 13203617
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||| ||||||| ||| ||||||||||||||||||   ||| | | | ||||||||||||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgt 13203617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 25192352 - 25192419
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||  ||||||| ||| | ||| ||||||||||||| |||||||| |||||||||    
T  25192352 ccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgt 25192419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 41831958 - 41832013
Alignment:
Q  32 ttaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    |||| ||||||| ||||||||| ||||||||||| | ||||||||||||| |||||    
T  41831958 ttacactgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgtt 41832013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 12985446 - 12985368
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| |||| |||||  |||||| |||||||||||||||||||||   ||||| |||| ||| |||||||| |||||    
T  12985446 ccgacatatatgattacattgaattatgtgattttctcaaattattataggtgtctgcatctcactgtttgtgccgtgt 12985368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 18407772 - 18407706
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||| | ||||||| ||||||| ||||||||| |  |||||||||| ||||||||||||| ||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgt 18407706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 25566895 - 25566841
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||| |||||    
T  25566895 ccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 27067323 - 27067403
Alignment:
Q  39 gaattctgtgattttctcaaattattagcagtgtcggca---tgtcagtgtttgtgtcgtgttcgtattcgtgcttcatag 116  Q
    ||||| ||| |||||||||||| |||||  |||||||||   ||||||||  |||||||||| ||||| ||||||||||||    
T  27067323 gaattatgtaattttctcaaatcattagtggtgtcggcagtgtgtcagtgactgtgtcgtgtccgtatccgtgcttcatag 27067403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 33382024 - 33382070
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattatta 65  Q
    ||||||||||||||||| ||||||| ||| ||||||| |||||||||    
T  33382024 ccgacacatataattactctgaattatgtcattttcttaaattatta 33382070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 33405389 - 33405435
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattatta 65  Q
    ||||||||||||||||| || |||| |||| ||||||||||||||||    
T  33405389 ccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 34223001 - 34222924
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||| || |||| ||||||||| | |||||||||||  ||| ||| |||| ||||| |||||||||    
T  34223001 ccgacacatataattacacttaattatgtgattttattaaattattagcgatgttggc-tgtcggtgttcgtgtcgtgt 34222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 20785472 - 20785529
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcat 78  Q
    |||||||||||||||  | |||| |||||||| |||||||||||||| |||| |||||    
T  20785472 gacacatataattacattaaattatgtgatttcctcaaattattagcggtgttggcat 20785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 24413566 - 24413643
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctc-aaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||| ||||||||||||||||| |||  ||||||| ||||||||| | ||||| | ||||||||||  |||||||||    
T  24413566 gacacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgt 24413643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 24447076 - 24447039
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattat 24447039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 25172703 - 25172768
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagt 84  Q
    |||||||||||||||||  | || | ||| ||||| ||||||||||||||||||| |||| |||||    
T  25172703 ccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagt 25172768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 26529788 - 26529751
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  26529788 atataattaccctaaattatgtgattttctcaaattat 26529751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 30133201 - 30133160
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||||||| |||| ||| |||||||||||||||    
T  30133201 acacatataattaccctcaattatgttattttctcaaattat 30133160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 18067957 - 18067993
Alignment:
Q  37 ctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  18067957 ctgaattatgtgattttctcaaattattagcggtgtc 18067993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 22197757 - 22197825
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| || |||| ||||| ||| ||||||||||||| |||| ||| ||| ||||| ||||||||||    
T  22197757 taattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgt 22197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 26902180 - 26902216
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct 55  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  26902180 ccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 31557040 - 31556985
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtg 85  Q
    ||||||| ||||||| ||||||||| ||||||||||| | |||||||| ||||||||    
T  31557040 taattacactgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 40613516 - 40613441
Alignment:
Q  7 catgtgtcgtgcccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||||| |||||    
T  40613516 catgtgttgtgtccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 21945557 - 21945458
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc-gtattcgtgcttcataga 117  Q
    ||||||| | ||||||| ||||||| ||| ||||| ||||||||||||| |||||||||||||||||| |||||| ||| | || | |||||||||||||    
T  21945557 ccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtgcttcataga 21945458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 14126118 - 14126194
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||| ||||||||| ||||||| ||||| ||| ||||||||||| |||||||||| ||| ||||| ||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgt 14126194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 15029816 - 15029752
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||| ||||||| |||||| || ||||||||||||||||||| || |||||||||    
T  15029816 acacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgt 15029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 36635375 - 36635311
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||  |||| ||| |||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgt 36635311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 35723391 - 35723457
Alignment:
Q  21 gacacatataattaccctgaattctgtg-attttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||||  |||||| |||| ||||||||||||||||||| |||||||| |||||||||    
T  35723391 gacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt 35723457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 3947781 - 3947849
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| || |||||| ||||||||||||| ||||||||||||| |||| ||||| ||||    
T  3947781 taattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgt 3947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 8423731 - 8423779
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 13134503 - 13134447
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    |||||||||||||||| || |||| ||||||||||| ||||||| ||||||||||||    
T  13134503 cgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggc 13134447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 13783331 - 13783268
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||| ||||||| |||||| ||||||||| |||||| |||||||  |||||||||    
T  13783331 cacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgt 13783268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 22440609 - 22440660
Alignment:
Q  23 cacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| | ||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 26504304 - 26504359
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    ||||||||||||||||| ||||| | | ||||||||| ||||||||||||||||||    
T  26504304 ccgacacatataattacactgaactatttgattttcttaaattattagcagtgtcg 26504359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 49431080 - 49430981
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct-caaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcataga 117  Q
    ||||||| | ||||||| ||||||| ||||||||| | |||||||||||| |||||||| ||||| |||  | ||||||| ||| | |||||||||||||    
T  49431080 ccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccgtgtccgtgcttcataga 49430981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 903971 - 903909
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||| ||||||| ||||||||||||||||||||| | ||| |||  |||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgt 903909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 5775363 - 5775409
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattatta 65  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||    
T  5775363 ccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 5832727 - 5832777
Alignment:
Q  47 tgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||||||||||||||||||||||||| | ||| | ||||||||||||||    
T  5832727 tgattttctcaaattattagcagtgtcgacgtgttaatgtttgtgtcgtgt 5832777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 15659768 - 15659818
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    |||||||||||||| | ||||| || |||||||||||||||||||||||||    
T  15659768 acacatataattacaccgaattatgagattttctcaaattattagcagtgt 15659818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 16402224 - 16402294
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||| ||| ||  ||| ||||||||||||||||| | |||||||||||||||||||  ||||||||    
T  16402224 tataattacactgtatcatgttattttctcaaattattatccgtgtcggcatgtcagtgttcatgtcgtgt 16402294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 23292991 - 23293069
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||||  ||||||| ||||||||| ||||||||||||| |||||||| ||||| |||  |||||||||    
T  23292991 ccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgt 23293069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 28720894 - 28720852
Alignment:
Q  55 tcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgt 28720852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 16189763 - 16189710
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    |||||||| |||||||| ||||||| ||||||||||||||||| ||||| ||||    
T  16189763 ccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 20743286 - 20743351
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    |||| ||| ||||| ||||||| ||| ||||||||||||||||| | |||||||| ||||||||||    
T  20743286 acacctatgattacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtt 20743351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 21539879 - 21539976
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt-----ttgtgt-cgtgttcgtattcgtgcttcataga 117  Q
    |||||||||| || |||| | ||||||||| |||||||||   ||||||||||||||||||     |||||| ||||||||||| |||||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtctatgttgtgtccgtgttcgtatacgtgcttcataga 21539976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 24343560 - 24343499
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||| ||||||||| ||||||| ||| ||||||||||||||||| | |||||||| ||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtc 24343499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 56257978 - 56257933
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 9996894 - 9996838
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    |||| |||||||||||  ||||||| ||||||||||||||||||||  |||||||||    
T  9996894 ccgagacatataattatactgaattatgtgattttctcaaattattgtcagtgtcgg 9996838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 12797343 - 12797438
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgtgcttcata 115  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||   || |||| |||||||||  ||||||| | ||||| |||||||||||    
T  12797343 ccgacacttgtaattacactgaattatgtgatttt-tcaaattattagttttgccggcgtgtcagtgtccgtgtcgtatccgtatccgtgcttcata 12797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 18576045 - 18576093
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagt 70  Q
    |||||||||||||| | ||||| ||||||||||||||||||| ||||||    
T  18576045 acacatataattacaccgaattatgtgattttctcaaattatcagcagt 18576093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 19482712 - 19482644
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| | ||||| |||||| || ||||||||||||  |||||||| ||||||||| ||||||||||    
T  19482712 taattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 19482644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 56488517 - 56488569
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||||| ||||||||||||| | ||||||||||||||| ||||| |||||    
T  56488517 gacacatatgattaccctgaattatatgattttctcaaattgttagcggtgtc 56488569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 847986 - 847927
Alignment:
Q  38 tgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| ||| ||||||||||||||||||| |  ||||| ||||||||| ||||||||||    
T  847986 tgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgt 847927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 31638068 - 31638119
Alignment:
Q  50 ttttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgt 101  Q
    ||||||||||||||||||   |||||||| ||||| ||||||||||||||||    
T  31638068 ttttctcaaattattagcgtcgtcggcatatcagtatttgtgtcgtgttcgt 31638119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 32910596 - 32910537
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    |||||||| ||||||| ||| ||||||||||||||||| | ||||||| ||||| |||||    
T  32910596 ataattacactgaattatgtcattttctcaaattattatccgtgtcggtatgtcggtgtt 32910537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 54580028 - 54580075
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattag 66  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||||    
T  54580028 ccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 1747258 - 1747200
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtg 85  Q
    ||||||||  ||||||| |||||||||||||| |||||||| |||||||| ||| ||||    
T  1747258 tataattaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtg 1747200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 5414177 - 5414255
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||| |||||||||||| ||| ||| ||||||||||| |||  |||||| |||||||| |||| ||||  |||||||||    
T  5414177 ccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgt 5414255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 7970568 - 7970501
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc 93  Q
    |||||||||||| ||||||| | ||||||||||  |||||| || ||||| |||||||||||| ||||||    
T  7970568 acatataattacactgaattatatgattttctc--attattggcggtgtcagcatgtcagtgtctgtgtc 7970501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 18743909 - 18743867
Alignment:
Q  44 ctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||| ||||||||||| || |||||||||||||||||    
T  18743909 ctgtgattttatcaaattattaacaatgtcggcatgtcagtgt 18743867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 40481680 - 40481603
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgt 107  Q
    ||||||| ||||||| ||||||||| ||||||||||||  || ||||| |||||||||  ||||||||| ||| |||||    
T  40481680 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccgtgttcgt 40481603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 3731250 - 3731213
Alignment:
Q  26 atataattaccctgaattctgtgattttctcaaattat 63  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  3731250 atataattaccctaaattatgtgattttctcaaattat 3731213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 4672090 - 4672147
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    ||||||||||||  ||| ||||||| ||| |||||| |||||||||||| ||||||||    
T  4672090 ccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcggc 4672147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 12628617 - 12628674
Alignment:
Q  46 gtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtat 103  Q
    |||||||| ||||||||||| | ||||||||||||||||||  ||||| ||| |||||    
T  12628617 gtgattttttcaaattattaactgtgtcggcatgtcagtgtcagtgtcatgtccgtat 12628674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 17425403 - 17425456
Alignment:
Q  28 ataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    |||||||| ||||||| || ||||||||||||||||||| ||||| || |||||    
T  17425403 ataattacactgaattatgcgattttctcaaattattaggagtgttggtatgtc 17425456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 29205498 - 29205445
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgt 72  Q
    ||||||| | ||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  29205498 ccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 35952627 - 35952684
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||||||||  |||||| | ||||||| ||||||||||||||||| |||| ||||    
T  35952627 acatataattacattgaattatatgattttatcaaattattagcagtggcggcgtgtc 35952684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 41601670 - 41601707
Alignment:
Q  45 tgtgattttctcaaattattagcagtgtcggcatgtca 82  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  41601670 tgtgattttatcaaattattatcagtgtcggcatgtca 41601707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 3712516 - 3712568
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||||||||  ||||||   ||||||||||||||||||||| |||||    
T  3712516 gacacatataattacattgaattacatgattttctcaaattattagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 7214511 - 7214574
Alignment:
Q  5 gacatgtgtcgtgcc--cgacacatataattaccctgaattctgtgattttctcaaattattag 66  Q
    ||||||||||||| |  |||| |||||||||||  | |||| ||||||||||||||||||||||    
T  7214511 gacatgtgtcgtgacaccgacgcatataattacattaaattatgtgattttctcaaattattag 7214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 7670733 - 7670681
Alignment:
Q  24 acatataattaccctgaattctgtgattttctcaaattattagcagtgtcggc 76  Q
    ||||||| |||  ||||||| ||||||||||||||| |||||||| |||||||    
T  7670733 acatatagttatactgaattatgtgattttctcaaactattagcaatgtcggc 7670681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 12895279 - 12895355
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||||| ||||||||| |  |||| ||||||||| |||||||||||   |||||||| ||||| |||| |||||||    
T  12895279 ccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgt 12895355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 17345451 - 17345487
Alignment:
Q  50 ttttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    |||||||||||||||||| |||||||| |||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagtgt 17345487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 30299001 - 30298933
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct-caaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| ||||||| ||| ||||| | |||||||||||| |||||||| |||||||||    
T  30299001 ccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgt 30298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 30327869 - 30327801
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttct-caaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||||| ||||||| ||| ||||| | |||||||||||| |||||||| |||||||||    
T  30327869 ccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgt 30327801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 30982883 - 30982931
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||| ||||||||| ||||| | |||||||||||||||| ||||||    
T  30982883 ccgacacttataattacactgaaatatgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 33950190 - 33950142
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagc 67  Q
    ||||||||||| |||||  | |||| |||||||||||||||||||||||    
T  33950190 ccgacacatatgattacattaaattatgtgattttctcaaattattagc 33950142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 35161082 - 35161034
Alignment:
Q  27 tataattaccctgaattctgtgattttctcaaattattagcagtgtcgg 75  Q
    ||||||||| ||||||| |||||||||||  ||||| ||||||||||||    
T  35161082 tataattacactgaattatgtgattttcttgaattagtagcagtgtcgg 35161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 38148741 - 38148785
Alignment:
Q  30 aattaccctgaattctgtgattttctcaaattattagcagtgtcg 74  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcggtgtcg 38148785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 135317 - 135398
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||  |||  |||| |||||||| ||||    
T  135317 ccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgtattcg 135398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 263379 - 263453
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    ||||| ||||||||| ||||||| |||| ||||||||||||||||||||||| | |||||||||||  |||||||    
T  263379 gacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgt 263453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 467 - 548
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcg 100  Q
    ||||||| | ||||||| ||||||| ||||||||| |||||||||||||||||||||| | |||||||  ||| ||||||||    
T  467 ccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcg 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 9752 - 9819
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||  | ||||||||||| ||||    
T  9752 ccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtctgtgt 9819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 21097 - 21019
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||||||||||||  | || || ||||||||||||||||||||| | ||||| ||||||||||||  |||||||||    
T  21097 ccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgt 21019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 44530 - 44584
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||||| |||||    
T  44530 ccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 51855 - 51798
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 51798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 92851 - 92794
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||| ||| ||||||||||||||||||| |||||||| |||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgt 92794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 20216 - 20148
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||||||||| ||||||||||||| |||||||| ||||| |||  |||||||||    
T  20216 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgt 20148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 53234 - 53170
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcag 83  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||| || || ||||| ||||||    
T  53234 ccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 241648 - 241549
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttc-gtattcgtgcttcataga 117  Q
    |||||||  |||||||| || |||| |||||||||  |||||||||||| |||||||| |||||||||  ||||||||| | || | |||||||||||||    
T  241648 ccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgcttcataga 241549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 1087 - 1013
Alignment:
Q  21 gacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgt 95  Q
    |||||||||| |||| ||||||| ||| ||||| ||||||||||||| |||||||  |||||| || ||||||||    
T  1087 gacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 1013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 70332 - 70238
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtg-tcgtgttcgtattcgtgcttc 112  Q
    ||||||| ||||||||| ||||||| ||| ||||| ||||||||||| | |||||| |||||| |||| |||| | |||| ||||| ||||||||    
T  70332 ccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgtttgtgtccgtatccgtgcttc 70238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 13436 - 13387
Alignment:
Q  37 ctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  13436 ctgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgt 13387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 21891 - 21940
Alignment:
Q  37 ctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  21891 ctgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgt 21940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 90896 - 90819
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||| |||||||||| ||||||| | |||||||||||||||||||   |||| ||  ||||||||| ||||||||||    
T  90896 cgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgt 90819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 99944 - 99880
Alignment:
Q  22 acacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||||||||||  |||||| ||| ||||||| ||||||||| | |||||| |||||| ||||    
T  99944 acacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtccgtgt 99880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 225274 - 225351
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    |||||| |||||||||  || ||| ||| ||||||||||||||||| | |||||||| |||||||||  |||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgt 225351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 28904 - 28836
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    |||||||||||||||||  |||||| || |||||||| ||||||||| | |||||||| ||| ||||||    
T  28904 ccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgtt 28836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 26446 - 26348
Alignment:
Q  20 cgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtc--gtgttcgtattcgtgcttcataga 117  Q
    ||||||||||||  ||  |||||| ||||||||||||||||||||||  |||||| | ||||| ||| ||||||  |||| |||| ||||||||||||||    
T  26446 cgacacatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtctagtgtccgta-tcgtgcttcataga 26348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 46726 - 46658
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| ||||||||| ||||||||||| | |||||||| ||||| |||  |||||||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgt 46658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 6366 - 6312
Alignment:
Q  19 ccgacacatataattaccctgaattctgtgattttctcaaattattagcagtgtc 73  Q
    |||||||||||||||||  |||||| ||  ||||| |||||||||||||||||||    
T  6366 ccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 19619 - 19542
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgttcgtattcgt 107  Q
    ||||||| ||||||| ||||||||| ||||||||||||  || ||||| |||||||||  ||||||||| ||| |||||    
T  19619 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccgtgttcgt 19542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 8824 - 8774
Alignment:
Q  47 tgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||||||||| |||||||| |||||||||  |||||||||    
T  8824 tgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 8774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 178833 - 178902
Alignment:
Q  29 taattaccctgaattctg-tgattttctcaaattattagcagtgtcggcatgtcagtgtttgtgtcgtgt 97  Q
    ||||||| ||||||| || ||||||| ||||||||||||  |||||||| |||||||||  |||||||||    
T  178833 taattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgt 178902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 192264 - 192321
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| | ||||| ||| ||||||||||||||||| | |||||||| |||||||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgt 192321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 8660 - 8708
Alignment:
Q  39 gaattctgtgattttctcaaattattagcagtgtcggcatgtcagtgtt 87  Q
    ||||| |||||| || ||||||||||||  |||||||||||||||||||    
T  8660 gaattatgtgatattttcaaattattagttgtgtcggcatgtcagtgtt 8708  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 14574 - 14522
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||| ||||||| ||||||||| ||||||||||||  |||||||| ||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 33378 - 33430
Alignment:
Q  29 taattaccctgaattctgtgattttctcaaattattagcagtgtcggcatgtc 81  Q
    ||||||| ||||||| ||| ||||| ||||||||||||| |||||||| ||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 71769 - 71710
Alignment:
Q  29 taattaccctgaattctgtgattttct--caaattattagcagtgtcggcatgtcagtgt 86  Q
    ||||||| ||||||| ||||||||| |  |||||||||||| |||||||| |||||||||    
T  71769 taattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgt 71710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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