View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6453A_low_223 (Length: 203)
Name: NF6453A_low_223
Description: NF6453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6453A_low_223 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 32096357 - 32096523
Alignment:
| Q |
23 |
aacattaccataacatcaagcaacaatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaa |
122 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32096357 |
aacattaccataacgtcaagcaacaatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaa |
32096456 |
T |
|
| Q |
123 |
cctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttcatatc |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
32096457 |
cctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttcttatc |
32096523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University