View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6453A_low_66 (Length: 305)
Name: NF6453A_low_66
Description: NF6453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6453A_low_66 |
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Alignment Details
Target: chr6 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 3114229 - 3113941
Alignment:
| Q |
1 |
tcagggataaaatctacaataagtctccctgcattaaaatgacaaaaatatctgtaagagggaaaaaaggtaatctgaaaaatttggaagattttaaaat |
100 |
Q |
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| T |
3114229 |
tcagggataaaatctacaataagtctccctgcattaaaatgacaaaaatatctgtaagagggaaaaaaggtaatctgaaaaatttggaagattttaaaat |
3114130 |
T |
|
| Q |
101 |
tgagaaagtattcagttgaatgaaaatcatttaaaatcatagcaaaagttacgaatcaagagctatatagcagacattgatttgtaaatgtatagaaatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
3114129 |
tgagaaagtattcagttgaatgaaaatcatttaaaatcatagcaaaagttacgaatcaagagctatatagcagacattgatttataaatgtatagaaatt |
3114030 |
T |
|
| Q |
201 |
ttaaactagcataattcaaaaccaatatttcatacaggaattcatttcaatcagtgttgttaatcactaatcgcagaaaatactgtttt |
289 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3114029 |
ttaaactagcataattcaaaaccaatatttcatacaagaattcatttcaatcagtgttgttaatcactaatcgcagaaaatactgtttt |
3113941 |
T |
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