View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6453_high_6 (Length: 433)
Name: NF6453_high_6
Description: NF6453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6453_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 17 - 421
Target Start/End: Original strand, 25337063 - 25337465
Alignment:
| Q |
17 |
aaattctacacttgacaactttttnnnnnnntccacataattacagtttaaaagattgcattcttaatacataagcaaattaaaattttaaaaacaaatt |
116 |
Q |
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|||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25337063 |
aaattctacactcgacaactttataaaaaaatccacataattacagtttaaaagattgcattcttaatacataagcaaattaaaattttaaaaacaaatt |
25337162 |
T |
|
| Q |
117 |
attttatactctaactcaaattgtcacttatatgaatcatgatattatatccactacaaatgctacaaaatgattcattcaaattctagacatttgattt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25337163 |
attttatactctaactcaaattgtcacttatatgaatcatgatattatatccactacaaatgctacaaaatgattcattcaaattctagacatttgattt |
25337262 |
T |
|
| Q |
217 |
ataatgtttgtgagccataccttgctttggtcatgtatattaaaaagtatagtagcaaaaagtggaattttgtataataatcatttctgacaaacatata |
316 |
Q |
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| T |
25337263 |
ataatgtttgtgagccataccttgc-ttggtcatgtatattaaaaagtatagtagcaaaaagtggaattttgtataataatcatttctgacaaacatata |
25337361 |
T |
|
| Q |
317 |
ctagatgatgaaatgaaaagatctatggaatattcaacatgtcttggtatatatatttcccacatgataaataatgattctacatgatgtaaccctttca |
416 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
25337362 |
ctagatgatgaaatgaaaagatctatggaatattcaacatgtcttggtatatatatttcccacatgataaataat-attctacatgatgtaaccctttca |
25337460 |
T |
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| Q |
417 |
tctca |
421 |
Q |
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|||| |
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| T |
25337461 |
actca |
25337465 |
T |
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