View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6453_low_25 (Length: 204)
Name: NF6453_low_25
Description: NF6453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6453_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 1617266 - 1617138
Alignment:
| Q |
53 |
tgtcgtgcacttcaacattttccttcccgaatatacgatatgttcagatatgaaaatgggggaaagtggaaagtaaaattgtacttgaaagtgtgattac |
152 |
Q |
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| T |
1617266 |
tgtcgtgcacttcaacattttccttcccgaatatacgatatgttcatatatgaaaatgggggaaagtggaaaataaaattgtacttgcaagtgtgattac |
1617167 |
T |
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| Q |
153 |
tttgccc---tcatctacccatgcaagga |
178 |
Q |
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| T |
1617166 |
tttgccctgatcatctacccatgcaagga |
1617138 |
T |
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