View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6455_low_3 (Length: 248)

Name: NF6455_low_3
Description: NF6455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6455_low_3
NF6455_low_3
[»] chr5 (15 HSPs)
chr5 (4-154)||(892579-892729)
chr5 (148-248)||(892315-892415)
chr5 (45-153)||(13654538-13654645)
chr5 (120-153)||(38394461-38394494)
chr5 (45-153)||(1098657-1098764)
chr5 (47-151)||(19087809-19087912)
chr5 (48-103)||(40736185-40736240)
chr5 (80-153)||(919675-919748)
chr5 (120-153)||(3814053-3814086)
chr5 (120-153)||(13789814-13789847)
chr5 (124-153)||(22398127-22398156)
chr5 (48-93)||(37514250-37514295)
chr5 (48-92)||(7065675-7065719)
chr5 (45-101)||(12646585-12646641)
chr5 (49-153)||(29486505-29486609)
[»] chr4 (16 HSPs)
chr4 (45-153)||(22235289-22235397)
chr4 (45-153)||(32125367-32125475)
chr4 (48-154)||(52673604-52673710)
chr4 (81-150)||(32645533-32645602)
chr4 (47-151)||(37255713-37255816)
chr4 (37-93)||(56257424-56257480)
chr4 (45-92)||(12596679-12596726)
chr4 (95-153)||(24100792-24100850)
chr4 (48-153)||(27990279-27990387)
chr4 (124-153)||(24100890-24100919)
chr4 (124-153)||(39993124-39993153)
chr4 (80-153)||(47943760-47943833)
chr4 (49-154)||(51313474-51313578)
chr4 (124-153)||(53225730-53225759)
chr4 (45-101)||(38381979-38382035)
chr4 (95-151)||(45828472-45828528)
[»] chr3 (15 HSPs)
chr3 (60-154)||(32711234-32711328)
chr3 (57-154)||(32711221-32711318)
chr3 (46-117)||(8036540-8036611)
chr3 (55-154)||(29290795-29290893)
chr3 (79-154)||(29290810-29290885)
chr3 (55-153)||(53441924-53442022)
chr3 (55-153)||(54537460-54537558)
chr3 (36-117)||(2312986-2313067)
chr3 (120-153)||(21662919-21662952)
chr3 (124-153)||(48643690-48643719)
chr3 (113-153)||(28406500-28406540)
chr3 (113-153)||(31836482-31836522)
chr3 (83-151)||(43334624-43334692)
chr3 (83-151)||(48593187-48593255)
chr3 (54-118)||(52168434-52168498)
[»] chr1 (10 HSPs)
chr1 (37-150)||(36141669-36141782)
chr1 (47-152)||(8352140-8352245)
chr1 (49-101)||(19580191-19580243)
chr1 (45-153)||(38834614-38834722)
chr1 (96-151)||(50105691-50105746)
chr1 (79-153)||(50155339-50155413)
chr1 (45-150)||(15351718-15351823)
chr1 (38-87)||(42074129-42074178)
chr1 (37-101)||(5431421-5431485)
chr1 (55-151)||(49944850-49944946)
[»] chr8 (18 HSPs)
chr8 (46-106)||(13841852-13841912)
chr8 (47-151)||(13964424-13964528)
chr8 (54-153)||(2627203-2627302)
chr8 (120-153)||(10839796-10839829)
chr8 (47-153)||(27988084-27988190)
chr8 (47-153)||(28045386-28045492)
chr8 (63-153)||(3236355-3236445)
chr8 (55-153)||(7693050-7693148)
chr8 (80-150)||(8793755-8793825)
chr8 (80-150)||(24619000-24619070)
chr8 (45-86)||(13496531-13496572)
chr8 (80-153)||(27789321-27789394)
chr8 (124-153)||(43932135-43932164)
chr8 (113-153)||(9503613-9503653)
chr8 (52-92)||(11388517-11388557)
chr8 (124-152)||(27871022-27871050)
chr8 (124-152)||(27976808-27976836)
chr8 (124-152)||(28034077-28034105)
[»] chr6 (7 HSPs)
chr6 (66-153)||(1158278-1158365)
chr6 (73-152)||(7649833-7649912)
chr6 (49-101)||(15718474-15718526)
chr6 (49-152)||(16120995-16121098)
chr6 (55-153)||(28630770-28630868)
chr6 (125-153)||(2913366-2913394)
chr6 (37-153)||(16120960-16121076)
[»] chr7 (12 HSPs)
chr7 (54-153)||(7456435-7456534)
chr7 (45-153)||(43813128-43813236)
chr7 (48-151)||(35436257-35436360)
chr7 (48-118)||(20559604-20559674)
chr7 (47-153)||(37491278-37491384)
chr7 (120-153)||(2523852-2523885)
chr7 (45-153)||(4132389-4132498)
chr7 (124-153)||(17801464-17801493)
chr7 (124-153)||(29559523-29559552)
chr7 (124-153)||(41088885-41088914)
chr7 (41-101)||(3967786-3967846)
chr7 (54-150)||(38940252-38940347)
[»] chr2 (7 HSPs)
chr2 (40-151)||(8717540-8717651)
chr2 (49-111)||(45472417-45472479)
chr2 (120-153)||(12962738-12962771)
chr2 (124-153)||(25795324-25795353)
chr2 (45-118)||(37109025-37109098)
chr2 (37-141)||(8996794-8996898)
chr2 (113-153)||(12486067-12486107)
[»] scaffold0027 (1 HSPs)
scaffold0027 (124-153)||(5500-5529)


Alignment Details
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 892729 - 892579
Alignment:
Q  4 ataagagattttcattaattcttccaattatattactctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatct 103  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  892729 ataagagattttcattaattcttccaattatattactctcgccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatct 892630  T
Q  104 agtatatagtatagaacaagtacattaattattcaatgaatctaaaaagtg 154  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  892629 agtatatagtatagaacaaatacattaattattcaatgaatctaaaaagtg 892579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 892415 - 892315
Alignment:
Q  148 aaaagtggccggaaggaatattaaacaaatttgcttataagaatggtatatgaataagcatgatttgttacgatttgaaaatcacaaacattcataccta 247  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  892415 aaaagtggccagaaggaatattaaacaaatttgcttataagaatgctatatgaataagcatggtttgttacgatttgaaaatcacaaagattcataccta 892316  T
Q  248 a 248  Q
    |    
T  892315 a 892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 13654645 - 13654538
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaat 144  Q
    |||||||| |||||||||||||||| |||||| ||||||||| |||||  ||||||| |||| |||| ||| || ||  ||||| | ||||| ||||||     
T  13654645 ccggtcactattataagcaaaaattcactttttaaattcattcaataaatgatgtatttagtctata-tatggaccacatacatcatttattgaatgaac 13654547  T
Q  145 ctaaaaagt 153  Q
    |||||||||    
T  13654546 ctaaaaagt 13654538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 38394494 - 38394461
Alignment:
Q  120 caagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||||||    
T  38394494 caagtacattaattattcaatgaatctaaaaagt 38394461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 1098764 - 1098657
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaat 144  Q
    |||||||| ||||||||||||| |||| |||| | ||||||| |||||   |||||| |||| |||| |||||| ||  ||||| | ||||| |||||||    
T  1098764 ccggtcactattataagcaaaagtttattttttagattcatttaataaataatgtatgtagtctata-tatagaccacatacatcatttattgaatgaat 1098666  T
Q  145 ctaaaaagt 153  Q
    |||||||||    
T  1098665 ctaaaaagt 1098657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 19087912 - 19087809
Alignment:
Q  47 ggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatct 146  Q
    ||||||| |||||||||||||| ||||||| |  |||||||||||    |||||| | || |||| ||| |||||| |||||||| |||||||||||| |    
T  19087912 ggtcacatttataagcaaaaatgtactttttaggttcattgaatacataatgtatttggtctata-tattgaacaaatacattaagtattcaatgaatat 19087814  T
Q  147 aaaaa 151  Q
    |||||    
T  19087813 aaaaa 19087809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 40736185 - 40736240
Alignment:
Q  48 gtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatct 103  Q
    ||||| |||||||||||||||  |||||| || ||||||||||||| |||||||||    
T  40736185 gtcactattataagcaaaaatccacttttcaacttcattgaataactgatgtatct 40736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 919748 - 919675
Alignment:
Q  80 attcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||| |||  ||||||||||||||| | |||||| ||| ||||| | ||||| |||||||| |||||||    
T  919748 attcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaaagt 919675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 3814053 - 3814086
Alignment:
Q  120 caagtacattaattattcaatgaatctaaaaagt 153  Q
    |||||||||||||||||||| |||||||||||||    
T  3814053 caagtacattaattattcaacgaatctaaaaagt 3814086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 13789814 - 13789847
Alignment:
Q  120 caagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||| ||||||    
T  13789814 caagtacattaattattcaatgaatctgaaaagt 13789847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 22398127 - 22398156
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  22398127 tacattaattattcaatgaatctaaaaagt 22398156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 37514295 - 37514250
Alignment:
Q  48 gtcacaattataagcaaaaatttacttttaaaattcattgaataac 93  Q
    |||||||||||| ||||||||| |||||| | ||||||||||||||    
T  37514295 gtcacaattatatgcaaaaattaacttttcagattcattgaataac 37514250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 7065719 - 7065675
Alignment:
Q  48 gtcacaattataagcaaaaatttacttttaaaattcattgaataa 92  Q
    |||||| ||||||||||||||  |||||| |||||||||||||||    
T  7065719 gtcacatttataagcaaaaatcaactttttaaattcattgaataa 7065675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 12646641 - 12646585
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtat 101  Q
    ||||||| || ||||||||||||||||||||| | ||||||| |||||  |||||||    
T  12646641 ccggtcataaatataagcaaaaatttactttttagattcatttaataaatgatgtat 12646585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 29486505 - 29486609
Alignment:
Q  49 tcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaa 148  Q
    |||| ||||||||||||| || || ||| | || ||||||||||   ||||||||||| |||  || |||  || || ||||||||||||||| ||||||    
T  29486505 tcactattataagcaaaatttcacattttagatacattgaataattaatgtatctagtttatgataaagactaaatatattaattattcaatgtatctaa 29486604  T
Q  149 aaagt 153  Q
    |||||    
T  29486605 aaagt 29486609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 22235397 - 22235289
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaat 144  Q
    |||||||| |||||||||||||| | || ||| | |||||||||||||| ||||||||| || |||| || ||| ||| || || |||||||||| |||     
T  22235397 ccggtcactattataagcaaaaaatcacattttagattcattgaataactgatgtatctggtttatattaaagatcaaatatatcaattattcaaagaac 22235298  T
Q  145 ctaaaaagt 153  Q
    |||||||||    
T  22235297 ctaaaaagt 22235289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 32125475 - 32125367
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaat 144  Q
    ||||||| | |||||||||||||| ||||||| |  ||||||||||| |  |||||| | || |||| |||| | |||||||||||| |||||||||||     
T  32125475 ccggtcatatttataagcaaaaatctactttttaggttcattgaatatctaatgtatgtggtctataatatataccaagtacattaagtattcaatgaac 32125376  T
Q  145 ctaaaaagt 153  Q
    | |||||||    
T  32125375 caaaaaagt 32125367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 52673604 - 52673710
Alignment:
Q  48 gtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatcta 147  Q
    ||||| ||||||||||||| ||||||||| | ||  |||||||||   ||||||||||| | || ||||| |    |||||||||||||||||| |||||    
T  52673604 gtcactattataagcaaaactttactttttagatatattgaataattaatgtatctagtttttattatagtatggatacattaattattcaatgtatcta 52673703  T
Q  148 aaaagtg 154  Q
    |||||||    
T  52673704 aaaagtg 52673710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 32645533 - 32645602
Alignment:
Q  81 ttcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaa 150  Q
    ||||||||||||| ||||||| |||| |||  ||| || ||| ||||| |||||||||||||||||||||    
T  32645533 ttcattgaataactgatgtatttagtctattatattgaccaaatacatcaattattcaatgaatctaaaa 32645602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 37255816 - 37255713
Alignment:
Q  47 ggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatct 146  Q
    |||||| ||||||||||||| || |||||| ||||||||| |||||   |||||| |||| |||| |||||| ||  ||||| | ||||| |||||||||    
T  37255816 ggtcactattataagcaaaagttcactttttaaattcattcaataaattatgtatgtagtttata-tatagaccacatacatcatttattgaatgaatct 37255718  T
Q  147 aaaaa 151  Q
    |||||    
T  37255717 aaaaa 37255713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 56257480 - 56257424
Alignment:
Q  37 tactctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataac 93  Q
    ||||||| |||||||| |||||||| ||||| |||||||| | ||||||||||||||    
T  56257480 tactctctccggtcactattataagtaaaaagttactttttagattcattgaataac 56257424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 12596679 - 12596726
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataa 92  Q
    |||||||||| |||||||||||||||| |||| ||||||||| |||||    
T  12596679 ccggtcacaaatataagcaaaaatttattttttaaattcatttaataa 12596726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 24100850 - 24100792
Alignment:
Q  95 gatgtatctagtatatagtatagaacaag-tacattaattattcaatgaatctaaaaagt 153  Q
    |||||||||||| |||| | || |||||| ||||||||||||||||||||||||||||||    
T  24100850 gatgtatctagtctatatt-tataacaagatacattaattattcaatgaatctaaaaagt 24100792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 27990279 - 27990387
Alignment:
Q  48 gtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtat---atagtatagaacaagtacattaattattcaatgaat 144  Q
    |||||| ||||||||||||| ||| |||| | |||||||||||| |  |||||| | ||||   ||| ||||||  |||||||| || |||||||||||     
T  27990279 gtcacatttataagcaaaaaattagtttttagattcattgaataccctatgtatttggtatataatactatagactaagtacataaagtattcaatgaac 27990378  T
Q  145 ctaaaaagt 153  Q
    |||||||||    
T  27990379 ctaaaaagt 27990387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 24100890 - 24100919
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  24100890 tacattaattattcaatgaatctaaaaagt 24100919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 39993124 - 39993153
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  39993124 tacattaattattcaatgaatctaaaaagt 39993153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 47943833 - 47943760
Alignment:
Q  80 attcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    |||||||| ||||  ||||||| |||| |||| | || | ||||||||||||||| ||||| ||||||||||||    
T  47943833 attcattgcataaatgatgtatttagtctatattttataccaagtacattaattactcaattaatctaaaaagt 47943760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 51313474 - 51313578
Alignment:
Q  49 tcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaa 148  Q
    ||||| |||||| ||||||| ||||||| |  |||||||||||    |||||| |||| |||| ||| || ||| |||||||| |||| |||||||||||    
T  51313474 tcacatttataaacaaaaatgtactttttagcttcattgaatacataatgtatttagtctata-tattgaccaaatacattaagtattgaatgaatctaa 51313572  T
Q  149 aaagtg 154  Q
    ||||||    
T  51313573 aaagtg 51313578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 53225730 - 53225759
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  53225730 tacattaattattcaatgaatctaaaaagt 53225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 38381979 - 38382035
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtat 101  Q
    |||||||| ||||||||||||||||||| ||| | ||||||||| |||  |||||||    
T  38381979 ccggtcactattataagcaaaaatttacattttagattcattgattaaatgatgtat 38382035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 45828472 - 45828528
Alignment:
Q  95 gatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaa 151  Q
    ||||||| | || |||| |||||| ||| ||||||||||| ||||||||||||||||    
T  45828472 gatgtatttggtttatattatagaccaaatacattaattactcaatgaatctaaaaa 45828528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 32711328 - 32711234
Alignment:
Q  60 agcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagtg 154  Q
    |||||||| | |||||| | |||||||||||||  ||||||||| || |||| |||||  ||| ||||| |||||||||||||| ||||||||||    
T  32711328 agcaaaaaatcactttttagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaacctaaaaagtg 32711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 32711221 - 32711318
Alignment:
Q  57 ataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagtg 154  Q
    ||||||||||| | |||||| |  ||||||||||||  ||||||| | |  |||| |||||| ||  ||||| |||||||||||||||||||||||||    
T  32711221 ataagcaaaaagtcactttttaggttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaatctaaaaagtg 32711318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 8036540 - 8036611
Alignment:
Q  46 cggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatag 117  Q
    ||||||| |||||||||||| ||||| |||| |  ||||||||||||| ||||||| |||| |||| |||||    
T  8036540 cggtcactattataagcaaatatttattttttaggttcattgaataactgatgtatttagtttataatatag 8036611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 29290795 - 29290893
Alignment:
Q  55 ttataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagtg 154  Q
    ||||||| ||||||| |||||| | |||||||||| ||| |||||||||  | |||| ||||||  || ||||| | ||||||||||||| |||||||||    
T  29290795 ttataagaaaaaattcactttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttattcaatgaat-taaaaagtg 29290893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 29290885 - 29290810
Alignment:
Q  79 aattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagtg 154  Q
    |||||||||||||||  |||||| |||| |||| |||||| ||  ||||| | || ||||||||||||||||||||    
T  29290885 aattcattgaataacttatgtatttagtctataatatagatcagatacatcagttgttcaatgaatctaaaaagtg 29290810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 53441924 - 53442022
Alignment:
Q  55 ttataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||| || | |||||||||   |||||||| ||||  ||||||| | ||||| | | || | ||||||||||||||||||||||||| ||||||||    
T  53441924 ttataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattcaatgaatttaaaaagt 53442022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 54537460 - 54537558
Alignment:
Q  55 ttataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||| |||| || |||||||| ||||||||| |||  |||||||||||| || | |||||| ||| ||||  | |||| ||||||||| |||||||    
T  54537460 ttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatgcaatgaatcaaaaaagt 54537558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 2313067 - 2312986
Alignment:
Q  36 ttactctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatag 117  Q
    |||||| | |||||||| ||||||| |||| ||| | |||| |||||||||||||||  |||||||||  |||||| |||||    
T  2313067 ttactcactccggtcactattataatcaaatattcatttttcaaattcattgaataattgatgtatctgatatataatatag 2312986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 21662952 - 21662919
Alignment:
Q  120 caagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||| ||||||||||||||||||    
T  21662952 caagtacattaattactcaatgaatctaaaaagt 21662919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 48643690 - 48643719
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  48643690 tacattaattattcaatgaatctaaaaagt 48643719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 28406540 - 28406500
Alignment:
Q  113 tatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    |||||| ||| |||||||||||||||| |||||||||||||    
T  28406540 tatagaccaaatacattaattattcaacgaatctaaaaagt 28406500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 31836482 - 31836522
Alignment:
Q  113 tatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    |||||| ||| |||||||||||||||||||| |||||||||    
T  31836482 tatagaccaaatacattaattattcaatgaacctaaaaagt 31836522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 43334692 - 43334624
Alignment:
Q  83 cattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaa 151  Q
    ||||||||||| ||| |||||||| |||| ||| || |||  | |||||||||||||| ||||||||||    
T  43334692 cattgaataacagatatatctagtctatattatggaccaaacatattaattattcaataaatctaaaaa 43334624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 48593187 - 48593255
Alignment:
Q  83 cattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaa 151  Q
    ||||||||||  ||||||||  || || | |||||| ||| ||||| ||||||||||||||||||||||    
T  48593187 cattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatctaaaaa 48593255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 52168498 - 52168434
Alignment:
Q  54 attataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtataga 118  Q
    ||||||||  ||||||||||||||| ||||||| |||||  ||||||| || |||||| ||||||    
T  52168498 attataagagaaaatttacttttaagattcattcaataaatgatgtatttaatatatattataga 52168434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 36141669 - 36141782
Alignment:
Q  37 tactctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattatt 136  Q
    ||||||| | |||| |||||||||||||||||| || ||| |||||| || ||||||  |||||| | || | || |||||| ||| |||||||||||||    
T  36141669 tactctctctggtctcaattataagcaaaaattaacattttaaattcctttaataactaatgtatttggtctttattatagatcaaatacattaattatt 36141768  T
Q  137 caatgaatctaaaa 150  Q
     ||||||| |||||    
T  36141769 aaatgaatttaaaa 36141782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 8352140 - 8352245
Alignment:
Q  47 ggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatct 146  Q
    |||||| ||||||||||||| || | |||| | || |||||||| |   ||||||||| ||| || ||||||| || |||||||||||||||||  ||||    
T  8352140 ggtcactattataagcaaaacttcattttttagatacattgaatgattaatgtatctaatatttattatagaataaatacattaattattcaatatatct 8352239  T
Q  147 aaaaag 152  Q
    ||||||    
T  8352240 aaaaag 8352245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 19580191 - 19580243
Alignment:
Q  49 tcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtat 101  Q
    |||| |||||||||||||||| |||||||||||||||| |||||  |||||||    
T  19580191 tcacgattataagcaaaaattgacttttaaaattcattcaataaatgatgtat 19580243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 38834614 - 38834722
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaat 144  Q
    |||||||| |||||||||||||||||| |||| | ||||||| |||||  ||||||| |||| ||||  |  || ||  ||||| | ||||| |||||||    
T  38834614 ccggtcactattataagcaaaaatttattttttagattcattaaataaatgatgtatatagtctatataaatgaccatatacatcatttattgaatgaat 38834713  T
Q  145 ctaaaaagt 153  Q
    |||||||||    
T  38834714 ctaaaaagt 38834722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 50105746 - 50105691
Alignment:
Q  96 atgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaa 151  Q
    ||||||||||| |||| |||||| ||  |||||| |||||||||||||||||||||    
T  50105746 atgtatctagtttatattatagatcagatacattgattattcaatgaatctaaaaa 50105691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 50155339 - 50155413
Alignment:
Q  79 aattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||| ||||  ||||||| | || |||| |||||| ||| ||||| ||||| ||||||||||||||||||    
T  50155339 aattcattgcataaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaatctaaaaagt 50155413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 15351718 - 15351823
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaat 144  Q
    |||||||||| ||||||||||||||||  ||| ||||||||| |||||  ||||||| | || || | || ||| ||  ||||| | ||||| |||||||    
T  15351718 ccggtcacaaatataagcaaaaatttatattttaaattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattgaatgaat 15351817  T
Q  145 ctaaaa 150  Q
    ||||||    
T  15351818 ctaaaa 15351823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 42074129 - 42074178
Alignment:
Q  38 actctccccggtcacaattataagcaaaaatttacttttaaaattcattg 87  Q
    |||||| ||||||| | ||||||||||||| |||||||| ||||||||||    
T  42074129 actctctccggtcatatttataagcaaaaaattactttttaaattcattg 42074178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 5431485 - 5431421
Alignment:
Q  37 tactctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtat 101  Q
    ||||||| |||||||| | |||||||||||||| |||||| | ||||||| |||||  |||||||    
T  5431485 tactctctccggtcactaatataagcaaaaattaactttttagattcattcaataaatgatgtat 5431421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 49944850 - 49944946
Alignment:
Q  55 ttataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaa 151  Q
    ||||||| |||| || |||||| | |||||||||||||  ||||||||| || || | |||||| ||| ||||| | |||| ||||||||| |||||    
T  49944850 ttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatcaaaaaa 49944946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 13841852 - 13841912
Alignment:
Q  46 cggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagt 106  Q
    ||||||| ||||||||||||||||||||||| ||||||||| |||||  ||||||| ||||    
T  13841852 cggtcactattataagcaaaaatttactttttaaattcattcaataaatgatgtatttagt 13841912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 13964424 - 13964528
Alignment:
Q  47 ggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatct 146  Q
    |||||| |||||||||||||||  || ||| ||||||||| |||||  ||||||| | || |||| |||||| || |||||| | ||| |||||||||||    
T  13964424 ggtcactattataagcaaaaatcaacattttaaattcattcaataaatgatgtatgtggtctatattatagaccatgtacatcatttactcaatgaatct 13964523  T
Q  147 aaaaa 151  Q
    |||||    
T  13964524 aaaaa 13964528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 2627302 - 2627203
Alignment:
Q  54 attataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||| |||||||||| |||||| || |||||| |||||  | ||||| |||| |||| ||| || ||| ||||||| ||||| ||||||||||||||||    
T  2627302 attattagcaaaaattaactttttaagttcattcaataaatggtgtatttagtctatattattgaccaaatacattatttattgaatgaatctaaaaagt 2627203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 10839829 - 10839796
Alignment:
Q  120 caagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||||||    
T  10839829 caagtacattaattattcaatgaatctaaaaagt 10839796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 27988084 - 27988190
Alignment:
Q  47 ggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaac-aagtacattaattattcaatgaatc 145  Q
    ||||||| |||||||||||||   |||||| || ||||||||||||   |||||||| || ||||  ||  ||| || ||||||||||||||||||||||    
T  27988084 ggtcacatttataagcaaaaaacaactttttaagttcattgaataagtaatgtatctcgtttataa-atttaactaaatacattaattattcaatgaatc 27988182  T
Q  146 taaaaagt 153  Q
    ||||||||    
T  27988183 taaaaagt 27988190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 28045386 - 28045492
Alignment:
Q  47 ggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaac-aagtacattaattattcaatgaatc 145  Q
    ||||||| |||||||||||||   |||||| || ||||||||||||   |||||||| || ||||  ||  ||| || ||||||||||||||||||||||    
T  28045386 ggtcacatttataagcaaaaaacaactttttaagttcattgaataagtaatgtatctcgtttataa-atttaactaaatacattaattattcaatgaatc 28045484  T
Q  146 taaaaagt 153  Q
    ||||||||    
T  28045485 taaaaagt 28045492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 3236355 - 3236445
Alignment:
Q  63 aaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||| |||||| |||||||||||||||  |||||||||||| || | | |||| ||| ||||| | |||| ||||||||  |||||||    
T  3236355 aaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatgaattaaaaaagt 3236445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 7693050 - 7693148
Alignment:
Q  55 ttataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||| || | |||||||||   |||||||| ||||  ||||||| |||| |||| | || | ||| ||||||||||| ||||||||||||||||||    
T  7693050 ttataagaaacattttacttttttgattcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaaaagt 7693148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 8793825 - 8793755
Alignment:
Q  80 attcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaa 150  Q
    |||||||| ||||  ||||||| |||| |||| |||||| ||| ||||| ||||| |||||||||||||||    
T  8793825 attcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaatctaaaa 8793755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 24619000 - 24619070
Alignment:
Q  80 attcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaa 150  Q
    |||||||| ||||  ||||||| | || |||| | || ||||||||||||||||| |||||||||||||||    
T  24619000 attcattgcataaatgatgtatttggtctatattctataacaagtacattaattactcaatgaatctaaaa 24619070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 13496572 - 13496531
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcatt 86  Q
    |||||||| ||||||||||||||||||| ||| |||||||||    
T  13496572 ccggtcactattataagcaaaaatttacattttaaattcatt 13496531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 27789321 - 27789394
Alignment:
Q  80 attcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    |||||||||||||  ||||||||| ||||||| ||| || ||| ||||| | ||||||||||||| ||| ||||    
T  27789321 attcattgaataattgatgtatctggtatataatattgaccaaatacatcagttattcaatgaatgtaacaagt 27789394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 43932135 - 43932164
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  43932135 tacattaattattcaatgaatctaaaaagt 43932164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 9503613 - 9503653
Alignment:
Q  113 tatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    |||||| ||| |||||||| |||||||||||||||||||||    
T  9503613 tatagaccaaatacattaaatattcaatgaatctaaaaagt 9503653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 11388517 - 11388557
Alignment:
Q  52 caattataagcaaaaatttacttttaaaattcattgaataa 92  Q
    ||||||||||||||||||||||||| | ||||||| |||||    
T  11388517 caattataagcaaaaatttactttttatattcattaaataa 11388557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 152
Target Start/End: Original strand, 27871022 - 27871050
Alignment:
Q  124 tacattaattattcaatgaatctaaaaag 152  Q
    |||||||||||||||||||||||||||||    
T  27871022 tacattaattattcaatgaatctaaaaag 27871050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 152
Target Start/End: Original strand, 27976808 - 27976836
Alignment:
Q  124 tacattaattattcaatgaatctaaaaag 152  Q
    |||||||||||||||||||||||||||||    
T  27976808 tacattaattattcaatgaatctaaaaag 27976836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 152
Target Start/End: Original strand, 28034077 - 28034105
Alignment:
Q  124 tacattaattattcaatgaatctaaaaag 152  Q
    |||||||||||||||||||||||||||||    
T  28034077 tacattaattattcaatgaatctaaaaag 28034105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 1158365 - 1158278
Alignment:
Q  66 aatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    |||| |||||| |||| ||||||||||  ||||||| | || || | |||||| | | ||||||||||||||||||||||||||||||    
T  1158365 aattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacattaattattcaatgaatctaaaaagt 1158278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 7649912 - 7649833
Alignment:
Q  73 ttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaag 152  Q
    |||| |||||||||||||||  ||| ||| | ||||||| | |||| ||| ||||| |||||||||||||||||||||||    
T  7649912 tttttaaattcattgaataattgatttatttggtatatattttagaccaaatacatcaattattcaatgaatctaaaaag 7649833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 15718526 - 15718474
Alignment:
Q  49 tcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtat 101  Q
    |||| |||||||||||||||| |||||||||||||||| |||||  |||||||    
T  15718526 tcactattataagcaaaaattcacttttaaaattcattcaataaatgatgtat 15718474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 16121098 - 16120995
Alignment:
Q  49 tcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaa 148  Q
    |||| |||||||||||||||  |||||| | ||||||| |||||  ||||||| | ||  ||| |||||| ||||||||| | ||||| ||||||| |||    
T  16121098 tcactattataagcaaaaatcaactttttagattcattaaataaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatgaatttaa 16120999  T
Q  149 aaag 152  Q
    ||||    
T  16120998 aaag 16120995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 28630770 - 28630868
Alignment:
Q  55 ttataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||| |||| || ||||||   ||||||||| |||  ||||||||| || |||| |||||| ||| ||||| | |||| |||||||||||||||||    
T  28630770 ttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatctaaaaagt 28630868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 2913394 - 2913366
Alignment:
Q  125 acattaattattcaatgaatctaaaaagt 153  Q
    |||||||||||||||||||||||||||||    
T  2913394 acattaattattcaatgaatctaaaaagt 2913366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 16120960 - 16121076
Alignment:
Q  37 tactctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattatt 136  Q
    |||||||  ||||||| |||||||| |||| ||  ||||| ||||||||| |||||  ||||||  | || |||| ||| || ||| ||||| | |||||    
T  16120960 tactctcttcggtcactattataagtaaaagttatctttttaaattcattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatt 16121059  T
Q  137 caatgaatctaaaaagt 153  Q
     ||||||||||||||||    
T  16121060 taatgaatctaaaaagt 16121076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 7456435 - 7456534
Alignment:
Q  54 attataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaag-tacattaattattcaatgaatctaaaaag 152  Q
    |||||||| || | || |||||| | |||||||| ||||  |||||||||||| |||| | || |||||| ||||||||||| |||||||||||||||||    
T  7456435 attataagaaatatttgactttttagattcattgtataaatgatgtatctagtctatatt-tacaacaagatacattaattactcaatgaatctaaaaag 7456533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 43813128 - 43813236
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaat 144  Q
    |||||||| |||||||||||||||||| |||| | ||||||| |||||  || |||| |||| |||| ||| || ||  ||||| | ||||| |||||||    
T  43813128 ccggtcactattataagcaaaaatttaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaat 43813227  T
Q  145 ctaaaaagt 153  Q
    |||| ||||    
T  43813228 ctaagaagt 43813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 35436360 - 35436257
Alignment:
Q  48 gtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatcta 147  Q
    ||||| |||||||| |||||   |||||| |  ||||||||||||  ||||||||||||||||| ||| || ||  ||||| | |||||||||||| |||    
T  35436360 gtcactattataagtaaaaaaccactttttaggttcattgaataattgatgtatctagtatataatattgaccagatacataagttattcaatgaaccta 35436261  T
Q  148 aaaa 151  Q
    ||||    
T  35436260 aaaa 35436257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 20559604 - 20559674
Alignment:
Q  48 gtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtataga 118  Q
    ||||| ||||||| |||| | | |||||| |||||||||||||||| ||||||| | ||||||| ||||||    
T  20559604 gtcactattataaacaaataatcactttttaaattcattgaataactgatgtattttgtatataatataga 20559674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 37491278 - 37491384
Alignment:
Q  47 ggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatct 146  Q
    |||||| ||||||||||||||||||||||| | ||| ||| |||||  ||||||| |||| ||||  |  || ||  ||||| | ||||| |||||||||    
T  37491278 ggtcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgtagtctatataagtgaccatatacatcatttattaaatgaatct 37491377  T
Q  147 aaaaagt 153  Q
    |||||||    
T  37491378 aaaaagt 37491384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 2523852 - 2523885
Alignment:
Q  120 caagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||| ||||||||||||||||||    
T  2523852 caagtacattaattactcaatgaatctaaaaagt 2523885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 4132389 - 4132498
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaa-attcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaa 143  Q
    |||||||  ||||||||||||| || ||||||  | || ||||||||||   |||||| |||||| || ||||||  || |||||||| ||||||||| |    
T  4132389 ccggtcaatattataagcaaaatttcacttttttagatacattgaataattaatgtatatagtatttattatagactaaatacattaaatattcaatgta 4132488  T
Q  144 tctaaaaagt 153  Q
    ||||||||||    
T  4132489 tctaaaaagt 4132498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 17801464 - 17801493
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  17801464 tacattaattattcaatgaatctaaaaagt 17801493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 29559523 - 29559552
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  29559523 tacattaattattcaatgaatctaaaaagt 29559552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 41088914 - 41088885
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  41088914 tacattaattattcaatgaatctaaaaagt 41088885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 3967846 - 3967786
Alignment:
Q  41 ctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtat 101  Q
    |||||||||||| ||||||||||||||  ||||||| |  ||||||||||||  |||||||    
T  3967846 ctccccggtcactattataagcaaaaaactactttttaggttcattgaataaatgatgtat 3967786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 38940347 - 38940252
Alignment:
Q  54 attataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaatgaatctaaaa 150  Q
    |||||||  ||||||| |||||| ||||||||| |||||  ||||||| |||| |||| |||||| ||  | ||||| ||||| |||||||||||||    
T  38940347 attataattaaaaattcactttttaaattcatttaataaatgatgtatgtagtctata-tatagaccacattcattatttattgaatgaatctaaaa 38940252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 8717651 - 8717540
Alignment:
Q  40 tctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattattcaa 139  Q
    |||| ||| |||| ||||||||  ||| || | |||| |||| ||||||||||   |||||||||||||||| || |||  || ||||||||||||| ||    
T  8717651 tctctccgatcactattataagttaaatttaattttttaaatacattgaataaataatgtatctagtatataataaagactaaatacattaattatttaa 8717552  T
Q  140 tgaatctaaaaa 151  Q
    || |||||||||    
T  8717551 tgtatctaaaaa 8717540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 45472417 - 45472479
Alignment:
Q  49 tcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatata 111  Q
    |||| |||||||| |||||||||||||| ||||||||| |||||  ||||||| |||| ||||    
T  45472417 tcactattataagtaaaaatttactttttaaattcattcaataaatgatgtatgtagtctata 45472479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 12962771 - 12962738
Alignment:
Q  120 caagtacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||| ||||||||||||||||||    
T  12962771 caagtacattaattactcaatgaatctaaaaagt 12962738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 25795324 - 25795353
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  25795324 tacattaattattcaatgaatctaaaaagt 25795353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 37109098 - 37109025
Alignment:
Q  45 ccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtataga 118  Q
    |||||||| ||||||| |||||||| | | || |||||||||||| ||| ||||||| |||| |||| ||||||    
T  37109098 ccggtcactattataaacaaaaattcaatatttaaattcattgaagaactgatgtatttagtctataatataga 37109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 8996898 - 8996794
Alignment:
Q  37 tactctccccggtcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaagtacattaattatt 136  Q
    ||||||| |||||||| ||||||||||||| | ||||||  | || ||||||||||   |||||| |||| | || ||||||  |  |||||||||||||    
T  8996898 tactctctccggtcactattataagcaaaactctactttctagatacattgaataatcaatgtatatagtctttattatagactagatacattaattatt 8996799  T
Q  137 caatg 141  Q
    |||||    
T  8996798 caatg 8996794  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 12486067 - 12486107
Alignment:
Q  113 tatagaacaagtacattaattattcaatgaatctaaaaagt 153  Q
    |||||| ||| ||||| ||||||||||||||||||||||||    
T  12486067 tatagaccaaatacatcaattattcaatgaatctaaaaagt 12486107  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 5500 - 5529
Alignment:
Q  124 tacattaattattcaatgaatctaaaaagt 153  Q
    ||||||||||||||||||||||||||||||    
T  5500 tacattaattattcaatgaatctaaaaagt 5529  T

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