View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6457_high_6 (Length: 303)
Name: NF6457_high_6
Description: NF6457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6457_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 36588427 - 36588133
Alignment:
| Q |
1 |
ctactattcggtgtggtatagctgaaccatctggtgaacctgctcctttaggacaaaagacacgttacgatgacagtatttttgagaaggttttcatgac |
100 |
Q |
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| T |
36588427 |
ctaccattcggtgtggtatagctgaaccatctggtgaaccagctcctttaggacaaaagacacgttacaatgacagtatttttgagaaggttttcatgac |
36588328 |
T |
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| Q |
101 |
tttgtttgcacgaaaaatggaaccatttgcagagcctgtaatagggaatgctaaaaagaagaaggaaaagaaaggttggttggatatttgggagtatgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| |
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| T |
36588327 |
tttgtttgcacgaaaaatggaaccatttgcagagcctgtaatagggaatgctaaaaagaagaaggaaaagaagggtttgttggatgtttgggagtatgat |
36588228 |
T |
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| Q |
201 |
tatgagagttttgtggatgtgtcgaaaagagtaatgttgcgtcggtctcgtttgcagcaacaacaagttgttcgtgaagttcttcttcctatgct |
295 |
Q |
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|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| |
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| T |
36588227 |
tatgagagttttgttgatgtgtccaaaagagtaatgttgcgtcggtctcgtttgcagcaacagcaagttgttcgtgaggttcttctttctatgct |
36588133 |
T |
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