View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6458_low_7 (Length: 308)
Name: NF6458_low_7
Description: NF6458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6458_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 32777826 - 32777537
Alignment:
| Q |
13 |
aaaatagtagtagtaacttgtaacattgaagtgataaacgatgttgcatgcatgcatacatttatgtatcctttgtgggcaaagtgcatacaataatgct |
112 |
Q |
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| T |
32777826 |
aaaatagtagttgtaacttgtaacattgaagtgataaacgatgttgcatgcatgcatacatttatgtatcctttgtgggcaaagtgcatacaataatgct |
32777727 |
T |
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| Q |
113 |
ttggtttctcaatc---aaacacattcaaaatttgtctattttaaagatgaatttttattaacacaagcttgtaatggattctatgaccacacatttaag |
209 |
Q |
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| T |
32777726 |
ttggtttctcaattcttaaacacattaaaaatttgtctattttaaagatgaattttcattaaaacaagcttgtaatggattctatgaccacacatttaag |
32777627 |
T |
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| Q |
210 |
ggacccctaattacttacatctccaatatataccaattcatatgctatacaattaggatgcctaataaaagac--tatgatgttgcatat |
297 |
Q |
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| T |
32777626 |
ggacccctaattacttacatctccaatatataccaattcatatgctatacaattaggatgcctaataaaagactatatgatgttgcatat |
32777537 |
T |
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